Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0007142

Physical Location & Seq

Genomic Coordinates Forward (+)

1861467 .. 1863404

Gene Structure 1938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026280

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGCTCTCTCCAAACCTTCCTTTCTCACCCACCTCAAAACCCTAGCCAAACCCCCCCACCGCCTCCGCCGCCTCACACCCCCCTCATTCCTCTCTCTGCGCTCCCTCTCCTTCGCCACCCCCGAAGACGCCGCCGCCGACCGCCGCCGCCGCAAGCGCCGCCTCCGCATCGAACCCCCAATCTCCCCCCTCCACCGCTCCCAACAACAACAACAACAACCCCCAAAACCCCAAAACCCTAACCCTAACCCTAACGCCCCCAAGCTCCCGGAACCCGTCTCCGCTCTCTCCGGCAACCGCCTCAACCTCCACAACAAAATCCTCACCCTAATCCGCCGCAACGACCTCGAAGAAGCCGCCCTCTACACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCATCTACACCGTCAACTCCGTCCTCGCCGCCCAGCTCCGCCAGTCCAAGTACTCCGATCTCCTCTCCCTCCACCGCTTCATCACCCAGGCCGGCGTCGCCCCCAACATCGTCACCCACAACCTCATCTTCCAGACCTATCTCGACTGCCGGAAACCCGATACTGCTATGGAGCATTACAAGCAGCTCATCAACGACGCGCCGTTTAATCCTTCTCCGACGACGTACCGGATTCTTATCAAAGGGTTGGTGGACAATGGCAAGCTGGAGAGGGCCATGGAGCTGAAGGAGGAGATGGTTGATGTGAAGGGTTTCGAGCCGGACCCGGTTGTGTATCATTATCTGATGGTGGGGTGTGTGAGGAATTCGGATTCGGATGGGGTGTTTCGGCTTTACGAGGAGTTGAAGGAGAAGTTGGGAGGGGAGGTGGAGGATGGGGTTGTGTTTGGGAGTTTGATGAAGGGGTATTTCATGAAGGAAATGGAGAAGGAGGCAATGGAGTGTTATGAACAGGCTTCGAAGGTGAAGATGAATGCGGTGGCGTATAACTCGGTTTTGGAGGCTTTGTGTGGGTATGGGAAGTTTGATGAGGCGTTGAATTTGTTTGATAGGATGAGGGAGGAGCATTCCCCACCGAGGAGGTTTACGGTGAATTTGGGGAGCTTTAATGTGATGGCGGACGGGTATTGTGCGCAGGGGAGGTTTAAGGAGGCTGTTGAGGTTTTCAGGAAGATGGGGGAGTGTAGATGTGACCCGGATACGTTGTCGTTTAATAATTTGATTCAGCATTTGTGTAGCAATGGGATGCTGAGTGAGGCTGAGGAGGTTTATGGGGAAATGGGGGAGAAGGGAGTGAACCCGGATGAGTATACTTACTCTTTGTTGATGGATACTTGTTTTGAGGAGAATAGGCCTGATGATGCGGCTGAGTATTTTAGGAAAATGGTGGATGAGAAGTTGAGGCCGAATTTGGCTGTTTATAATAGGTTGGCTGATGGGTTGGTTAAGGTGGGGAAGGTTGATGAGGCGAAGTCCTTTTTTGATCTTATGGGGAAGAAGCTGAAGATGGATGTTGTGAGCTATCAGTTTATAATGAAGGCATTAAGTGATGCAGGGAAATTCGATGAGGTGCTTAATGTGGTGGATACATTGTTGGAGGACGAATGGATTGAATTGAATGAGGAGTTGCAGGAGTTCATCAAAGGGGAGCTGAGAAAGGATGGGAGAGAGGATGAATTGGGAAGGCTGATAGAGGAGAAGGAAAGGCTGAAGGCTGAGGCCAAGGCGAAGGAGATTGAGGAAGCAGAAGCAGCAAAGAGAAGTAGAAGTGCTGCTGTCTCCTCGTTACTTCCGTCTAGTTTGTTTGGGAAGAAAGAGACAGGGTCTACAGGGGCCACTGAAAAAGTAGGTGAAGCTGCCTCAGCTTCTGTGGAGGCTGCTCCAGCTGCTGACACGAACTCGGCAGAGCAAGCAGTCAAAGGTGAAAGTTCAGATGAAGAATCCAAAAGCGAGGGTGCAAACGAGCAGGTAGTGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0016070 GO:0016787 GO:0016788 GO:0017076 GO:0019222 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0035639 GO:0036094 GO:0040029 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

646

Amino Acids

72.62

Weight (kDa)

5.55

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	205 - 253	4.7e-07	PPR repeat family
PPR_2	PF13041	311 - 350	4.4e-07	PPR repeat family
PPR	PF01535	313 - 341	5.3e-06	PPR repeat
PPR_2	PF13041	353 - 391	4.2e-07	PPR repeat family
PPR	PF01535	354 - 383	1.2e-06	PPR repeat
PPR_1	PF12854	383 - 413	1.8e-06	PPR repeat
PPR_2	PF13041	385 - 432	4e-15	PPR repeat family
PPR	PF01535	389 - 418	1.9e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49240
fragaria_vesca	FvH4_2g09580
malus_domestica	MD07G1288700.v1.1
prunus_persica	Prupe.2G310200_v2.0.a1
pyrus_communis	pycom01g22880
rosa_chinensis	RchiOBHm_Chr1g0380631
rosa_laevigata	RLG00000026280
rosa_multiflora	Rmu_sc0004647.1_g000010 Rmu_sc0020141.1_g000001 Rmu_sc0020141.1_g000002 Rmu_sc0021483.1_g000003 Rmu_ssc0000015.1_g000013
rosa_roxburghii	Rroxscaffold_4G00279120
rosa_rugosa	Rorug01G0122900 Rorug01G0423100
rosa_samantha	Rh1AG447400 Rh1BG113000 Rh1BG151000 Rh1BG402900 Rh1CG417300 Rh1DG182800 Rh1DG433200 Rh7CG247500
rosa_wichuraiana	Rw1G038940 Rw7G019950

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1380, 1490
Acc16I	TGCGCA	1 cut(s)	1092
Acc36I	ACCTGC	1 cut(s)	1915
AccBSI	CCGCTC	2 cut(s)	198, 284
AccI	GTMKAC	2 cut(s)	1268, 1784
AccII	CGCG	1 cut(s)	599
AcsI	RAATTY	5 cut(s)	763, 997, 1051, 1366, 1517
AcuI	CTGAAG	3 cut(s)	704, 1481, 1688
AcyI	GRCGYC	2 cut(s)	129, 495
AfaI	GTAC	2 cut(s)	452, 626
AfiI	CCNNNNNNNGG	1 cut(s)	1035
AgsI	TTSAA	4 cut(s)	805, 997, 1571, 1576
AjnI	CCWGG	1 cut(s)	486
AjuI	GAANNNNNNNTTGG	2 cut(s)	797, 829
Alw26I	GTCTC	3 cut(s)	283, 1741, 1769
AlwNI	CAGNNNCTG	2 cut(s)	1826, 1847
AoxI	GGCC	6 cut(s)	489, 672, 1310, 1361, 1677, 1791
ApeKI	GCWGC	6 cut(s)	583, 1709, 1730, 1814, 1835, 1844
ApoI	RAATTY	5 cut(s)	763, 997, 1051, 1366, 1517
Asp700I	GAANNNNTTC	1 cut(s)	710
AspLEI	GCGC	4 cut(s)	102, 159, 601, 1093
AspS9I	GGNCC	3 cut(s)	672, 721, 1791
AsuC2I	CCSGG	4 cut(s)	269, 725, 1154, 1259
AsuHPI	GGTGA	8 cut(s)	19, 316, 475, 505, 934, 1060, 1820, 1892
AsuII	TTCGAA	1 cut(s)	917
AvaII	GGWCC	1 cut(s)	721
BbsI	GAAGAC	1 cut(s)	132
BbvCI	CCTCAGC	3 cut(s)	1218, 1674, 1819
BbvI	GCAGC	6 cut(s)	595, 1717, 1721, 1801, 1822, 1831
BceAI	ACGGC	1 cut(s)	586
BcgI	CGANNNNNNTGC	2 cut(s)	328, 362
BciT130I	CCWGG	1 cut(s)	488
BciVI	GTATCC	3 cut(s)	1150, 1282, 1537
BcnI	CCSGG	4 cut(s)	269, 725, 1154, 1259
BcoDI	GTCTC	3 cut(s)	283, 1741, 1769
BfaI	CTAG	2 cut(s)	44, 1755
BfmI	CTRYAG	1 cut(s)	1785
BfoI	RGCGCY	1 cut(s)	160
BfuAI	ACCTGC	1 cut(s)	1915
BfuI	GTATCC	3 cut(s)	1150, 1282, 1537
BmcAI	AGTACT	1 cut(s)	452
Bme1390I	CCNGG	5 cut(s)	269, 488, 725, 1154, 1259
Bme18I	GGWCC	1 cut(s)	721
BmgT120I	GGNCC	3 cut(s)	672, 721, 1791
BmiI	GGNNCC	3 cut(s)	273, 723, 1792
BmrFI	CCNGG	5 cut(s)	269, 488, 725, 1154, 1259
BmsI	GCATC	4 cut(s)	177, 1194, 1309, 1498
BpiI	GAAGAC	1 cut(s)	132
BpmI	CTGGAG	2 cut(s)	686, 1824
Bpu10I	CCTNAGC	3 cut(s)	1218, 1674, 1819
Bpu14I	TTCGAA	1 cut(s)	917
BpuMI	CCSGG	4 cut(s)	269, 725, 1154, 1259
BsaBI	GATNNNNATC	1 cut(s)	635
BsaHI	GRCGYC	2 cut(s)	129, 495
BsaJI	CCNNGG	4 cut(s)	486, 675, 1034, 1680
BsaWI	WCCGGW	1 cut(s)	627
BsaXI	ACNNNNNCTCC	4 cut(s)	810, 840, 950, 980
Bsc4I	CCNNNNNNNGG	1 cut(s)	1035
Bse118I	RCCGGY	1 cut(s)	491
Bse1I	ACTGG	1 cut(s)	442
Bse3DI	GCAATG	2 cut(s)	900, 1204
Bse8I	GATNNNNATC	1 cut(s)	635
BseBI	CCWGG	1 cut(s)	488
BseDI	CCNNGG	4 cut(s)	486, 675, 1034, 1680
BseGI	GGATG	9 cut(s)	781, 838, 1017, 1209, 1267, 1354, 1474, 1624, 1636
BseJI	GATNNNNATC	1 cut(s)	635
BseLI	CCNNNNNNNGG	1 cut(s)	1035
BseMI	GCAATG	2 cut(s)	900, 1204
BseMII	CTCAG	6 cut(s)	1199, 1209, 1317, 1601, 1665, 1833
BseNI	ACTGG	1 cut(s)	442
BseXI	GCAGC	6 cut(s)	595, 1717, 1721, 1801, 1822, 1831
BseYI	CCCAGC	1 cut(s)	432
Bsh1236I	CGCG	1 cut(s)	599
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	6 cut(s)	491, 674, 1312, 1363, 1679, 1793
BsiEI	CGRYCG	1 cut(s)	142
BsiSI	CCGG	9 cut(s)	269, 291, 492, 550, 628, 719, 725, 1154, 1259
BslI	CCNNNNNNNGG	1 cut(s)	1035
BsmAI	GTCTC	3 cut(s)	283, 1741, 1769
BsmBI	CGTCTC	1 cut(s)	283
BsmI	GAATGC	2 cut(s)	937, 1024
BsnI	GGCC	6 cut(s)	491, 674, 1312, 1363, 1679, 1793
Bsp119I	TTCGAA	1 cut(s)	917
Bsp143I	GATC	2 cut(s)	457, 1441
Bsp19I	CCATGG	1 cut(s)	675
BspANI	GGCC	6 cut(s)	491, 674, 1312, 1363, 1679, 1793
BspCNI	CTCAG	6 cut(s)	1200, 1210, 1318, 1602, 1666, 1832
BspFNI	CGCG	1 cut(s)	599
BspHI	TCATGA	1 cut(s)	870
BspLI	GGNNCC	3 cut(s)	273, 723, 1792
BspMI	ACCTGC	1 cut(s)	1915
BspT104I	TTCGAA	1 cut(s)	917
BsrBI	CCGCTC	2 cut(s)	198, 284
BsrDI	GCAATG	2 cut(s)	900, 1204
BsrFI	RCCGGY	1 cut(s)	491
BsrI	ACTGG	1 cut(s)	442
BssAI	RCCGGY	1 cut(s)	491
BssECI	CCNNGG	4 cut(s)	486, 675, 1034, 1680
BssMI	GATC	2 cut(s)	457, 1441
BssNAI	GTATAC	1 cut(s)	1269
BssNI	GRCGYC	2 cut(s)	129, 495
BssT1I	CCWWGG	2 cut(s)	675, 1680
Bst1107I	GTATAC	1 cut(s)	1269
Bst2UI	CCWGG	1 cut(s)	488
Bst4CI	ACNGT	2 cut(s)	412, 1048
BstACI	GRCGYC	2 cut(s)	129, 495
BstBI	TTCGAA	1 cut(s)	917
BstC8I	GCNNGC	4 cut(s)	155, 493, 662, 1869
BstDEI	CTNAG	6 cut(s)	1208, 1218, 1326, 1610, 1674, 1819
BstDSI	CCRYGG	1 cut(s)	675
BstF5I	GGATG	9 cut(s)	781, 838, 1017, 1209, 1267, 1354, 1474, 1624, 1636
BstFNI	CGCG	1 cut(s)	599
BstH2I	RGCGCY	1 cut(s)	160
BstHHI	GCGC	4 cut(s)	102, 159, 601, 1093
BstKTI	GATC	2 cut(s)	460, 1444
BstMAI	GTCTC	3 cut(s)	283, 1741, 1769
BstMBI	GATC	2 cut(s)	457, 1441
BstMCI	CGRYCG	1 cut(s)	142
BstNI	CCWGG	1 cut(s)	488
BstSCI	CCNGG	5 cut(s)	267, 486, 723, 1152, 1257
BstSFI	CTRYAG	1 cut(s)	1785
BstUI	CGCG	1 cut(s)	599
BstV1I	GCAGC	6 cut(s)	595, 1717, 1721, 1801, 1822, 1831
BstV2I	GAAGAC	1 cut(s)	132
BstZ17I	GTATAC	1 cut(s)	1269
BsuI	GTATCC	3 cut(s)	1150, 1282, 1537
BsuRI	GGCC	6 cut(s)	491, 674, 1312, 1363, 1679, 1793
BtgI	CCRYGG	1 cut(s)	675
BtsCI	GGATG	9 cut(s)	781, 838, 1017, 1209, 1267, 1354, 1474, 1624, 1636
BtsIMutI	CAGTG	1 cut(s)	1794
BveI	ACCTGC	1 cut(s)	1915
Cac8I	GCNNGC	4 cut(s)	155, 493, 662, 1869
CaiI	CAGNNNCTG	2 cut(s)	1826, 1847
CciI	TCATGA	1 cut(s)	870
CfoI	GCGC	4 cut(s)	102, 159, 601, 1093
Cfr10I	RCCGGY	1 cut(s)	491
Cfr13I	GGNCC	3 cut(s)	672, 721, 1791
CseI	GACGC	3 cut(s)	137, 484, 605
Csp6I	GTAC	2 cut(s)	451, 625
CviAII	CATG	2 cut(s)	676, 871
CviQI	GTAC	2 cut(s)	451, 625
DdeI	CTNAG	6 cut(s)	1208, 1218, 1326, 1610, 1674, 1819
DpnI	GATC	2 cut(s)	459, 1443
DpnII	GATC	2 cut(s)	457, 1441
EciI	GGCGGA	4 cut(s)	56, 323, 428, 1091
Eco130I	CCWWGG	2 cut(s)	675, 1680
Eco147I	AGGCCT	1 cut(s)	1312
Eco47I	GGWCC	1 cut(s)	721
Eco57I	CTGAAG	3 cut(s)	704, 1481, 1688
EcoRI	GAATTC	1 cut(s)	763
EcoRII	CCWGG	1 cut(s)	486
EcoT14I	CCWWGG	2 cut(s)	675, 1680
ErhI	CCWWGG	2 cut(s)	675, 1680
Esp3I	CGTCTC	1 cut(s)	283
FaeI	CATG	2 cut(s)	679, 874
FatI	CATG	2 cut(s)	675, 870
FauI	CCCGC	1 cut(s)	377
FblI	GTMKAC	2 cut(s)	1268, 1784
FokI	GGATG	9 cut(s)	788, 845, 1024, 1216, 1274, 1361, 1481, 1631, 1643
FspBI	CTAG	2 cut(s)	44, 1755
FspI	TGCGCA	1 cut(s)	1092
GlaI	GCGC	4 cut(s)	101, 158, 600, 1092
GsaI	CCCAGC	1 cut(s)	436
GsuI	CTGGAG	2 cut(s)	686, 1824
HaeII	RGCGCY	1 cut(s)	160
HaeIII	GGCC	6 cut(s)	491, 674, 1312, 1363, 1679, 1793
HapII	CCGG	9 cut(s)	269, 291, 492, 550, 628, 719, 725, 1154, 1259
HgaI	GACGC	3 cut(s)	137, 484, 605
HhaI	GCGC	4 cut(s)	102, 159, 601, 1093
Hin1I	GRCGYC	2 cut(s)	129, 495
Hin1II	CATG	2 cut(s)	679, 874
Hin6I	GCGC	4 cut(s)	100, 157, 599, 1091
HinP1I	GCGC	4 cut(s)	100, 157, 599, 1091
HincII	GTYRAC	1 cut(s)	415
HindII	GTYRAC	1 cut(s)	415
HinfI	GANTC	4 cut(s)	631, 770, 1180, 1898
HpaII	CCGG	9 cut(s)	269, 291, 492, 550, 628, 719, 725, 1154, 1259
HphI	GGTGA	8 cut(s)	19, 316, 475, 505, 934, 1060, 1820, 1892
Hpy166II	GTNNAC	6 cut(s)	415, 652, 1044, 1255, 1269, 1785
Hpy188I	TCNGA	6 cut(s)	457, 618, 744, 769, 775, 1891
Hpy188III	TCNNGA	4 cut(s)	532, 542, 871, 1126
Hpy8I	GTNNAC	6 cut(s)	415, 652, 1044, 1255, 1269, 1785
Hpy99I	CGWCG	4 cut(s)	500, 599, 622, 625
HpyCH4III	ACNGT	2 cut(s)	412, 1048
HpyCH4IV	ACGT	2 cut(s)	623, 1160
HpyCH4V	TGCA	3 cut(s)	1511, 1588, 1916
HpyF3I	CTNAG	6 cut(s)	1208, 1218, 1326, 1610, 1674, 1819
HpySE526I	ACGT	2 cut(s)	623, 1160
Hsp92I	GRCGYC	2 cut(s)	129, 495
Hsp92II	CATG	2 cut(s)	679, 874
HspAI	GCGC	4 cut(s)	100, 157, 599, 1091
KroI	GCCGGC	1 cut(s)	491
KroNI	GCCGGC	1 cut(s)	493
Kzo9I	GATC	2 cut(s)	457, 1441
Lsp1109I	GCAGC	6 cut(s)	595, 1717, 1721, 1801, 1822, 1831
LweI	GCATC	4 cut(s)	177, 1194, 1309, 1498
MaeI	CTAG	2 cut(s)	44, 1755
MaeII	ACGT	2 cut(s)	623, 1160
MaeIII	GTNAC	3 cut(s)	511, 1148, 1743
MalI	GATC	2 cut(s)	459, 1443
MbiI	CCGCTC	2 cut(s)	198, 284
MboI	GATC	2 cut(s)	457, 1441
MboII	GAAGA	9 cut(s)	137, 362, 520, 937, 1141, 1465, 1474, 1780, 1907
MluCI	AATT	8 cut(s)	763, 997, 1051, 1174, 1366, 1517, 1571, 1634
MmeI	TCCRAC	3 cut(s)	411, 641, 1533
MroNI	GCCGGC	1 cut(s)	491
MroXI	GAANNNNTTC	1 cut(s)	710
MseI	TTAA	7 cut(s)	606, 1065, 1104, 1170, 1404, 1502, 1533
MspA1I	CMGCKG	1 cut(s)	1844
MspI	CCGG	9 cut(s)	269, 291, 492, 550, 628, 719, 725, 1154, 1259
MspR9I	CCNGG	5 cut(s)	269, 488, 725, 1154, 1259
Mva1269I	GAATGC	2 cut(s)	937, 1024
MvaI	CCWGG	1 cut(s)	488
MvnI	CGCG	1 cut(s)	599
NaeI	GCCGGC	1 cut(s)	493
NciI	CCSGG	4 cut(s)	269, 725, 1154, 1259
NcoI	CCATGG	1 cut(s)	675
NdeII	GATC	2 cut(s)	457, 1441
NgoMIV	GCCGGC	1 cut(s)	491
NlaIII	CATG	2 cut(s)	679, 874
NlaIV	GGNNCC	3 cut(s)	273, 723, 1792
NmeAIII	GCCGAG	1 cut(s)	1838
NmuCI	GTSAC	2 cut(s)	511, 1148
NsbI	TGCGCA	1 cut(s)	1092
NspV	TTCGAA	1 cut(s)	917
PagI	TCATGA	1 cut(s)	870
PceI	AGGCCT	1 cut(s)	1312
PcsI	WCGNNNNNNNCGW	3 cut(s)	120, 135, 1748
PctI	GAATGC	2 cut(s)	937, 1024
PdiI	GCCGGC	1 cut(s)	493
PdmI	GAANNNNTTC	1 cut(s)	710
PfeI	GAWTC	4 cut(s)	631, 770, 1180, 1898
PflFI	GACNNNGTC	1 cut(s)	1780
PfoI	TCCNGGA	1 cut(s)	267
PsiI	TTATAA	2 cut(s)	1380, 1490
Psp6I	CCWGG	1 cut(s)	486
PspFI	CCCAGC	1 cut(s)	432
PspGI	CCWGG	1 cut(s)	486
PspN4I	GGNNCC	3 cut(s)	273, 723, 1792
PspPI	GGNCC	3 cut(s)	672, 721, 1791
PstNI	CAGNNNCTG	2 cut(s)	1826, 1847
PsyI	GACNNNGTC	1 cut(s)	1780
PvuII	CAGCTG	1 cut(s)	1844
RsaI	GTAC	2 cut(s)	452, 626
RsaNI	GTAC	2 cut(s)	451, 625
SaqAI	TTAA	7 cut(s)	606, 1065, 1104, 1170, 1404, 1502, 1533
Sau3AI	GATC	2 cut(s)	457, 1441
Sau96I	GGNCC	3 cut(s)	672, 721, 1791
ScaI	AGTACT	1 cut(s)	452
ScrFI	CCNGG	5 cut(s)	269, 488, 725, 1154, 1259
SfaNI	GCATC	4 cut(s)	177, 1194, 1309, 1498
SfcI	CTRYAG	1 cut(s)	1785
SfuI	TTCGAA	1 cut(s)	917
SinI	GGWCC	1 cut(s)	721
Sse9I	AATT	8 cut(s)	763, 997, 1051, 1174, 1366, 1517, 1571, 1634
SseBI	AGGCCT	1 cut(s)	1312
SspMI	CTAG	2 cut(s)	44, 1755
StuI	AGGCCT	1 cut(s)	1312
StyD4I	CCNGG	5 cut(s)	267, 486, 723, 1152, 1257
StyI	CCWWGG	2 cut(s)	675, 1680
TaaI	ACNGT	2 cut(s)	412, 1048
TaiI	ACGT	2 cut(s)	626, 1163
TaqI	TCGA	6 cut(s)	171, 348, 543, 714, 917, 1521
TasI	AATT	8 cut(s)	763, 997, 1051, 1174, 1366, 1517, 1571, 1634
TatI	WGTACW	1 cut(s)	450
TfiI	GAWTC	4 cut(s)	631, 770, 1180, 1898
Tru1I	TTAA	7 cut(s)	606, 1065, 1104, 1170, 1404, 1502, 1533
Tru9I	TTAA	7 cut(s)	606, 1065, 1104, 1170, 1404, 1502, 1533
TscAI	CASTG	1 cut(s)	1801
TseFI	GTSAC	2 cut(s)	511, 1148
TseI	GCWGC	6 cut(s)	583, 1709, 1730, 1814, 1835, 1844
Tsp45I	GTSAC	2 cut(s)	511, 1148
TspGWI	ACGGA	2 cut(s)	409, 1740
TspRI	CASTG	1 cut(s)	1801
Tth111I	GACNNNGTC	1 cut(s)	1780
VpaK11BI	GGWCC	1 cut(s)	721
XapI	RAATTY	5 cut(s)	763, 997, 1051, 1366, 1517
XmiI	GTMKAC	2 cut(s)	1268, 1784
XmnI	GAANNNNTTC	1 cut(s)	710
XspI	CTAG	2 cut(s)	44, 1755
ZrmI	AGTACT	1 cut(s)	452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.