pycom02g05570

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
3793304 .. 3795575
2272 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g05570.5

Sequence Viewer

Length: 1584 bp
ATGACGTTATCAATTAAATATTGTTTGTATTTCACATGTGAAATCAAATATATCCGAAATGCTTTGACCCGGAAAAATGCTGACCTAAAACACCAAGTTGTAGTTCTCTTGGGATTTGTAGCAGGTTTTGCAGCATTAGTTTTAATATTCCACAGTTTCATACATTTTCAGTATCATATTATTTGGCTCCAAGAGAGAGAGAGAGAGATGAAAATGTCAACTGGGTTCTTCGTCCTCCTCCTTTTGATGCTCTGTGCAAGTTCAGTTCGTGCGCAGCGCCGGATAGACTTCATAAGCATTGATTGTGGTTCTCCCTCGAAGCTCTACGAAGACACGGATACGAACATAACATACTCACCGGATGGAGATTACATAGACACAGGGATAAACCAGAACATCTCTTCTGAATTTATGTATCCAAACAATCCCAACCTCCCTTTCCCTCTCTCAGACCTCAGGAGTTTTCCTCAAGGAAACAAAAATTGCTACGTGTTGAAACCCGAAGCAGGAAATGGCAGTTTGAATTTGATTAGAGCTACCTTCTTGTATGGAAACTACGATGGAGAAAACAAGCTGCCCGAATTCGATCTCTATCTCGGCGTCAACTTTTGGTCGACAGTGAGGTTTGAAAATGCTTCAGATATTGTTACGAAGGAGATTATAGGTTTTGCAGAATCAAATACCGTGGACATTTGTCTAATAAATAAAGGGTTGGGAACTCCTTTCATTTCAGCGTTGGAATTTAGACCGCTTAATAGCTCAACTTATGGTACTGAATTTGGGACTTCTGCATCATTAGTACTCATTGAAAGACTGGACATTGGACAAGGCAATGGAACAGGTCGATATGGAGATGATGTTTATGATCGCATTTGGTCACGTCACATTTCACCTTCTTGGGATCCAATTAGTACTTCTTCGTCGATTACTACCTATGAGAACGGATATAGAGTGCCATTGGAAGTAATCCGGACTGTAGCTACACCTCAGAATGCAAGTGAACCTTTAAATTTGTACTGGAACACAACTGACATGAATGCTCGGTTTTATGTTTTTATGTACTTTGCTGAAGTGGAGAAACTTGAGAAGAATCAGTCAAGAAAATTCAATATATCATGGAATGGATCTCCATTGTTTGGACCATTCACTCCCCGTTACTTACAGGCAGACGTGATATCAAATTCAAGAGCTCTGGTGGGAAAGGATCACGAAATTTCTTTACACAAGACAGAGGACTCTTCCCTTCCGCCGATTCTGAATGCTGTTGAAGTTTTCCAAGTTATGCAGCTGGTTGAATCACCTACTTATGGTGAAGATGCTGATGCCATAACGAACGTCAAAACTACATATCAAATAAAAAAAATCTGGGCTGGTGATCCTTGTGGACCTAGGAATTTCTCTTGGGAAGGACTAGAATGCAACTACAGCGTTTCGATTCCTCGGATTATTTCCCTAAACTTGAGTTCAAGCAATTTGAATGGGATAATAGCTGCTTCCATTGCCAATCTCTCATCACTGGAGTCCTTAGATTTGTCGAACAATAACCTAACCGGGCCAGTGCCTCAGTTCTTGGAAGATCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

528

Amino Acids

59.33

Weight (kDa)

5.09

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 273
Acc36I ACCTGC 1 cut(s) 113
AccB7I CCANNNNNTGG 1 cut(s) 1136
AccI GTMKAC 1 cut(s) 614
AccIII TCCGGA 1 cut(s) 969
AciI CCGC 2 cut(s) 749, 1247
AclWI GGATC 5 cut(s) 896, 909, 1132, 1212, 1370
AcuI CTGAAG 2 cut(s) 621, 1089
AcyI GRCGYC 1 cut(s) 600
AfaI GTAC 5 cut(s) 772, 801, 913, 1016, 1061
AfiI CCNNNNNNNGG 3 cut(s) 506, 1136, 1307
AflIII ACRYGT 2 cut(s) 35, 489
AjiI CACGTC 2 cut(s) 881, 1171
AjuI GAANNNNNNNTTGG 6 cut(s) 87, 119, 422, 454, 898, 930
AluBI AGCT 8 cut(s) 322, 536, 574, 759, 980, 1190, 1288, 1490
AluI AGCT 8 cut(s) 322, 536, 574, 759, 980, 1190, 1288, 1490
Alw21I GWGCWC 1 cut(s) 1192
AlwI GGATC 5 cut(s) 896, 909, 1132, 1212, 1370
Aor13HI TCCGGA 1 cut(s) 969
AoxI GGCC 1 cut(s) 1553
ApeKI GCWGC 5 cut(s) 131, 274, 574, 1285, 1490
AspA2I CCTAGG 1 cut(s) 1388
AspLEI GCGC 2 cut(s) 274, 279
AspS9I GGNCC 3 cut(s) 1139, 1385, 1553
AsuC2I CCSGG 2 cut(s) 70, 1552
AsuHPI GGTGA 5 cut(s) 348, 882, 1290, 1322, 1385
AvaII GGWCC 2 cut(s) 1139, 1385
AvrII CCTAGG 1 cut(s) 1388
AxyI CCTNAGG 1 cut(s) 455
BamHI GGATCC 1 cut(s) 901
BanII GRGCYC 1 cut(s) 1192
BbsI GAAGAC 1 cut(s) 336
Bbv12I GWGCWC 1 cut(s) 1192
BbvI GCAGC 5 cut(s) 143, 286, 561, 1297, 1477
BccI CCATC 2 cut(s) 356, 554
BciVI GTATCC 2 cut(s) 331, 426
BcnI CCSGG 2 cut(s) 70, 1552
BfaI CTAG 2 cut(s) 1389, 1412
BfmI CTRYAG 2 cut(s) 975, 1423
BfoI RGCGCY 1 cut(s) 280
BfuAI ACCTGC 1 cut(s) 113
BfuI GTATCC 2 cut(s) 331, 426
BisI GCNGC 5 cut(s) 132, 275, 575, 1286, 1491
BlnI CCTAGG 1 cut(s) 1388
BlsI GCNGC 5 cut(s) 133, 276, 576, 1287, 1492
BmcAI AGTACT 2 cut(s) 801, 913
Bme1390I CCNGG 2 cut(s) 70, 1552
Bme18I GGWCC 2 cut(s) 1139, 1385
BmgBI CACGTC 2 cut(s) 881, 1171
BmgT120I GGNCC 3 cut(s) 1139, 1385, 1553
BmiI GGNNCC 2 cut(s) 188, 903
BmrFI CCNGG 2 cut(s) 70, 1552
BmrI ACTGGG 1 cut(s) 231
BmsI GCATC 4 cut(s) 237, 800, 1306, 1312
BmuI ACTGGG 1 cut(s) 231
BoxI GACNNNNGTC 1 cut(s) 693
BpiI GAAGAC 1 cut(s) 336
BplI GAGNNNNNCTC 2 cut(s) 451, 483
BpmI CTGGAG 1 cut(s) 1538
BpuEI CTTGAG 3 cut(s) 453, 1103, 1480
BpuMI CCSGG 2 cut(s) 70, 1552
Bsa29I ATCGAT 1 cut(s) 1579
BsaAI YACGTR 1 cut(s) 490
BsaBI GATNNNNATC 1 cut(s) 591
BsaHI GRCGYC 1 cut(s) 600
BsaJI CCNNGG 3 cut(s) 684, 1388, 1439
BsaWI WCCGGW 2 cut(s) 358, 969
BsaXI ACNNNNNCTCC 2 cut(s) 843, 873
Bsc4I CCNNNNNNNGG 3 cut(s) 506, 1136, 1307
Bse1I ACTGG 5 cut(s) 226, 819, 1022, 1521, 1556
Bse21I CCTNAGG 1 cut(s) 455
Bse3DI GCAATG 2 cut(s) 838, 1497
Bse8I GATNNNNATC 1 cut(s) 591
BseAI TCCGGA 1 cut(s) 969
BseCI ATCGAT 1 cut(s) 1579
BseDI CCNNGG 3 cut(s) 684, 1388, 1439
BseGI GGATG 1 cut(s) 367
BseJI GATNNNNATC 1 cut(s) 591
BseLI CCNNNNNNNGG 3 cut(s) 506, 1136, 1307
BseMI GCAATG 2 cut(s) 838, 1497
BseMII CTCAG 4 cut(s) 462, 469, 1001, 1577
BseNI ACTGG 5 cut(s) 226, 819, 1022, 1521, 1556
BseRI GAGGAG 1 cut(s) 227
BseXI GCAGC 5 cut(s) 143, 286, 561, 1297, 1477
BshFI GGCC 1 cut(s) 1555
BshVI ATCGAT 1 cut(s) 1579
BsiHKAI GWGCWC 1 cut(s) 1192
BsiSI CCGG 5 cut(s) 70, 280, 359, 970, 1551
BslFI GGGAC 1 cut(s) 796
BslI CCNNNNNNNGG 3 cut(s) 506, 1136, 1307
BsmFI GGGAC 1 cut(s) 796
BsmI GAATGC 4 cut(s) 997, 1042, 1264, 1421
BsnI GGCC 1 cut(s) 1555
Bsp1286I GDGCHC 1 cut(s) 1192
Bsp13I TCCGGA 1 cut(s) 969
Bsp143I GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
BspACI CCGC 2 cut(s) 749, 1247
BspANI GGCC 1 cut(s) 1555
BspCNI CTCAG 4 cut(s) 461, 468, 1000, 1576
BspDI ATCGAT 1 cut(s) 1579
BspEI TCCGGA 1 cut(s) 969
BspLI GGNNCC 2 cut(s) 188, 903
BspMI ACCTGC 1 cut(s) 113
BspPI GGATC 5 cut(s) 896, 909, 1132, 1212, 1370
BsrDI GCAATG 2 cut(s) 838, 1497
BsrI ACTGG 5 cut(s) 226, 819, 1022, 1521, 1556
BssECI CCNNGG 3 cut(s) 684, 1388, 1439
BssMI GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
BssNI GRCGYC 1 cut(s) 600
BssT1I CCWWGG 1 cut(s) 1388
Bst4CI ACNGT 4 cut(s) 155, 619, 685, 976
Bst6I CTCTTC 2 cut(s) 406, 1243
BstACI GRCGYC 1 cut(s) 600
BstAPI GCANNNNNTGC 1 cut(s) 128
BstBAI YACGTR 1 cut(s) 490
BstDEI CTNAG 5 cut(s) 448, 455, 987, 1525, 1563
BstDSI CCRYGG 1 cut(s) 684
BstF5I GGATG 1 cut(s) 367
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 2 cut(s) 274, 279
BstKTI GATC 7 cut(s) 589, 868, 904, 1127, 1207, 1378, 1579
BstMBI GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
BstMWI GCNNNNNNNGC 3 cut(s) 128, 1425, 1499
BstNSI RCATGY 1 cut(s) 39
BstPAI GACNNNNGTC 1 cut(s) 693
BstSCI CCNGG 2 cut(s) 68, 1550
BstSFI CTRYAG 2 cut(s) 975, 1423
BstV1I GCAGC 5 cut(s) 143, 286, 561, 1297, 1477
BstV2I GAAGAC 1 cut(s) 336
BstX2I RGATCY 2 cut(s) 901, 1124
BstYI RGATCY 2 cut(s) 901, 1124
Bsu15I ATCGAT 1 cut(s) 1579
Bsu36I CCTNAGG 1 cut(s) 455
BsuI GTATCC 2 cut(s) 331, 426
BsuRI GGCC 1 cut(s) 1555
BsuTUI ATCGAT 1 cut(s) 1579
BtgI CCRYGG 1 cut(s) 684
BtrI CACGTC 2 cut(s) 881, 1171
BtsCI GGATG 1 cut(s) 367
BtsIMutI CAGTG 3 cut(s) 624, 1514, 1563
BveI ACCTGC 1 cut(s) 113
CfoI GCGC 2 cut(s) 274, 279
Cfr13I GGNCC 3 cut(s) 1139, 1385, 1553
ClaI ATCGAT 1 cut(s) 1579
CseI GACGC 1 cut(s) 589
Csp6I GTAC 5 cut(s) 771, 800, 912, 1015, 1060
CspCI CAANNNNNGTGG 2 cut(s) 666, 701
CviAII CATG 3 cut(s) 36, 1033, 1116
CviQI GTAC 5 cut(s) 771, 800, 912, 1015, 1060
DdeI CTNAG 5 cut(s) 448, 455, 987, 1525, 1563
DpnI GATC 7 cut(s) 588, 867, 903, 1126, 1206, 1377, 1578
DpnII GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
DraI TTTAAA 1 cut(s) 1008
Eam1104I CTCTTC 2 cut(s) 406, 1243
EarI CTCTTC 2 cut(s) 406, 1243
EciI GGCGGA 1 cut(s) 1236
Ecl136II GAGCTC 1 cut(s) 1190
Eco130I CCWWGG 1 cut(s) 1388
Eco24I GRGCYC 1 cut(s) 1192
Eco32I GATATC 1 cut(s) 1176
Eco47I GGWCC 2 cut(s) 1139, 1385
Eco53kI GAGCTC 1 cut(s) 1190
Eco57I CTGAAG 2 cut(s) 621, 1089
Eco81I CCTNAGG 1 cut(s) 455
EcoICRI GAGCTC 1 cut(s) 1190
EcoRI GAATTC 1 cut(s) 581
EcoRV GATATC 1 cut(s) 1176
EcoT14I CCWWGG 1 cut(s) 1388
EcoT38I GRGCYC 1 cut(s) 1192
ErhI CCWWGG 1 cut(s) 1388
FaeI CATG 3 cut(s) 39, 1036, 1119
FalI AAGNNNNNCTT 2 cut(s) 988, 1020
FaqI GGGAC 1 cut(s) 796
FatI CATG 3 cut(s) 35, 1032, 1115
FblI GTMKAC 1 cut(s) 614
Fnu4HI GCNGC 5 cut(s) 132, 275, 575, 1286, 1491
FokI GGATG 1 cut(s) 374
FriOI GRGCYC 1 cut(s) 1192
Fsp4HI GCNGC 5 cut(s) 132, 275, 575, 1286, 1491
FspBI CTAG 2 cut(s) 1389, 1412
FspI TGCGCA 1 cut(s) 273
GlaI GCGC 2 cut(s) 273, 278
GluI GCNGC 5 cut(s) 132, 275, 575, 1286, 1491
GsuI CTGGAG 1 cut(s) 1538
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 1 cut(s) 1555
HapII CCGG 5 cut(s) 70, 280, 359, 970, 1551
HgaI GACGC 1 cut(s) 589
HhaI GCGC 2 cut(s) 274, 279
Hin1I GRCGYC 1 cut(s) 600
Hin1II CATG 3 cut(s) 39, 1036, 1119
Hin6I GCGC 2 cut(s) 272, 277
HinP1I GCGC 2 cut(s) 272, 277
HincII GTYRAC 3 cut(s) 219, 604, 615
HindII GTYRAC 3 cut(s) 219, 604, 615
HinfI GANTC 7 cut(s) 674, 1090, 1235, 1252, 1295, 1435, 1520
HpaII CCGG 5 cut(s) 70, 280, 359, 970, 1551
HphI GGTGA 5 cut(s) 348, 882, 1290, 1322, 1385
Hpy166II GTNNAC 6 cut(s) 219, 604, 615, 688, 1001, 1385
Hpy188I TCNGA 7 cut(s) 56, 406, 451, 640, 990, 1257, 1443
Hpy188III TCNNGA 5 cut(s) 457, 970, 1098, 1185, 1208
Hpy8I GTNNAC 6 cut(s) 219, 604, 615, 688, 1001, 1385
Hpy99I CGWCG 1 cut(s) 925
HpyAV CCTTC 5 cut(s) 550, 646, 903, 1253, 1400
HpyCH4III ACNGT 4 cut(s) 155, 619, 685, 976
HpyCH4IV ACGT 5 cut(s) 5, 489, 880, 1170, 1335
HpyCH4V TGCA 7 cut(s) 131, 257, 671, 791, 995, 1285, 1419
HpyF10VI GCNNNNNNNGC 3 cut(s) 128, 1425, 1499
HpyF3I CTNAG 5 cut(s) 448, 455, 987, 1525, 1563
HpySE526I ACGT 5 cut(s) 5, 489, 880, 1170, 1335
Hsp92I GRCGYC 1 cut(s) 600
Hsp92II CATG 3 cut(s) 39, 1036, 1119
HspAI GCGC 2 cut(s) 272, 277
Kpn2I TCCGGA 1 cut(s) 969
Kzo9I GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
LmnI GCTCC 1 cut(s) 192
Lsp1109I GCAGC 5 cut(s) 143, 286, 561, 1297, 1477
LweI GCATC 4 cut(s) 237, 800, 1306, 1312
MaeI CTAG 2 cut(s) 1389, 1412
MaeII ACGT 5 cut(s) 5, 489, 880, 1170, 1335
MaeIII GTNAC 4 cut(s) 646, 876, 881, 1154
MalI GATC 7 cut(s) 588, 867, 903, 1126, 1206, 1377, 1578
MboI GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
MboII GAAGA 7 cut(s) 220, 341, 393, 909, 1099, 1230, 1325
MflI RGATCY 2 cut(s) 901, 1124
MhlI GDGCHC 1 cut(s) 1192
MlyI GAGTC 2 cut(s) 1229, 1529
MmeI TCCRAC 1 cut(s) 717
MroI TCCGGA 1 cut(s) 969
MseI TTAA 4 cut(s) 15, 143, 753, 1007
MspA1I CMGCKG 1 cut(s) 1288
MspI CCGG 5 cut(s) 70, 280, 359, 970, 1551
MspR9I CCNGG 2 cut(s) 70, 1552
MteI GCGCNGCGC 1 cut(s) 275
Mva1269I GAATGC 4 cut(s) 997, 1042, 1264, 1421
MwoI GCNNNNNNNGC 3 cut(s) 128, 1425, 1499
NciI CCSGG 2 cut(s) 70, 1552
NdeII GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
NlaIII CATG 3 cut(s) 39, 1036, 1119
NlaIV GGNNCC 2 cut(s) 188, 903
NmeAIII GCCGAG 1 cut(s) 576
NmuCI GTSAC 2 cut(s) 876, 881
NsbI TGCGCA 1 cut(s) 273
NspI RCATGY 1 cut(s) 39
PciI ACATGT 1 cut(s) 35
PctI GAATGC 4 cut(s) 997, 1042, 1264, 1421
PfeI GAWTC 5 cut(s) 674, 1090, 1252, 1295, 1435
PflMI CCANNNNNTGG 1 cut(s) 1136
PkrI GCNGC 5 cut(s) 133, 276, 576, 1287, 1492
PleI GAGTC 2 cut(s) 1229, 1528
PpsI GAGTC 2 cut(s) 1229, 1528
Ppu21I YACGTR 1 cut(s) 490
PscI ACATGT 1 cut(s) 35
PshAI GACNNNNGTC 1 cut(s) 693
Psp124BI GAGCTC 1 cut(s) 1192
PspN4I GGNNCC 2 cut(s) 188, 903
PspPI GGNCC 3 cut(s) 1139, 1385, 1553
PsrI GAACNNNNNNTAC 2 cut(s) 335, 367
PsuI RGATCY 2 cut(s) 901, 1124
PvuII CAGCTG 1 cut(s) 1288
RsaI GTAC 5 cut(s) 772, 801, 913, 1016, 1061
RsaNI GTAC 5 cut(s) 771, 800, 912, 1015, 1060
SacI GAGCTC 1 cut(s) 1192
SalI GTCGAC 1 cut(s) 613
SaqAI TTAA 4 cut(s) 15, 143, 753, 1007
SatI GCNGC 5 cut(s) 132, 275, 575, 1286, 1491
Sau3AI GATC 7 cut(s) 586, 865, 901, 1124, 1204, 1375, 1576
Sau96I GGNCC 3 cut(s) 1139, 1385, 1553
ScaI AGTACT 2 cut(s) 801, 913
SchI GAGTC 2 cut(s) 1229, 1529
ScrFI CCNGG 2 cut(s) 70, 1552
SduI GDGCHC 1 cut(s) 1192
SfaNI GCATC 4 cut(s) 237, 800, 1306, 1312
SfcI CTRYAG 2 cut(s) 975, 1423
SinI GGWCC 2 cut(s) 1139, 1385
SmlI CTYRAG 3 cut(s) 468, 1082, 1459
SmoI CTYRAG 3 cut(s) 468, 1082, 1459
SsiI CCGC 2 cut(s) 749, 1247
SspI AATATT 2 cut(s) 20, 147
SspMI CTAG 2 cut(s) 1389, 1412
SstI GAGCTC 1 cut(s) 1192
StyD4I CCNGG 2 cut(s) 68, 1550
StyI CCWWGG 1 cut(s) 1388
TaaI ACNGT 4 cut(s) 155, 619, 685, 976
TaiI ACGT 5 cut(s) 8, 492, 883, 1173, 1338
TaqI TCGA 8 cut(s) 317, 585, 614, 844, 923, 1433, 1535, 1579
TatI WGTACW 4 cut(s) 799, 911, 1014, 1059
TfiI GAWTC 5 cut(s) 674, 1090, 1252, 1295, 1435
Tru1I TTAA 4 cut(s) 15, 143, 753, 1007
Tru9I TTAA 4 cut(s) 15, 143, 753, 1007
TscAI CASTG 3 cut(s) 624, 1521, 1563
TseFI GTSAC 2 cut(s) 876, 881
TseI GCWGC 5 cut(s) 131, 274, 574, 1285, 1490
Tsp45I GTSAC 2 cut(s) 876, 881
TspDTI ATGAA 5 cut(s) 148, 224, 280, 715, 1049
TspGWI ACGGA 2 cut(s) 350, 957
TspRI CASTG 3 cut(s) 624, 1521, 1563
Van91I CCANNNNNTGG 1 cut(s) 1136
VpaK11BI GGWCC 2 cut(s) 1139, 1385
XceI RCATGY 1 cut(s) 39
XmaJI CCTAGG 1 cut(s) 1388
XmiI GTMKAC 1 cut(s) 614
XspI CTAG 2 cut(s) 1389, 1412
ZrmI AGTACT 2 cut(s) 801, 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.