Rw2G006060

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0005945
Physical Location & Seq
Forward (+)
5754185 .. 5766274
12090 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G006060.1

Sequence Viewer

Length: 2676 bp
ATGAAAATGTCAACTGCTGCCTTCCTCCTCCTGTATCTGATGATCTCTGCAAGTTCAGTTCACGCGCAGCGCCGAATAGCCTTCATAAGCATTGATTGTGGAGCTCCCTCAAAGCTGTATGAAGACCCGGATACCAACATAACTTACTCACCAGATGACAATTTCATAGACACAGGGATAAGCCAGAACATCTCATCCGAATATATGTATCCTAACAATCCAAACTTGCCATTACCTGCCTCGGACCTTAGGAGTTTTCCTCATGGAAACAAAAACTGCTACACTTTAAAACCTGAAGCTGGGAAAGGTAGTTTGAACCTAATCCGAGCTTCTTTCTTGTATGGAAACTACGATGGAAAAGACCAGCTACCGGAGTTTGATCTCTATCTTGATGTCAACTTCTGGTCTGTGGTGACATTTGGAAATGCTTCTGATATTGTCATAAAGGAGATTGTTGGTTTTGCACAATCTGATGTCATAAATGTTTGTCTTCTAAACAAAGGTTTAGGAACTCCTTTCATTTCGGCATTGGAACTTAGACCGCTTAACAGCTCAAATTATGGGACTGCGTTTGGGACTAATGCATCATTAGTACTCTTTCAAAGACTAGACATTGGATCAAGCAATGGAACAGGTAGGTATGCAGAAGATGTTTATGACCGCGTTTGGTCTAATTACATCTCTCCTTATTGGGATTCAGTGAGCACTTCTTCACCAATTACTACTGATGGAGATGGATATAGAGTACCTTATGAAGTAATCAAGACTGCAGCCAGGCCTCGGAATGGAAGTGAACCTCTGGAGCTGTATTGGAACACAACTGACTCGAATGCTCAGTTTTATGTTTTTATGTACTTTTCTGAAGTGGAGCATCTTGAGAAAAACCAGTCAAGAAAGTTGAACATATCTTGGAATGGTGCTCCATTGTTTGAACAATTTGTGCCTCGTTACTTATATGCAGACATTTTATCTAATTCAAAATCTTTGGTGGGAAAAGAGCACCAGATTTCTATATCTAAAGCAGAAAACTCGACCCTTCCACCGATTCTCAATGCAGTTGAGATTTACCAAGTCATGCAGCTGGTTGAATCACCAACTTCTAGTGAAGATGTTGATGCTATTATGAATGTCAAAACCACATATCAAATTAAAAAAACCTGGGCTGGTGATCCCTGTGCACCTAAGAATTTCTCTTGGGAAGGTCTTAAATGCAACTACACCATTTCAGTTCCTCGGATTATTTCCCTGAACTTGACCTCAAGCAATTTGAGTGGGATTATAGTTGCTTCCATTTCCAAGCTTTCATCACTGGAGTCCTTGGACTTGTCAAACAATAACTTAACCGGACCAGTGCCTGCATTTCTGGAAGAACTGAAATCTCTCAAGACCCTGAATTTGAAAGGGAATCAATTGTCTGGTTTTGTTCCAAATGCACTTAAGAAAAGATCAGATGCTGGATTACTTGTACTAAGTGTGGATAGTCAAAATGTTTGTGGCTCAAATTCATGCAAAAAAAAGAAGAAAATTGTTGCTCCGATAGTTGGATCATTATTATCAGCACTAGTAGTCCTTATAGTTCTCATACTTGTCTGGAAGCTGAGAACAAAAAAGAACTCAGAAGGAGTAGAAACCTTTAAGAAAGAAGGAATTCCTATTGCATCAAAGAAGTGCCAGTTTAGTTATGATGAGGTTATAGAAATCACCAAAAATTTCAACACTGAAATCGGAAAAGGAGGATTCGGGGCTGTGTACCATGGCTACTTGAAAGATGGCACCCAAGTTGCAGTCAAAATGCTTTCTCCATCATCAACTCAAGGACCGAGGGAGTTCCAAACTGAGGCTGAGCTCCTGATGAGAATCCATCACAGAAATTTGGCATCATTTATTGGATACTGTGATGATGCTGATAACCTGGCTCTTATATATGAGTACATGGCTAATGGGAACCTTAAAGATTATCTCTCAGTTAAAAGCTCAGGTATGACTTGGGAATTGAGACTTCACATCGCCATAGATGCTGCACAAGGGCTAGAGTACTTACACCATGGATGCAAGCCACCTATTGTACACAGAGATGTGAAGACTGCCAACATTCTCTTAAGTGAAAACCTGGAAGCTAAGATAGCAGATTTTGGTCTTTCTAAGGTTTTTTCCAATGATAATGAAACCGACGTGGAAACCACAGTTATGGGCACAGCAGGTTATTTAGACCCAGAGTACTACAGTTCTCAGAAGTTGAATGAAAAAAGCGACGTGTATAGTTTCGGGGTAGTACTATTGGAACTGATCACAGGCCAACCTGCAGTCATAAGAAGCGATGAACGAATCCACATTGTGCAGTGGGTGAGTCCTGAACTCCAGAAAGGGGATATAGCAAGTGTTGTTGATAAAAGAATGGAAGGAGATTTCGATGTGAATTCAGTTTGGAAAGCTTTCGAAATAGCAATGACATGCACAACTAGAACCTCTCAACAAAGAGCCACCATGGGTTTTGTGTTATCAGAGCTAAAACAGTGTTTGGAAATGGAGTTGTCGAGGAATCGAGAAAGAAATTCTGGATTGACTGAAGAAAGTAGAGACAGATTTGCAGCAGCATATAGTAGTTCACCATATAATAGTTCCATGTATACAGATTCTACAAATGCTGATTCCATGACTGGGCCATTTGCTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

891

Amino Acids

98.85

Weight (kDa)

5.49

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 31 - 358 4.1e-107 Malectin-like domain
LRR_8 PF13855 415 - 471 2.6e-09 Leucine rich repeat
LRR_4 PF12799 436 - 472 7.7e-06 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 571 - 835 2.2e-51 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 572 - 829 1.3e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 244, 2189, 2308
AccB1I GGYRCC 1 cut(s) 1772
AccI GTMKAC 1 cut(s) 2627
AccII CGCG 2 cut(s) 65, 663
AciI CCGC 2 cut(s) 542, 661
AclWI GGATC 3 cut(s) 625, 1163, 1552
AcsI RAATTY 8 cut(s) 1186, 1393, 1501, 1647, 1708, 1870, 2416, 2551
AcuI CTGAAG 3 cut(s) 315, 882, 2586
AdeI CACNNNGTG 1 cut(s) 2335
AfiI CCNNNNNNNGG 8 cut(s) 299, 370, 780, 785, 1541, 1837, 2365, 2658
AflII CTTAAG 2 cut(s) 1436, 2098
AflIII ACRYGT 1 cut(s) 2253
AhlI ACTAGT 1 cut(s) 1561
AjiI CACGTC 2 cut(s) 2173, 2254
AjnI CCWGG 4 cut(s) 773, 1157, 1911, 2109
AloI GAACNNNNNNTCC 2 cut(s) 179, 211
Alw21I GWGCWC 6 cut(s) 106, 707, 922, 1002, 1180, 1848
Alw26I GTCTC 2 cut(s) 1990, 2571
Alw44I GTGCAC 1 cut(s) 1176
AlwI GGATC 3 cut(s) 625, 1163, 1552
AlwNI CAGNNNCTG 2 cut(s) 1355, 1454
AoxI GGCC 3 cut(s) 776, 2293, 2660
ApaLI GTGCAC 1 cut(s) 1176
ApeKI GCWGC 7 cut(s) 17, 67, 770, 1078, 2018, 2588, 2591
ApoI RAATTY 8 cut(s) 1186, 1393, 1501, 1647, 1708, 1870, 2416, 2551
ArsI GACNNNNNNTTYG 2 cut(s) 1378, 1410
Asp700I GAANNNNTTC 3 cut(s) 427, 1647, 2432
AspLEI GCGC 2 cut(s) 67, 72
AspS9I GGNCC 4 cut(s) 244, 1346, 1817, 2660
AsuC2I CCSGG 1 cut(s) 128
AsuHPI GGTGA 8 cut(s) 141, 424, 705, 1083, 1178, 1693, 2356, 2598
AsuII TTCGAA 1 cut(s) 2436
AvaII GGWCC 3 cut(s) 244, 1346, 1817
AxyI CCTNAGG 1 cut(s) 248
BaeGI GKGCMC 2 cut(s) 1180, 2195
BanI GGYRCC 1 cut(s) 1772
BanII GRGCYC 2 cut(s) 106, 1848
BbsI GAAGAC 3 cut(s) 129, 482, 2087
Bbv12I GWGCWC 6 cut(s) 106, 707, 922, 1002, 1180, 1848
BbvI GCAGC 7 cut(s) 4, 79, 782, 1090, 2005, 2600, 2603
BccI CCATC 6 cut(s) 347, 722, 728, 1763, 1810, 1869
BcgI CGANNNNNNTGC 2 cut(s) 1011, 1045
BciT130I CCWGG 4 cut(s) 775, 1159, 1913, 2111
BciVI GTATCC 3 cut(s) 124, 219, 1883
BclI TGATCA 1 cut(s) 2286
BcnI CCSGG 1 cut(s) 128
BcoDI GTCTC 2 cut(s) 1990, 2571
BcuI ACTAGT 1 cut(s) 1561
BfaI CTAG 6 cut(s) 608, 1101, 1562, 2030, 2460, 2670
BfmI CTRYAG 3 cut(s) 768, 2221, 2301
BfoI RGCGCY 1 cut(s) 73
BfrI CTTAAG 2 cut(s) 1436, 2098
BfuAI ACCTGC 3 cut(s) 244, 2189, 2308
BfuI GTATCC 3 cut(s) 124, 219, 1883
BisI GCNGC 7 cut(s) 18, 68, 771, 1079, 2019, 2589, 2592
BlpI GCTNAGC 1 cut(s) 1842
BlsI GCNGC 7 cut(s) 19, 69, 772, 1080, 2020, 2590, 2593
BmcAI AGTACT 4 cut(s) 594, 2036, 2219, 2274
Bme1390I CCNGG 5 cut(s) 128, 775, 1159, 1913, 2111
Bme18I GGWCC 3 cut(s) 244, 1346, 1817
BmgBI CACGTC 2 cut(s) 2173, 2254
BmgT120I GGNCC 4 cut(s) 244, 1346, 1817, 2660
BmiI GGNNCC 2 cut(s) 1774, 1946
BmrFI CCNGG 5 cut(s) 128, 775, 1159, 1913, 2111
BmrI ACTGGG 1 cut(s) 2667
BmsI GCATC 9 cut(s) 593, 880, 1105, 1441, 1667, 1886, 1891, 2005, 2039
BmuI ACTGGG 1 cut(s) 2667
BpiI GAAGAC 3 cut(s) 129, 482, 2087
BplI GAGNNNNNCTC 2 cut(s) 244, 276
BpmI CTGGAG 3 cut(s) 821, 1331, 2342
Bpu10I CCTNAGC 1 cut(s) 1975
Bpu1102I GCTNAGC 1 cut(s) 1842
Bpu14I TTCGAA 1 cut(s) 2436
BpuEI CTTGAG 4 cut(s) 896, 1243, 1367, 1797
BpuMI CCSGG 1 cut(s) 128
BsaBI GATNNNNATC 2 cut(s) 384, 1856
BsaJI CCNNGG 9 cut(s) 240, 779, 1158, 1232, 1317, 1753, 1820, 2044, 2484
BsaWI WCCGGW 2 cut(s) 370, 1343
Bsc4I CCNNNNNNNGG 8 cut(s) 299, 370, 780, 785, 1541, 1837, 2365, 2658
Bse1I ACTGG 5 cut(s) 886, 1314, 1349, 1672, 2662
Bse21I CCTNAGG 1 cut(s) 248
Bse3DI GCAATG 2 cut(s) 631, 2451
Bse8I GATNNNNATC 2 cut(s) 384, 1856
BseBI CCWGG 4 cut(s) 775, 1159, 1913, 2111
BseDI CCNNGG 9 cut(s) 240, 779, 1158, 1232, 1317, 1753, 1820, 2044, 2484
BseGI GGATG 2 cut(s) 194, 2054
BseJI GATNNNNATC 2 cut(s) 384, 1856
BseLI CCNNNNNNNGG 8 cut(s) 299, 370, 780, 785, 1541, 1837, 2365, 2658
BseMI GCAATG 2 cut(s) 631, 2451
BseMII CTCAG 8 cut(s) 848, 1589, 1629, 1827, 1833, 1977, 1989, 2243
BseNI ACTGG 5 cut(s) 886, 1314, 1349, 1672, 2662
BseRI GAGGAG 1 cut(s) 17
BseSI GKGCMC 2 cut(s) 1180, 2195
BseXI GCAGC 7 cut(s) 4, 79, 782, 1090, 2005, 2600, 2603
BseYI CCCAGC 1 cut(s) 299
BsgI GTGCAG 2 cut(s) 2004, 2357
Bsh1236I CGCG 2 cut(s) 65, 663
BshFI GGCC 3 cut(s) 778, 2295, 2662
BshNI GGYRCC 1 cut(s) 1772
BsiHKAI GWGCWC 6 cut(s) 106, 707, 922, 1002, 1180, 1848
BsiSI CCGG 3 cut(s) 128, 371, 1344
BslFI GGGAC 2 cut(s) 577, 589
BslI CCNNNNNNNGG 8 cut(s) 299, 370, 780, 785, 1541, 1837, 2365, 2658
BsmAI GTCTC 2 cut(s) 1990, 2571
BsmFI GGGAC 2 cut(s) 577, 589
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 3 cut(s) 778, 2295, 2662
Bsp119I TTCGAA 1 cut(s) 2436
Bsp1286I GDGCHC 7 cut(s) 106, 707, 922, 1002, 1180, 1848, 2195
Bsp1407I TGTACA 1 cut(s) 2065
Bsp143I GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
Bsp1720I GCTNAGC 1 cut(s) 1842
Bsp19I CCATGG 3 cut(s) 1753, 2044, 2484
BspACI CCGC 2 cut(s) 542, 661
BspANI GGCC 3 cut(s) 778, 2295, 2662
BspCNI CTCAG 8 cut(s) 847, 1590, 1628, 1828, 1834, 1976, 1988, 2242
BspFNI CGCG 2 cut(s) 65, 663
BspLI GGNNCC 2 cut(s) 1774, 1946
BspMAI CTGCAG 2 cut(s) 772, 2305
BspMI ACCTGC 3 cut(s) 244, 2189, 2308
BspPI GGATC 3 cut(s) 625, 1163, 1552
BspT104I TTCGAA 1 cut(s) 2436
BspT107I GGYRCC 1 cut(s) 1772
BspTI CTTAAG 2 cut(s) 1436, 2098
BsrDI GCAATG 2 cut(s) 631, 2451
BsrGI TGTACA 1 cut(s) 2065
BsrI ACTGG 5 cut(s) 886, 1314, 1349, 1672, 2662
BssECI CCNNGG 9 cut(s) 240, 779, 1158, 1232, 1317, 1753, 1820, 2044, 2484
BssMI GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
BssNAI GTATAC 1 cut(s) 2628
BssT1I CCWWGG 4 cut(s) 1317, 1753, 2044, 2484
Bst1107I GTATAC 1 cut(s) 2628
Bst2UI CCWGG 4 cut(s) 775, 1159, 1913, 2111
Bst4CI ACNGT 4 cut(s) 1895, 2185, 2225, 2514
BstAFI CTTAAG 2 cut(s) 1436, 2098
BstAUI TGTACA 1 cut(s) 2065
BstBI TTCGAA 1 cut(s) 2436
BstC8I GCNNGC 2 cut(s) 1356, 2054
BstDSI CCRYGG 3 cut(s) 1753, 2044, 2484
BstF5I GGATG 2 cut(s) 194, 2054
BstFNI CGCG 2 cut(s) 65, 663
BstH2I RGCGCY 1 cut(s) 73
BstHHI GCGC 2 cut(s) 67, 72
BstKTI GATC 7 cut(s) 45, 382, 620, 1171, 1448, 1547, 2289
BstMAI GTCTC 2 cut(s) 1990, 2571
BstMBI GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
BstMWI GCNNNNNNNGC 2 cut(s) 2015, 2123
BstNI CCWGG 4 cut(s) 775, 1159, 1913, 2111
BstNSI RCATGY 1 cut(s) 2454
BstSCI CCNGG 5 cut(s) 126, 773, 1157, 1911, 2109
BstSFI CTRYAG 3 cut(s) 768, 2221, 2301
BstSLI GKGCMC 2 cut(s) 1180, 2195
BstUI CGCG 2 cut(s) 65, 663
BstV1I GCAGC 7 cut(s) 4, 79, 782, 1090, 2005, 2600, 2603
BstV2I GAAGAC 3 cut(s) 129, 482, 2087
BstXI CCANNNNNNTGG 1 cut(s) 2188
BstZ17I GTATAC 1 cut(s) 2628
Bsu36I CCTNAGG 1 cut(s) 248
BsuI GTATCC 3 cut(s) 124, 219, 1883
BsuRI GGCC 3 cut(s) 778, 2295, 2662
BtgI CCRYGG 3 cut(s) 1753, 2044, 2484
BtgZI GCGATG 2 cut(s) 1990, 2331
BtrI CACGTC 2 cut(s) 2173, 2254
BtsCI GGATG 2 cut(s) 194, 2054
BtsI GCAGTG 1 cut(s) 2345
BtsIMutI CAGTG 6 cut(s) 705, 1307, 1356, 1716, 2345, 2519
BveI ACCTGC 3 cut(s) 244, 2189, 2308
Cac8I GCNNGC 2 cut(s) 1356, 2054
CaiI CAGNNNCTG 2 cut(s) 1355, 1454
CfoI GCGC 2 cut(s) 67, 72
Cfr13I GGNCC 4 cut(s) 244, 1346, 1817, 2660
CspCI CAANNNNNGTGG 2 cut(s) 1252, 1287
DpnI GATC 7 cut(s) 44, 381, 619, 1170, 1447, 1546, 2288
DpnII GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
DraI TTTAAA 1 cut(s) 288
DraIII CACNNNGTG 1 cut(s) 2335
Ecl136II GAGCTC 2 cut(s) 104, 1846
Eco130I CCWWGG 4 cut(s) 1317, 1753, 2044, 2484
Eco147I AGGCCT 1 cut(s) 778
Eco24I GRGCYC 2 cut(s) 106, 1848
Eco47I GGWCC 3 cut(s) 244, 1346, 1817
Eco53kI GAGCTC 2 cut(s) 104, 1846
Eco57I CTGAAG 3 cut(s) 315, 882, 2586
Eco81I CCTNAGG 1 cut(s) 248
EcoICRI GAGCTC 2 cut(s) 104, 1846
EcoRI GAATTC 2 cut(s) 1647, 2416
EcoRII CCWGG 4 cut(s) 773, 1157, 1911, 2109
EcoT14I CCWWGG 4 cut(s) 1317, 1753, 2044, 2484
EcoT22I ATGCAT 1 cut(s) 586
EcoT38I GRGCYC 2 cut(s) 106, 1848
ErhI CCWWGG 4 cut(s) 1317, 1753, 2044, 2484
FaqI GGGAC 2 cut(s) 577, 589
FbaI TGATCA 1 cut(s) 2286
FblI GTMKAC 1 cut(s) 2627
Fnu4HI GCNGC 7 cut(s) 18, 68, 771, 1079, 2019, 2589, 2592
FokI GGATG 2 cut(s) 181, 2061
FriOI GRGCYC 2 cut(s) 106, 1848
Fsp4HI GCNGC 7 cut(s) 18, 68, 771, 1079, 2019, 2589, 2592
FspBI CTAG 6 cut(s) 608, 1101, 1562, 2030, 2460, 2670
GlaI GCGC 2 cut(s) 66, 71
GluI GCNGC 7 cut(s) 18, 68, 771, 1079, 2019, 2589, 2592
GsaI CCCAGC 1 cut(s) 303
GsuI CTGGAG 3 cut(s) 821, 1331, 2342
HaeII RGCGCY 1 cut(s) 73
HaeIII GGCC 3 cut(s) 778, 2295, 2662
HapII CCGG 3 cut(s) 128, 371, 1344
HhaI GCGC 2 cut(s) 67, 72
Hin6I GCGC 2 cut(s) 65, 70
HinP1I GCGC 2 cut(s) 65, 70
HincII GTYRAC 2 cut(s) 12, 397
HindII GTYRAC 2 cut(s) 12, 397
HindIII AAGCTT 2 cut(s) 1298, 2430
HpaII CCGG 3 cut(s) 128, 371, 1344
HphI GGTGA 8 cut(s) 141, 424, 705, 1083, 1178, 1693, 2356, 2598
Hpy166II GTNNAC 9 cut(s) 12, 61, 397, 794, 1178, 1750, 2068, 2606, 2628
Hpy8I GTNNAC 9 cut(s) 12, 61, 397, 794, 1178, 1750, 2068, 2606, 2628
Hpy99I CGWCG 2 cut(s) 2174, 2255
HpyAV CCTTC 7 cut(s) 31, 91, 1046, 1193, 1613, 1637, 2393
HpyCH4III ACNGT 4 cut(s) 1895, 2185, 2225, 2514
HpyCH4IV ACGT 2 cut(s) 2172, 2253
HpyF10VI GCNNNNNNNGC 2 cut(s) 2015, 2123
HpySE526I ACGT 2 cut(s) 2172, 2253
HspAI GCGC 2 cut(s) 65, 70
Ksp22I TGATCA 1 cut(s) 2286
Kzo9I GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
LmnI GCTCC 7 cut(s) 101, 109, 802, 868, 925, 1537, 1851
Lsp1109I GCAGC 7 cut(s) 4, 79, 782, 1090, 2005, 2600, 2603
LweI GCATC 9 cut(s) 593, 880, 1105, 1441, 1667, 1886, 1891, 2005, 2039
MaeI CTAG 6 cut(s) 608, 1101, 1562, 2030, 2460, 2670
MaeII ACGT 2 cut(s) 2172, 2253
MaeIII GTNAC 2 cut(s) 412, 947
MalI GATC 7 cut(s) 44, 381, 619, 1170, 1447, 1546, 2288
MboI GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
MboII GAAGA 9 cut(s) 134, 482, 659, 702, 1118, 1379, 1531, 2092, 2579
MfeI CAATTG 1 cut(s) 1409
MhlI GDGCHC 7 cut(s) 106, 707, 922, 1002, 1180, 1848, 2195
MlyI GAGTC 3 cut(s) 818, 1322, 2356
MmeI TCCRAC 1 cut(s) 1522
Mph1103I ATGCAT 1 cut(s) 586
MroXI GAANNNNTTC 3 cut(s) 427, 1647, 2432
MslI CAYNNNNRTG 2 cut(s) 2073, 2186
MspA1I CMGCKG 1 cut(s) 1081
MspCI CTTAAG 2 cut(s) 1436, 2098
MspI CCGG 3 cut(s) 128, 371, 1344
MspR9I CCNGG 5 cut(s) 128, 775, 1159, 1913, 2111
MteI GCGCNGCGC 1 cut(s) 68
MunI CAATTG 1 cut(s) 1409
Mva1269I GAATGC 1 cut(s) 835
MvaI CCWGG 4 cut(s) 775, 1159, 1913, 2111
MvnI CGCG 2 cut(s) 65, 663
MwoI GCNNNNNNNGC 2 cut(s) 2015, 2123
NciI CCSGG 1 cut(s) 128
NcoI CCATGG 3 cut(s) 1753, 2044, 2484
NdeII GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
NlaIV GGNNCC 2 cut(s) 1774, 1946
NmuCI GTSAC 1 cut(s) 412
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 1 cut(s) 2454
NspV TTCGAA 1 cut(s) 2436
PceI AGGCCT 1 cut(s) 778
PctI GAATGC 1 cut(s) 835
PdmI GAANNNNTTC 3 cut(s) 427, 1647, 2432
PkrI GCNGC 7 cut(s) 19, 69, 772, 1080, 2020, 2590, 2593
PleI GAGTC 3 cut(s) 818, 1321, 2355
PpsI GAGTC 3 cut(s) 818, 1321, 2355
Psp124BI GAGCTC 2 cut(s) 106, 1848
Psp6I CCWGG 4 cut(s) 773, 1157, 1911, 2109
PspFI CCCAGC 1 cut(s) 299
PspGI CCWGG 4 cut(s) 773, 1157, 1911, 2109
PspN4I GGNNCC 2 cut(s) 1774, 1946
PspPI GGNCC 4 cut(s) 244, 1346, 1817, 2660
PstI CTGCAG 2 cut(s) 772, 2305
PstNI CAGNNNCTG 2 cut(s) 1355, 1454
PvuII CAGCTG 1 cut(s) 1081
RseI CAYNNNNRTG 2 cut(s) 2073, 2186
SacI GAGCTC 2 cut(s) 106, 1848
SatI GCNGC 7 cut(s) 18, 68, 771, 1079, 2019, 2589, 2592
Sau3AI GATC 7 cut(s) 42, 379, 617, 1168, 1445, 1544, 2286
Sau96I GGNCC 4 cut(s) 244, 1346, 1817, 2660
ScaI AGTACT 4 cut(s) 594, 2036, 2219, 2274
SchI GAGTC 3 cut(s) 818, 1322, 2356
ScrFI CCNGG 5 cut(s) 128, 775, 1159, 1913, 2111
SduI GDGCHC 7 cut(s) 106, 707, 922, 1002, 1180, 1848, 2195
SfaNI GCATC 9 cut(s) 593, 880, 1105, 1441, 1667, 1886, 1891, 2005, 2039
SfcI CTRYAG 3 cut(s) 768, 2221, 2301
SfuI TTCGAA 1 cut(s) 2436
SinI GGWCC 3 cut(s) 244, 1346, 1817
SmiMI CAYNNNNRTG 2 cut(s) 2073, 2186
SmlI CTYRAG 6 cut(s) 875, 1258, 1382, 1436, 1812, 2098
SmoI CTYRAG 6 cut(s) 875, 1258, 1382, 1436, 1812, 2098
SpeI ACTAGT 1 cut(s) 1561
SseBI AGGCCT 1 cut(s) 778
SsiI CCGC 2 cut(s) 542, 661
SspMI CTAG 6 cut(s) 608, 1101, 1562, 2030, 2460, 2670
SstI GAGCTC 2 cut(s) 106, 1848
StuI AGGCCT 1 cut(s) 778
StyD4I CCNGG 5 cut(s) 126, 773, 1157, 1911, 2109
StyI CCWWGG 4 cut(s) 1317, 1753, 2044, 2484
TaaI ACNGT 4 cut(s) 1895, 2185, 2225, 2514
TaiI ACGT 2 cut(s) 2175, 2256
TaqI TCGA 6 cut(s) 827, 1031, 2409, 2436, 2534, 2542
TaqII GACCGA 1 cut(s) 1834
TatI WGTACW 8 cut(s) 592, 852, 1465, 1929, 2034, 2065, 2217, 2272
TscAI CASTG 6 cut(s) 705, 1314, 1356, 1723, 2345, 2519
TseFI GTSAC 1 cut(s) 412
TseI GCWGC 7 cut(s) 17, 67, 770, 1078, 2018, 2588, 2591
Tsp45I GTSAC 1 cut(s) 412
TspRI CASTG 6 cut(s) 705, 1314, 1356, 1723, 2345, 2519
Vha464I CTTAAG 2 cut(s) 1436, 2098
VneI GTGCAC 1 cut(s) 1176
VpaK11BI GGWCC 3 cut(s) 244, 1346, 1817
XapI RAATTY 8 cut(s) 1186, 1393, 1501, 1647, 1708, 1870, 2416, 2551
XceI RCATGY 1 cut(s) 2454
XmiI GTMKAC 1 cut(s) 2627
XmnI GAANNNNTTC 3 cut(s) 427, 1647, 2432
XspI CTAG 6 cut(s) 608, 1101, 1562, 2030, 2460, 2670
ZrmI AGTACT 4 cut(s) 594, 2036, 2219, 2274
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.