pycom04g03030

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
2801656 .. 2813805
12150 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g03030.8

Sequence Viewer

Length: 3519 bp
ATGGAGGAGGTGTGCGAGGGCAAGGACTTCTCCTTCCCCAAGCAAGAGGAGACTATCCTCAAGCTCTGGTCCGAAATCAAGGCCTTCGAAACCCAATTGGCGCGCACCGAGGGCCAGCCCGAGTACGTCTTCTATGACGGTCCTCCATTCGCCACCGGACTCCCACACTACGGCCACATACTGGCCGGCACCATCAAAGACATCATCACCCGATTCTTCTCCATGACGGGCCACCACGTCATCCGCCGCTTCGGCTGGGACTGCCACGGTCTGCCGGTGGAGAACGAGATCGATCGGATGCTCGGGATCAAGCTTCGGGAAGATGTGCTGAAGATGGGGATTGATAAGTACAATGAAGCCTGCAGGAGCATTGTTACTCGGTACGTGGGGGAGTGGGAGAAGGTTATTTCGCGGACGGGGCGGTGGATTGATTTCAATAACGATTACAAGACGATGGATTTGAAGTTCATGGAGAGCGTTTGGTGGGTCTTTGGCCAGTTATTTGAAAAGGGTCTTGTTTATAAAGGCTTCAAGGTCATGCCATACAGCACTGGTTGCAAGACACCGCTCTCCAATTTTGAGGCTGGTCAAGAGTACAGGGATGTACCTGATCCTAACATTATGGTGACTTTTCCAATTGTTGGATCGATCCGCAAAAGGCAAATTTTGTGGCTTGGACAACTACACCATGGACCCTCCCGAGCAATTTGGCCCTTTGTGTCAATGCAAATTTTACTTATGCCAGTTCGCAACAAGTACTCCGGAAAAGTTTATGTTGTTGCTGAATCTCGGTTGTCAGCTCTTCCTAATGAGAAACCAAAAGAAAATGTGGCAGGATCTGTTGGTGATTCAAAAAAGCTAAATTCAAGGGTCAAGGGATCCTCAGGTGGGAAAAGGGAAACTGTGGACACTTCATTTGAAGTATTGGAGAAATTCTCTGGTTCTTCGTTAGTGGGAAAGAAGTATGAACCACTGTTTGACTACTTTATGGAGTTCTCTGATGTGGCATTTAGAGTTGTTATGGACAACTATGTTACCGATGACAGTGGTACTGGTATTGTGCATTGTGCTCCTGCATTTGGTGAAGATGATTATCGTGTTTGCCTTGAAAATCAAGTAATCAACAAGGGAGAGAACTTGATTGTAGCTGTTGATGATGATGGATGCTTTACCGAAAGAATTACCGACTTCAGCAAGTGCTATGTCAAGGATGCAGATAAAGATATTATTGAAGCAGTGAAGGCAAAAGGAAGGCTAGTGAAGTCTGGAACGTTTACCCATTCTTATCCCTTTTGCTGGAGATCTAAAACTCCGCTTATTTACAGAGCTGTTCCAAGCTGGTTTATCCGAGTGGAGCTGTTGAAAGAAAAATTGTTAGAAAACAACAAGCAGACTTACTGGGTTCCTGATTTTGTCAAGGAAAAGCGCTTTCACAATTGGCTGGAGAATGCAAGAGATTGGGCTGTTAGTCGAAGTAGATTTTGGGGCACTCCACTTCCAGTCTGGATTAGTGAGGACGGTGAAGAAATTGTTGTAATGGATTCTATTCAGAAGCTTGAAGAGCTTTCTGGTGTTAAGGTTTTCGATCTGCACCGCCACAATATTGATCACATTACTATTCCCTCAAGTCGAGGTCCCAAATTTGGTGTTCTTCGACGTATAGATGATGTGTTTGATTGTTGGTTTGAGAGTGGGTCCATGCCTTATGCTTATATCCACTATCCTTTTGAGAATGTTGAACTTTTTGAGAAAAATTTCCCTGGCCATTTTGTGGCTGAGGGGCTAGATCAGACTCGTGGATGGTTCTACACTCTTATGGTGTTATCTACGGCGTTATTTGGGAAACCTGCTTTTAGGAACCTCATTTGCAATGGACTTGTCCTTGCTGAGGATGGGAAAAAAATGAGTAAAAGTTTGAAAAATTATCCTTCACCAATGGAAGTTATCGATGATTATGGAGCTGATGCACTACGACTATACCTCATTAACTCTCCTGTTGTGCGTGCGGAGCCATTACGTTTCAAGAAGGAAGGAGTTTTTGGTGTTGTCAAGGATGTATTTCTTCCTTGGTACAATGCATATCGGTTCCTTGTTCAGAATGCAAAGAGACTTGAAGTTGAGGGGTTTTCCCCTTTCCTCCCTGTTGATCGATCCACTGTACAGAAGTCGTCTAATGTGCTTGACCAGTGGATCAATTCAGCCACACAGAGTCTTGTTTATTTTGTTCAGCAAGAGATGAATGGTTATCGACTTTATACGGTGGTTCCATATCTTTTGAAGTTTCTTGACAACTTAACAAATATTTATGTGCGGTTCAATCGGAAGAGGCTAAAGGGTCGAACTGGTGAAGAGGATTGTAGAATGGCACTCTCAACTCTCTACAATGTCCTCTTGGTGTCTTGTAAAGTAATGGCACCATTAACACCGTTCTTCACGGAGGTCCTATATCAAAATATGCGGAAAGCTTTGAATGAGTCAGAGGAAAGCATTCATTTTTGCAGTTTTCCTGAAGGAGAAGGAAAGACAGACGAGCGTATAGAGCAAAGTGTTACAAGAATGATGACAACAATTGATCTTGCCCGTAATATTCGCGAGCGTCACAACAAGCCTCTCAAAACACCCCTGAGGGAGATGGTTATTGTTCATCCTGATGCAGACTTTCTTGATGATATTGGTGGAAAGCTAAGAGAGTATGTATTGGAGGAACTTAATGTAAGATCTCTTGTCCCATGTAATGATACACTGAACGTATTAGGGAAGCGACTTGGAAAATCTATGGGAGTTGTTGCCAAAGAAGTCAAGGCCATGTCTCAAGAAAGCATTTTAGCATTCGAGAAAGCTGGAGAAGTTACTCTTTCTGGTCATTGTTTAAAGCTGGGTGATATTAAGGTTGTTAGGGATTTCAAACGTCCTAATGGAACGACAGAAAAGGAGATTGATGCTACAGGGGACGGTGATGTTTTGGTGATTTTGGATTTACGTCCAGATGAGTCATTGTTTGAGGCTGGTATTGCTCGTGAGATTGTGAACAGAATTCAGAAGTTAAGGAAGAAAGCTGCCCTTGAACCTACTGACATGATGGAGGCATACTTTGAATCGTTGGATCAAGATAAATCAGTCTCACAACGGGTTTTGCACTCCCAGGAACAATACATTAGGGATGTCATTGGTTTGCCATTGCTTCTGTCTAGTGTGATGCCATCAGATGCTGTCATTGTTGCGGAGGAGAGTTTCCATGGGATATCTGGCATGTCATTTGTTATCAGTTTGACCCGACCTGCACCAGTGCTTAACTCAGATGCAATTCTTTCTCTATATTCAGGAAACACAGAATTTGCACGGGCTCTGCAAACGTATTTGTTATCAAGGGATCATGCAAATTTGAAGTCCGAGTTTCAACATGGAAAGGGAAAGATAAATGTTGATTGCATTGAGAACATCCCTGCTGTGGAACTGGTGTTGGGGGATCATGTATTCTTGACCGTCGGGGACCTCATTTCTAGGACAAAATCTCAGTAG

Protein Analysis

1173

Amino Acids

133.76

Weight (kDa)

6.25

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 522
Acc36I ACCTGC 2 cut(s) 1855, 3286
AccB1I GGYRCC 2 cut(s) 188, 2413
AccB7I CCANNNNNTGG 3 cut(s) 181, 641, 1771
AccBSI CCGCTC 1 cut(s) 568
AccII CGCG 3 cut(s) 103, 412, 2592
AccIII TCCGGA 1 cut(s) 761
AclI AACGTT 1 cut(s) 1271
AcoI YGGCCR 4 cut(s) 172, 183, 493, 1762
AcsI RAATTY 9 cut(s) 663, 729, 862, 932, 1640, 1753, 3033, 3332, 3379
AcuI CTGAAG 3 cut(s) 350, 1174, 2529
AfaI GTAC 9 cut(s) 125, 350, 383, 596, 606, 758, 1051, 2072, 2160
AfeI AGCGCT 1 cut(s) 1427
AjiI CACGTC 1 cut(s) 238
AjnI CCWGG 2 cut(s) 1759, 3141
AjuI GAANNNNNNNTTGG 4 cut(s) 1465, 1497, 2022, 2054
AloI GAACNNNNNNTCC 2 cut(s) 449, 481
Alw21I GWGCWC 1 cut(s) 1072
Alw26I GTCTC 4 cut(s) 44, 2101, 2814, 3124
AlwNI CAGNNNCTG 2 cut(s) 839, 3209
Ama87I CYCGRG 3 cut(s) 119, 302, 699
Aor13HI TCCGGA 1 cut(s) 761
Aor51HI AGCGCT 1 cut(s) 1427
AoxI GGCC 9 cut(s) 81, 112, 172, 183, 229, 493, 710, 1762, 2802
ApeKI GCWGC 1 cut(s) 3056
ApoI RAATTY 9 cut(s) 663, 729, 862, 932, 1640, 1753, 3033, 3332, 3379
ArsI GACNNNNNNTTYG 6 cut(s) 442, 474, 899, 931, 3371, 3403
Asp700I GAANNNNTTC 2 cut(s) 1754, 2487
AspLEI GCGC 3 cut(s) 103, 105, 1428
AsuII TTCGAA 1 cut(s) 87
AvaI CYCGRG 3 cut(s) 119, 302, 699
AvaII GGWCC 7 cut(s) 69, 140, 692, 1634, 1695, 2440, 3490
AxyI CCTNAGG 2 cut(s) 883, 2624
BaeGI GKGCMC 1 cut(s) 1490
BalI TGGCCA 2 cut(s) 495, 1764
BamHI GGATCC 1 cut(s) 878
BanI GGYRCC 2 cut(s) 188, 2413
BanII GRGCYC 1 cut(s) 3346
BauI CACGAG 2 cut(s) 1794, 3015
BbsI GAAGAC 1 cut(s) 121
Bbv12I GWGCWC 1 cut(s) 1072
BbvCI CCTCAGC 2 cut(s) 1776, 1887
BbvI GCAGC 1 cut(s) 3043
BccI CCATC 9 cut(s) 200, 328, 448, 1154, 1794, 1886, 2626, 3073, 3208
BceAI ACGGC 2 cut(s) 187, 1845
BciT130I CCWGG 2 cut(s) 1761, 3143
BclI TGATCA 1 cut(s) 1606
BcoDI GTCTC 4 cut(s) 44, 2101, 2814, 3124
BfaI CTAG 4 cut(s) 1256, 1784, 3189, 3501
BfmI CTRYAG 2 cut(s) 361, 2943
BfoI RGCGCY 1 cut(s) 1429
BfuAI ACCTGC 2 cut(s) 1855, 3286
BglI GCCNNNNNGGC 1 cut(s) 252
BglII AGATCT 2 cut(s) 1301, 2717
BisI GCNGC 2 cut(s) 247, 3057
BlsI GCNGC 2 cut(s) 248, 3058
BmcAI AGTACT 1 cut(s) 758
Bme1390I CCNGG 2 cut(s) 1761, 3143
Bme18I GGWCC 7 cut(s) 69, 140, 692, 1634, 1695, 2440, 3490
BmeT110I CYCGRG 3 cut(s) 119, 302, 699
BmgBI CACGTC 1 cut(s) 238
BmrFI CCNGG 2 cut(s) 1761, 3143
BmrI ACTGGG 1 cut(s) 1408
BmsI GCATC 9 cut(s) 288, 1154, 1201, 1954, 2641, 2929, 3186, 3196, 3289
BmuI ACTGGG 1 cut(s) 1408
BpiI GAAGAC 1 cut(s) 121
BplI GAGNNNNNCTC 2 cut(s) 920, 952
BpmI CTGGAG 3 cut(s) 1318, 1463, 2862
Bpu10I CCTNAGC 2 cut(s) 1776, 1887
Bpu14I TTCGAA 1 cut(s) 87
BpuEI CTTGAG 3 cut(s) 44, 1609, 2796
Bsa29I ATCGAT 4 cut(s) 291, 647, 1947, 2149
BsaAI YACGTR 1 cut(s) 385
BsaBI GATNNNNATC 1 cut(s) 1092
BsaJI CCNNGG 7 cut(s) 108, 265, 688, 1759, 2066, 3141, 3235
BsaWI WCCGGW 2 cut(s) 155, 761
BsaXI ACNNNNNCTCC 3 cut(s) 26, 743, 773
Bse118I RCCGGY 2 cut(s) 185, 274
Bse21I CCTNAGG 2 cut(s) 883, 2624
Bse3DI GCAATG 2 cut(s) 1876, 3176
Bse8I GATNNNNATC 1 cut(s) 1092
BseAI TCCGGA 1 cut(s) 761
BseBI CCWGG 2 cut(s) 1761, 3143
BseCI ATCGAT 4 cut(s) 291, 647, 1947, 2149
BseDI CCNNGG 7 cut(s) 108, 265, 688, 1759, 2066, 3141, 3235
BseJI GATNNNNATC 1 cut(s) 1092
BseMI GCAATG 2 cut(s) 1876, 3176
BseMII CTCAG 5 cut(s) 897, 1767, 1878, 2615, 3309
BsePI GCGCGC 1 cut(s) 101
BseRI GAGGAG 3 cut(s) 20, 62, 3239
BseSI GKGCMC 1 cut(s) 1490
BseXI GCAGC 1 cut(s) 3043
BseYI CCCAGC 2 cut(s) 255, 2875
BsgI GTGCAG 2 cut(s) 1574, 3264
Bsh1236I CGCG 3 cut(s) 103, 412, 2592
Bsh1285I CGRYCG 1 cut(s) 295
BshFI GGCC 9 cut(s) 83, 114, 174, 185, 231, 495, 712, 1764, 2804
BshNI GGYRCC 2 cut(s) 188, 2413
BshVI ATCGAT 4 cut(s) 291, 647, 1947, 2149
BsiEI CGRYCG 1 cut(s) 295
BsiHKAI GWGCWC 1 cut(s) 1072
BsiHKCI CYCGRG 3 cut(s) 119, 302, 699
BsiSI CCGG 4 cut(s) 156, 186, 275, 762
BslFI GGGAC 5 cut(s) 272, 1620, 2711, 2963, 3503
BsmAI GTCTC 4 cut(s) 44, 2101, 2814, 3124
BsmFI GGGAC 5 cut(s) 272, 1620, 2711, 2963, 3503
BsmI GAATGC 4 cut(s) 1453, 2104, 2487, 2828
BsnI GGCC 9 cut(s) 83, 114, 174, 185, 231, 495, 712, 1764, 2804
BsoBI CYCGRG 3 cut(s) 119, 302, 699
Bsp119I TTCGAA 1 cut(s) 87
Bsp1286I GDGCHC 3 cut(s) 1072, 1490, 3346
Bsp13I TCCGGA 1 cut(s) 761
Bsp1407I TGTACA 1 cut(s) 2158
Bsp19I CCATGG 2 cut(s) 688, 3235
Bsp68I TCGCGA 1 cut(s) 2592
BspANI GGCC 9 cut(s) 83, 114, 174, 185, 231, 495, 712, 1764, 2804
BspCNI CTCAG 5 cut(s) 896, 1768, 1879, 2616, 3308
BspDI ATCGAT 4 cut(s) 291, 647, 1947, 2149
BspEI TCCGGA 1 cut(s) 761
BspFNI CGCG 3 cut(s) 103, 412, 2592
BspMAI CTGCAG 1 cut(s) 365
BspMI ACCTGC 2 cut(s) 1855, 3286
BspQI GCTCTTC 2 cut(s) 807, 1554
BspT104I TTCGAA 1 cut(s) 87
BspT107I GGYRCC 2 cut(s) 188, 2413
BsrBI CCGCTC 1 cut(s) 568
BsrDI GCAATG 2 cut(s) 1876, 3176
BsrFI RCCGGY 2 cut(s) 185, 274
BsrGI TGTACA 1 cut(s) 2158
BssAI RCCGGY 2 cut(s) 185, 274
BssECI CCNNGG 7 cut(s) 108, 265, 688, 1759, 2066, 3141, 3235
BssHII GCGCGC 1 cut(s) 101
BssSI CACGAG 2 cut(s) 1794, 3015
BssT1I CCWWGG 3 cut(s) 688, 2066, 3235
Bst2BI CACGAG 2 cut(s) 1794, 3015
Bst2UI CCWGG 2 cut(s) 1761, 3143
Bst6I CTCTTC 4 cut(s) 807, 1554, 2318, 2343
BstAPI GCANNNNNTGC 1 cut(s) 555
BstAUI TGTACA 1 cut(s) 2158
BstBAI YACGTR 1 cut(s) 385
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 6 cut(s) 103, 116, 187, 361, 2004, 2594
BstDEI CTNAG 7 cut(s) 883, 1776, 1887, 2624, 2684, 3295, 3513
BstDSI CCRYGG 3 cut(s) 265, 688, 3235
BstENI CCTNNNNNAGG 1 cut(s) 1886
BstFNI CGCG 3 cut(s) 103, 412, 2592
BstH2I RGCGCY 1 cut(s) 1429
BstHHI GCGC 3 cut(s) 103, 105, 1428
BstMAI GTCTC 4 cut(s) 44, 2101, 2814, 3124
BstMCI CGRYCG 1 cut(s) 295
BstNI CCWGG 2 cut(s) 1761, 3143
BstNSI RCATGY 1 cut(s) 3253
BstSCI CCNGG 2 cut(s) 1759, 3141
BstSFI CTRYAG 2 cut(s) 361, 2943
BstSLI GKGCMC 1 cut(s) 1490
BstUI CGCG 3 cut(s) 103, 412, 2592
BstV1I GCAGC 1 cut(s) 3043
BstV2I GAAGAC 1 cut(s) 121
BstX2I RGATCY 4 cut(s) 836, 878, 1301, 2717
BstYI RGATCY 4 cut(s) 836, 878, 1301, 2717
Bsu15I ATCGAT 4 cut(s) 291, 647, 1947, 2149
Bsu36I CCTNAGG 2 cut(s) 883, 2624
BsuRI GGCC 9 cut(s) 83, 114, 174, 185, 231, 495, 712, 1764, 2804
BsuTUI ATCGAT 4 cut(s) 291, 647, 1947, 2149
BtgI CCRYGG 3 cut(s) 265, 688, 3235
BtrI CACGTC 1 cut(s) 238
BtsI GCAGTG 1 cut(s) 1242
BtsIMutI CAGTG 8 cut(s) 549, 971, 1051, 1242, 2154, 2192, 2741, 3291
BtuMI TCGCGA 1 cut(s) 2592
BveI ACCTGC 2 cut(s) 1855, 3286
Cac8I GCNNGC 6 cut(s) 103, 116, 187, 361, 2004, 2594
CaiI CAGNNNCTG 2 cut(s) 839, 3209
CfoI GCGC 3 cut(s) 103, 105, 1428
Cfr10I RCCGGY 2 cut(s) 185, 274
ClaI ATCGAT 4 cut(s) 291, 647, 1947, 2149
CseI GACGC 1 cut(s) 2585
Csp6I GTAC 9 cut(s) 124, 349, 382, 595, 605, 757, 1050, 2071, 2159
CspCI CAANNNNNGTGG 2 cut(s) 650, 685
CviQI GTAC 9 cut(s) 124, 349, 382, 595, 605, 757, 1050, 2071, 2159
DdeI CTNAG 7 cut(s) 883, 1776, 1887, 2624, 2684, 3295, 3513
DraI TTTAAA 1 cut(s) 2871
EaeI YGGCCR 4 cut(s) 172, 183, 493, 1762
Eam1104I CTCTTC 4 cut(s) 807, 1554, 2318, 2343
EarI CTCTTC 4 cut(s) 807, 1554, 2318, 2343
EciI GGCGGA 1 cut(s) 233
Eco130I CCWWGG 3 cut(s) 688, 2066, 3235
Eco147I AGGCCT 1 cut(s) 83
Eco24I GRGCYC 1 cut(s) 3346
Eco32I GATATC 1 cut(s) 3243
Eco47I GGWCC 7 cut(s) 69, 140, 692, 1634, 1695, 2440, 3490
Eco47III AGCGCT 1 cut(s) 1427
Eco57I CTGAAG 3 cut(s) 350, 1174, 2529
Eco81I CCTNAGG 2 cut(s) 883, 2624
Eco88I CYCGRG 3 cut(s) 119, 302, 699
EcoNI CCTNNNNNAGG 1 cut(s) 1886
EcoO109I RGGNCCY 3 cut(s) 1634, 2440, 3490
EcoRI GAATTC 1 cut(s) 3033
EcoRII CCWGG 2 cut(s) 1759, 3141
EcoRV GATATC 1 cut(s) 3243
EcoT14I CCWWGG 3 cut(s) 688, 2066, 3235
EcoT22I ATGCAT 1 cut(s) 2080
EcoT38I GRGCYC 1 cut(s) 3346
ErhI CCWWGG 3 cut(s) 688, 2066, 3235
FalI AAGNNNNNCTT 4 cut(s) 2838, 2870, 3045, 3077
FaqI GGGAC 5 cut(s) 272, 1620, 2711, 2963, 3503
FbaI TGATCA 1 cut(s) 1606
Fnu4HI GCNGC 2 cut(s) 247, 3057
FriOI GRGCYC 1 cut(s) 3346
Fsp4HI GCNGC 2 cut(s) 247, 3057
FspBI CTAG 4 cut(s) 1256, 1784, 3189, 3501
GlaI GCGC 3 cut(s) 102, 104, 1427
GluI GCNGC 2 cut(s) 247, 3057
GsaI CCCAGC 2 cut(s) 259, 2879
GsuI CTGGAG 3 cut(s) 1318, 1463, 2862
HaeII RGCGCY 1 cut(s) 1429
HaeIII GGCC 9 cut(s) 83, 114, 174, 185, 231, 495, 712, 1764, 2804
HapII CCGG 4 cut(s) 156, 186, 275, 762
HgaI GACGC 1 cut(s) 2585
HhaI GCGC 3 cut(s) 103, 105, 1428
Hin6I GCGC 3 cut(s) 101, 103, 1426
HinP1I GCGC 3 cut(s) 101, 103, 1426
HindIII AAGCTT 3 cut(s) 311, 1553, 2463
HpaII CCGG 4 cut(s) 156, 186, 275, 762
Hpy166II GTNNAC 3 cut(s) 907, 1275, 3028
Hpy8I GTNNAC 3 cut(s) 907, 1275, 3028
Hpy99I CGWCG 2 cut(s) 1659, 3488
HpyF3I CTNAG 7 cut(s) 883, 1776, 1887, 2624, 2684, 3295, 3513
HspAI GCGC 3 cut(s) 101, 103, 1426
Kpn2I TCCGGA 1 cut(s) 761
KroI GCCGGC 1 cut(s) 185
KroNI GCCGGC 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 1606
LguI GCTCTTC 2 cut(s) 807, 1554
LmnI GCTCC 5 cut(s) 366, 1075, 1354, 1958, 2008
Lsp1109I GCAGC 1 cut(s) 3043
LweI GCATC 9 cut(s) 288, 1154, 1201, 1954, 2641, 2929, 3186, 3196, 3289
MaeI CTAG 4 cut(s) 1256, 1784, 3189, 3501
MaeIII GTNAC 6 cut(s) 373, 625, 1033, 2548, 2597, 2848
MbiI CCGCTC 1 cut(s) 568
MfeI CAATTG 4 cut(s) 95, 636, 1435, 2568
MflI RGATCY 4 cut(s) 836, 878, 1301, 2717
MhlI GDGCHC 3 cut(s) 1072, 1490, 3346
MlsI TGGCCA 2 cut(s) 495, 1764
MluNI TGGCCA 2 cut(s) 495, 1764
MlyI GAGTC 5 cut(s) 153, 1786, 2218, 2483, 2999
MmeI TCCRAC 2 cut(s) 622, 3081
Mox20I TGGCCA 2 cut(s) 495, 1764
Mph1103I ATGCAT 1 cut(s) 2080
MroI TCCGGA 1 cut(s) 761
MroNI GCCGGC 1 cut(s) 185
MroXI GAANNNNTTC 2 cut(s) 1754, 2487
MscI TGGCCA 2 cut(s) 495, 1764
MseI TTAA 9 cut(s) 1575, 1986, 2294, 2420, 2709, 2870, 2886, 3044, 3291
MslI CAYNNNNRTG 3 cut(s) 623, 1814, 2649
Msp20I TGGCCA 2 cut(s) 495, 1764
MspI CCGG 4 cut(s) 156, 186, 275, 762
MspR9I CCNGG 2 cut(s) 1761, 3143
MunI CAATTG 4 cut(s) 95, 636, 1435, 2568
Mva1269I GAATGC 4 cut(s) 1453, 2104, 2487, 2828
MvaI CCWGG 2 cut(s) 1761, 3143
MvnI CGCG 3 cut(s) 103, 412, 2592
NaeI GCCGGC 1 cut(s) 187
NcoI CCATGG 2 cut(s) 688, 3235
NgoMIV GCCGGC 1 cut(s) 185
NmuCI GTSAC 2 cut(s) 625, 2597
NruI TCGCGA 1 cut(s) 2592
NsiI ATGCAT 1 cut(s) 2080
NspI RCATGY 1 cut(s) 3253
NspV TTCGAA 1 cut(s) 87
PauI GCGCGC 1 cut(s) 101
PceI AGGCCT 1 cut(s) 83
PciSI GCTCTTC 2 cut(s) 807, 1554
PctI GAATGC 4 cut(s) 1453, 2104, 2487, 2828
PdiI GCCGGC 1 cut(s) 187
PdmI GAANNNNTTC 2 cut(s) 1754, 2487
PfeI GAWTC 5 cut(s) 213, 785, 848, 1541, 3095
PflMI CCANNNNNTGG 3 cut(s) 181, 641, 1771
PkrI GCNGC 2 cut(s) 248, 3058
Ple19I CGATCG 1 cut(s) 295
PleI GAGTC 5 cut(s) 153, 1786, 2217, 2482, 2998
PpsI GAGTC 5 cut(s) 153, 1786, 2217, 2482, 2998
Ppu21I YACGTR 1 cut(s) 385
PpuMI RGGWCCY 3 cut(s) 1634, 2440, 3490
PsiI TTATAA 1 cut(s) 522
Psp1406I AACGTT 1 cut(s) 1271
Psp5II RGGWCCY 3 cut(s) 1634, 2440, 3490
Psp6I CCWGG 2 cut(s) 1759, 3141
PspFI CCCAGC 2 cut(s) 255, 2875
PspGI CCWGG 2 cut(s) 1759, 3141
PspPPI RGGWCCY 3 cut(s) 1634, 2440, 3490
PstI CTGCAG 1 cut(s) 365
PstNI CAGNNNCTG 2 cut(s) 839, 3209
PsuI RGATCY 4 cut(s) 836, 878, 1301, 2717
PteI GCGCGC 1 cut(s) 101
PvuI CGATCG 1 cut(s) 295
RruI TCGCGA 1 cut(s) 2592
RsaI GTAC 9 cut(s) 125, 350, 383, 596, 606, 758, 1051, 2072, 2160
RsaNI GTAC 9 cut(s) 124, 349, 382, 595, 605, 757, 1050, 2071, 2159
RseI CAYNNNNRTG 3 cut(s) 623, 1814, 2649
SapI GCTCTTC 2 cut(s) 807, 1554
SaqAI TTAA 9 cut(s) 1575, 1986, 2294, 2420, 2709, 2870, 2886, 3044, 3291
SatI GCNGC 2 cut(s) 247, 3057
SbfI CCTGCAGG 1 cut(s) 365
ScaI AGTACT 1 cut(s) 758
SchI GAGTC 5 cut(s) 153, 1786, 2218, 2483, 2999
ScrFI CCNGG 2 cut(s) 1761, 3143
SdaI CCTGCAGG 1 cut(s) 365
SduI GDGCHC 3 cut(s) 1072, 1490, 3346
SfaNI GCATC 9 cut(s) 288, 1154, 1201, 1954, 2641, 2929, 3186, 3196, 3289
SfcI CTRYAG 2 cut(s) 361, 2943
SfuI TTCGAA 1 cut(s) 87
SinI GGWCC 7 cut(s) 69, 140, 692, 1634, 1695, 2440, 3490
SmiMI CAYNNNNRTG 3 cut(s) 623, 1814, 2649
SmlI CTYRAG 3 cut(s) 59, 1624, 2811
SmoI CTYRAG 3 cut(s) 59, 1624, 2811
Sse8387I CCTGCAGG 1 cut(s) 365
SseBI AGGCCT 1 cut(s) 83
SspI AATATT 3 cut(s) 1603, 2302, 2587
SspMI CTAG 4 cut(s) 1256, 1784, 3189, 3501
StuI AGGCCT 1 cut(s) 83
StyD4I CCNGG 2 cut(s) 1759, 3141
StyI CCWWGG 3 cut(s) 688, 2066, 3235
TatI WGTACW 4 cut(s) 348, 594, 756, 2158
TauI GCSGC 1 cut(s) 249
TfiI GAWTC 5 cut(s) 213, 785, 848, 1541, 3095
Tru1I TTAA 9 cut(s) 1575, 1986, 2294, 2420, 2709, 2870, 2886, 3044, 3291
Tru9I TTAA 9 cut(s) 1575, 1986, 2294, 2420, 2709, 2870, 2886, 3044, 3291
TscAI CASTG 8 cut(s) 556, 978, 1051, 1242, 2161, 2192, 2748, 3291
TseFI GTSAC 2 cut(s) 625, 2597
TseI GCWGC 1 cut(s) 3056
Tsp45I GTSAC 2 cut(s) 625, 2597
TspDTI ATGAA 7 cut(s) 369, 457, 903, 981, 2252, 2480, 2633
TspGWI ACGGA 1 cut(s) 2450
TspRI CASTG 8 cut(s) 556, 978, 1051, 1242, 2161, 2192, 2748, 3291
Van91I CCANNNNNTGG 3 cut(s) 181, 641, 1771
VpaK11BI GGWCC 7 cut(s) 69, 140, 692, 1634, 1695, 2440, 3490
XagI CCTNNNNNAGG 1 cut(s) 1886
XapI RAATTY 9 cut(s) 663, 729, 862, 932, 1640, 1753, 3033, 3332, 3379
XceI RCATGY 1 cut(s) 3253
XcmI CCANNNNNNNNNTGG 2 cut(s) 1500, 3242
XmnI GAANNNNTTC 2 cut(s) 1754, 2487
XspI CTAG 4 cut(s) 1256, 1784, 3189, 3501
ZrmI AGTACT 1 cut(s) 758
Zsp2I ATGCAT 1 cut(s) 2080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.