pycom03g12880

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0002653
Physical Location & Seq
Reverse (-)
13704522 .. 13708391
3870 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2058 bp
ATGGGTTCCTATGAACTTACAAATGTACTCTTTTCGAAGATCAAAACCTTAGACCCAGAAAATGCCATCAAAATCATGGGTTATCTTCTCATTCAAGATCTTGCCGAGAAGGATTTGATTCGTTTGGCGTATGGTCCCGAGAGCCTTTTGCACTCGCTGATTCTGAGGGCTAAAATCCAGTTGGGACTTTCTTCAAACACTTCGTCCGCATCTTCCACTCCTTCCTCTCCTTCACCCCTAAATCCCATAGCCAGACCAACCAACGCCAACCCATTTTCTCAGTCCTCTCCTAGAACCCCAAACGGCTTTGACTTTGGGAACAACTCTTCTTCTCCCTCTTCGAATTCCTGGCCGCTTTCTGGCTTTCCAAACAACTCCATTAACCCAAAGGCAAGCCCTTTACTCTCTCATGACAATATCCGGGCCGGGTCCTTCTCCGTTCCAGTACATTCGCACCAGTTCAGTAAGGATGGTGGTGGTGGGGGCGGTGGTGATGGGTGGCCAGGAAGTGACCTCATCGACGAGCATCAACTCAGCGAGTACCTCTCCTTTCTCAACGAGTCCTCTTCCTCTTCGAGGCCGGGCGATTTCATTAATCCCAGGCTCGAATTGGGTCCGGGGGTTCCTGATTGGGTTCATTCGGTTAACAATGGCGACACCCATTTCCACAAAAGGAGCTATTCGGCCAGCGATGCTTGTCTCGGGTCCGAGGACCCTGCTTTGGGAGTTGGGTTCAAGCCATGTCTTTACTTTGCTAGAGGGTTTTGCAAGAATGGTAGCAATTGCAAGTTTGTGCATGGCGGTTTTGCTGATTCCCTGGACGCTCCTGGTGCTATTGTGGGGTCTCCCAGTAATCTTACTGGTTTCGAACAGCAGGAGGAGATGTTGCGGTTGAAAGTTGAGCAACAGAGATTGGCTGCTGCCTCTCAGTTCATGGCTGGAGGGTCGCCTTCTTCGTACAACAAGTACATGAATTTCCTATTGCAACAGCAGAATGACCCTCAGAGATTTGCGGCCATGATGATGGGGGAAGAACTTTTCAAGTTTGGGCGGTGTCGGCCTGATAGAAACGAACTTCTGGCAATGGCTTCTGTTGAAAAGGCGAACTCAGCTTCAAGACAGATCTACTTGACATTCCCAGCTGAGAGCACTTTTAGAGATGAAGATGTTTCAGAATACTTCAGCAGCAAGTTCGGGCCAGTTCAAGATGTCCGGATCCCATATCAGCAGAAGCGAATGTTTGGGTTCGTAACATTTGTCTTCCCAGAAACTGTCAGGCTTATATTGTCCAAAGGCAATCCTCATTTTATATGTGATTCACGTGTGCTCGTCAAGCCCTACAAGGAGAAGGGAAAAATCCTGGATAAGAGGCAACAACAACAACAGCATTTGGAGAGGGGAGAATTTTCATCATGTTTGAGCCCTGGTAGTCTTGATTCTAGAGATGCATATGATCTCCCACTTGGGGGAAGAATGTTCTACAGTACACAGGATGTGTTATTGAGAAGAAAGTTGGAGGAGCAGGCTGAACTGCAGCAAGCAATTGAACTCCAAGGCAGAAGACTTATGAGTCTGCAGCTCCCGGATTGGAAGAATGAACGCTTAACCCATCATCACCGCAGTCTATCTGTTGGTGCTCATGGTCCTCTGTTAAGCCCTCATTCCCATGCTCAGATCAATCAAAATATCCTTCCATTTGACAGCATGGAACAAGAAGTTGCAGAAGGCCACAGTGACATTCCAGCTGACTTAATCTCTGTGACTGGTGCAATTGCTGAGCAGCAGTCCCAGAAGGAAGATAATTTAGCTTTCATTCACAACAGTGGCAATGGGAATGGCAAAGAAAAGGAGCTAGTCTCCAACCTGGATGCTCCTAATCTTCATAAAAGTGCAGAGCAGGTCCTGCCTGATAGCCTCTTTGCTCGTACAAAATCTGCCGGAGATCATCATCTATCTGAGTTGTCAACCGCTGTGCCCGAAGTTAATGATACTGCCATTACTACTGAAAACAACACATTATCATCAGTCAATTCTGCTGGCTTCATTGCTTCTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 zf-CCCH

Protein Analysis

686

Amino Acids

75.11

Weight (kDa)

5.92

Isoelectric Point (pI)

53.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 66 1.6e-29 AtC3H46 PABC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1569
Acc36I ACCTGC 1 cut(s) 1888
AccIII TCCGGA 1 cut(s) 1212
AciI CCGC 9 cut(s) 207, 353, 486, 801, 889, 1013, 1051, 1618, 1968
AclWI GGATC 2 cut(s) 1210, 1223
AcoI YGGCCR 4 cut(s) 350, 500, 684, 1014
AcsI RAATTY 3 cut(s) 343, 973, 1403
AcuI CTGAAG 1 cut(s) 1165
AcvI CACGTG 1 cut(s) 1322
AfaI GTAC 7 cut(s) 27, 447, 542, 959, 968, 1486, 1927
AfiI CCNNNNNNNGG 6 cut(s) 359, 576, 721, 722, 1465, 1466
AflIII ACRYGT 1 cut(s) 1321
AgsI TTSAA 9 cut(s) 95, 195, 736, 895, 1042, 1097, 1116, 1205, 1547
AjnI CCWGG 8 cut(s) 347, 502, 599, 816, 826, 1359, 1423, 1863
AleI CACNNNNGTG 1 cut(s) 1821
AluBI AGCT 7 cut(s) 678, 1112, 1142, 1579, 1745, 1808, 1852
AluI AGCT 7 cut(s) 678, 1112, 1142, 1579, 1745, 1808, 1852
Alw21I GWGCWC 3 cut(s) 1151, 1329, 1639
Alw26I GTCTC 3 cut(s) 704, 849, 1861
AlwI GGATC 2 cut(s) 1210, 1223
AlwNI CAGNNNCTG 2 cut(s) 1271, 1903
Ama87I CYCGRG 2 cut(s) 137, 701
Aor13HI TCCGGA 1 cut(s) 1212
AoxI GGCC 9 cut(s) 350, 423, 500, 578, 684, 1014, 1058, 1196, 1726
ApeKI GCWGC 6 cut(s) 917, 920, 1185, 1534, 1576, 1780
ApoI RAATTY 3 cut(s) 343, 973, 1403
ArsI GACNNNNNNTTYG 2 cut(s) 188, 220
AseI ATTAAT 1 cut(s) 594
AspS9I GGNCC 9 cut(s) 134, 423, 429, 614, 705, 712, 1196, 1643, 1900
AsuC2I CCSGG 5 cut(s) 422, 427, 582, 618, 1583
AsuHPI GGTGA 3 cut(s) 225, 503, 1607
AsuII TTCGAA 3 cut(s) 35, 341, 867
AvaI CYCGRG 2 cut(s) 137, 701
AvaII GGWCC 7 cut(s) 134, 429, 614, 705, 712, 1643, 1900
BaeGI GKGCMC 1 cut(s) 1977
BalI TGGCCA 1 cut(s) 502
BamHI GGATCC 1 cut(s) 1215
BanII GRGCYC 1 cut(s) 1424
BbrPI CACGTG 1 cut(s) 1322
BbsI GAAGAC 2 cut(s) 1252, 1567
Bbv12I GWGCWC 3 cut(s) 1151, 1329, 1639
BbvI GCAGC 6 cut(s) 904, 907, 1197, 1546, 1588, 1792
BccI CCATC 5 cut(s) 74, 464, 488, 1018, 1617
BceAI ACGGC 1 cut(s) 319
BcgI CGANNNNNNTGC 4 cut(s) 698, 732, 1174, 1208
BciT130I CCWGG 8 cut(s) 349, 504, 601, 818, 828, 1361, 1425, 1865
BcnI CCSGG 5 cut(s) 422, 427, 582, 618, 1583
BcoDI GTCTC 3 cut(s) 704, 849, 1861
BfaI CTAG 4 cut(s) 291, 756, 1440, 1853
BfmI CTRYAG 3 cut(s) 1480, 1532, 1574
BfuAI ACCTGC 1 cut(s) 1888
BglII AGATCT 2 cut(s) 97, 1122
BisI GCNGC 8 cut(s) 353, 918, 921, 1014, 1186, 1535, 1577, 1781
BlpI GCTNAGC 1 cut(s) 1776
BlsI GCNGC 8 cut(s) 354, 919, 922, 1015, 1187, 1536, 1578, 1782
Bme18I GGWCC 7 cut(s) 134, 429, 614, 705, 712, 1643, 1900
BmeT110I CYCGRG 2 cut(s) 137, 701
BmgT120I GGNCC 9 cut(s) 134, 423, 429, 614, 705, 712, 1196, 1643, 1900
BmiI GGNNCC 8 cut(s) 7, 136, 430, 615, 624, 706, 714, 1217
BmrI ACTGGG 1 cut(s) 843
BmsI GCATC 5 cut(s) 218, 535, 682, 1435, 1858
BmuI ACTGGG 1 cut(s) 843
BpiI GAAGAC 2 cut(s) 1252, 1567
BplI GAGNNNNNCTC 4 cut(s) 530, 562, 1841, 1873
BpmI CTGGAG 1 cut(s) 960
Bpu1102I GCTNAGC 1 cut(s) 1776
Bpu14I TTCGAA 3 cut(s) 35, 341, 867
BpuMI CCSGG 5 cut(s) 422, 427, 582, 618, 1583
BsaAI YACGTR 1 cut(s) 1322
BsaBI GATNNNNATC 1 cut(s) 1947
BsaI GGTCTC 1 cut(s) 849
BsaJI CCNNGG 6 cut(s) 599, 617, 708, 816, 1423, 1552
BsaWI WCCGGW 1 cut(s) 1212
BsaXI ACNNNNNCTCC 2 cut(s) 869, 899
Bsc4I CCNNNNNNNGG 6 cut(s) 359, 576, 721, 722, 1465, 1466
Bse1I ACTGG 7 cut(s) 178, 443, 457, 849, 865, 1199, 1768
Bse3DI GCAATG 3 cut(s) 1089, 1834, 2043
Bse8I GATNNNNATC 1 cut(s) 1947
BseAI TCCGGA 1 cut(s) 1212
BseBI CCWGG 8 cut(s) 349, 504, 601, 818, 828, 1361, 1425, 1865
BseDI CCNNGG 6 cut(s) 599, 617, 708, 816, 1423, 1552
BseGI GGATG 3 cut(s) 475, 1498, 1873
BseJI GATNNNNATC 1 cut(s) 1947
BseLI CCNNNNNNNGG 6 cut(s) 359, 576, 721, 722, 1465, 1466
BseMI GCAATG 3 cut(s) 1089, 1834, 2043
BseNI ACTGG 7 cut(s) 178, 443, 457, 849, 865, 1199, 1768
BseRI GAGGAG 2 cut(s) 893, 1532
BseSI GKGCMC 1 cut(s) 1977
BseXI GCAGC 6 cut(s) 904, 907, 1197, 1546, 1588, 1792
BseYI CCCAGC 1 cut(s) 1138
BsgI GTGCAG 1 cut(s) 1911
BshFI GGCC 9 cut(s) 352, 425, 502, 580, 686, 1016, 1060, 1198, 1728
BsiHKAI GWGCWC 3 cut(s) 1151, 1329, 1639
BsiHKCI CYCGRG 2 cut(s) 137, 701
BsiSI CCGG 7 cut(s) 421, 426, 581, 617, 1213, 1583, 1938
BslFI GGGAC 3 cut(s) 120, 198, 1771
BslI CCNNNNNNNGG 6 cut(s) 359, 576, 721, 722, 1465, 1466
BsmAI GTCTC 3 cut(s) 704, 849, 1861
BsmFI GGGAC 3 cut(s) 120, 198, 1771
BsnI GGCC 9 cut(s) 352, 425, 502, 580, 686, 1016, 1060, 1198, 1728
Bso31I GGTCTC 1 cut(s) 849
BsoBI CYCGRG 2 cut(s) 137, 701
Bsp119I TTCGAA 3 cut(s) 35, 341, 867
Bsp1286I GDGCHC 5 cut(s) 1151, 1329, 1424, 1639, 1977
Bsp13I TCCGGA 1 cut(s) 1212
Bsp143I GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
Bsp1720I GCTNAGC 1 cut(s) 1776
BspACI CCGC 9 cut(s) 207, 353, 486, 801, 889, 1013, 1051, 1618, 1968
BspANI GGCC 9 cut(s) 352, 425, 502, 580, 686, 1016, 1060, 1198, 1728
BspEI TCCGGA 1 cut(s) 1212
BspHI TCATGA 1 cut(s) 409
BspLI GGNNCC 8 cut(s) 7, 136, 430, 615, 624, 706, 714, 1217
BspMAI CTGCAG 2 cut(s) 1536, 1578
BspMI ACCTGC 1 cut(s) 1888
BspPI GGATC 2 cut(s) 1210, 1223
BspT104I TTCGAA 3 cut(s) 35, 341, 867
BspTNI GGTCTC 1 cut(s) 849
BsrDI GCAATG 3 cut(s) 1089, 1834, 2043
BsrI ACTGG 7 cut(s) 178, 443, 457, 849, 865, 1199, 1768
BssECI CCNNGG 6 cut(s) 599, 617, 708, 816, 1423, 1552
BssMI GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
BssT1I CCWWGG 1 cut(s) 1552
Bst2UI CCWGG 8 cut(s) 349, 504, 601, 818, 828, 1361, 1425, 1865
Bst4CI ACNGT 4 cut(s) 1273, 1484, 1733, 1823
Bst6I CTCTTC 4 cut(s) 331, 343, 571, 577
BstAPI GCANNNNNTGC 1 cut(s) 1903
BstBAI YACGTR 1 cut(s) 1322
BstBI TTCGAA 3 cut(s) 35, 341, 867
BstC8I GCNNGC 5 cut(s) 394, 688, 1524, 1539, 2038
BstENI CCTNNNNNAGG 1 cut(s) 574
BstF5I GGATG 3 cut(s) 475, 1498, 1873
BstKTI GATC 7 cut(s) 42, 100, 1125, 1218, 1456, 1677, 1945
BstMAI GTCTC 3 cut(s) 704, 849, 1861
BstMBI GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
BstMWI GCNNNNNNNGC 6 cut(s) 692, 830, 1057, 1109, 1333, 1903
BstNI CCWGG 8 cut(s) 349, 504, 601, 818, 828, 1361, 1425, 1865
BstSFI CTRYAG 3 cut(s) 1480, 1532, 1574
BstSLI GKGCMC 1 cut(s) 1977
BstV1I GCAGC 6 cut(s) 904, 907, 1197, 1546, 1588, 1792
BstV2I GAAGAC 2 cut(s) 1252, 1567
BstX2I RGATCY 3 cut(s) 97, 1122, 1215
BstXI CCANNNNNNTGG 1 cut(s) 1024
BstYI RGATCY 3 cut(s) 97, 1122, 1215
BsuRI GGCC 9 cut(s) 352, 425, 502, 580, 686, 1016, 1060, 1198, 1728
BtgZI GCGATG 1 cut(s) 705
BtsCI GGATG 3 cut(s) 475, 1498, 1873
BtsIMutI CAGTG 2 cut(s) 1738, 1828
BveI ACCTGC 1 cut(s) 1888
Cac8I GCNNGC 5 cut(s) 394, 688, 1524, 1539, 2038
CaiI CAGNNNCTG 2 cut(s) 1271, 1903
CciI TCATGA 1 cut(s) 409
Cfr13I GGNCC 9 cut(s) 134, 423, 429, 614, 705, 712, 1196, 1643, 1900
CseI GACGC 1 cut(s) 830
Csp6I GTAC 7 cut(s) 26, 446, 541, 958, 967, 1485, 1926
CviQI GTAC 7 cut(s) 26, 446, 541, 958, 967, 1485, 1926
DpnI GATC 7 cut(s) 41, 99, 1124, 1217, 1455, 1676, 1944
DpnII GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
DrdI GACNNNNNNGTC 1 cut(s) 1569
DseDI GACNNNNNNGTC 1 cut(s) 1569
EaeI YGGCCR 4 cut(s) 350, 500, 684, 1014
Eam1104I CTCTTC 4 cut(s) 331, 343, 571, 577
EarI CTCTTC 4 cut(s) 331, 343, 571, 577
Eco130I CCWWGG 1 cut(s) 1552
Eco24I GRGCYC 1 cut(s) 1424
Eco31I GGTCTC 1 cut(s) 849
Eco47I GGWCC 7 cut(s) 134, 429, 614, 705, 712, 1643, 1900
Eco57I CTGAAG 1 cut(s) 1165
Eco72I CACGTG 1 cut(s) 1322
Eco88I CYCGRG 2 cut(s) 137, 701
EcoNI CCTNNNNNAGG 1 cut(s) 574
EcoO109I RGGNCCY 3 cut(s) 429, 712, 1900
EcoRI GAATTC 1 cut(s) 343
EcoRII CCWGG 8 cut(s) 347, 502, 599, 816, 826, 1359, 1423, 1863
EcoT14I CCWWGG 1 cut(s) 1552
EcoT22I ATGCAT 1 cut(s) 1450
EcoT38I GRGCYC 1 cut(s) 1424
ErhI CCWWGG 1 cut(s) 1552
FaqI GGGAC 3 cut(s) 120, 198, 1771
FauNDI CATATG 1 cut(s) 1450
Fnu4HI GCNGC 8 cut(s) 353, 918, 921, 1014, 1186, 1535, 1577, 1781
FokI GGATG 3 cut(s) 482, 1505, 1880
FriOI GRGCYC 1 cut(s) 1424
Fsp4HI GCNGC 8 cut(s) 353, 918, 921, 1014, 1186, 1535, 1577, 1781
FspBI CTAG 4 cut(s) 291, 756, 1440, 1853
GluI GCNGC 8 cut(s) 353, 918, 921, 1014, 1186, 1535, 1577, 1781
GsaI CCCAGC 1 cut(s) 1142
GsuI CTGGAG 1 cut(s) 960
HaeIII GGCC 9 cut(s) 352, 425, 502, 580, 686, 1016, 1060, 1198, 1728
HapII CCGG 7 cut(s) 421, 426, 581, 617, 1213, 1583, 1938
HgaI GACGC 1 cut(s) 830
HincII GTYRAC 2 cut(s) 646, 1965
HindII GTYRAC 2 cut(s) 646, 1965
HinfI GANTC 7 cut(s) 118, 160, 560, 812, 1316, 1436, 1570
HpaI GTTAAC 1 cut(s) 646
HpaII CCGG 7 cut(s) 421, 426, 581, 617, 1213, 1583, 1938
HphI GGTGA 3 cut(s) 225, 503, 1607
Hpy166II GTNNAC 3 cut(s) 646, 1487, 1965
Hpy188I TCNGA 6 cut(s) 165, 709, 1005, 1174, 1674, 1957
Hpy188III TCNNGA 9 cut(s) 95, 137, 410, 626, 1116, 1205, 1213, 1433, 1440
Hpy8I GTNNAC 3 cut(s) 646, 1487, 1965
Hpy99I CGWCG 1 cut(s) 524
HpyAV CCTTC 9 cut(s) 103, 231, 240, 442, 960, 1342, 1700, 1718, 1786
HpyCH4III ACNGT 4 cut(s) 1273, 1484, 1733, 1823
HpyCH4IV ACGT 1 cut(s) 1321
HpyF10VI GCNNNNNNNGC 6 cut(s) 692, 830, 1057, 1109, 1333, 1903
HpySE526I ACGT 1 cut(s) 1321
Kpn2I TCCGGA 1 cut(s) 1212
KspAI GTTAAC 1 cut(s) 646
Kzo9I GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
LmnI GCTCC 6 cut(s) 675, 829, 1519, 1584, 1849, 1876
Lsp1109I GCAGC 6 cut(s) 904, 907, 1197, 1546, 1588, 1792
LweI GCATC 5 cut(s) 218, 535, 682, 1435, 1858
MaeI CTAG 4 cut(s) 291, 756, 1440, 1853
MaeII ACGT 1 cut(s) 1321
MaeIII GTNAC 4 cut(s) 509, 1249, 1733, 1759
MalI GATC 7 cut(s) 41, 99, 1124, 1217, 1455, 1676, 1944
MboI GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
MfeI CAATTG 3 cut(s) 781, 1542, 1770
MflI RGATCY 3 cut(s) 97, 1122, 1215
MhlI GDGCHC 5 cut(s) 1151, 1329, 1424, 1639, 1977
MlsI TGGCCA 1 cut(s) 502
MluCI AATT 9 cut(s) 343, 608, 781, 973, 1403, 1542, 1770, 1801, 2029
MluNI TGGCCA 1 cut(s) 502
MlyI GAGTC 2 cut(s) 569, 1579
MmeI TCCRAC 2 cut(s) 1494, 1884
Mox20I TGGCCA 1 cut(s) 502
Mph1103I ATGCAT 1 cut(s) 1450
MroI TCCGGA 1 cut(s) 1212
MscI TGGCCA 1 cut(s) 502
MseI TTAA 7 cut(s) 381, 594, 645, 1604, 1652, 1751, 1983
MslI CAYNNNNRTG 4 cut(s) 1022, 1665, 1821, 1887
Msp20I TGGCCA 1 cut(s) 502
MspA1I CMGCKG 3 cut(s) 1142, 1745, 1970
MspI CCGG 7 cut(s) 421, 426, 581, 617, 1213, 1583, 1938
MunI CAATTG 3 cut(s) 781, 1542, 1770
MvaI CCWGG 8 cut(s) 349, 504, 601, 818, 828, 1361, 1425, 1865
MwoI GCNNNNNNNGC 6 cut(s) 692, 830, 1057, 1109, 1333, 1903
NciI CCSGG 5 cut(s) 422, 427, 582, 618, 1583
NdeI CATATG 1 cut(s) 1450
NdeII GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
NlaIV GGNNCC 8 cut(s) 7, 136, 430, 615, 624, 706, 714, 1217
NmeAIII GCCGAG 1 cut(s) 130
NmuCI GTSAC 3 cut(s) 509, 1733, 1759
NsiI ATGCAT 1 cut(s) 1450
NspV TTCGAA 3 cut(s) 35, 341, 867
OliI CACNNNNGTG 1 cut(s) 1821
PagI TCATGA 1 cut(s) 409
PcsI WCGNNNNNNNCGW 1 cut(s) 953
PfeI GAWTC 5 cut(s) 118, 160, 812, 1316, 1436
PfoI TCCNGGA 2 cut(s) 1359, 1581
PkrI GCNGC 8 cut(s) 354, 919, 922, 1015, 1187, 1536, 1578, 1782
PleI GAGTC 2 cut(s) 568, 1578
PmaCI CACGTG 1 cut(s) 1322
PmlI CACGTG 1 cut(s) 1322
PpsI GAGTC 2 cut(s) 568, 1578
Ppu21I YACGTR 1 cut(s) 1322
PpuMI RGGWCCY 3 cut(s) 429, 712, 1900
PshBI ATTAAT 1 cut(s) 594
Psp5II RGGWCCY 3 cut(s) 429, 712, 1900
Psp6I CCWGG 8 cut(s) 347, 502, 599, 816, 826, 1359, 1423, 1863
PspCI CACGTG 1 cut(s) 1322
PspFI CCCAGC 1 cut(s) 1138
PspGI CCWGG 8 cut(s) 347, 502, 599, 816, 826, 1359, 1423, 1863
PspN4I GGNNCC 8 cut(s) 7, 136, 430, 615, 624, 706, 714, 1217
PspPI GGNCC 9 cut(s) 134, 423, 429, 614, 705, 712, 1196, 1643, 1900
PspPPI RGGWCCY 3 cut(s) 429, 712, 1900
PstI CTGCAG 2 cut(s) 1536, 1578
PstNI CAGNNNCTG 2 cut(s) 1271, 1903
PsuI RGATCY 3 cut(s) 97, 1122, 1215
PvuII CAGCTG 2 cut(s) 1142, 1745
RsaI GTAC 7 cut(s) 27, 447, 542, 959, 968, 1486, 1927
RsaNI GTAC 7 cut(s) 26, 446, 541, 958, 967, 1485, 1926
RseI CAYNNNNRTG 4 cut(s) 1022, 1665, 1821, 1887
SaqAI TTAA 7 cut(s) 381, 594, 645, 1604, 1652, 1751, 1983
SatI GCNGC 8 cut(s) 353, 918, 921, 1014, 1186, 1535, 1577, 1781
Sau3AI GATC 7 cut(s) 39, 97, 1122, 1215, 1453, 1674, 1942
Sau96I GGNCC 9 cut(s) 134, 423, 429, 614, 705, 712, 1196, 1643, 1900
SchI GAGTC 2 cut(s) 569, 1579
SduI GDGCHC 5 cut(s) 1151, 1329, 1424, 1639, 1977
SfaNI GCATC 5 cut(s) 218, 535, 682, 1435, 1858
SfcI CTRYAG 3 cut(s) 1480, 1532, 1574
SfuI TTCGAA 3 cut(s) 35, 341, 867
SinI GGWCC 7 cut(s) 134, 429, 614, 705, 712, 1643, 1900
SmiMI CAYNNNNRTG 4 cut(s) 1022, 1665, 1821, 1887
Sse9I AATT 9 cut(s) 343, 608, 781, 973, 1403, 1542, 1770, 1801, 2029
SsiI CCGC 9 cut(s) 207, 353, 486, 801, 889, 1013, 1051, 1618, 1968
SspMI CTAG 4 cut(s) 291, 756, 1440, 1853
StyI CCWWGG 1 cut(s) 1552
TaaI ACNGT 4 cut(s) 1273, 1484, 1733, 1823
TaiI ACGT 1 cut(s) 1324
TaqI TCGA 6 cut(s) 35, 341, 519, 575, 606, 867
TasI AATT 9 cut(s) 343, 608, 781, 973, 1403, 1542, 1770, 1801, 2029
TatI WGTACW 4 cut(s) 25, 445, 966, 1484
TauI GCSGC 2 cut(s) 355, 1016
TfiI GAWTC 5 cut(s) 118, 160, 812, 1316, 1436
Tru1I TTAA 7 cut(s) 381, 594, 645, 1604, 1652, 1751, 1983
Tru9I TTAA 7 cut(s) 381, 594, 645, 1604, 1652, 1751, 1983
TscAI CASTG 2 cut(s) 1738, 1828
TseFI GTSAC 3 cut(s) 509, 1733, 1759
TseI GCWGC 6 cut(s) 917, 920, 1185, 1534, 1576, 1780
Tsp45I GTSAC 3 cut(s) 509, 1733, 1759
TspGWI ACGGA 1 cut(s) 427
TspRI CASTG 2 cut(s) 1738, 1828
VpaK11BI GGWCC 7 cut(s) 134, 429, 614, 705, 712, 1643, 1900
VspI ATTAAT 1 cut(s) 594
XagI CCTNNNNNAGG 1 cut(s) 574
XapI RAATTY 3 cut(s) 343, 973, 1403
XbaI TCTAGA 1 cut(s) 1439
XcmI CCANNNNNNNNNTGG 2 cut(s) 73, 607
XspI CTAG 4 cut(s) 291, 756, 1440, 1853
Zsp2I ATGCAT 1 cut(s) 1450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.