Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0007142

Physical Location & Seq

Genomic Coordinates Reverse (-)

66745291 .. 66747472

Gene Structure 2182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG447400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGGCTCTCTCCAAACCCACCTTCCTCACCCACCTCAAAACCCTAGCCAAACCTCCCCACCACCGCCTCCGCCGCCCCACACCCCCCTCATTCCTCTCCCTCCGCTTCCTCTCCTTCGCCACCCCCGAAGACGCCGCCGCCGACCGCCGCCGCCGCAAGCGCCGTCTACGCATCGAGCCCCCAATCTCCCCCCTCCACCGCTCCCAACAACAACAACAACCCCCAAAACCCCAAAACCCTAACCCTAACGCCCCCAAGCTCCCCGAACCCGTCTCCGCTCTCTCCGGCAACCGCCTCAACCTCCACAACAAAATCCTCACCCTCATCCGCCGCAACGACCTCGAAGAAGCCGCCCTCTACACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCATCTACACCGTCAACTCCGTCCTCGCCGCCCAGCTCCGCCAGTCCAAGTACTCCGACCTCCTCTCCCTCCACCGCTTCATCACCCAGGCCGGCGTCGCCCCCAACATCCTCACCCACAACCTCATCTTCCAGACCTATCTCGACTGCCGCAAACCCGACACTGCTATGGAGCATTACAAGCAGCTCATCAACGACGCGCCGTTTAATCCTTCCCCGACGACGTACCGGATTCTGATCAAAGGGCTGGTGGACAATGGCAGGCTGGAGAGGGCGGTGGAGCTGAAGGAGGAGATGGTTGATGTGAAGGGTTTCGAGCCGGACCCGGTTGTGTATCACTATCTGATGGTGGGGTGTGTGAGGAATTCGGATTCGGATGGGGTGTTTCGGCTTTACGAGGAGTTGAAGGAGAAGCTGGGAGGGGAGGTGGAGGATGGAGTTGTGATTGGGAGTCTGATGAAGGGGTATTTCATGAAGGAAATGGAGAAGGAGGCAATGGAGTGTTATGAACAGGCTTCAAAGGTGAGGATGAATGCGGTGGCGTATAACTCGGTGTTGGAGGCTTTGTGTGAGTATGGGAAGTTTGATGAGGCGTTGAAGTTGTTTGATAGGATGAGGGAGGAGCATTCCCCGCCGAGGAGGTTTACGGTGAATTTGGGGAGCTTCAATGTGATGGCGGACGGGTATTGTGCGCAGGGGAGGTTTAAGGAGGCGGTTGAGGTTTTCAGGAAGATGGGGGAGTATAGATGTGACCCGGATACGTTGTCGTTTAATAATTTGATCCAGCATTTGTGTAGCAATGGGTTGCTGAGTGAGGCTGAGGAGGTTTATGGGGAAATGGGGGAGAAGGGAGTGAACCCGGATGAGTATACTTACTCTTTGTTGATGGATACTTGTTTTGAGGAGAATAGGCCTGATGATGCGGCTGAGTATTTTAGGAAAATGGTGGATGAGAAGTTGAGGCCGAATTTGGCTGTTTATAGTAGGTTGGCTGATGGGTTGGTTAAGGTGGGGAAGGTTGATGAGGCGAAATCGTTTTTTGATCTTATGGGGAAGAAGCTGAAGATGGATGTTGCGAGCTATCAGTTTATAATGAAGGCATTGAGTGATGCAGGGAAATTTGATGAGGTGCTTAATGTGGTGGATACATTGTTGGAGGACGAATGGATTGAATTGAATGAGGAGTTGCAGGAGTTCATCAAAGGGGAGCTGAGAAAGGATGGGAGAGAGGATGAATTGGGAAAGCTGATAGAGGAGAAGGAAAGGCTGAAGGCTGAGGCTAAGGCGAAGGAGATTGAGGAAGCAGAAGCAGCAAAGAGAAGTAGAAGTGCTGCTGTCTCCTCGTTACTTCCGTCTAGTTTGTTTGGGAAGAAAGAGACAGGGTCTACAGAGGCCACTGAAAAAGTAGGTGAAGCTGCCTCAGCTTCTGTGGAGGCTGCTCCAGCTGCTGACACAAACTCGGCAGAGCAAGCAGTCAAAGGTGAAAGTTCAGATGAAGAATCCAAAAGCGAGGGTGCAAACGAGCAGGTAGTGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0016070 GO:0016787 GO:0016788 GO:0017076 GO:0019222 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0035639 GO:0036094 GO:0040029 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

643

Amino Acids

72.59

Weight (kDa)

5.54

Isoelectric Point (pI)

43.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	203 - 251	8.8e-07	PPR repeat family
PPR_1	PF12854	308 - 337	1.1e-06	PPR repeat
PPR_2	PF13041	309 - 348	6.3e-08	PPR repeat family
PPR	PF01535	311 - 339	3.9e-07	PPR repeat
PPR_2	PF13041	351 - 389	3.1e-07	PPR repeat family
PPR	PF01535	352 - 381	2.1e-06	PPR repeat
PPR_1	PF12854	381 - 411	1.8e-06	PPR repeat
PPR_2	PF13041	383 - 430	1e-14	PPR repeat family
PPR	PF01535	387 - 416	3.9e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49240
fragaria_vesca	FvH4_2g09580
malus_domestica	MD07G1288700.v1.1
prunus_persica	Prupe.2G310200_v2.0.a1
pyrus_communis	pycom01g22880
rosa_chinensis	RchiOBHm_Chr1g0380631
rosa_laevigata	RLG00000026280
rosa_multiflora	Rmu_sc0004647.1_g000010 Rmu_sc0020141.1_g000001 Rmu_sc0020141.1_g000002 Rmu_sc0021483.1_g000003 Rmu_ssc0000015.1_g000013
rosa_roxburghii	Rroxscaffold_4G00279120
rosa_rugosa	Rorug01G0122900 Rorug01G0423100
rosa_samantha	Rh1AG447400 Rh1BG113000 Rh1BG151000 Rh1BG402900 Rh1CG417300 Rh1DG182800 Rh1DG433200 Rh7CG247500
rosa_wichuraiana	Rw1G038940 Rw7G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1484
Acc16I	TGCGCA	1 cut(s)	1086
Acc36I	ACCTGC	1 cut(s)	1909
AccBSI	CCGCTC	2 cut(s)	201, 278
AccI	GTMKAC	3 cut(s)	166, 1262, 1778
AccII	CGCG	1 cut(s)	593
AclWI	GGATC	1 cut(s)	1168
AcsI	RAATTY	4 cut(s)	757, 1045, 1360, 1511
AcuI	CTGAAG	3 cut(s)	698, 1475, 1682
AcyI	GRCGYC	2 cut(s)	132, 489
AfaI	GTAC	2 cut(s)	446, 620
AfiI	CCNNNNNNNGG	1 cut(s)	1029
AgsI	TTSAA	6 cut(s)	799, 912, 991, 1060, 1565, 1570
AjnI	CCWGG	1 cut(s)	480
AjuI	GAANNNNNNNTTGG	1 cut(s)	37
Alw26I	GTCTC	3 cut(s)	277, 1735, 1763
AlwI	GGATC	1 cut(s)	1168
AlwNI	CAGNNNCTG	2 cut(s)	1820, 1841
AoxI	GGCC	4 cut(s)	483, 1304, 1355, 1785
ApeKI	GCWGC	6 cut(s)	577, 1703, 1724, 1808, 1829, 1838
ApoI	RAATTY	4 cut(s)	757, 1045, 1360, 1511
Asp700I	GAANNNNTTC	1 cut(s)	704
AspLEI	GCGC	3 cut(s)	162, 595, 1087
AspS9I	GGNCC	1 cut(s)	715
AsuC2I	CCSGG	3 cut(s)	719, 1148, 1253
AsuHPI	GGTGA	8 cut(s)	19, 310, 469, 499, 928, 1054, 1814, 1886
AvaII	GGWCC	1 cut(s)	715
BanII	GRGCYC	1 cut(s)	180
BbsI	GAAGAC	1 cut(s)	135
BbvCI	CCTCAGC	3 cut(s)	1212, 1668, 1813
BbvI	GCAGC	6 cut(s)	589, 1711, 1715, 1795, 1816, 1825
BceAI	ACGGC	2 cut(s)	147, 580
BcgI	CGANNNNNNTGC	2 cut(s)	322, 356
BciT130I	CCWGG	1 cut(s)	482
BciVI	GTATCC	3 cut(s)	1144, 1276, 1531
BclI	TGATCA	1 cut(s)	630
BcnI	CCSGG	3 cut(s)	719, 1148, 1253
BcoDI	GTCTC	3 cut(s)	277, 1735, 1763
BfaI	CTAG	2 cut(s)	44, 1749
BfmI	CTRYAG	1 cut(s)	1779
BfoI	RGCGCY	1 cut(s)	163
BfuAI	ACCTGC	1 cut(s)	1909
BfuI	GTATCC	3 cut(s)	1144, 1276, 1531
BmcAI	AGTACT	1 cut(s)	446
Bme1390I	CCNGG	4 cut(s)	482, 719, 1148, 1253
Bme18I	GGWCC	1 cut(s)	715
BmgT120I	GGNCC	1 cut(s)	715
BmiI	GGNNCC	1 cut(s)	717
BmrFI	CCNGG	4 cut(s)	482, 719, 1148, 1253
BmsI	GCATC	3 cut(s)	180, 1303, 1492
BpiI	GAAGAC	1 cut(s)	135
BpmI	CTGGAG	2 cut(s)	680, 1818
Bpu10I	CCTNAGC	4 cut(s)	1212, 1668, 1674, 1813
BpuMI	CCSGG	3 cut(s)	719, 1148, 1253
BsaBI	GATNNNNATC	1 cut(s)	629
BsaHI	GRCGYC	2 cut(s)	132, 489
BsaJI	CCNNGG	2 cut(s)	480, 1028
BsaWI	WCCGGW	1 cut(s)	621
BsaXI	ACNNNNNCTCC	6 cut(s)	443, 473, 804, 834, 944, 974
Bsc4I	CCNNNNNNNGG	1 cut(s)	1029
Bse118I	RCCGGY	1 cut(s)	485
Bse1I	ACTGG	1 cut(s)	436
Bse3DI	GCAATG	2 cut(s)	894, 1198
Bse8I	GATNNNNATC	1 cut(s)	629
BseBI	CCWGG	1 cut(s)	482
BseDI	CCNNGG	2 cut(s)	480, 1028
BseJI	GATNNNNATC	1 cut(s)	629
BseLI	CCNNNNNNNGG	1 cut(s)	1029
BseMI	GCAATG	2 cut(s)	894, 1198
BseMII	CTCAG	6 cut(s)	1193, 1203, 1311, 1595, 1659, 1827
BseNI	ACTGG	1 cut(s)	436
BseXI	GCAGC	6 cut(s)	589, 1711, 1715, 1795, 1816, 1825
BseYI	CCCAGC	2 cut(s)	426, 808
Bsh1236I	CGCG	1 cut(s)	593
Bsh1285I	CGRYCG	1 cut(s)	145
BshFI	GGCC	4 cut(s)	485, 1306, 1357, 1787
BsiEI	CGRYCG	1 cut(s)	145
BsiSI	CCGG	7 cut(s)	285, 486, 622, 713, 719, 1148, 1253
BslI	CCNNNNNNNGG	1 cut(s)	1029
BsmAI	GTCTC	3 cut(s)	277, 1735, 1763
BsmBI	CGTCTC	1 cut(s)	277
BsmI	GAATGC	2 cut(s)	931, 1018
BsnI	GGCC	4 cut(s)	485, 1306, 1357, 1787
Bsp1286I	GDGCHC	1 cut(s)	180
Bsp143I	GATC	3 cut(s)	630, 1173, 1435
BspANI	GGCC	4 cut(s)	485, 1306, 1357, 1787
BspCNI	CTCAG	6 cut(s)	1194, 1204, 1312, 1596, 1660, 1826
BspFNI	CGCG	1 cut(s)	593
BspHI	TCATGA	1 cut(s)	864
BspLI	GGNNCC	1 cut(s)	717
BspMI	ACCTGC	1 cut(s)	1909
BspPI	GGATC	1 cut(s)	1168
BsrBI	CCGCTC	2 cut(s)	201, 278
BsrDI	GCAATG	2 cut(s)	894, 1198
BsrFI	RCCGGY	1 cut(s)	485
BsrI	ACTGG	1 cut(s)	436
BssAI	RCCGGY	1 cut(s)	485
BssECI	CCNNGG	2 cut(s)	480, 1028
BssMI	GATC	3 cut(s)	630, 1173, 1435
BssNAI	GTATAC	1 cut(s)	1263
BssNI	GRCGYC	2 cut(s)	132, 489
Bst1107I	GTATAC	1 cut(s)	1263
Bst2UI	CCWGG	1 cut(s)	482
Bst4CI	ACNGT	2 cut(s)	406, 1042
BstACI	GRCGYC	2 cut(s)	132, 489
BstC8I	GCNNGC	5 cut(s)	158, 487, 656, 1471, 1863
BstDEI	CTNAG	7 cut(s)	1202, 1212, 1320, 1604, 1668, 1674, 1813
BstFNI	CGCG	1 cut(s)	593
BstH2I	RGCGCY	1 cut(s)	163
BstHHI	GCGC	3 cut(s)	162, 595, 1087
BstKTI	GATC	3 cut(s)	633, 1176, 1438
BstMAI	GTCTC	3 cut(s)	277, 1735, 1763
BstMBI	GATC	3 cut(s)	630, 1173, 1435
BstMCI	CGRYCG	1 cut(s)	145
BstNI	CCWGG	1 cut(s)	482
BstSCI	CCNGG	4 cut(s)	480, 717, 1146, 1251
BstSFI	CTRYAG	1 cut(s)	1779
BstUI	CGCG	1 cut(s)	593
BstV1I	GCAGC	6 cut(s)	589, 1711, 1715, 1795, 1816, 1825
BstV2I	GAAGAC	1 cut(s)	135
BstZ17I	GTATAC	1 cut(s)	1263
BsuI	GTATCC	3 cut(s)	1144, 1276, 1531
BsuRI	GGCC	4 cut(s)	485, 1306, 1357, 1787
BtsI	GCAGTG	1 cut(s)	555
BtsIMutI	CAGTG	2 cut(s)	555, 1788
BveI	ACCTGC	1 cut(s)	1909
Cac8I	GCNNGC	5 cut(s)	158, 487, 656, 1471, 1863
CaiI	CAGNNNCTG	2 cut(s)	1820, 1841
CciI	TCATGA	1 cut(s)	864
CfoI	GCGC	3 cut(s)	162, 595, 1087
Cfr10I	RCCGGY	1 cut(s)	485
Cfr13I	GGNCC	1 cut(s)	715
CseI	GACGC	3 cut(s)	140, 478, 599
Csp6I	GTAC	2 cut(s)	445, 619
CviAII	CATG	1 cut(s)	865
CviQI	GTAC	2 cut(s)	445, 619
DdeI	CTNAG	7 cut(s)	1202, 1212, 1320, 1604, 1668, 1674, 1813
DpnI	GATC	3 cut(s)	632, 1175, 1437
DpnII	GATC	3 cut(s)	630, 1173, 1435
EciI	GGCGGA	4 cut(s)	59, 317, 422, 1085
Eco147I	AGGCCT	1 cut(s)	1306
Eco24I	GRGCYC	1 cut(s)	180
Eco47I	GGWCC	1 cut(s)	715
Eco57I	CTGAAG	3 cut(s)	698, 1475, 1682
EcoRI	GAATTC	1 cut(s)	757
EcoRII	CCWGG	1 cut(s)	480
EcoT38I	GRGCYC	1 cut(s)	180
Esp3I	CGTCTC	1 cut(s)	277
FaeI	CATG	1 cut(s)	868
FatI	CATG	1 cut(s)	864
FauI	CCCGC	2 cut(s)	371, 1032
FbaI	TGATCA	1 cut(s)	630
FblI	GTMKAC	3 cut(s)	166, 1262, 1778
FriOI	GRGCYC	1 cut(s)	180
FspBI	CTAG	2 cut(s)	44, 1749
FspI	TGCGCA	1 cut(s)	1086
GlaI	GCGC	3 cut(s)	161, 594, 1086
GsaI	CCCAGC	2 cut(s)	430, 812
GsuI	CTGGAG	2 cut(s)	680, 1818
HaeII	RGCGCY	1 cut(s)	163
HaeIII	GGCC	4 cut(s)	485, 1306, 1357, 1787
HapII	CCGG	7 cut(s)	285, 486, 622, 713, 719, 1148, 1253
HgaI	GACGC	3 cut(s)	140, 478, 599
HhaI	GCGC	3 cut(s)	162, 595, 1087
Hin1I	GRCGYC	2 cut(s)	132, 489
Hin1II	CATG	1 cut(s)	868
Hin6I	GCGC	3 cut(s)	160, 593, 1085
HinP1I	GCGC	3 cut(s)	160, 593, 1085
HincII	GTYRAC	1 cut(s)	409
HindII	GTYRAC	1 cut(s)	409
HinfI	GANTC	4 cut(s)	625, 764, 844, 1892
HpaII	CCGG	7 cut(s)	285, 486, 622, 713, 719, 1148, 1253
HphI	GGTGA	8 cut(s)	19, 310, 469, 499, 928, 1054, 1814, 1886
Hpy166II	GTNNAC	7 cut(s)	167, 409, 646, 1038, 1249, 1263, 1779
Hpy188I	TCNGA	7 cut(s)	451, 630, 738, 763, 769, 849, 1885
Hpy188III	TCNNGA	4 cut(s)	526, 536, 865, 1120
Hpy8I	GTNNAC	7 cut(s)	167, 409, 646, 1038, 1249, 1263, 1779
Hpy99I	CGWCG	4 cut(s)	494, 593, 616, 619
HpyCH4III	ACNGT	2 cut(s)	406, 1042
HpyCH4IV	ACGT	2 cut(s)	617, 1154
HpyCH4V	TGCA	3 cut(s)	1505, 1582, 1910
HpyF3I	CTNAG	7 cut(s)	1202, 1212, 1320, 1604, 1668, 1674, 1813
HpySE526I	ACGT	2 cut(s)	617, 1154
Hsp92I	GRCGYC	2 cut(s)	132, 489
Hsp92II	CATG	1 cut(s)	868
HspAI	GCGC	3 cut(s)	160, 593, 1085
KroI	GCCGGC	1 cut(s)	485
KroNI	GCCGGC	1 cut(s)	487
Ksp22I	TGATCA	1 cut(s)	630
Kzo9I	GATC	3 cut(s)	630, 1173, 1435
LmnI	GCTCC	9 cut(s)	206, 264, 435, 565, 673, 1015, 1053, 1600, 1837
Lsp1109I	GCAGC	6 cut(s)	589, 1711, 1715, 1795, 1816, 1825
LweI	GCATC	3 cut(s)	180, 1303, 1492
MaeI	CTAG	2 cut(s)	44, 1749
MaeII	ACGT	2 cut(s)	617, 1154
MaeIII	GTNAC	2 cut(s)	1142, 1737
MalI	GATC	3 cut(s)	632, 1175, 1437
MbiI	CCGCTC	2 cut(s)	201, 278
MboI	GATC	3 cut(s)	630, 1173, 1435
MboII	GAAGA	8 cut(s)	140, 356, 514, 1135, 1459, 1468, 1774, 1901
MhlI	GDGCHC	1 cut(s)	180
MluCI	AATT	7 cut(s)	757, 1045, 1168, 1360, 1511, 1565, 1628
MlyI	GAGTC	1 cut(s)	853
MmeI	TCCRAC	4 cut(s)	405, 474, 930, 1527
MroNI	GCCGGC	1 cut(s)	485
MroXI	GAANNNNTTC	1 cut(s)	704
MseI	TTAA	5 cut(s)	600, 1098, 1164, 1398, 1527
MslI	CAYNNNNRTG	1 cut(s)	560
MspA1I	CMGCKG	1 cut(s)	1838
MspI	CCGG	7 cut(s)	285, 486, 622, 713, 719, 1148, 1253
MspR9I	CCNGG	4 cut(s)	482, 719, 1148, 1253
Mva1269I	GAATGC	2 cut(s)	931, 1018
MvaI	CCWGG	1 cut(s)	482
MvnI	CGCG	1 cut(s)	593
NaeI	GCCGGC	1 cut(s)	487
NciI	CCSGG	3 cut(s)	719, 1148, 1253
NdeII	GATC	3 cut(s)	630, 1173, 1435
NgoMIV	GCCGGC	1 cut(s)	485
NlaIII	CATG	1 cut(s)	868
NlaIV	GGNNCC	1 cut(s)	717
NmeAIII	GCCGAG	2 cut(s)	1053, 1832
NmuCI	GTSAC	1 cut(s)	1142
NsbI	TGCGCA	1 cut(s)	1086
PagI	TCATGA	1 cut(s)	864
PceI	AGGCCT	1 cut(s)	1306
PcsI	WCGNNNNNNNCGW	3 cut(s)	123, 138, 1742
PctI	GAATGC	2 cut(s)	931, 1018
PdiI	GCCGGC	1 cut(s)	487
PdmI	GAANNNNTTC	1 cut(s)	704
PfeI	GAWTC	3 cut(s)	625, 764, 1892
PflFI	GACNNNGTC	1 cut(s)	1774
PleI	GAGTC	1 cut(s)	852
PpsI	GAGTC	1 cut(s)	852
PsiI	TTATAA	1 cut(s)	1484
Psp6I	CCWGG	1 cut(s)	480
PspFI	CCCAGC	2 cut(s)	426, 808
PspGI	CCWGG	1 cut(s)	480
PspN4I	GGNNCC	1 cut(s)	717
PspPI	GGNCC	1 cut(s)	715
PstNI	CAGNNNCTG	2 cut(s)	1820, 1841
PsyI	GACNNNGTC	1 cut(s)	1774
PvuII	CAGCTG	1 cut(s)	1838
RsaI	GTAC	2 cut(s)	446, 620
RsaNI	GTAC	2 cut(s)	445, 619
RseI	CAYNNNNRTG	1 cut(s)	560
SaqAI	TTAA	5 cut(s)	600, 1098, 1164, 1398, 1527
Sau3AI	GATC	3 cut(s)	630, 1173, 1435
Sau96I	GGNCC	1 cut(s)	715
ScaI	AGTACT	1 cut(s)	446
SchI	GAGTC	1 cut(s)	853
ScrFI	CCNGG	4 cut(s)	482, 719, 1148, 1253
SduI	GDGCHC	1 cut(s)	180
SfaNI	GCATC	3 cut(s)	180, 1303, 1492
SfcI	CTRYAG	1 cut(s)	1779
SinI	GGWCC	1 cut(s)	715
SmiMI	CAYNNNNRTG	1 cut(s)	560
Sse9I	AATT	7 cut(s)	757, 1045, 1168, 1360, 1511, 1565, 1628
SseBI	AGGCCT	1 cut(s)	1306
SspMI	CTAG	2 cut(s)	44, 1749
StuI	AGGCCT	1 cut(s)	1306
StyD4I	CCNGG	4 cut(s)	480, 717, 1146, 1251
TaaI	ACNGT	2 cut(s)	406, 1042
TaiI	ACGT	2 cut(s)	620, 1157
TaqI	TCGA	4 cut(s)	174, 342, 537, 708
TasI	AATT	7 cut(s)	757, 1045, 1168, 1360, 1511, 1565, 1628
TatI	WGTACW	1 cut(s)	444
TfiI	GAWTC	3 cut(s)	625, 764, 1892
Tru1I	TTAA	5 cut(s)	600, 1098, 1164, 1398, 1527
Tru9I	TTAA	5 cut(s)	600, 1098, 1164, 1398, 1527
TscAI	CASTG	2 cut(s)	562, 1795
TseFI	GTSAC	1 cut(s)	1142
TseI	GCWGC	6 cut(s)	577, 1703, 1724, 1808, 1829, 1838
Tsp45I	GTSAC	1 cut(s)	1142
TspGWI	ACGGA	2 cut(s)	403, 1734
TspRI	CASTG	2 cut(s)	562, 1795
Tth111I	GACNNNGTC	1 cut(s)	1774
VpaK11BI	GGWCC	1 cut(s)	715
XapI	RAATTY	4 cut(s)	757, 1045, 1360, 1511
XmiI	GTMKAC	3 cut(s)	166, 1262, 1778
XmnI	GAANNNNTTC	1 cut(s)	704
XspI	CTAG	2 cut(s)	44, 1749
ZrmI	AGTACT	1 cut(s)	446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.