pycom02g04320
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
2834376 .. 2835994
1619 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g04320.2

Sequence Viewer

Length: 1032 bp
ATGCTGCAAATCCTATCGGGGGTTGACTATTGTCATCGGAATATGGTGGTCCACCGCGATTTGAAGCCCTGTAATTTGTTGATTGGGGACGATGGAGTTCTCAAGCTGGCGGATTTTGGTCAGGCTAGGATACTCTTGGAGCCGGGATATGTTCCTGATGAAAACCCACACCCGTATGAACGAAGCGCTCCTAGTCAGAGTGCCTTTCAGCCACCTGAAGTGATTCCCGAAAAAGATGAGTCATGTGAAGAAGGGTACAGAGCTCAAGAACAGGGAACTATGAGCAAAGAGGAATATTTTCGAGTGTTAGATGAGGTCAAGGCAAAAGGTTTGGATAAAGATACAAACGTTCCTGATGGAGATGCATCTTGTCTAGCAACATGTACAGCAAGCGACGTAGACGACGATCTTTTCAGGGGTTCTTATTCTTATGAGGCGGAGGGCGGAAATGATAGAAATGGAGCTCTGACATCCTGTGTTGGGACTCGATGGTTCAGAGCTCCGGAACTACTCTACGGATCCATAGACTATGGTTTAGAGATAGATCTATGGTCGTTGGGCTGCATTTTTGCCGAGCTTTTGACACTTGAGCCACTTTTTCCTGGAACTGCTGATATCGATCAGCTCAGCAGAATCATTAGTGTTCTGGGCAACTTAACTGAGGAGGCGTGGCCCGGGTGTCTTAAACTTCCTGATTACAGGATAATATCGTTCAATAAAGTAGAAAATCCAGTCGGCATAGAGGCCTGCCTGACCAATTGTTCCCCTGCCGAAGTCTCTCTGGTGAAGAAACTTATTTGTTACGACCCAGCTAAGAGAGCTACGGCTATGGAGCTCCTGCAGGACAAGTATTTCAGTGAAGAGCCTCTTCCAGTTCCTCTATCCGAGCTGCACGTCCCTGAGACCAAAGATATGGGTTCCGCCTCTCCTGGTGACTGGCCCGATTACGAAGATATGGGTTCCGACTCTGATTTTGACGACTTTCGCCCTGTAAATACGACCTCAACAGGTTCTCACATTCAGTCTTTTTGA

Protein Analysis

344

Amino Acids

37.94

Weight (kDa)

4.32

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 399
AccII CGCG 1 cut(s) 57
AccIII TCCGGA 1 cut(s) 502
AciI CCGC 5 cut(s) 55, 110, 437, 444, 921
AclI AACGTT 1 cut(s) 348
AclWI GGATC 2 cut(s) 513, 526
AcuI CTGAAG 1 cut(s) 237
AfaI GTAC 2 cut(s) 257, 385
AfeI AGCGCT 1 cut(s) 187
AfiI CCNNNNNNNGG 2 cut(s) 19, 480
AflIII ACRYGT 1 cut(s) 380
AgsI TTSAA 2 cut(s) 64, 715
AjiI CACGTC 1 cut(s) 895
AjnI CCWGG 2 cut(s) 601, 928
Alw21I GWGCWC 4 cut(s) 265, 466, 502, 837
Alw26I GTCTC 2 cut(s) 781, 896
AlwI GGATC 2 cut(s) 513, 526
Ama87I CYCGRG 1 cut(s) 674
Aor13HI TCCGGA 1 cut(s) 502
Aor51HI AGCGCT 1 cut(s) 187
AoxI GGCC 3 cut(s) 671, 744, 938
ApeKI GCWGC 3 cut(s) 4, 561, 889
ArsI GACNNNNNNTTYG 2 cut(s) 956, 988
Asp700I GAANNNNTTC 2 cut(s) 222, 297
AspLEI GCGC 1 cut(s) 188
AspS9I GGNCC 3 cut(s) 49, 672, 939
AsuC2I CCSGG 3 cut(s) 144, 675, 676
AsuHPI GGTGA 2 cut(s) 796, 944
AvaI CYCGRG 1 cut(s) 674
AvaII GGWCC 1 cut(s) 49
BaeI ACNNNNGTAYC 2 cut(s) 333, 366
BamHI GGATCC 1 cut(s) 518
BanII GRGCYC 4 cut(s) 265, 466, 502, 837
Bbv12I GWGCWC 4 cut(s) 265, 466, 502, 837
BbvI GCAGC 2 cut(s) 548, 876
BccI CCATC 3 cut(s) 86, 350, 483
BceAI ACGGC 1 cut(s) 840
BciT130I CCWGG 2 cut(s) 603, 930
BciVI GTATCC 1 cut(s) 123
BcnI CCSGG 3 cut(s) 144, 675, 676
BcoDI GTCTC 2 cut(s) 781, 896
BfaI CTAG 3 cut(s) 126, 192, 374
BfmI CTRYAG 1 cut(s) 839
BfoI RGCGCY 1 cut(s) 189
BfuI GTATCC 1 cut(s) 123
BglII AGATCT 1 cut(s) 544
BisI GCNGC 3 cut(s) 5, 562, 890
BlpI GCTNAGC 1 cut(s) 626
BlsI GCNGC 3 cut(s) 6, 563, 891
Bme1390I CCNGG 5 cut(s) 144, 603, 675, 676, 930
Bme18I GGWCC 1 cut(s) 49
BmeT110I CYCGRG 1 cut(s) 674
BmgBI CACGTC 1 cut(s) 895
BmgT120I GGNCC 3 cut(s) 49, 672, 939
BmiI GGNNCC 4 cut(s) 141, 520, 919, 961
BmrFI CCNGG 5 cut(s) 144, 603, 675, 676, 930
BmsI GCATC 2 cut(s) 352, 374
BoxI GACNNNNGTC 1 cut(s) 30
Bpu1102I GCTNAGC 1 cut(s) 626
BpuEI CTTGAG 3 cut(s) 86, 249, 608
BpuMI CCSGG 3 cut(s) 144, 675, 676
Bsa29I ATCGAT 1 cut(s) 618
BsaBI GATNNNNATC 1 cut(s) 618
BsaI GGTCTC 1 cut(s) 896
BsaJI CCNNGG 1 cut(s) 674
BsaWI WCCGGW 1 cut(s) 502
Bsc4I CCNNNNNNNGG 2 cut(s) 19, 480
Bse1I ACTGG 3 cut(s) 731, 872, 941
Bse8I GATNNNNATC 1 cut(s) 618
BseAI TCCGGA 1 cut(s) 502
BseBI CCWGG 2 cut(s) 603, 930
BseCI ATCGAT 1 cut(s) 618
BseDI CCNNGG 1 cut(s) 674
BseGI GGATG 1 cut(s) 470
BseJI GATNNNNATC 1 cut(s) 618
BseLI CCNNNNNNNGG 2 cut(s) 19, 480
BseMII CTCAG 3 cut(s) 640, 651, 891
BseNI ACTGG 3 cut(s) 731, 872, 941
BseRI GAGGAG 1 cut(s) 677
BseXI GCAGC 2 cut(s) 548, 876
BseYI CCCAGC 1 cut(s) 808
BsgI GTGCAG 1 cut(s) 875
Bsh1236I CGCG 1 cut(s) 57
BshFI GGCC 3 cut(s) 673, 746, 940
BshVI ATCGAT 1 cut(s) 618
BsiHKAI GWGCWC 4 cut(s) 265, 466, 502, 837
BsiHKCI CYCGRG 1 cut(s) 674
BsiSI CCGG 3 cut(s) 143, 503, 675
BslFI GGGAC 3 cut(s) 101, 496, 881
BslI CCNNNNNNNGG 2 cut(s) 19, 480
BsmAI GTCTC 2 cut(s) 781, 896
BsmFI GGGAC 3 cut(s) 101, 496, 881
BsnI GGCC 3 cut(s) 673, 746, 940
Bso31I GGTCTC 1 cut(s) 896
BsoBI CYCGRG 1 cut(s) 674
Bsp1286I GDGCHC 4 cut(s) 265, 466, 502, 837
Bsp13I TCCGGA 1 cut(s) 502
Bsp1407I TGTACA 1 cut(s) 383
Bsp143I GATC 4 cut(s) 406, 518, 544, 619
Bsp1720I GCTNAGC 1 cut(s) 626
BspACI CCGC 5 cut(s) 55, 110, 437, 444, 921
BspANI GGCC 3 cut(s) 673, 746, 940
BspCNI CTCAG 3 cut(s) 639, 652, 892
BspDI ATCGAT 1 cut(s) 618
BspEI TCCGGA 1 cut(s) 502
BspFNI CGCG 1 cut(s) 57
BspLI GGNNCC 4 cut(s) 141, 520, 919, 961
BspMAI CTGCAG 1 cut(s) 843
BspPI GGATC 2 cut(s) 513, 526
BspQI GCTCTTC 1 cut(s) 855
BspTNI GGTCTC 1 cut(s) 896
BsrGI TGTACA 1 cut(s) 383
BsrI ACTGG 3 cut(s) 731, 872, 941
BssECI CCNNGG 1 cut(s) 674
BssMI GATC 4 cut(s) 406, 518, 544, 619
Bst2UI CCWGG 2 cut(s) 603, 930
Bst6I CTCTTC 2 cut(s) 855, 873
BstAUI TGTACA 1 cut(s) 383
BstC8I GCNNGC 3 cut(s) 108, 391, 748
BstDEI CTNAG 4 cut(s) 626, 660, 813, 900
BstF5I GGATG 1 cut(s) 470
BstFNI CGCG 1 cut(s) 57
BstH2I RGCGCY 1 cut(s) 189
BstHHI GCGC 1 cut(s) 188
BstKTI GATC 4 cut(s) 409, 521, 547, 622
BstMAI GTCTC 2 cut(s) 781, 896
BstMBI GATC 4 cut(s) 406, 518, 544, 619
BstMWI GCNNNNNNNGC 1 cut(s) 818
BstNI CCWGG 2 cut(s) 603, 930
BstNSI RCATGY 1 cut(s) 384
BstPAI GACNNNNGTC 1 cut(s) 30
BstSCI CCNGG 5 cut(s) 142, 601, 673, 674, 928
BstSFI CTRYAG 1 cut(s) 839
BstUI CGCG 1 cut(s) 57
BstV1I GCAGC 2 cut(s) 548, 876
BstX2I RGATCY 2 cut(s) 518, 544
BstXI CCANNNNNNTGG 1 cut(s) 913
BstYI RGATCY 2 cut(s) 518, 544
Bsu15I ATCGAT 1 cut(s) 618
BsuI GTATCC 1 cut(s) 123
BsuRI GGCC 3 cut(s) 673, 746, 940
BsuTUI ATCGAT 1 cut(s) 618
BtrI CACGTC 1 cut(s) 895
BtsCI GGATG 1 cut(s) 470
BtsIMutI CAGTG 1 cut(s) 862
Cac8I GCNNGC 3 cut(s) 108, 391, 748
CfoI GCGC 1 cut(s) 188
Cfr13I GGNCC 3 cut(s) 49, 672, 939
Cfr9I CCCGGG 1 cut(s) 674
ClaI ATCGAT 1 cut(s) 618
Csp6I GTAC 2 cut(s) 256, 384
CviAII CATG 2 cut(s) 243, 381
CviQI GTAC 2 cut(s) 256, 384
DdeI CTNAG 4 cut(s) 626, 660, 813, 900
DpnI GATC 4 cut(s) 408, 520, 546, 621
DpnII GATC 4 cut(s) 406, 518, 544, 619
Eam1104I CTCTTC 2 cut(s) 855, 873
EarI CTCTTC 2 cut(s) 855, 873
EciI GGCGGA 4 cut(s) 125, 452, 459, 910
Ecl136II GAGCTC 4 cut(s) 263, 464, 500, 835
Eco147I AGGCCT 1 cut(s) 746
Eco24I GRGCYC 4 cut(s) 265, 466, 502, 837
Eco31I GGTCTC 1 cut(s) 896
Eco32I GATATC 1 cut(s) 616
Eco47I GGWCC 1 cut(s) 49
Eco47III AGCGCT 1 cut(s) 187
Eco53kI GAGCTC 4 cut(s) 263, 464, 500, 835
Eco57I CTGAAG 1 cut(s) 237
Eco88I CYCGRG 1 cut(s) 674
EcoICRI GAGCTC 4 cut(s) 263, 464, 500, 835
EcoRII CCWGG 2 cut(s) 601, 928
EcoRV GATATC 1 cut(s) 616
EcoT22I ATGCAT 1 cut(s) 367
EcoT38I GRGCYC 4 cut(s) 265, 466, 502, 837
FaeI CATG 2 cut(s) 246, 384
FalI AAGNNNNNCTT 2 cut(s) 852, 884
FaqI GGGAC 3 cut(s) 101, 496, 881
FatI CATG 2 cut(s) 242, 380
FblI GTMKAC 1 cut(s) 399
Fnu4HI GCNGC 3 cut(s) 5, 562, 890
FokI GGATG 1 cut(s) 457
FriOI GRGCYC 4 cut(s) 265, 466, 502, 837
Fsp4HI GCNGC 3 cut(s) 5, 562, 890
FspBI CTAG 3 cut(s) 126, 192, 374
GlaI GCGC 1 cut(s) 187
GluI GCNGC 3 cut(s) 5, 562, 890
GsaI CCCAGC 1 cut(s) 812
HaeII RGCGCY 1 cut(s) 189
HaeIII GGCC 3 cut(s) 673, 746, 940
HapII CCGG 3 cut(s) 143, 503, 675
HhaI GCGC 1 cut(s) 188
Hin1II CATG 2 cut(s) 246, 384
Hin6I GCGC 1 cut(s) 186
HinP1I GCGC 1 cut(s) 186
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HinfI GANTC 5 cut(s) 223, 239, 484, 633, 965
HpaII CCGG 3 cut(s) 143, 503, 675
HphI GGTGA 2 cut(s) 796, 944
Hpy166II GTNNAC 3 cut(s) 25, 52, 400
Hpy188I TCNGA 7 cut(s) 39, 198, 468, 497, 886, 964, 970
Hpy188III TCNNGA 6 cut(s) 155, 227, 266, 353, 503, 692
Hpy8I GTNNAC 3 cut(s) 25, 52, 400
Hpy99I CGWCG 2 cut(s) 398, 407
HpyAV CCTTC 1 cut(s) 245
HpyCH4IV ACGT 3 cut(s) 348, 396, 894
HpyCH4V TGCA 5 cut(s) 7, 365, 564, 841, 892
HpyF10VI GCNNNNNNNGC 1 cut(s) 818
HpyF3I CTNAG 4 cut(s) 626, 660, 813, 900
HpySE526I ACGT 3 cut(s) 348, 396, 894
Hsp92II CATG 2 cut(s) 246, 384
HspAI GCGC 1 cut(s) 186
Kpn2I TCCGGA 1 cut(s) 502
Kzo9I GATC 4 cut(s) 406, 518, 544, 619
LguI GCTCTTC 1 cut(s) 855
LmnI GCTCC 6 cut(s) 139, 193, 461, 505, 832, 840
Lsp1109I GCAGC 2 cut(s) 548, 876
LweI GCATC 2 cut(s) 352, 374
MaeI CTAG 3 cut(s) 126, 192, 374
MaeII ACGT 3 cut(s) 348, 396, 894
MaeIII GTNAC 2 cut(s) 800, 932
MalI GATC 4 cut(s) 408, 520, 546, 621
MboI GATC 4 cut(s) 406, 518, 544, 619
MboII GAAGA 5 cut(s) 260, 799, 860, 872, 962
MfeI CAATTG 1 cut(s) 757
MflI RGATCY 2 cut(s) 518, 544
MhlI GDGCHC 4 cut(s) 265, 466, 502, 837
MluCI AATT 2 cut(s) 73, 757
MlyI GAGTC 3 cut(s) 248, 478, 959
MmeI TCCRAC 1 cut(s) 987
Mph1103I ATGCAT 1 cut(s) 367
MroI TCCGGA 1 cut(s) 502
MroXI GAANNNNTTC 2 cut(s) 222, 297
MseI TTAA 2 cut(s) 656, 684
MslI CAYNNNNRTG 1 cut(s) 174
MspI CCGG 3 cut(s) 143, 503, 675
MspR9I CCNGG 5 cut(s) 144, 603, 675, 676, 930
MunI CAATTG 1 cut(s) 757
MvaI CCWGG 2 cut(s) 603, 930
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 1 cut(s) 818
NciI CCSGG 3 cut(s) 144, 675, 676
NdeII GATC 4 cut(s) 406, 518, 544, 619
NlaIII CATG 2 cut(s) 246, 384
NlaIV GGNNCC 4 cut(s) 141, 520, 919, 961
NmeAIII GCCGAG 1 cut(s) 598
NmuCI GTSAC 1 cut(s) 932
NsiI ATGCAT 1 cut(s) 367
NspI RCATGY 1 cut(s) 384
PceI AGGCCT 1 cut(s) 746
PciI ACATGT 1 cut(s) 380
PciSI GCTCTTC 1 cut(s) 855
PcsI WCGNNNNNNNCGW 1 cut(s) 402
PdmI GAANNNNTTC 2 cut(s) 222, 297
PfeI GAWTC 2 cut(s) 223, 633
PfoI TCCNGGA 1 cut(s) 601
PkrI GCNGC 3 cut(s) 6, 563, 891
PleI GAGTC 3 cut(s) 247, 478, 959
PpsI GAGTC 3 cut(s) 247, 478, 959
PscI ACATGT 1 cut(s) 380
PshAI GACNNNNGTC 1 cut(s) 30
Psp124BI GAGCTC 4 cut(s) 265, 466, 502, 837
Psp1406I AACGTT 1 cut(s) 348
Psp6I CCWGG 2 cut(s) 601, 928
PspFI CCCAGC 1 cut(s) 808
PspGI CCWGG 2 cut(s) 601, 928
PspN4I GGNNCC 4 cut(s) 141, 520, 919, 961
PspPI GGNCC 3 cut(s) 49, 672, 939
PstI CTGCAG 1 cut(s) 843
PsuI RGATCY 2 cut(s) 518, 544
RsaI GTAC 2 cut(s) 257, 385
RsaNI GTAC 2 cut(s) 256, 384
RseI CAYNNNNRTG 1 cut(s) 174
SacI GAGCTC 4 cut(s) 265, 466, 502, 837
SapI GCTCTTC 1 cut(s) 855
SaqAI TTAA 2 cut(s) 656, 684
SatI GCNGC 3 cut(s) 5, 562, 890
Sau3AI GATC 4 cut(s) 406, 518, 544, 619
Sau96I GGNCC 3 cut(s) 49, 672, 939
SbfI CCTGCAGG 1 cut(s) 843
SchI GAGTC 3 cut(s) 248, 478, 959
ScrFI CCNGG 5 cut(s) 144, 603, 675, 676, 930
SdaI CCTGCAGG 1 cut(s) 843
SduI GDGCHC 4 cut(s) 265, 466, 502, 837
SfaNI GCATC 2 cut(s) 352, 374
SfcI CTRYAG 1 cut(s) 839
SinI GGWCC 1 cut(s) 49
SmaI CCCGGG 1 cut(s) 676
SmiMI CAYNNNNRTG 1 cut(s) 174
SmlI CTYRAG 3 cut(s) 101, 264, 587
SmoI CTYRAG 3 cut(s) 101, 264, 587
Sse8387I CCTGCAGG 1 cut(s) 843
Sse9I AATT 2 cut(s) 73, 757
SseBI AGGCCT 1 cut(s) 746
SsiI CCGC 5 cut(s) 55, 110, 437, 444, 921
SspI AATATT 1 cut(s) 296
SspMI CTAG 3 cut(s) 126, 192, 374
SstI GAGCTC 4 cut(s) 265, 466, 502, 837
StuI AGGCCT 1 cut(s) 746
StyD4I CCNGG 5 cut(s) 142, 601, 673, 674, 928
TaiI ACGT 3 cut(s) 351, 399, 897
TaqI TCGA 3 cut(s) 301, 487, 618
TasI AATT 2 cut(s) 73, 757
TatI WGTACW 1 cut(s) 383
TfiI GAWTC 2 cut(s) 223, 633
Tru1I TTAA 2 cut(s) 656, 684
Tru9I TTAA 2 cut(s) 656, 684
TscAI CASTG 1 cut(s) 862
TseFI GTSAC 1 cut(s) 932
TseI GCWGC 3 cut(s) 4, 561, 889
Tsp45I GTSAC 1 cut(s) 932
TspDTI ATGAA 2 cut(s) 174, 192
TspGWI ACGGA 1 cut(s) 531
TspMI CCCGGG 1 cut(s) 674
TspRI CASTG 1 cut(s) 862
VpaK11BI GGWCC 1 cut(s) 49
XceI RCATGY 1 cut(s) 384
XmaI CCCGGG 1 cut(s) 674
XmiI GTMKAC 1 cut(s) 399
XmnI GAANNNNTTC 2 cut(s) 222, 297
XspI CTAG 3 cut(s) 126, 192, 374
Zsp2I ATGCAT 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.