30S ribosomal protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49400 AT3G18880 AT3G18880 |
| fragaria_vesca | FvH4_5g34540 |
| malus_domestica | MD03G1139600.v1.1 MD11G1162200.v1.1 |
| prunus_persica | Prupe.1G001800_v2.0.a1 Prupe.1G001800_v2.0.a1 Prupe.1G001800_v2.0.a1 Prupe.6G124600_v2.0.a1 Prupe.6G124600_v2.0.a1 |
| pyrus_communis | pycom03g09460 pycom11g13180 |
| rosa_chinensis | RchiOBHm_Chr7g0235191 |
| rosa_laevigata | RLG00000001174 |
| rosa_multiflora | Rmu_co8093390.1_g000001 Rmu_sc0004657.1_g000023 |
| rosa_roxburghii | Rroxscaffold_3G00226190 |
| rosa_rugosa | Rorug07G0289000 |
| rosa_samantha | Rh7AG443500 Rh7BG416200 Rh7CG464700 Rh7DG433000 |
| rosa_wichuraiana | Rw7G036870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 171, 184 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 56, 88 |
| AluBI | AGCT | 1 cut(s) | 85 |
| AluI | AGCT | 1 cut(s) | 85 |
| AlwI | GGATC | 2 cut(s) | 171, 184 |
| AoxI | GGCC | 2 cut(s) | 123, 186 |
| AspLEI | GCGC | 1 cut(s) | 202 |
| AspS9I | GGNCC | 2 cut(s) | 108, 124 |
| AsuHPI | GGTGA | 1 cut(s) | 167 |
| AvaII | GGWCC | 1 cut(s) | 108 |
| BamHI | GGATCC | 1 cut(s) | 176 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| BccI | CCATC | 3 cut(s) | 13, 84, 188 |
| Bme18I | GGWCC | 1 cut(s) | 108 |
| BmgT120I | GGNCC | 2 cut(s) | 108, 124 |
| BmiI | GGNNCC | 1 cut(s) | 178 |
| BmsI | GCATC | 1 cut(s) | 27 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| BsaAI | YACGTR | 1 cut(s) | 100 |
| Bse3DI | GCAATG | 1 cut(s) | 142 |
| BseGI | GGATG | 1 cut(s) | 24 |
| BseMI | GCAATG | 1 cut(s) | 142 |
| BseMII | CTCAG | 1 cut(s) | 183 |
| BshFI | GGCC | 2 cut(s) | 125, 188 |
| BsnI | GGCC | 2 cut(s) | 125, 188 |
| Bsp143I | GATC | 1 cut(s) | 176 |
| BspANI | GGCC | 2 cut(s) | 125, 188 |
| BspCNI | CTCAG | 1 cut(s) | 184 |
| BspLI | GGNNCC | 1 cut(s) | 178 |
| BspPI | GGATC | 2 cut(s) | 171, 184 |
| BsrDI | GCAATG | 1 cut(s) | 142 |
| BssMI | GATC | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 1 cut(s) | 10 |
| Bst6I | CTCTTC | 1 cut(s) | 98 |
| BstBAI | YACGTR | 1 cut(s) | 100 |
| BstC8I | GCNNGC | 2 cut(s) | 198, 204 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstEII | GGTNACC | 1 cut(s) | 155 |
| BstF5I | GGATG | 1 cut(s) | 24 |
| BstHHI | GCGC | 1 cut(s) | 202 |
| BstKTI | GATC | 1 cut(s) | 179 |
| BstMBI | GATC | 1 cut(s) | 176 |
| BstPI | GGTNACC | 1 cut(s) | 155 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BstX2I | RGATCY | 1 cut(s) | 176 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 176 |
| BsuRI | GGCC | 2 cut(s) | 125, 188 |
| BtsCI | GGATG | 1 cut(s) | 24 |
| BtsI | GCAGTG | 1 cut(s) | 66 |
| BtsIMutI | CAGTG | 1 cut(s) | 66 |
| Cac8I | GCNNGC | 2 cut(s) | 198, 204 |
| CfoI | GCGC | 1 cut(s) | 202 |
| Cfr13I | GGNCC | 2 cut(s) | 108, 124 |
| CviAII | CATG | 2 cut(s) | 121, 128 |
| CviJI | RGCY | 5 cut(s) | 70, 85, 125, 188, 219 |
| CviKI_1 | RGCY | 5 cut(s) | 70, 85, 125, 188, 219 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| DpnI | GATC | 1 cut(s) | 178 |
| DpnII | GATC | 1 cut(s) | 176 |
| Eam1104I | CTCTTC | 1 cut(s) | 98 |
| EarI | CTCTTC | 1 cut(s) | 98 |
| Eco147I | AGGCCT | 1 cut(s) | 188 |
| Eco47I | GGWCC | 1 cut(s) | 108 |
| Eco91I | GGTNACC | 1 cut(s) | 155 |
| EcoO109I | RGGNCCY | 1 cut(s) | 108 |
| EcoO65I | GGTNACC | 1 cut(s) | 155 |
| FaeI | CATG | 2 cut(s) | 124, 131 |
| FaiI | YATR | 3 cut(s) | 122, 129, 166 |
| FatI | CATG | 2 cut(s) | 120, 127 |
| FokI | GGATG | 1 cut(s) | 31 |
| GlaI | GCGC | 1 cut(s) | 201 |
| HaeIII | GGCC | 2 cut(s) | 125, 188 |
| HhaI | GCGC | 1 cut(s) | 202 |
| Hin1II | CATG | 2 cut(s) | 124, 131 |
| Hin6I | GCGC | 1 cut(s) | 200 |
| HinP1I | GCGC | 1 cut(s) | 200 |
| HinfI | GANTC | 1 cut(s) | 139 |
| HphI | GGTGA | 1 cut(s) | 167 |
| Hpy166II | GTNNAC | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 1 cut(s) | 193 |
| Hpy8I | GTNNAC | 1 cut(s) | 64 |
| HpyCH4III | ACNGT | 1 cut(s) | 10 |
| HpyCH4IV | ACGT | 1 cut(s) | 99 |
| HpyCH4V | TGCA | 2 cut(s) | 40, 147 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| HpySE526I | ACGT | 1 cut(s) | 99 |
| Hsp92II | CATG | 2 cut(s) | 124, 131 |
| HspAI | GCGC | 1 cut(s) | 200 |
| Kzo9I | GATC | 1 cut(s) | 176 |
| LpnPI | CCDG | 1 cut(s) | 52 |
| LweI | GCATC | 1 cut(s) | 27 |
| MaeII | ACGT | 1 cut(s) | 99 |
| MaeIII | GTNAC | 1 cut(s) | 155 |
| MalI | GATC | 1 cut(s) | 178 |
| MboI | GATC | 1 cut(s) | 176 |
| MboII | GAAGA | 2 cut(s) | 16, 115 |
| MflI | RGATCY | 1 cut(s) | 176 |
| MnlI | CCTC | 4 cut(s) | 99, 121, 178, 199 |
| NdeII | GATC | 1 cut(s) | 176 |
| NlaIII | CATG | 2 cut(s) | 124, 131 |
| NlaIV | GGNNCC | 1 cut(s) | 178 |
| NmuCI | GTSAC | 1 cut(s) | 155 |
| PceI | AGGCCT | 1 cut(s) | 188 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| Ppu21I | YACGTR | 1 cut(s) | 100 |
| PpuMI | RGGWCCY | 1 cut(s) | 108 |
| Psp5II | RGGWCCY | 1 cut(s) | 108 |
| PspEI | GGTNACC | 1 cut(s) | 155 |
| PspN4I | GGNNCC | 1 cut(s) | 178 |
| PspPI | GGNCC | 2 cut(s) | 108, 124 |
| PspPPI | RGGWCCY | 1 cut(s) | 108 |
| PsuI | RGATCY | 1 cut(s) | 176 |
| Sau3AI | GATC | 1 cut(s) | 176 |
| Sau96I | GGNCC | 2 cut(s) | 108, 124 |
| SetI | ASST | 3 cut(s) | 87, 102, 113 |
| SfaNI | GCATC | 1 cut(s) | 27 |
| SinI | GGWCC | 1 cut(s) | 108 |
| SseBI | AGGCCT | 1 cut(s) | 188 |
| StuI | AGGCCT | 1 cut(s) | 188 |
| TaaI | ACNGT | 1 cut(s) | 10 |
| TaiI | ACGT | 1 cut(s) | 102 |
| TaqI | TCGA | 2 cut(s) | 170, 183 |
| TaqII | GACCGA | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| TscAI | CASTG | 1 cut(s) | 66 |
| TseFI | GTSAC | 1 cut(s) | 155 |
| Tsp45I | GTSAC | 1 cut(s) | 155 |
| TspDTI | ATGAA | 2 cut(s) | 17, 109 |
| TspRI | CASTG | 1 cut(s) | 66 |
| VpaK11BI | GGWCC | 1 cut(s) | 108 |