Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0007142

Physical Location & Seq

Genomic Coordinates Reverse (-)

67808129 .. 67811354

Gene Structure 3226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG417300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGAACTCAATTCCATCCCCTCATTTCTCTTCTCCATTTTCTAAAACCCTCTCAGAACCCCTTCTCTGCAAATCTCCCAAATCCATGGCTCTCTCCAAACCCTCCTTCCTCACCCACCTCAAAACCCTAGCCAAACCCCCCCACCGCCACCGCCACCTCCGCCGCCACACACCCCCCTCATTCCTCTCTCTCCGCTCCCTCTCCTTCGCCACCCCCGAAGACGCCGCCGCCGACCGCCGCCGCCGCAAGCGCCGCCTCCGCATCGAGCCCCCAATCTCCCCCCTCCACCGCTCCCAACAACAACAACCCCCAAAACCCCAAAACCCTAACCCTAACGCCCCCAAGCTCCCCGAACCCGTCTCCGCTCTCTCCGGCAACCGCCTCAACCTCCACAACAAAATCCTCACCCTCATCCGCCGCAACGACCTCGAAGAAGCCGCCCTCTACACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCATCTACACCGTCAACTCCGTCCTCGCCGCCCAGCTCCGCCAGTCCAAGTACTCCGACCTCCTCTCCCTCCACCGCTTCATCACCCAGGCCGGCGTCGCCCCCAACATCGTCACCCACAACCTCATCTTCCAGACCTATCTCGACTGCCGGAAACCCGATACTGCTATGGAGCATTACAAGCAGCTCGTCAACGACGCGCCGTTTAATCCTTCTCCGACGACCTACCGGATTCTGATCAAAGGGTTGGTGGACAATGGCAAGCTGGAGAGGGCCGTGGAGCTGAAGGAGGAGATGGTTGATGTCAAGGGTTTCGAGCCAGACCCGGTTGTGTATCACTATCTGATGGTGGGGTGTGTGAGGAATTCGGATTCGGATGGGGTGTTTCGGCTTTACGAGGAGTTGAAGGAGAAGCTGGGAGGGGAGGTGGAGGATGGGGTTGTGATTGGGAGTTTGATGAAGGGGTATTTCATCAAGGAAATGGAGAAGGAGGCAATGGAGTGTTATGAACAGGCTTCGAAGGTGAAGATGAATGCGGTGGCGTATAACTCGGTGTTGGAGGCTTTGTGTGAGTATGGGAAGTTTGATGAGGCGTTGAAGTTGTTTGATAGGATGAGGGAGGAGCATTCCCCGCCGAGGAGGTTTACGGTGAATTTGGGGAGCTTTAATGTGATGGCGGACGGGTATTGTGCGCAGGGGAGGTTTAAGGAGGCGGTTGAGGTTTTTAGGAAGATGGGGGAGTATAGATGTGACCCGGATACGTTGTCGTTTAATAATTTGATTCAGCATTTGTGTAGCAATGGGATGCTGAGTGAGGCTGAGGAGGTTTATGGGGAAATGGGGGAGAAGGGAGTGAACCCGGATGAGTATACTTACTCTTTGTTGATGGATACTTGTTTTGAGGATAATAGGCCTGATGATGCGGCTGAGTATTTTAGGAAAATGGTGGATGAGAAGTTGAGGCCAAATTTGGCTGTTTATAATAGGTTGGCTGATGGGTTGGTTAAGGTGGGGAAGGTTGATGAGGCGAAATCGTTTTTTGATCTTATGGGGAAGAAGCTGAAGATGGATGTTGCGAGCTATCAGTTTATAATGAAGGCATTGAGTGATGCAGGGAAATTTGATGAGGTGCTTAATGTGGTGGATACATTGTTGGAGGACGAATGGATTGAATTGAATGAGGAGTTGCAGGAGTTCATCAAAGGGGAGCTGAGAAAGGATGGGAGAGAGGATGAATTGGGAAAGCTGATAGAGGAGAAGGAAAGGCTGAAGGCTGAGGCTAAGGCGAAGGAGATTGAGGAAGCAGAAGCAGCAAAGAGAAGTAGAAGTGCTGCTGTCTCCTCGTTACTTCCGTCTAGTTTGTTTGGGAAGAAAGAGACGGGGTCTACAGAGGCCACTGAAAAAGTAGGTGAAGCTGCCTCAGCTTCTGTGGAGGCTGCTCCAGCTGCTGACACGAACTCAGCAGAGCAAGCAGTCAAAGGTGAAAGTTCAGATGAAGAATCCAAAAGCGAGGGTGCAAACGAGCAGGTAGTGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0016070 GO:0016787 GO:0016788 GO:0017076 GO:0019222 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0035639 GO:0036094 GO:0040029 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

672

Amino Acids

75.68

Weight (kDa)

5.83

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	232 - 280	7e-07	PPR repeat family
PPR_1	PF12854	335 - 366	4.3e-07	PPR repeat
PPR_2	PF13041	338 - 377	6.6e-08	PPR repeat family
PPR	PF01535	340 - 368	4.1e-07	PPR repeat
PPR_2	PF13041	380 - 418	3.3e-07	PPR repeat family
PPR	PF01535	381 - 410	2.2e-06	PPR repeat
PPR_1	PF12854	410 - 440	1.8e-06	PPR repeat
PPR_2	PF13041	412 - 459	4.2e-15	PPR repeat family
PPR	PF01535	416 - 445	2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49240
fragaria_vesca	FvH4_2g09580
malus_domestica	MD07G1288700.v1.1
prunus_persica	Prupe.2G310200_v2.0.a1
pyrus_communis	pycom01g22880
rosa_chinensis	RchiOBHm_Chr1g0380631
rosa_laevigata	RLG00000026280
rosa_multiflora	Rmu_sc0004647.1_g000010 Rmu_sc0020141.1_g000001 Rmu_sc0020141.1_g000002 Rmu_sc0021483.1_g000003 Rmu_ssc0000015.1_g000013
rosa_roxburghii	Rroxscaffold_4G00279120
rosa_rugosa	Rorug01G0122900 Rorug01G0423100
rosa_samantha	Rh1AG447400 Rh1BG113000 Rh1BG151000 Rh1BG402900 Rh1CG417300 Rh1DG182800 Rh1DG433200 Rh7CG247500
rosa_wichuraiana	Rw1G038940 Rw7G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1461, 1571
Acc16I	TGCGCA	1 cut(s)	1173
Acc36I	ACCTGC	1 cut(s)	1996
AccBSI	CCGCTC	3 cut(s)	195, 291, 365
AccI	GTMKAC	2 cut(s)	1349, 1865
AccII	CGCG	1 cut(s)	680
AcsI	RAATTY	4 cut(s)	844, 1132, 1447, 1598
AcuI	CTGAAG	3 cut(s)	785, 1562, 1769
AcyI	GRCGYC	2 cut(s)	222, 576
AfaI	GTAC	1 cut(s)	533
AfiI	CCNNNNNNNGG	1 cut(s)	1116
AgsI	TTSAA	4 cut(s)	886, 1078, 1652, 1657
AjnI	CCWGG	1 cut(s)	567
AjuI	GAANNNNNNNTTGG	2 cut(s)	89, 121
Alw26I	GTCTC	3 cut(s)	364, 1822, 1850
AlwNI	CAGNNNCTG	2 cut(s)	1907, 1928
AoxI	GGCC	5 cut(s)	570, 753, 1391, 1442, 1872
ApeKI	GCWGC	6 cut(s)	664, 1790, 1811, 1895, 1916, 1925
ApoI	RAATTY	4 cut(s)	844, 1132, 1447, 1598
Asp700I	GAANNNNTTC	1 cut(s)	60
AspLEI	GCGC	3 cut(s)	252, 682, 1174
AspS9I	GGNCC	1 cut(s)	753
AsuC2I	CCSGG	3 cut(s)	806, 1235, 1340
AsuHPI	GGTGA	8 cut(s)	103, 397, 556, 586, 1015, 1141, 1901, 1973
AsuII	TTCGAA	1 cut(s)	998
BanII	GRGCYC	1 cut(s)	270
BbsI	GAAGAC	1 cut(s)	225
BbvCI	CCTCAGC	3 cut(s)	1299, 1755, 1900
BbvI	GCAGC	6 cut(s)	676, 1798, 1802, 1882, 1903, 1912
BceAI	ACGGC	2 cut(s)	667, 740
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	1 cut(s)	569
BciVI	GTATCC	3 cut(s)	1231, 1363, 1618
BclI	TGATCA	1 cut(s)	717
BcnI	CCSGG	3 cut(s)	806, 1235, 1340
BcoDI	GTCTC	3 cut(s)	364, 1822, 1850
BfaI	CTAG	2 cut(s)	128, 1836
BfmI	CTRYAG	1 cut(s)	1866
BfoI	RGCGCY	1 cut(s)	253
BfuAI	ACCTGC	1 cut(s)	1996
BfuI	GTATCC	3 cut(s)	1231, 1363, 1618
BmcAI	AGTACT	1 cut(s)	533
Bme1390I	CCNGG	4 cut(s)	569, 806, 1235, 1340
BmgT120I	GGNCC	1 cut(s)	753
BmrFI	CCNGG	4 cut(s)	569, 806, 1235, 1340
BmsI	GCATC	4 cut(s)	270, 1275, 1390, 1579
BpiI	GAAGAC	1 cut(s)	225
BpmI	CTGGAG	2 cut(s)	767, 1905
Bpu10I	CCTNAGC	4 cut(s)	1299, 1755, 1761, 1900
Bpu14I	TTCGAA	1 cut(s)	998
BpuMI	CCSGG	3 cut(s)	806, 1235, 1340
BsaBI	GATNNNNATC	1 cut(s)	716
BsaHI	GRCGYC	2 cut(s)	222, 576
BsaJI	CCNNGG	4 cut(s)	84, 567, 756, 1115
BsaWI	WCCGGW	1 cut(s)	708
BsaXI	ACNNNNNCTCC	6 cut(s)	530, 560, 891, 921, 1031, 1061
Bsc4I	CCNNNNNNNGG	1 cut(s)	1116
Bse118I	RCCGGY	1 cut(s)	572
Bse1I	ACTGG	1 cut(s)	523
Bse3DI	GCAATG	2 cut(s)	981, 1285
Bse8I	GATNNNNATC	1 cut(s)	716
BseBI	CCWGG	1 cut(s)	569
BseDI	CCNNGG	4 cut(s)	84, 567, 756, 1115
BseJI	GATNNNNATC	1 cut(s)	716
BseLI	CCNNNNNNNGG	1 cut(s)	1116
BseMI	GCAATG	2 cut(s)	981, 1285
BseMII	CTCAG	8 cut(s)	66, 1280, 1290, 1398, 1682, 1746, 1914, 1953
BseNI	ACTGG	1 cut(s)	523
BseRI	GAGGAG	9 cut(s)	533, 785, 893, 1115, 1132, 1316, 1676, 1748, 1810
BseXI	GCAGC	6 cut(s)	676, 1798, 1802, 1882, 1903, 1912
BseYI	CCCAGC	2 cut(s)	513, 895
Bsh1236I	CGCG	1 cut(s)	680
Bsh1285I	CGRYCG	1 cut(s)	235
BshFI	GGCC	5 cut(s)	572, 755, 1393, 1444, 1874
BsiEI	CGRYCG	1 cut(s)	235
BsiSI	CCGG	7 cut(s)	372, 573, 631, 709, 806, 1235, 1340
BslI	CCNNNNNNNGG	1 cut(s)	1116
BsmAI	GTCTC	3 cut(s)	364, 1822, 1850
BsmBI	CGTCTC	2 cut(s)	364, 1850
BsmI	GAATGC	2 cut(s)	1018, 1105
BsnI	GGCC	5 cut(s)	572, 755, 1393, 1444, 1874
Bsp119I	TTCGAA	1 cut(s)	998
Bsp1286I	GDGCHC	1 cut(s)	270
Bsp143I	GATC	2 cut(s)	717, 1522
Bsp19I	CCATGG	1 cut(s)	84
BspANI	GGCC	5 cut(s)	572, 755, 1393, 1444, 1874
BspCNI	CTCAG	8 cut(s)	65, 1281, 1291, 1399, 1683, 1747, 1913, 1952
BspFNI	CGCG	1 cut(s)	680
BspMI	ACCTGC	1 cut(s)	1996
BspT104I	TTCGAA	1 cut(s)	998
BsrBI	CCGCTC	3 cut(s)	195, 291, 365
BsrDI	GCAATG	2 cut(s)	981, 1285
BsrFI	RCCGGY	1 cut(s)	572
BsrI	ACTGG	1 cut(s)	523
BssAI	RCCGGY	1 cut(s)	572
BssECI	CCNNGG	4 cut(s)	84, 567, 756, 1115
BssMI	GATC	2 cut(s)	717, 1522
BssNAI	GTATAC	1 cut(s)	1350
BssNI	GRCGYC	2 cut(s)	222, 576
BssT1I	CCWWGG	1 cut(s)	84
Bst1107I	GTATAC	1 cut(s)	1350
Bst2UI	CCWGG	1 cut(s)	569
Bst4CI	ACNGT	2 cut(s)	493, 1129
Bst6I	CTCTTC	1 cut(s)	34
BstACI	GRCGYC	2 cut(s)	222, 576
BstBI	TTCGAA	1 cut(s)	998
BstC8I	GCNNGC	5 cut(s)	248, 574, 743, 1558, 1950
BstDEI	CTNAG	9 cut(s)	52, 1289, 1299, 1407, 1691, 1755, 1761, 1900, 1939
BstDSI	CCRYGG	2 cut(s)	84, 756
BstFNI	CGCG	1 cut(s)	680
BstH2I	RGCGCY	1 cut(s)	253
BstHHI	GCGC	3 cut(s)	252, 682, 1174
BstKTI	GATC	2 cut(s)	720, 1525
BstMAI	GTCTC	3 cut(s)	364, 1822, 1850
BstMBI	GATC	2 cut(s)	717, 1522
BstMCI	CGRYCG	1 cut(s)	235
BstNI	CCWGG	1 cut(s)	569
BstSCI	CCNGG	4 cut(s)	567, 804, 1233, 1338
BstSFI	CTRYAG	1 cut(s)	1866
BstUI	CGCG	1 cut(s)	680
BstV1I	GCAGC	6 cut(s)	676, 1798, 1802, 1882, 1903, 1912
BstV2I	GAAGAC	1 cut(s)	225
BstXI	CCANNNNNNTGG	1 cut(s)	85
BstZ17I	GTATAC	1 cut(s)	1350
BsuI	GTATCC	3 cut(s)	1231, 1363, 1618
BsuRI	GGCC	5 cut(s)	572, 755, 1393, 1444, 1874
BtgI	CCRYGG	2 cut(s)	84, 756
BtsIMutI	CAGTG	1 cut(s)	1875
BveI	ACCTGC	1 cut(s)	1996
Cac8I	GCNNGC	5 cut(s)	248, 574, 743, 1558, 1950
CaiI	CAGNNNCTG	2 cut(s)	1907, 1928
CfoI	GCGC	3 cut(s)	252, 682, 1174
Cfr10I	RCCGGY	1 cut(s)	572
Cfr13I	GGNCC	1 cut(s)	753
CseI	GACGC	3 cut(s)	230, 565, 686
Csp6I	GTAC	1 cut(s)	532
CviAII	CATG	1 cut(s)	85
CviQI	GTAC	1 cut(s)	532
DdeI	CTNAG	9 cut(s)	52, 1289, 1299, 1407, 1691, 1755, 1761, 1900, 1939
DpnI	GATC	2 cut(s)	719, 1524
DpnII	GATC	2 cut(s)	717, 1522
Eam1104I	CTCTTC	1 cut(s)	34
EarI	CTCTTC	1 cut(s)	34
EciI	GGCGGA	4 cut(s)	149, 404, 509, 1172
Eco130I	CCWWGG	1 cut(s)	84
Eco147I	AGGCCT	1 cut(s)	1393
Eco24I	GRGCYC	1 cut(s)	270
Eco57I	CTGAAG	3 cut(s)	785, 1562, 1769
EcoRI	GAATTC	1 cut(s)	844
EcoRII	CCWGG	1 cut(s)	567
EcoT14I	CCWWGG	1 cut(s)	84
EcoT38I	GRGCYC	1 cut(s)	270
ErhI	CCWWGG	1 cut(s)	84
Esp3I	CGTCTC	2 cut(s)	364, 1850
FaeI	CATG	1 cut(s)	88
FatI	CATG	1 cut(s)	84
FauI	CCCGC	2 cut(s)	458, 1119
FbaI	TGATCA	1 cut(s)	717
FblI	GTMKAC	2 cut(s)	1349, 1865
FriOI	GRGCYC	1 cut(s)	270
FspBI	CTAG	2 cut(s)	128, 1836
FspI	TGCGCA	1 cut(s)	1173
GlaI	GCGC	3 cut(s)	251, 681, 1173
GsaI	CCCAGC	2 cut(s)	517, 899
GsuI	CTGGAG	2 cut(s)	767, 1905
HaeII	RGCGCY	1 cut(s)	253
HaeIII	GGCC	5 cut(s)	572, 755, 1393, 1444, 1874
HapII	CCGG	7 cut(s)	372, 573, 631, 709, 806, 1235, 1340
HgaI	GACGC	3 cut(s)	230, 565, 686
HhaI	GCGC	3 cut(s)	252, 682, 1174
Hin1I	GRCGYC	2 cut(s)	222, 576
Hin1II	CATG	1 cut(s)	88
Hin6I	GCGC	3 cut(s)	250, 680, 1172
HinP1I	GCGC	3 cut(s)	250, 680, 1172
HincII	GTYRAC	2 cut(s)	496, 673
HindII	GTYRAC	2 cut(s)	496, 673
HinfI	GANTC	4 cut(s)	712, 851, 1261, 1979
HpaII	CCGG	7 cut(s)	372, 573, 631, 709, 806, 1235, 1340
HphI	GGTGA	8 cut(s)	103, 397, 556, 586, 1015, 1141, 1901, 1973
Hpy166II	GTNNAC	7 cut(s)	496, 673, 733, 1125, 1336, 1350, 1866
Hpy188I	TCNGA	8 cut(s)	55, 538, 699, 717, 825, 850, 856, 1972
Hpy188III	TCNNGA	2 cut(s)	613, 623
Hpy8I	GTNNAC	7 cut(s)	496, 673, 733, 1125, 1336, 1350, 1866
Hpy99I	CGWCG	3 cut(s)	581, 680, 703
HpyCH4III	ACNGT	2 cut(s)	493, 1129
HpyCH4IV	ACGT	1 cut(s)	1241
HpyCH4V	TGCA	4 cut(s)	69, 1592, 1669, 1997
HpyF3I	CTNAG	9 cut(s)	52, 1289, 1299, 1407, 1691, 1755, 1761, 1900, 1939
HpySE526I	ACGT	1 cut(s)	1241
Hsp92I	GRCGYC	2 cut(s)	222, 576
Hsp92II	CATG	1 cut(s)	88
HspAI	GCGC	3 cut(s)	250, 680, 1172
KroI	GCCGGC	1 cut(s)	572
KroNI	GCCGGC	1 cut(s)	574
Ksp22I	TGATCA	1 cut(s)	717
Kzo9I	GATC	2 cut(s)	717, 1522
Lsp1109I	GCAGC	6 cut(s)	676, 1798, 1802, 1882, 1903, 1912
LweI	GCATC	4 cut(s)	270, 1275, 1390, 1579
MaeI	CTAG	2 cut(s)	128, 1836
MaeII	ACGT	1 cut(s)	1241
MaeIII	GTNAC	3 cut(s)	592, 1229, 1824
MalI	GATC	2 cut(s)	719, 1524
MbiI	CCGCTC	3 cut(s)	195, 291, 365
MboI	GATC	2 cut(s)	717, 1522
MhlI	GDGCHC	1 cut(s)	270
MluCI	AATT	8 cut(s)	9, 844, 1132, 1255, 1447, 1598, 1652, 1715
MmeI	TCCRAC	5 cut(s)	492, 561, 722, 1017, 1614
MroNI	GCCGGC	1 cut(s)	572
MroXI	GAANNNNTTC	1 cut(s)	60
MseI	TTAA	6 cut(s)	687, 1146, 1185, 1251, 1485, 1614
MspA1I	CMGCKG	1 cut(s)	1925
MspI	CCGG	7 cut(s)	372, 573, 631, 709, 806, 1235, 1340
MspR9I	CCNGG	4 cut(s)	569, 806, 1235, 1340
Mva1269I	GAATGC	2 cut(s)	1018, 1105
MvaI	CCWGG	1 cut(s)	569
MvnI	CGCG	1 cut(s)	680
NaeI	GCCGGC	1 cut(s)	574
NciI	CCSGG	3 cut(s)	806, 1235, 1340
NcoI	CCATGG	1 cut(s)	84
NdeII	GATC	2 cut(s)	717, 1522
NgoMIV	GCCGGC	1 cut(s)	572
NlaIII	CATG	1 cut(s)	88
NmeAIII	GCCGAG	1 cut(s)	1140
NmuCI	GTSAC	2 cut(s)	592, 1229
NsbI	TGCGCA	1 cut(s)	1173
NspV	TTCGAA	1 cut(s)	998
PceI	AGGCCT	1 cut(s)	1393
PcsI	WCGNNNNNNNCGW	3 cut(s)	213, 228, 1829
PctI	GAATGC	2 cut(s)	1018, 1105
PdiI	GCCGGC	1 cut(s)	574
PdmI	GAANNNNTTC	1 cut(s)	60
PfeI	GAWTC	4 cut(s)	712, 851, 1261, 1979
PflFI	GACNNNGTC	1 cut(s)	1861
PsiI	TTATAA	2 cut(s)	1461, 1571
Psp6I	CCWGG	1 cut(s)	567
PspFI	CCCAGC	2 cut(s)	513, 895
PspGI	CCWGG	1 cut(s)	567
PspPI	GGNCC	1 cut(s)	753
PstNI	CAGNNNCTG	2 cut(s)	1907, 1928
PsyI	GACNNNGTC	1 cut(s)	1861
PvuII	CAGCTG	1 cut(s)	1925
RsaI	GTAC	1 cut(s)	533
RsaNI	GTAC	1 cut(s)	532
SaqAI	TTAA	6 cut(s)	687, 1146, 1185, 1251, 1485, 1614
Sau3AI	GATC	2 cut(s)	717, 1522
Sau96I	GGNCC	1 cut(s)	753
ScaI	AGTACT	1 cut(s)	533
ScrFI	CCNGG	4 cut(s)	569, 806, 1235, 1340
SduI	GDGCHC	1 cut(s)	270
SfaNI	GCATC	4 cut(s)	270, 1275, 1390, 1579
SfcI	CTRYAG	1 cut(s)	1866
SfuI	TTCGAA	1 cut(s)	998
Sse9I	AATT	8 cut(s)	9, 844, 1132, 1255, 1447, 1598, 1652, 1715
SseBI	AGGCCT	1 cut(s)	1393
SspMI	CTAG	2 cut(s)	128, 1836
StuI	AGGCCT	1 cut(s)	1393
StyD4I	CCNGG	4 cut(s)	567, 804, 1233, 1338
StyI	CCWWGG	1 cut(s)	84
TaaI	ACNGT	2 cut(s)	493, 1129
TaiI	ACGT	1 cut(s)	1244
TaqI	TCGA	5 cut(s)	264, 429, 624, 795, 998
TasI	AATT	8 cut(s)	9, 844, 1132, 1255, 1447, 1598, 1652, 1715
TatI	WGTACW	1 cut(s)	531
TfiI	GAWTC	4 cut(s)	712, 851, 1261, 1979
Tru1I	TTAA	6 cut(s)	687, 1146, 1185, 1251, 1485, 1614
Tru9I	TTAA	6 cut(s)	687, 1146, 1185, 1251, 1485, 1614
TscAI	CASTG	1 cut(s)	1882
TseFI	GTSAC	2 cut(s)	592, 1229
TseI	GCWGC	6 cut(s)	664, 1790, 1811, 1895, 1916, 1925
Tsp45I	GTSAC	2 cut(s)	592, 1229
TspGWI	ACGGA	2 cut(s)	490, 1821
TspRI	CASTG	1 cut(s)	1882
Tth111I	GACNNNGTC	1 cut(s)	1861
XapI	RAATTY	4 cut(s)	844, 1132, 1447, 1598
XmiI	GTMKAC	2 cut(s)	1349, 1865
XmnI	GAANNNNTTC	1 cut(s)	60
XspI	CTAG	2 cut(s)	128, 1836
ZrmI	AGTACT	1 cut(s)	533

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.