30S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49400 AT3G18880 AT3G18880 |
| fragaria_vesca | FvH4_5g34540 |
| malus_domestica | MD03G1139600.v1.1 MD11G1162200.v1.1 |
| prunus_persica | Prupe.1G001800_v2.0.a1 Prupe.1G001800_v2.0.a1 Prupe.1G001800_v2.0.a1 Prupe.6G124600_v2.0.a1 Prupe.6G124600_v2.0.a1 |
| pyrus_communis | pycom03g09460 pycom11g13180 |
| rosa_chinensis | RchiOBHm_Chr7g0235191 |
| rosa_laevigata | RLG00000001174 |
| rosa_multiflora | Rmu_co8093390.1_g000001 Rmu_sc0004657.1_g000023 |
| rosa_roxburghii | Rroxscaffold_3G00226190 |
| rosa_rugosa | Rorug07G0289000 |
| rosa_samantha | Rh7AG443500 Rh7BG416200 Rh7CG464700 Rh7DG433000 |
| rosa_wichuraiana | Rw7G036870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 185 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AflII | CTTAAG | 1 cut(s) | 224 |
| AgsI | TTSAA | 2 cut(s) | 209, 268 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 56, 88 |
| AluBI | AGCT | 2 cut(s) | 85, 205 |
| AluI | AGCT | 2 cut(s) | 85, 205 |
| Alw21I | GWGCWC | 1 cut(s) | 138 |
| AoxI | GGCC | 1 cut(s) | 123 |
| AspS9I | GGNCC | 2 cut(s) | 108, 124 |
| AsuHPI | GGTGA | 1 cut(s) | 188 |
| AvaII | GGWCC | 1 cut(s) | 108 |
| Bbv12I | GWGCWC | 1 cut(s) | 138 |
| BccI | CCATC | 3 cut(s) | 13, 84, 195 |
| BfrI | CTTAAG | 1 cut(s) | 224 |
| Bme18I | GGWCC | 1 cut(s) | 108 |
| BmgT120I | GGNCC | 2 cut(s) | 108, 124 |
| BmsI | GCATC | 2 cut(s) | 27, 176 |
| BsaAI | YACGTR | 1 cut(s) | 100 |
| BseGI | GGATG | 1 cut(s) | 24 |
| Bsh1285I | CGRYCG | 1 cut(s) | 160 |
| BshFI | GGCC | 1 cut(s) | 125 |
| BsiEI | CGRYCG | 1 cut(s) | 160 |
| BsiHKAI | GWGCWC | 1 cut(s) | 138 |
| BsnI | GGCC | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 138 |
| BspANI | GGCC | 1 cut(s) | 125 |
| BspTI | CTTAAG | 1 cut(s) | 224 |
| Bst4CI | ACNGT | 1 cut(s) | 10 |
| Bst6I | CTCTTC | 1 cut(s) | 98 |
| BstAFI | CTTAAG | 1 cut(s) | 224 |
| BstBAI | YACGTR | 1 cut(s) | 100 |
| BstF5I | GGATG | 1 cut(s) | 24 |
| BstMCI | CGRYCG | 1 cut(s) | 160 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 153 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 121 |
| BsuRI | GGCC | 1 cut(s) | 125 |
| BtsCI | GGATG | 1 cut(s) | 24 |
| BtsI | GCAGTG | 2 cut(s) | 66, 142 |
| BtsIMutI | CAGTG | 3 cut(s) | 54, 66, 142 |
| Cfr13I | GGNCC | 2 cut(s) | 108, 124 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviAII | CATG | 2 cut(s) | 121, 128 |
| CviJI | RGCY | 5 cut(s) | 70, 85, 125, 177, 205 |
| CviKI_1 | RGCY | 5 cut(s) | 70, 85, 125, 177, 205 |
| CviQI | GTAC | 1 cut(s) | 184 |
| Eam1104I | CTCTTC | 1 cut(s) | 98 |
| EarI | CTCTTC | 1 cut(s) | 98 |
| Eco47I | GGWCC | 1 cut(s) | 108 |
| Eco57I | CTGAAG | 1 cut(s) | 185 |
| EcoO109I | RGGNCCY | 1 cut(s) | 108 |
| FaeI | CATG | 2 cut(s) | 124, 131 |
| FaiI | YATR | 3 cut(s) | 122, 129, 254 |
| FatI | CATG | 2 cut(s) | 120, 127 |
| FokI | GGATG | 1 cut(s) | 31 |
| HaeIII | GGCC | 1 cut(s) | 125 |
| Hin1II | CATG | 2 cut(s) | 124, 131 |
| HinfI | GANTC | 1 cut(s) | 193 |
| HphI | GGTGA | 1 cut(s) | 188 |
| Hpy166II | GTNNAC | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 1 cut(s) | 192 |
| Hpy8I | GTNNAC | 1 cut(s) | 64 |
| HpyAV | CCTTC | 1 cut(s) | 209 |
| HpyCH4III | ACNGT | 1 cut(s) | 10 |
| HpyCH4IV | ACGT | 1 cut(s) | 99 |
| HpyCH4V | TGCA | 2 cut(s) | 40, 147 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 153 |
| HpySE526I | ACGT | 1 cut(s) | 99 |
| Hsp92II | CATG | 2 cut(s) | 124, 131 |
| LpnPI | CCDG | 3 cut(s) | 52, 187, 194 |
| LweI | GCATC | 2 cut(s) | 27, 176 |
| MaeII | ACGT | 1 cut(s) | 99 |
| MboII | GAAGA | 2 cut(s) | 115, 256 |
| MhlI | GDGCHC | 1 cut(s) | 138 |
| MluCI | AATT | 2 cut(s) | 209, 219 |
| MmeI | TCCRAC | 1 cut(s) | 266 |
| MnlI | CCTC | 3 cut(s) | 99, 121, 188 |
| MseI | TTAA | 1 cut(s) | 225 |
| MspCI | CTTAAG | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 153 |
| NlaIII | CATG | 2 cut(s) | 124, 131 |
| PfeI | GAWTC | 1 cut(s) | 193 |
| Ppu21I | YACGTR | 1 cut(s) | 100 |
| PpuMI | RGGWCCY | 1 cut(s) | 108 |
| Psp5II | RGGWCCY | 1 cut(s) | 108 |
| PspPI | GGNCC | 2 cut(s) | 108, 124 |
| PspPPI | RGGWCCY | 1 cut(s) | 108 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| Sau96I | GGNCC | 2 cut(s) | 108, 124 |
| SduI | GDGCHC | 1 cut(s) | 138 |
| SetI | ASST | 6 cut(s) | 87, 102, 113, 201, 207, 231 |
| SfaNI | GCATC | 2 cut(s) | 27, 176 |
| SinI | GGWCC | 1 cut(s) | 108 |
| SmlI | CTYRAG | 1 cut(s) | 224 |
| SmoI | CTYRAG | 1 cut(s) | 224 |
| Sse9I | AATT | 2 cut(s) | 209, 219 |
| TaaI | ACNGT | 1 cut(s) | 10 |
| TaiI | ACGT | 1 cut(s) | 102 |
| TaqII | GACCGA | 1 cut(s) | 174 |
| TasI | AATT | 2 cut(s) | 209, 219 |
| TfiI | GAWTC | 1 cut(s) | 193 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TscAI | CASTG | 3 cut(s) | 54, 66, 149 |
| TspDTI | ATGAA | 3 cut(s) | 17, 109, 226 |
| TspRI | CASTG | 3 cut(s) | 54, 66, 149 |
| Vha464I | CTTAAG | 1 cut(s) | 224 |
| VpaK11BI | GGWCC | 1 cut(s) | 108 |