Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0011073

Physical Location & Seq

Genomic Coordinates Reverse (-)

3083549 .. 3087008

Gene Structure 3460 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g04750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

ATGATTAGAATTTTGGGTCAGTCTCAAAATTTCAAATTTCCAATGTTTCATTCAAGTTTGATTGGTTTTTTGCTTCTGAATTTTCTGGTGTTCCTTGTAGAAGCACAACCTACAGGCATAGAATATTCTACTGATGAACAACTAAACTTTCAACCAAGTATTGCTTTGGTGATTGGAGTTCTAGCAATCTTCTTTGCACTGACTTTTTTCTTCCTTGTATATGTGAAATTCTGCCACGGAAGGGCTTATGTGGTAGGAAACAACCATCTCCAGGCAACAGGACTTGTCACCGCAAGCGCTCGATTTTCCGGTATTGACAAGACAGTGATTGAGGCCCTTCCCTTTTTCAAATTTTCTTCACTGAAAGGGTCGAAAGAAGGCCTCGAATGCGCAGTCTGTCTGTCGAAATTCGAAGATATTGAAATCCTCAGGCTGCTTCCCAAATGCAAACATGCTTTTCACATCAGCTGCATTGATCACTGGCTTGAAAAACACTCGAGCTGTCCTCTCTGCAGGCACAGGGTTAGTTCCGAGGACTTAACTTCCATTACCTACTCAAACAGCATGAGATGGATTAATCAATCAGAGTGCCGCCAGGACTCGAACATAGAGCTCTTTGTTCAGAGAGAGGAGGATCACCACGGTTCTTCAAGATTCAGTGTGGGAAGCAGCTTTCGAAAAGTTGAAAATGCGATTGATAAGGAACTGTTGATCCAAGAAGTTGCTGATGTGACAGAGGAAGGTCAGAAGATCCTGCACAAGCACAAGCACAAAATTGTTGTTTCGGATCTTGAGTTTAAGAACAGATGGAGCAATGTGAGTTCCTCTGACCTCCTGTTCTTGAATTCTGAGATGCTTAACACGATGTCAAGCGATAGGTTCTCTTTCAGACAATTAAAGGATGAGCAGTTTTCGCCTGTGAAAGCAACACGAAATCAGGAGATTGTGAAGATTAGGGAGGAAATGGAGATGAAGAGATTGTTTGAGGAAAAATTTAGTACAATGAGCAAACATAGTTCAGCTTTGGTTCCTTCTGCTTCAGATAGCATAGAGACGTCAGCTCATGCCTCAAGTTCTGTGAATCAAGGCGAGAAAAGATCCATGTCCGAAATCACTGGTCTTTCGAGATTTGGGAATTTGGGTTTTAAGAACAGGACTAGAGAGCTTTCTCTGCTTGAAAACAATGCGAAGGAAGAAAGAACAAGGCGGCTTTGGTTGCCGATTGCCAGAAGAACAGTCCACTGGTTTGCCAACAGAGAGAAAAGGTCTCCACAGCCTCAACGGCCTTTAGATTTCCTTTTTTCGTTTGCAGAATGCTTCGAAAAGATGATTAAAATTTTGGGTTGTCAATATTTCGATCTTCCAATGTTTCATTCAAGCTTGTTTGTTTTGCTTCTCAACTGTGTGGTCTTCCATGTTGAATCACAAGCCCCAGATGTGTCTTCTGATGAAGGAAATAAATATCAATCAGGTGTTCATATGGTTATCGGTGTTCTATCTATCATGTTTTCATTAACTTTTGTGCTCCTAGTGTATGCCAAATACTGCTATAGAAGAGTTCCTGTTCGACAAAACAGTCTCCTGGAAACAGGACTTATCAGTAGTAGTTCTCGGTTCTCTGGGATTGACAAGACAGCGATTGAGGCACTTCCCTTTTTCAGATTCTCTTCTCTCAAAGGGTCAAAGGAAGGTCTCGAATGCGCAGTCTGCCTATCGAAATTTGAAGATATTGAGATTCTTAGATTGCTGCCAAAATGCAAACATGCTTTTCACATCAGCTGCATTGATCACTGGCTGGAAAAGCACTCAAGCTGTCCTCTCTGCCGGCACAGGGTTAGCTCTGAGGATCTTACATTCGATACCTTCTCAAATAGCATGAGGATCTTGTCGAATAACCAATCAGAGAATCAACATGACTCGAGCATAGATCTCTTTGTTCAGAGAGAGGAAGATCACCGCGGTTCTTCGAGATTCAACGTAGGACGCAGCTTTCGAAAAAGCGAAAAGGCGGTTGAGAAGGAAGATGAATTGTTAATCAAGGAAGAAGCTGCTCGTAGTGATGTGACAAAAGAGGATGACAAAATCCTGCACAAGCACAAACACAAAATTCTTTTTTCTGCTCTCGAGTTCAACAACAGATGGAGCAATCTGAGTCCATCTGATCTTATGTTCTTGAATTCGGAGATGCTCAACACGGTGTCAAGCAACAGATTCTCTCCCACAAAATTAAACGATGAGCAGTTTTTGACCGCGAAAGCAACGGGAAATGAGGAGATTATGAAGATCAGGGAGGAGATGGAGATGAAAAGATTGTTTGAGAACAAAGTTAGCACAATGAACAAAAACAGTTCAGCTACAAAGTCAATTGTTCCCTCTACATCTGATACTACAGCCACTTCAGCTCATGCCTTGAGTTCTACGAATCTAGGAGGGAAAAGATCAATGTCCGAAATCACTGCTCTTCCGAGATTTGGGAACTTGGGCTCCAAGGACAGGACTAGAGAGCCTTCACTGCTCGAAAACAATGCGAAAGAGGAAAGAATGAGGCGGCTTTGGATGCCGATTGCCCGAAGAACAGTCCAGTCGTTTGCCAATAGAGAGAAAAGGTGTCCACAGCCCTTAGATGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

877

Amino Acids

100.34

Weight (kDa)

8.61

Isoelectric Point (pI)

61.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	129 - 172	3e-12	Ring finger domain
zf-C3HC4_2	PF13923	129 - 171	1.2e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	129 - 158	2.1e-07	RING-like zinc finger
zf-C3HC4	PF00097	130 - 171	1.1e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	133 - 172	8.4e-08	RING-H2 zinc finger domain
zf-RING_2	PF13639	566 - 609	3e-12	Ring finger domain
zf-C3HC4_2	PF13923	566 - 608	1.2e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	566 - 595	2.1e-07	RING-like zinc finger
zf-C3HC4	PF00097	567 - 608	1.1e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	570 - 609	8.4e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011073)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20030 AT4G28890
fragaria_vesca	FvH4_1g05750
malus_domestica	MD02G1058600.v1.1 MD02G1058700.v1.1 MD15G1192900.v1.1 MD15G1193000.v1.1
prunus_persica	Prupe.7G224300_v2.0.a1
pyrus_communis	pycom02g04750 pycom15g17270 pycom15g17280
rosa_chinensis	RchiOBHm_Chr2g0091391
rosa_laevigata	RLG00000016220
rosa_multiflora	Rmu_ssc0000333.1_g000003
rosa_rugosa	Rorug02G0017400
rosa_samantha	Rh2AG062400 Rh2BG061400 Rh2CG063500 Rh2DG062000
rosa_wichuraiana	Rw2G005780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1575
AatII	GACGTC	1 cut(s)	1058
Acc16I	TGCGCA	2 cut(s)	391, 1702
AccII	CGCG	2 cut(s)	1959, 2252
AciI	CCGC	8 cut(s)	291, 592, 1207, 1957, 1959, 2009, 2250, 2548
AclWI	GGATC	7 cut(s)	642, 706, 745, 795, 1092, 1854, 1889
AcuI	CTGAAG	2 cut(s)	1023, 2382
AcyI	GRCGYC	1 cut(s)	1055
AfaI	GTAC	1 cut(s)	1000
AfeI	AGCGCT	1 cut(s)	298
AfiI	CCNNNNNNNGG	5 cut(s)	241, 271, 1831, 2471, 2493
AjnI	CCWGG	3 cut(s)	270, 594, 1581
AjuI	GAANNNNNNNTTGG	4 cut(s)	34, 66, 1357, 1389
AloI	GAACNNNNNNTCC	4 cut(s)	696, 728, 2468, 2500
Alw21I	GWGCWC	2 cut(s)	615, 1527
Alw26I	GTCTC	5 cut(s)	27, 1046, 1272, 1583, 1697
AlwI	GGATC	7 cut(s)	642, 706, 745, 795, 1092, 1854, 1889
Ama87I	CYCGRG	3 cut(s)	496, 1918, 2123
Aor51HI	AGCGCT	1 cut(s)	298
AoxI	GGCC	3 cut(s)	333, 379, 1283
ApeKI	GCWGC	7 cut(s)	433, 468, 669, 1747, 1779, 1986, 2048
ArsI	GACNNNNNNTTYG	6 cut(s)	378, 410, 1689, 1721, 1974, 2006
AseI	ATTAAT	1 cut(s)	576
AspLEI	GCGC	3 cut(s)	299, 392, 1703
AspS9I	GGNCC	1 cut(s)	334
AsuHPI	GGTGA	4 cut(s)	181, 280, 629, 1946
AsuII	TTCGAA	4 cut(s)	411, 676, 1320, 1993
AvaI	CYCGRG	3 cut(s)	496, 1918, 2123
AxyI	CCTNAGG	1 cut(s)	428
BanII	GRGCYC	2 cut(s)	615, 2486
BbsI	GAAGAC	2 cut(s)	1402, 1434
Bbv12I	GWGCWC	2 cut(s)	615, 1527
BbvI	GCAGC	7 cut(s)	420, 455, 681, 1734, 1766, 1998, 2035
BccI	CCATC	6 cut(s)	273, 564, 801, 2133, 2164, 2290
BceAI	ACGGC	1 cut(s)	1298
BcgI	CGANNNNNNTGC	4 cut(s)	2438, 2472, 2507, 2541
BciT130I	CCWGG	3 cut(s)	272, 596, 1583
BclI	TGATCA	2 cut(s)	475, 1786
BcoDI	GTCTC	5 cut(s)	27, 1046, 1272, 1583, 1697
BfaI	CTAG	5 cut(s)	182, 1158, 1529, 2426, 2499
BfmI	CTRYAG	4 cut(s)	111, 511, 1549, 2388
BfoI	RGCGCY	1 cut(s)	300
BglI	GCCNNNNNGGC	1 cut(s)	1282
BglII	AGATCT	1 cut(s)	1927
Bme1390I	CCNGG	3 cut(s)	272, 596, 1583
BmeT110I	CYCGRG	3 cut(s)	496, 1918, 2123
BmgT120I	GGNCC	1 cut(s)	334
BmiI	GGNNCC	2 cut(s)	1029, 2485
BmrFI	CCNGG	3 cut(s)	272, 596, 1583
BmsI	GCATC	3 cut(s)	843, 2175, 2547
BpiI	GAAGAC	2 cut(s)	1402, 1434
BplI	GAGNNNNNCTC	2 cut(s)	490, 522
BpmI	CTGGAG	1 cut(s)	254
Bpu14I	TTCGAA	4 cut(s)	411, 676, 1320, 1993
BpuEI	CTTGAG	4 cut(s)	812, 1054, 1792, 2431
BsaHI	GRCGYC	1 cut(s)	1055
BsaI	GGTCTC	2 cut(s)	1272, 1697
BsaJI	CCNNGG	5 cut(s)	235, 531, 640, 1957, 2487
BsaWI	WCCGGW	1 cut(s)	308
BsaXI	ACNNNNNCTCC	2 cut(s)	2468, 2498
Bsc4I	CCNNNNNNNGG	5 cut(s)	241, 271, 1831, 2471, 2493
Bse118I	RCCGGY	1 cut(s)	1824
Bse1I	ACTGG	5 cut(s)	485, 1120, 1247, 1796, 2581
Bse21I	CCTNAGG	1 cut(s)	428
Bse3DI	GCAATG	1 cut(s)	820
BseBI	CCWGG	3 cut(s)	272, 596, 1583
BseDI	CCNNGG	5 cut(s)	235, 531, 640, 1957, 2487
BseGI	GGATG	3 cut(s)	907, 2080, 2562
BseLI	CCNNNNNNNGG	5 cut(s)	241, 271, 1831, 2471, 2493
BseMI	GCAATG	1 cut(s)	820
BseMII	CTCAG	4 cut(s)	442, 840, 1833, 2141
BseNI	ACTGG	5 cut(s)	485, 1120, 1247, 1796, 2581
BseRI	GAGGAG	3 cut(s)	644, 2285, 2306
BseXI	GCAGC	7 cut(s)	420, 455, 681, 1734, 1766, 1998, 2035
BsgI	GTGCAG	2 cut(s)	740, 2072
Bsh1236I	CGCG	2 cut(s)	1959, 2252
BshFI	GGCC	3 cut(s)	335, 381, 1285
BsiHKAI	GWGCWC	2 cut(s)	615, 1527
BsiHKCI	CYCGRG	3 cut(s)	496, 1918, 2123
BsiSI	CCGG	2 cut(s)	309, 1825
BslI	CCNNNNNNNGG	5 cut(s)	241, 271, 1831, 2471, 2493
BsmAI	GTCTC	5 cut(s)	27, 1046, 1272, 1583, 1697
BsmBI	CGTCTC	1 cut(s)	1046
BsmI	GAATGC	3 cut(s)	392, 1319, 1703
BsnI	GGCC	3 cut(s)	335, 381, 1285
Bso31I	GGTCTC	2 cut(s)	1272, 1697
BsoBI	CYCGRG	3 cut(s)	496, 1918, 2123
Bsp119I	TTCGAA	4 cut(s)	411, 676, 1320, 1993
Bsp1286I	GDGCHC	3 cut(s)	615, 1527, 2486
BspACI	CCGC	8 cut(s)	291, 592, 1207, 1957, 1959, 2009, 2250, 2548
BspANI	GGCC	3 cut(s)	335, 381, 1285
BspCNI	CTCAG	4 cut(s)	441, 841, 1834, 2142
BspFNI	CGCG	2 cut(s)	1959, 2252
BspLI	GGNNCC	2 cut(s)	1029, 2485
BspMAI	CTGCAG	1 cut(s)	515
BspPI	GGATC	7 cut(s)	642, 706, 745, 795, 1092, 1854, 1889
BspQI	GCTCTTC	1 cut(s)	2466
BspT104I	TTCGAA	4 cut(s)	411, 676, 1320, 1993
BspTNI	GGTCTC	2 cut(s)	1272, 1697
BsrDI	GCAATG	1 cut(s)	820
BsrFI	RCCGGY	1 cut(s)	1824
BsrI	ACTGG	5 cut(s)	485, 1120, 1247, 1796, 2581
BssAI	RCCGGY	1 cut(s)	1824
BssECI	CCNNGG	5 cut(s)	235, 531, 640, 1957, 2487
BssNI	GRCGYC	1 cut(s)	1055
BssT1I	CCWWGG	1 cut(s)	2487
Bst2UI	CCWGG	3 cut(s)	272, 596, 1583
Bst4CI	ACNGT	9 cut(s)	325, 644, 708, 1237, 1403, 1577, 2197, 2348, 2578
Bst6I	CTCTTC	4 cut(s)	968, 1549, 1672, 2466
BstACI	GRCGYC	1 cut(s)	1055
BstBI	TTCGAA	4 cut(s)	411, 676, 1320, 1993
BstC8I	GCNNGC	3 cut(s)	295, 515, 1826
BstDEI	CTNAG	6 cut(s)	428, 849, 1739, 1842, 2150, 2620
BstDSI	CCRYGG	3 cut(s)	235, 640, 1957
BstF5I	GGATG	3 cut(s)	907, 2080, 2562
BstFNI	CGCG	2 cut(s)	1959, 2252
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	3 cut(s)	299, 392, 1703
BstMAI	GTCTC	5 cut(s)	27, 1046, 1272, 1583, 1697
BstNI	CCWGG	3 cut(s)	272, 596, 1583
BstNSI	RCATGY	2 cut(s)	455, 1766
BstSCI	CCNGG	3 cut(s)	270, 594, 1581
BstSFI	CTRYAG	4 cut(s)	111, 511, 1549, 2388
BstUI	CGCG	2 cut(s)	1959, 2252
BstV1I	GCAGC	7 cut(s)	420, 455, 681, 1734, 1766, 1998, 2035
BstV2I	GAAGAC	2 cut(s)	1402, 1434
BstX2I	RGATCY	6 cut(s)	750, 787, 1097, 1846, 1881, 1927
BstYI	RGATCY	6 cut(s)	750, 787, 1097, 1846, 1881, 1927
Bsu36I	CCTNAGG	1 cut(s)	428
BsuRI	GGCC	3 cut(s)	335, 381, 1285
BtgI	CCRYGG	3 cut(s)	235, 640, 1957
BtsCI	GGATG	3 cut(s)	907, 2080, 2562
BtsI	GCAGTG	2 cut(s)	2454, 2510
Cac8I	GCNNGC	3 cut(s)	295, 515, 1826
CfoI	GCGC	3 cut(s)	299, 392, 1703
Cfr10I	RCCGGY	1 cut(s)	1824
Cfr13I	GGNCC	1 cut(s)	334
Cfr42I	CCGCGG	1 cut(s)	1960
CseI	GACGC	1 cut(s)	1992
Csp6I	GTAC	1 cut(s)	999
CviQI	GTAC	1 cut(s)	999
DdeI	CTNAG	6 cut(s)	428, 849, 1739, 1842, 2150, 2620
DrdI	GACNNNNNNGTC	1 cut(s)	1575
DseDI	GACNNNNNNGTC	1 cut(s)	1575
Eam1104I	CTCTTC	4 cut(s)	968, 1549, 1672, 2466
EarI	CTCTTC	4 cut(s)	968, 1549, 1672, 2466
Ecl136II	GAGCTC	1 cut(s)	613
Eco130I	CCWWGG	1 cut(s)	2487
Eco147I	AGGCCT	1 cut(s)	381
Eco24I	GRGCYC	2 cut(s)	615, 2486
Eco31I	GGTCTC	2 cut(s)	1272, 1697
Eco47III	AGCGCT	1 cut(s)	298
Eco53kI	GAGCTC	1 cut(s)	613
Eco57I	CTGAAG	2 cut(s)	1023, 2382
Eco81I	CCTNAGG	1 cut(s)	428
Eco88I	CYCGRG	3 cut(s)	496, 1918, 2123
EcoICRI	GAGCTC	1 cut(s)	613
EcoO109I	RGGNCCY	1 cut(s)	334
EcoRI	GAATTC	2 cut(s)	844, 2176
EcoRII	CCWGG	3 cut(s)	270, 594, 1581
EcoT14I	CCWWGG	1 cut(s)	2487
EcoT38I	GRGCYC	2 cut(s)	615, 2486
ErhI	CCWWGG	1 cut(s)	2487
Esp3I	CGTCTC	1 cut(s)	1046
FalI	AAGNNNNNCTT	2 cut(s)	148, 180
FauNDI	CATATG	1 cut(s)	1479
FbaI	TGATCA	2 cut(s)	475, 1786
FokI	GGATG	3 cut(s)	914, 2087, 2569
FriOI	GRGCYC	2 cut(s)	615, 2486
FspBI	CTAG	5 cut(s)	182, 1158, 1529, 2426, 2499
FspI	TGCGCA	2 cut(s)	391, 1702
GlaI	GCGC	3 cut(s)	298, 391, 1702
GsuI	CTGGAG	1 cut(s)	254
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	3 cut(s)	335, 381, 1285
HapII	CCGG	2 cut(s)	309, 1825
HgaI	GACGC	1 cut(s)	1992
HhaI	GCGC	3 cut(s)	299, 392, 1703
Hin1I	GRCGYC	1 cut(s)	1055
Hin6I	GCGC	3 cut(s)	297, 390, 1701
HinP1I	GCGC	3 cut(s)	297, 390, 1701
HindIII	AAGCTT	1 cut(s)	1378
HpaII	CCGG	2 cut(s)	309, 1825
HphI	GGTGA	4 cut(s)	181, 280, 629, 1946
Hpy166II	GTNNAC	2 cut(s)	1240, 2612
Hpy188III	TCNNGA	9 cut(s)	651, 791, 841, 938, 1125, 1694, 1968, 2123, 2173
Hpy8I	GTNNAC	2 cut(s)	1240, 2612
HpyCH4III	ACNGT	9 cut(s)	325, 644, 708, 1237, 1403, 1577, 2197, 2348, 2578
HpyCH4IV	ACGT	2 cut(s)	1055, 1977
HpyCH4V	TGCA	9 cut(s)	197, 447, 471, 513, 757, 1310, 1758, 1782, 2089
HpyF3I	CTNAG	6 cut(s)	428, 849, 1739, 1842, 2150, 2620
HpySE526I	ACGT	2 cut(s)	1055, 1977
Hsp92I	GRCGYC	1 cut(s)	1055
HspAI	GCGC	3 cut(s)	297, 390, 1701
KroI	GCCGGC	1 cut(s)	1824
KroNI	GCCGGC	1 cut(s)	1826
Ksp22I	TGATCA	2 cut(s)	475, 1786
KspI	CCGCGG	1 cut(s)	1960
LguI	GCTCTTC	1 cut(s)	2466
LmnI	GCTCC	4 cut(s)	810, 1530, 2142, 2489
Lsp1109I	GCAGC	7 cut(s)	420, 455, 681, 1734, 1766, 1998, 2035
LweI	GCATC	3 cut(s)	843, 2175, 2547
MaeI	CTAG	5 cut(s)	182, 1158, 1529, 2426, 2499
MaeII	ACGT	2 cut(s)	1055, 1977
MaeIII	GTNAC	3 cut(s)	286, 730, 2062
MfeI	CAATTG	1 cut(s)	2364
MflI	RGATCY	6 cut(s)	750, 787, 1097, 1846, 1881, 1927
MhlI	GDGCHC	3 cut(s)	615, 1527, 2486
MlyI	GAGTC	3 cut(s)	593, 1910, 2161
MroNI	GCCGGC	1 cut(s)	1824
MspA1I	CMGCKG	3 cut(s)	468, 1779, 1959
MspI	CCGG	2 cut(s)	309, 1825
MspR9I	CCNGG	3 cut(s)	272, 596, 1583
MunI	CAATTG	1 cut(s)	2364
Mva1269I	GAATGC	3 cut(s)	392, 1319, 1703
MvaI	CCWGG	3 cut(s)	272, 596, 1583
MvnI	CGCG	2 cut(s)	1959, 2252
NaeI	GCCGGC	1 cut(s)	1826
NdeI	CATATG	1 cut(s)	1479
NgoMIV	GCCGGC	1 cut(s)	1824
NlaIV	GGNNCC	2 cut(s)	1029, 2485
NmuCI	GTSAC	3 cut(s)	286, 730, 2062
NsbI	TGCGCA	2 cut(s)	391, 1702
NspI	RCATGY	2 cut(s)	455, 1766
NspV	TTCGAA	4 cut(s)	411, 676, 1320, 1993
PaeR7I	CTCGAG	3 cut(s)	496, 1918, 2123
PceI	AGGCCT	1 cut(s)	381
PciSI	GCTCTTC	1 cut(s)	2466
PcsI	WCGNNNNNNNCGW	1 cut(s)	1990
PctI	GAATGC	3 cut(s)	392, 1319, 1703
PdiI	GCCGGC	1 cut(s)	1826
PfeI	GAWTC	9 cut(s)	654, 1081, 1421, 1662, 1735, 1906, 1971, 2211, 2422
PfoI	TCCNGGA	1 cut(s)	1581
PleI	GAGTC	3 cut(s)	593, 1910, 2160
PpsI	GAGTC	3 cut(s)	593, 1910, 2160
PshBI	ATTAAT	1 cut(s)	576
Psp124BI	GAGCTC	1 cut(s)	615
Psp6I	CCWGG	3 cut(s)	270, 594, 1581
PspGI	CCWGG	3 cut(s)	270, 594, 1581
PspN4I	GGNNCC	2 cut(s)	1029, 2485
PspPI	GGNCC	1 cut(s)	334
PspXI	VCTCGAGB	2 cut(s)	496, 1918
PstI	CTGCAG	1 cut(s)	515
PsuI	RGATCY	6 cut(s)	750, 787, 1097, 1846, 1881, 1927
PvuII	CAGCTG	2 cut(s)	468, 1779
RsaI	GTAC	1 cut(s)	1000
RsaNI	GTAC	1 cut(s)	999
SacI	GAGCTC	1 cut(s)	615
SacII	CCGCGG	1 cut(s)	1960
SapI	GCTCTTC	1 cut(s)	2466
Sau96I	GGNCC	1 cut(s)	334
SchI	GAGTC	3 cut(s)	593, 1910, 2161
ScrFI	CCNGG	3 cut(s)	272, 596, 1583
SduI	GDGCHC	3 cut(s)	615, 1527, 2486
SfaNI	GCATC	3 cut(s)	843, 2175, 2547
SfcI	CTRYAG	4 cut(s)	111, 511, 1549, 2388
Sfr274I	CTCGAG	3 cut(s)	496, 1918, 2123
Sfr303I	CCGCGG	1 cut(s)	1960
SfuI	TTCGAA	4 cut(s)	411, 676, 1320, 1993
SgrBI	CCGCGG	1 cut(s)	1960
SlaI	CTCGAG	3 cut(s)	496, 1918, 2123
SmlI	CTYRAG	7 cut(s)	496, 791, 1069, 1807, 1918, 2123, 2410
SmoI	CTYRAG	7 cut(s)	496, 791, 1069, 1807, 1918, 2123, 2410
SseBI	AGGCCT	1 cut(s)	381
SsiI	CCGC	8 cut(s)	291, 592, 1207, 1957, 1959, 2009, 2250, 2548
SspI	AATATT	2 cut(s)	125, 1352
SspMI	CTAG	5 cut(s)	182, 1158, 1529, 2426, 2499
SstI	GAGCTC	1 cut(s)	615
StuI	AGGCCT	1 cut(s)	381
StyD4I	CCNGG	3 cut(s)	270, 594, 1581
StyI	CCWWGG	1 cut(s)	2487
TaaI	ACNGT	9 cut(s)	325, 644, 708, 1237, 1403, 1577, 2197, 2348, 2578
TaiI	ACGT	2 cut(s)	1058, 1980
TatI	WGTACW	1 cut(s)	998
TauI	GCSGC	3 cut(s)	594, 1210, 2551
TfiI	GAWTC	9 cut(s)	654, 1081, 1421, 1662, 1735, 1906, 1971, 2211, 2422
TseFI	GTSAC	3 cut(s)	286, 730, 2062
TseI	GCWGC	7 cut(s)	433, 468, 669, 1747, 1779, 1986, 2048
Tsp45I	GTSAC	3 cut(s)	286, 730, 2062
TspGWI	ACGGA	1 cut(s)	252
VspI	ATTAAT	1 cut(s)	576
XceI	RCATGY	2 cut(s)	455, 1766
XhoI	CTCGAG	3 cut(s)	496, 1918, 2123
XspI	CTAG	5 cut(s)	182, 1158, 1529, 2426, 2499
ZraI	GACGTC	1 cut(s)	1056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.