Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0005112

Physical Location & Seq

Genomic Coordinates Forward (+)

19153897 .. 19158799

Gene Structure 4903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGACCAAACTACCCTTAAACCCGAAACTGTTAACTAAAGTCCCACGAAAGGCACAAACTATAAACCGCCGCGACCTCTCAGTGTATCAGTTGAAGTGGAAGGAAGAGCGAGCAACCCCTCTCTCTCTGAATCTCTGCAAATCCGGAATGGCGAAAGGTGACGATGCAGTGAGGAAGAAGCAGAACAAGGTCAAAAGAAAGAAACTCCACAACAAGAACGACCGTTCTTCCTCTGCAATCTCTGCCCGCGTTGCCTCCATTATTGCTGCCAAGAAGCGCCGCCATTCCGGTAAACGCCGCAAATGTCAGGGTATGTGCTTTAGCCTTCCCACCCTTGATGATCCCTTCAACGATAGGAATGGTGCAAAGGATTTTGAGAAGAAAGTAACCAAGAAATCCATGCTTCCCCATAAGCGTGAGAAGGCGTTTTTGAATGAAAAAAGTGAAGAAACTCTCGATATTGAAATGGTGGATAGTCCAGCGCAGAAGAAGGAGATGGTAACAATTTTGAAGGATGAGGTAAAGAAATCACTGACGTCTATTAATACCACGGCTGATAGAAGCCGAATGGACCCTGGAGAGACAAAGACTCAGCTGGATGGGAATGGGAGCATCTACAGGCATCAGGAAAAGGTCTGTGAAAACTTAGATTGTCCATCTAAGTATCTTATTCAGTGCTTGAATGCAATAGAAAATTCACTTCGCTGTGATGGTACCTACAACAACGAGGAGGGCAAGCCCTTGTTTGTGAGTACTTGGGGAGTTGAGTTTTGGAAGTGTTATTCAGCTGGGAAGGATATACTCGAGACAAGCGGAACCTCTTCTACAATGGAGCAAATTGCATGGATGGTTTCCTGCGCTGCTGATTCAGTTTCTAGAAAGGATGAAGAAGGTTTATCAGTCACCAGCCCATATCTTTTGTTCCTTGTTCCATCCCAGGAGAAAGCCACAAAGGTACGTTTAGTATGCAAACCTTTGAAGGCTCTTGGAATACATACAGTGAGTATACATCCTGGTGCTTCCTTAGATTACCAGATTGAAGGTCTGAAAAGCTCAGAACCTGAGATTATGATTTCAACACCTGAGAGACTTTTGGAGCTTCTTTCCTTGAATGCCATTGATCTATCTGGGGTTTCATTGCTGGTCGTTGATGGACTGGAATCTTTCTATAGCGAAGGTTGCTTTGATAAAATAAATTCCATTCGCCAATCTTTTAGTGGAAAAACCCATACAGTTGTTTTCAACGATTGCCTTAGATATGCCTGCGTACGAGTGGTGCAAAATCTTCTGACAGGATCAGTTCATAAATTATCTCTAAACAGTTCTCTCACCAGTCAAAGTGCATGCATCATTCAGTCTGTAAACATGTGTCTTTTGAAAGAAAAACTGCCTAAGGCTATCGGAATTCTTGATCATGCTTATCGTGGTCGGCACCAACCTCAGGCTTCAAAGGTGCTGTATATAGTAGGGAAAGATGAAAAGCATCGTAAACTAGCTACTGCGCTAAAGTTCAAGGGTTATTCCATCTCATCTGACTCGGTTCTTTCAGAAGTTGGGAACAGTGTGGAATCCAAGGGCAGGACGAGGCCTACAGTCTCCATGATTCACATAGACCAAATTGATGCAACCGACTTCAGTGAATATGAATTTGTAGTTCTACCCGATTTGATTCTCTCAATTGACAGTTACGTTCAGATCCTCATGAAAATGGCTCGGTACTCTGTCAATGGCATATTGCATAGCTTTTTTTCCAGAGAAGACGCAAAGCTCGCTGCACCGTTAATTAAGATCCTTGAACAATGTGGGCAGGCAGTGCCTGAAGCCCTAAGAAAAATGTCTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD

Protein Analysis

615

Amino Acids

68.57

Weight (kDa)

9.23

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	302 - 406	4.3e-07	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28600
fragaria_vesca	FvH4_7g06330
malus_domestica	MD02G1244900.v1.1 MD07G1072000.v1.1
prunus_persica	Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1 Prupe.2G090100_v2.0.a1
pyrus_communis	pycom02g21080 pycom07g05500
rosa_chinensis	RchiOBHm_Chr1g0334181
rosa_laevigata	RLG00000029468 RLG00000029472 RLG00000029474
rosa_multiflora	Rmu_sc0003496.1_g000001 Rmu_sc0008928.1_g000002 Rmu_sc0032811.1_g000001
rosa_roxburghii	Rroxscaffold_4G00316940 Rroxscaffold_4G00316960 Rroxscaffold_4G00316970
rosa_rugosa	Rorug01G0113200
rosa_samantha	Rh1AG137100 Rh1AG137300 Rh1BG104600 Rh1CG129300 Rh1CG129500 Rh1DG142300
rosa_wichuraiana	Rw0G018010 Rw1G011410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	539
Acc65I	GGTACC	1 cut(s)	713
AccB1I	GGYRCC	2 cut(s)	713, 1431
AccI	GTMKAC	1 cut(s)	1006
AccII	CGCG	2 cut(s)	72, 249
AccIII	TCCGGA	1 cut(s)	143
AciI	CCGC	6 cut(s)	67, 70, 247, 280, 298, 813
AclWI	GGATC	4 cut(s)	335, 1303, 1690, 1783
AcsI	RAATTY	4 cut(s)	694, 1195, 1404, 1646
AcuI	CTGAAG	2 cut(s)	1618, 1839
AcyI	GRCGYC	1 cut(s)	536
AfaI	GTAC	5 cut(s)	715, 754, 957, 1269, 1718
AfiI	CCNNNNNNNGG	3 cut(s)	49, 1441, 1578
AflIII	ACRYGT	1 cut(s)	1365
AjnI	CCWGG	3 cut(s)	574, 936, 1012
AluBI	AGCT	7 cut(s)	595, 788, 1053, 1099, 1496, 1743, 1768
AluI	AGCT	7 cut(s)	595, 788, 1053, 1099, 1496, 1743, 1768
Alw26I	GTCTC	4 cut(s)	575, 800, 1081, 1600
AlwI	GGATC	4 cut(s)	335, 1303, 1690, 1783
AlwNI	CAGNNNCTG	2 cut(s)	1061, 1817
Ama87I	CYCGRG	1 cut(s)	803
Aor13HI	TCCGGA	1 cut(s)	143
AoxI	GGCC	1 cut(s)	1586
ApeKI	GCWGC	3 cut(s)	266, 860, 1772
ApoI	RAATTY	4 cut(s)	694, 1195, 1404, 1646
AseI	ATTAAT	1 cut(s)	543
Asp700I	GAANNNNTTC	1 cut(s)	820
Asp718I	GGTACC	1 cut(s)	713
AspLEI	GCGC	4 cut(s)	279, 484, 860, 1504
AspS9I	GGNCC	1 cut(s)	571
AsuHPI	GGTGA	3 cut(s)	170, 895, 1321
AvaI	CYCGRG	1 cut(s)	803
AvaII	GGWCC	1 cut(s)	571
AxyI	CCTNAGG	2 cut(s)	1392, 1440
BanI	GGYRCC	2 cut(s)	713, 1431
BbsI	GAAGAC	2 cut(s)	1764, 1830
BbvI	GCAGC	3 cut(s)	253, 847, 1759
BccI	CCATC	8 cut(s)	490, 593, 664, 704, 841, 940, 1145, 1532
BceAI	ACGGC	1 cut(s)	567
BciT130I	CCWGG	3 cut(s)	576, 938, 1014
BclI	TGATCA	1 cut(s)	1411
BcoDI	GTCTC	4 cut(s)	575, 800, 1081, 1600
BfaI	CTAG	2 cut(s)	876, 1493
BfmI	CTRYAG	3 cut(s)	616, 1168, 1590
BfoI	RGCGCY	1 cut(s)	280
BisI	GCNGC	6 cut(s)	70, 267, 280, 298, 861, 1773
BlsI	GCNGC	6 cut(s)	71, 268, 281, 299, 862, 1774
BmcAI	AGTACT	1 cut(s)	754
Bme1390I	CCNGG	3 cut(s)	576, 938, 1014
Bme18I	GGWCC	1 cut(s)	571
BmeT110I	CYCGRG	1 cut(s)	803
BmgT120I	GGNCC	1 cut(s)	571
BmiI	GGNNCC	4 cut(s)	573, 715, 817, 1433
BmrFI	CCNGG	3 cut(s)	576, 938, 1014
BmsI	GCATC	6 cut(s)	154, 621, 631, 1356, 1492, 1612
BpiI	GAAGAC	2 cut(s)	1764, 1830
BpmI	CTGGAG	1 cut(s)	597
BsaHI	GRCGYC	1 cut(s)	536
BsaJI	CCNNGG	4 cut(s)	549, 574, 936, 1572
BsaWI	WCCGGW	2 cut(s)	143, 287
Bsc4I	CCNNNNNNNGG	3 cut(s)	49, 1441, 1578
Bse1I	ACTGG	2 cut(s)	1161, 1332
Bse21I	CCTNAGG	2 cut(s)	1392, 1440
Bse3DI	GCAATG	1 cut(s)	1136
BseAI	TCCGGA	1 cut(s)	143
BseBI	CCWGG	3 cut(s)	576, 938, 1014
BseDI	CCNNGG	4 cut(s)	549, 574, 936, 1572
BseGI	GGATG	6 cut(s)	520, 604, 852, 889, 932, 1009
BseLI	CCNNNNNNNGG	3 cut(s)	49, 1441, 1578
BseMI	GCAATG	1 cut(s)	1136
BseMII	CTCAG	6 cut(s)	93, 605, 1053, 1068, 1074, 1454
BseNI	ACTGG	2 cut(s)	1161, 1332
BseRI	GAGGAG	1 cut(s)	743
BseXI	GCAGC	3 cut(s)	253, 847, 1759
BseYI	CCCAGC	1 cut(s)	788
BsgI	GTGCAG	1 cut(s)	1758
Bsh1236I	CGCG	2 cut(s)	72, 249
Bsh1285I	CGRYCG	1 cut(s)	223
BshFI	GGCC	1 cut(s)	1588
BshNI	GGYRCC	2 cut(s)	713, 1431
BsiEI	CGRYCG	1 cut(s)	223
BsiHKCI	CYCGRG	1 cut(s)	803
BsiSI	CCGG	2 cut(s)	144, 288
BsiWI	CGTACG	1 cut(s)	1267
BslFI	GGGAC	1 cut(s)	26
BslI	CCNNNNNNNGG	3 cut(s)	49, 1441, 1578
BsmAI	GTCTC	4 cut(s)	575, 800, 1081, 1600
BsmFI	GGGAC	1 cut(s)	26
BsmI	GAATGC	2 cut(s)	688, 1117
BsnI	GGCC	1 cut(s)	1588
BsoBI	CYCGRG	1 cut(s)	803
Bsp13I	TCCGGA	1 cut(s)	143
Bsp143I	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
BspACI	CCGC	6 cut(s)	67, 70, 247, 280, 298, 813
BspANI	GGCC	1 cut(s)	1588
BspCNI	CTCAG	6 cut(s)	92, 604, 1054, 1067, 1075, 1453
BspEI	TCCGGA	1 cut(s)	143
BspFNI	CGCG	2 cut(s)	72, 249
BspHI	TCATGA	1 cut(s)	1701
BspLI	GGNNCC	4 cut(s)	573, 715, 817, 1433
BspPI	GGATC	4 cut(s)	335, 1303, 1690, 1783
BspQI	GCTCTTC	1 cut(s)	99
BspT107I	GGYRCC	2 cut(s)	713, 1431
BsrDI	GCAATG	1 cut(s)	1136
BsrI	ACTGG	2 cut(s)	1161, 1332
BssECI	CCNNGG	4 cut(s)	549, 574, 936, 1572
BssMI	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
BssNAI	GTATAC	1 cut(s)	1007
BssNI	GRCGYC	1 cut(s)	536
BssT1I	CCWWGG	1 cut(s)	1572
Bst1107I	GTATAC	1 cut(s)	1007
Bst2UI	CCWGG	3 cut(s)	576, 938, 1014
Bst4CI	ACNGT	9 cut(s)	30, 224, 1000, 1234, 1322, 1562, 1594, 1685, 1779
Bst6I	CTCTTC	2 cut(s)	99, 826
BstACI	GRCGYC	1 cut(s)	536
BstAPI	GCANNNNNTGC	2 cut(s)	242, 1813
BstC8I	GCNNGC	7 cut(s)	111, 247, 737, 1264, 1345, 1770, 1809
BstDSI	CCRYGG	1 cut(s)	549
BstF5I	GGATG	6 cut(s)	520, 604, 852, 889, 932, 1009
BstFNI	CGCG	2 cut(s)	72, 249
BstH2I	RGCGCY	1 cut(s)	280
BstHHI	GCGC	4 cut(s)	279, 484, 860, 1504
BstKTI	GATC	6 cut(s)	343, 1123, 1298, 1414, 1698, 1791
BstMAI	GTCTC	4 cut(s)	575, 800, 1081, 1600
BstMBI	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
BstMCI	CGRYCG	1 cut(s)	223
BstMWI	GCNNNNNNNGC	5 cut(s)	242, 251, 1179, 1769, 1813
BstNI	CCWGG	3 cut(s)	576, 938, 1014
BstNSI	RCATGY	2 cut(s)	1347, 1369
BstSCI	CCNGG	3 cut(s)	574, 936, 1012
BstSFI	CTRYAG	3 cut(s)	616, 1168, 1590
BstUI	CGCG	2 cut(s)	72, 249
BstV1I	GCAGC	3 cut(s)	253, 847, 1759
BstV2I	GAAGAC	2 cut(s)	1764, 1830
BstX2I	RGATCY	2 cut(s)	1695, 1788
BstYI	RGATCY	2 cut(s)	1695, 1788
BstZ17I	GTATAC	1 cut(s)	1007
Bsu36I	CCTNAGG	2 cut(s)	1392, 1440
BsuRI	GGCC	1 cut(s)	1588
BtgI	CCRYGG	1 cut(s)	549
BtsCI	GGATG	6 cut(s)	520, 604, 852, 889, 932, 1009
BtsI	GCAGTG	2 cut(s)	174, 1818
BtsIMutI	CAGTG	8 cut(s)	87, 174, 530, 680, 1005, 1567, 1642, 1818
Cac8I	GCNNGC	7 cut(s)	111, 247, 737, 1264, 1345, 1770, 1809
CaiI	CAGNNNCTG	2 cut(s)	1061, 1817
CciI	TCATGA	1 cut(s)	1701
CfoI	GCGC	4 cut(s)	279, 484, 860, 1504
Cfr13I	GGNCC	1 cut(s)	571
CseI	GACGC	1 cut(s)	1769
Csp6I	GTAC	5 cut(s)	714, 753, 956, 1268, 1717
CviAII	CATG	7 cut(s)	400, 843, 1344, 1366, 1415, 1600, 1702
CviQI	GTAC	5 cut(s)	714, 753, 956, 1268, 1717
DpnI	GATC	6 cut(s)	342, 1122, 1297, 1413, 1697, 1790
DpnII	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
Eam1104I	CTCTTC	2 cut(s)	99, 826
EarI	CTCTTC	2 cut(s)	99, 826
Eco130I	CCWWGG	1 cut(s)	1572
Eco147I	AGGCCT	1 cut(s)	1588
Eco47I	GGWCC	1 cut(s)	571
Eco57I	CTGAAG	2 cut(s)	1618, 1839
Eco81I	CCTNAGG	2 cut(s)	1392, 1440
Eco88I	CYCGRG	1 cut(s)	803
EcoRI	GAATTC	1 cut(s)	1404
EcoRII	CCWGG	3 cut(s)	574, 936, 1012
EcoT14I	CCWWGG	1 cut(s)	1572
EcoT22I	ATGCAT	1 cut(s)	1349
ErhI	CCWWGG	1 cut(s)	1572
FaeI	CATG	7 cut(s)	403, 846, 1347, 1369, 1418, 1603, 1705
FaqI	GGGAC	1 cut(s)	26
FatI	CATG	7 cut(s)	399, 842, 1343, 1365, 1414, 1599, 1701
FauI	CCCGC	1 cut(s)	254
FbaI	TGATCA	1 cut(s)	1411
FblI	GTMKAC	1 cut(s)	1006
Fnu4HI	GCNGC	6 cut(s)	70, 267, 280, 298, 861, 1773
FokI	GGATG	6 cut(s)	527, 611, 859, 896, 919, 996
Fsp4HI	GCNGC	6 cut(s)	70, 267, 280, 298, 861, 1773
FspBI	CTAG	2 cut(s)	876, 1493
GlaI	GCGC	4 cut(s)	278, 483, 859, 1503
GluI	GCNGC	6 cut(s)	70, 267, 280, 298, 861, 1773
GsaI	CCCAGC	1 cut(s)	792
GsuI	CTGGAG	1 cut(s)	597
HaeII	RGCGCY	1 cut(s)	280
HaeIII	GGCC	1 cut(s)	1588
HapII	CCGG	2 cut(s)	144, 288
HgaI	GACGC	1 cut(s)	1769
HhaI	GCGC	4 cut(s)	279, 484, 860, 1504
Hin1I	GRCGYC	1 cut(s)	536
Hin1II	CATG	7 cut(s)	403, 846, 1347, 1369, 1418, 1603, 1705
Hin6I	GCGC	4 cut(s)	277, 482, 858, 1502
HinP1I	GCGC	4 cut(s)	277, 482, 858, 1502
HincII	GTYRAC	1 cut(s)	33
HindII	GTYRAC	1 cut(s)	33
HinfI	GANTC	8 cut(s)	130, 589, 866, 1160, 1535, 1568, 1603, 1669
HpaI	GTTAAC	1 cut(s)	33
HpaII	CCGG	2 cut(s)	144, 288
HphI	GGTGA	3 cut(s)	170, 895, 1321
Hpy166II	GTNNAC	5 cut(s)	33, 293, 1007, 1363, 1490
Hpy188I	TCNGA	8 cut(s)	129, 1047, 1057, 1290, 1403, 1534, 1549, 1695
Hpy188III	TCNNGA	8 cut(s)	144, 455, 626, 805, 876, 1409, 1702, 1752
Hpy8I	GTNNAC	5 cut(s)	33, 293, 1007, 1363, 1490
HpyCH4III	ACNGT	9 cut(s)	30, 224, 1000, 1234, 1322, 1562, 1594, 1685, 1779
HpyCH4IV	ACGT	3 cut(s)	536, 958, 1689
HpyF10VI	GCNNNNNNNGC	5 cut(s)	242, 251, 1179, 1769, 1813
HpySE526I	ACGT	3 cut(s)	536, 958, 1689
Hsp92I	GRCGYC	1 cut(s)	536
Hsp92II	CATG	7 cut(s)	403, 846, 1347, 1369, 1418, 1603, 1705
HspAI	GCGC	4 cut(s)	277, 482, 858, 1502
Kpn2I	TCCGGA	1 cut(s)	143
KpnI	GGTACC	1 cut(s)	717
Ksp22I	TGATCA	1 cut(s)	1411
KspAI	GTTAAC	1 cut(s)	33
Kzo9I	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
LguI	GCTCTTC	1 cut(s)	99
LmnI	GCTCC	3 cut(s)	609, 832, 1096
Lsp1109I	GCAGC	3 cut(s)	253, 847, 1759
LweI	GCATC	6 cut(s)	154, 621, 631, 1356, 1492, 1612
MaeI	CTAG	2 cut(s)	876, 1493
MaeII	ACGT	3 cut(s)	536, 958, 1689
MaeIII	GTNAC	5 cut(s)	158, 385, 499, 901, 1685
MalI	GATC	6 cut(s)	342, 1122, 1297, 1413, 1697, 1790
MboI	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
MfeI	CAATTG	1 cut(s)	1677
MflI	RGATCY	2 cut(s)	1695, 1788
MlyI	GAGTC	2 cut(s)	583, 1529
Mph1103I	ATGCAT	1 cut(s)	1349
MroI	TCCGGA	1 cut(s)	143
MroXI	GAANNNNTTC	1 cut(s)	820
MseI	TTAA	5 cut(s)	17, 32, 543, 1781, 1785
MslI	CAYNNNNRTG	3 cut(s)	414, 1014, 1706
MspA1I	CMGCKG	2 cut(s)	595, 788
MspI	CCGG	2 cut(s)	144, 288
MspR9I	CCNGG	3 cut(s)	576, 938, 1014
MunI	CAATTG	1 cut(s)	1677
Mva1269I	GAATGC	2 cut(s)	688, 1117
MvaI	CCWGG	3 cut(s)	576, 938, 1014
MvnI	CGCG	2 cut(s)	72, 249
MwoI	GCNNNNNNNGC	5 cut(s)	242, 251, 1179, 1769, 1813
NdeII	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
NlaIII	CATG	7 cut(s)	403, 846, 1347, 1369, 1418, 1603, 1705
NlaIV	GGNNCC	4 cut(s)	573, 715, 817, 1433
NmuCI	GTSAC	2 cut(s)	158, 901
NsiI	ATGCAT	1 cut(s)	1349
NspI	RCATGY	2 cut(s)	1347, 1369
PacI	TTAATTAA	1 cut(s)	1785
PaeI	GCATGC	1 cut(s)	1347
PaeR7I	CTCGAG	1 cut(s)	803
PagI	TCATGA	1 cut(s)	1701
PceI	AGGCCT	1 cut(s)	1588
PciI	ACATGT	1 cut(s)	1365
PciSI	GCTCTTC	1 cut(s)	99
PctI	GAATGC	2 cut(s)	688, 1117
PdmI	GAANNNNTTC	1 cut(s)	820
PfeI	GAWTC	6 cut(s)	130, 866, 1160, 1568, 1603, 1669
Pfl23II	CGTACG	1 cut(s)	1267
PkrI	GCNGC	6 cut(s)	71, 268, 281, 299, 862, 1774
PleI	GAGTC	2 cut(s)	583, 1529
PpsI	GAGTC	2 cut(s)	583, 1529
PscI	ACATGT	1 cut(s)	1365
PshBI	ATTAAT	1 cut(s)	543
Psp6I	CCWGG	3 cut(s)	574, 936, 1012
PspFI	CCCAGC	1 cut(s)	788
PspGI	CCWGG	3 cut(s)	574, 936, 1012
PspLI	CGTACG	1 cut(s)	1267
PspN4I	GGNNCC	4 cut(s)	573, 715, 817, 1433
PspPI	GGNCC	1 cut(s)	571
PsrI	GAACNNNNNNTAC	2 cut(s)	808, 840
PstNI	CAGNNNCTG	2 cut(s)	1061, 1817
PsuI	RGATCY	2 cut(s)	1695, 1788
PvuII	CAGCTG	2 cut(s)	595, 788
RsaI	GTAC	5 cut(s)	715, 754, 957, 1269, 1718
RsaNI	GTAC	5 cut(s)	714, 753, 956, 1268, 1717
RseI	CAYNNNNRTG	3 cut(s)	414, 1014, 1706
SapI	GCTCTTC	1 cut(s)	99
SaqAI	TTAA	5 cut(s)	17, 32, 543, 1781, 1785
SatI	GCNGC	6 cut(s)	70, 267, 280, 298, 861, 1773
Sau3AI	GATC	6 cut(s)	340, 1120, 1295, 1411, 1695, 1788
Sau96I	GGNCC	1 cut(s)	571
ScaI	AGTACT	1 cut(s)	754
SchI	GAGTC	2 cut(s)	583, 1529
ScrFI	CCNGG	3 cut(s)	576, 938, 1014
SfaNI	GCATC	6 cut(s)	154, 621, 631, 1356, 1492, 1612
SfcI	CTRYAG	3 cut(s)	616, 1168, 1590
Sfr274I	CTCGAG	1 cut(s)	803
SinI	GGWCC	1 cut(s)	571
SlaI	CTCGAG	1 cut(s)	803
SmiMI	CAYNNNNRTG	3 cut(s)	414, 1014, 1706
SmlI	CTYRAG	1 cut(s)	803
SmoI	CTYRAG	1 cut(s)	803
SphI	GCATGC	1 cut(s)	1347
SseBI	AGGCCT	1 cut(s)	1588
SsiI	CCGC	6 cut(s)	67, 70, 247, 280, 298, 813
SspMI	CTAG	2 cut(s)	876, 1493
StuI	AGGCCT	1 cut(s)	1588
StyD4I	CCNGG	3 cut(s)	574, 936, 1012
StyI	CCWWGG	1 cut(s)	1572
TaaI	ACNGT	9 cut(s)	30, 224, 1000, 1234, 1322, 1562, 1594, 1685, 1779
TaiI	ACGT	3 cut(s)	539, 961, 1692
TaqI	TCGA	2 cut(s)	456, 804
TatI	WGTACW	1 cut(s)	752
TauI	GCSGC	3 cut(s)	72, 282, 300
TfiI	GAWTC	6 cut(s)	130, 866, 1160, 1568, 1603, 1669
Tru1I	TTAA	5 cut(s)	17, 32, 543, 1781, 1785
Tru9I	TTAA	5 cut(s)	17, 32, 543, 1781, 1785
TscAI	CASTG	8 cut(s)	87, 174, 537, 680, 1005, 1567, 1642, 1818
TseFI	GTSAC	2 cut(s)	158, 901
TseI	GCWGC	3 cut(s)	266, 860, 1772
Tsp45I	GTSAC	2 cut(s)	158, 901
TspDTI	ATGAA	8 cut(s)	450, 900, 1125, 1292, 1491, 1659, 1718, 1830
TspRI	CASTG	8 cut(s)	87, 174, 537, 680, 1005, 1567, 1642, 1818
VpaK11BI	GGWCC	1 cut(s)	571
VspI	ATTAAT	1 cut(s)	543
XapI	RAATTY	4 cut(s)	694, 1195, 1404, 1646
XbaI	TCTAGA	1 cut(s)	875
XceI	RCATGY	2 cut(s)	1347, 1369
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1214
XhoI	CTCGAG	1 cut(s)	803
XmiI	GTMKAC	1 cut(s)	1006
XmnI	GAANNNNTTC	1 cut(s)	820
XspI	CTAG	2 cut(s)	876, 1493
ZraI	GACGTC	1 cut(s)	537
ZrmI	AGTACT	1 cut(s)	754
Zsp2I	ATGCAT	1 cut(s)	1349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.