RING-like zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05545 |
| fragaria_vesca | FvH4_6g06620 FvH4_6g06620 FvH4_6g06620 FvH4_6g06620 FvH4_6g06620 |
| malus_domestica | MD04G1199600.v1.1 MD08G1111000.v1.1 MD12G1212400.v1.1 |
| prunus_persica | Prupe.6G320100_v2.0.a1 Prupe.6G320100_v2.0.a1 |
| pyrus_communis | pycom04g17630 pycom12g19860 |
| rosa_chinensis | RchiOBHm_Chr3g0455821 |
| rosa_laevigata | RLG00000025329 |
| rosa_multiflora | Rmu_ssc0000046.1_g000008 Rmu_ssc0000046.1_g000018 |
| rosa_roxburghii | Rroxscaffold_6G00423430 Rroxscaffold_6G00423930 |
| rosa_rugosa | Rorug03G0010900 Rorug03G0011000 |
| rosa_samantha | Rh3AG069800 Rh3BG072400 Rh3CG070600 Rh3DG073100 |
| rosa_wichuraiana | Rw3G005670 Rw3G006020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 722 |
| AccI | GTMKAC | 1 cut(s) | 1176 |
| AccII | CGCG | 1 cut(s) | 897 |
| AccIII | TCCGGA | 1 cut(s) | 286 |
| AciI | CCGC | 6 cut(s) | 48, 60, 84, 686, 895, 996 |
| AclWI | GGATC | 4 cut(s) | 330, 660, 802, 984 |
| AcoI | YGGCCR | 1 cut(s) | 1230 |
| AcsI | RAATTY | 1 cut(s) | 290 |
| AcuI | CTGAAG | 2 cut(s) | 720, 899 |
| AcyI | GRCGYC | 1 cut(s) | 723 |
| AfaI | GTAC | 2 cut(s) | 612, 964 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 132, 791, 875, 1239 |
| AgeI | ACCGGT | 1 cut(s) | 1290 |
| AgsI | TTSAA | 3 cut(s) | 116, 202, 586 |
| AjnI | CCWGG | 3 cut(s) | 729, 874, 976 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 339, 371, 523, 555 |
| Alw21I | GWGCWC | 1 cut(s) | 366 |
| Alw44I | GTGCAC | 1 cut(s) | 362 |
| AlwI | GGATC | 4 cut(s) | 330, 660, 802, 984 |
| Aor13HI | TCCGGA | 1 cut(s) | 286 |
| AoxI | GGCC | 6 cut(s) | 147, 527, 767, 891, 1022, 1230 |
| ApaI | GGGCCC | 1 cut(s) | 895 |
| ApaLI | GTGCAC | 1 cut(s) | 362 |
| ApeKI | GCWGC | 5 cut(s) | 154, 600, 840, 879, 1245 |
| ApoI | RAATTY | 1 cut(s) | 290 |
| AsiGI | ACCGGT | 1 cut(s) | 1290 |
| AspLEI | GCGC | 2 cut(s) | 725, 776 |
| AspS9I | GGNCC | 6 cut(s) | 147, 527, 891, 892, 1022, 1266 |
| AsuC2I | CCSGG | 1 cut(s) | 985 |
| AsuHPI | GGTGA | 3 cut(s) | 417, 527, 942 |
| AvaII | GGWCC | 1 cut(s) | 1266 |
| BaeGI | GKGCMC | 2 cut(s) | 366, 895 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 468, 501, 594, 627 |
| BanI | GGYRCC | 1 cut(s) | 722 |
| BanII | GRGCYC | 3 cut(s) | 9, 895, 985 |
| BauI | CACGAG | 1 cut(s) | 79 |
| Bbv12I | GWGCWC | 1 cut(s) | 366 |
| BbvI | GCAGC | 5 cut(s) | 141, 612, 852, 891, 1257 |
| BccI | CCATC | 7 cut(s) | 38, 50, 439, 507, 597, 751, 1241 |
| BceAI | ACGGC | 1 cut(s) | 261 |
| BciT130I | CCWGG | 3 cut(s) | 731, 876, 978 |
| BcnI | CCSGG | 1 cut(s) | 985 |
| BfaI | CTAG | 5 cut(s) | 179, 615, 765, 831, 942 |
| BfoI | RGCGCY | 1 cut(s) | 726 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 731 |
| BglII | AGATCT | 2 cut(s) | 140, 758 |
| BisI | GCNGC | 5 cut(s) | 155, 601, 841, 880, 1246 |
| BlpI | GCTNAGC | 2 cut(s) | 385, 471 |
| BlsI | GCNGC | 5 cut(s) | 156, 602, 842, 881, 1247 |
| Bme1390I | CCNGG | 4 cut(s) | 731, 876, 978, 985 |
| Bme18I | GGWCC | 1 cut(s) | 1266 |
| BmgT120I | GGNCC | 6 cut(s) | 147, 527, 891, 892, 1022, 1266 |
| BmiI | GGNNCC | 4 cut(s) | 724, 893, 982, 1267 |
| BmrFI | CCNGG | 4 cut(s) | 731, 876, 978, 985 |
| BmsI | GCATC | 4 cut(s) | 175, 263, 685, 814 |
| BpmI | CTGGAG | 1 cut(s) | 538 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 385, 471 |
| BpuEI | CTTGAG | 1 cut(s) | 999 |
| BpuMI | CCSGG | 1 cut(s) | 985 |
| BsaBI | GATNNNNATC | 2 cut(s) | 321, 793 |
| BsaHI | GRCGYC | 1 cut(s) | 723 |
| BsaJI | CCNNGG | 4 cut(s) | 523, 648, 1133, 1207 |
| BsaWI | WCCGGW | 3 cut(s) | 286, 1073, 1290 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 78, 108 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 132, 791, 875, 1239 |
| Bse118I | RCCGGY | 1 cut(s) | 1290 |
| Bse1I | ACTGG | 4 cut(s) | 311, 371, 555, 1025 |
| Bse3DI | GCAATG | 4 cut(s) | 164, 222, 227, 889 |
| Bse8I | GATNNNNATC | 2 cut(s) | 321, 793 |
| BseAI | TCCGGA | 1 cut(s) | 286 |
| BseBI | CCWGG | 3 cut(s) | 731, 876, 978 |
| BseDI | CCNNGG | 4 cut(s) | 523, 648, 1133, 1207 |
| BseGI | GGATG | 7 cut(s) | 278, 307, 499, 542, 805, 1129, 1277 |
| BseJI | GATNNNNATC | 2 cut(s) | 321, 793 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 132, 791, 875, 1239 |
| BseMI | GCAATG | 4 cut(s) | 164, 222, 227, 889 |
| BseMII | CTCAG | 2 cut(s) | 462, 858 |
| BseNI | ACTGG | 4 cut(s) | 311, 371, 555, 1025 |
| BseSI | GKGCMC | 2 cut(s) | 366, 895 |
| BseXI | GCAGC | 5 cut(s) | 141, 612, 852, 891, 1257 |
| Bsh1236I | CGCG | 1 cut(s) | 897 |
| BshFI | GGCC | 6 cut(s) | 149, 529, 769, 893, 1024, 1232 |
| BshNI | GGYRCC | 1 cut(s) | 722 |
| BshTI | ACCGGT | 1 cut(s) | 1290 |
| BsiHKAI | GWGCWC | 1 cut(s) | 366 |
| BsiSI | CCGG | 5 cut(s) | 287, 985, 1074, 1252, 1291 |
| BsiWI | CGTACG | 1 cut(s) | 962 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 132, 791, 875, 1239 |
| BsnI | GGCC | 6 cut(s) | 149, 529, 769, 893, 1024, 1232 |
| Bsp120I | GGGCCC | 1 cut(s) | 891 |
| Bsp1286I | GDGCHC | 4 cut(s) | 9, 366, 895, 985 |
| Bsp13I | TCCGGA | 1 cut(s) | 286 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 385, 471 |
| Bsp19I | CCATGG | 2 cut(s) | 648, 1133 |
| BspACI | CCGC | 6 cut(s) | 48, 60, 84, 686, 895, 996 |
| BspANI | GGCC | 6 cut(s) | 149, 529, 769, 893, 1024, 1232 |
| BspCNI | CTCAG | 2 cut(s) | 463, 857 |
| BspEI | TCCGGA | 1 cut(s) | 286 |
| BspFNI | CGCG | 1 cut(s) | 897 |
| BspHI | TCATGA | 1 cut(s) | 439 |
| BspLI | GGNNCC | 4 cut(s) | 724, 893, 982, 1267 |
| BspPI | GGATC | 4 cut(s) | 330, 660, 802, 984 |
| BspQI | GCTCTTC | 1 cut(s) | 918 |
| BspT107I | GGYRCC | 1 cut(s) | 722 |
| BsrDI | GCAATG | 4 cut(s) | 164, 222, 227, 889 |
| BsrFI | RCCGGY | 1 cut(s) | 1290 |
| BsrI | ACTGG | 4 cut(s) | 311, 371, 555, 1025 |
| BssAI | RCCGGY | 1 cut(s) | 1290 |
| BssECI | CCNNGG | 4 cut(s) | 523, 648, 1133, 1207 |
| BssNI | GRCGYC | 1 cut(s) | 723 |
| BssSI | CACGAG | 1 cut(s) | 79 |
| BssT1I | CCWWGG | 4 cut(s) | 523, 648, 1133, 1207 |
| Bst2BI | CACGAG | 1 cut(s) | 79 |
| Bst2UI | CCWGG | 3 cut(s) | 731, 876, 978 |
| Bst4CI | ACNGT | 2 cut(s) | 668, 827 |
| Bst6I | CTCTTC | 2 cut(s) | 15, 918 |
| BstACI | GRCGYC | 1 cut(s) | 723 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 4 cut(s) | 459, 721, 838, 895 |
| BstDEI | CTNAG | 3 cut(s) | 385, 471, 844 |
| BstDSI | CCRYGG | 2 cut(s) | 648, 1133 |
| BstF5I | GGATG | 7 cut(s) | 278, 307, 499, 542, 805, 1129, 1277 |
| BstFNI | CGCG | 1 cut(s) | 897 |
| BstH2I | RGCGCY | 1 cut(s) | 726 |
| BstHHI | GCGC | 2 cut(s) | 725, 776 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 81, 108, 163, 467, 644, 731, 917 |
| BstNI | CCWGG | 3 cut(s) | 731, 876, 978 |
| BstNSI | RCATGY | 2 cut(s) | 461, 1153 |
| BstSCI | CCNGG | 4 cut(s) | 729, 874, 976, 983 |
| BstSLI | GKGCMC | 2 cut(s) | 366, 895 |
| BstUI | CGCG | 1 cut(s) | 897 |
| BstV1I | GCAGC | 5 cut(s) | 141, 612, 852, 891, 1257 |
| BstX2I | RGATCY | 6 cut(s) | 140, 322, 652, 758, 794, 989 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1052 |
| BstYI | RGATCY | 6 cut(s) | 140, 322, 652, 758, 794, 989 |
| BsuRI | GGCC | 6 cut(s) | 149, 529, 769, 893, 1024, 1232 |
| BtgI | CCRYGG | 2 cut(s) | 648, 1133 |
| BtgZI | GCGATG | 2 cut(s) | 57, 69 |
| BtsCI | GGATG | 7 cut(s) | 278, 307, 499, 542, 805, 1129, 1277 |
| BtsI | GCAGTG | 2 cut(s) | 19, 1222 |
| BtsIMutI | CAGTG | 6 cut(s) | 19, 364, 562, 832, 1032, 1222 |
| Cac8I | GCNNGC | 4 cut(s) | 459, 721, 838, 895 |
| CciI | TCATGA | 1 cut(s) | 439 |
| CfoI | GCGC | 2 cut(s) | 725, 776 |
| Cfr10I | RCCGGY | 1 cut(s) | 1290 |
| Cfr13I | GGNCC | 6 cut(s) | 147, 527, 891, 892, 1022, 1266 |
| Csp6I | GTAC | 2 cut(s) | 611, 963 |
| CspAI | ACCGGT | 1 cut(s) | 1290 |
| CviAII | CATG | 9 cut(s) | 298, 314, 440, 458, 649, 958, 1134, 1150, 1262 |
| CviQI | GTAC | 2 cut(s) | 611, 963 |
| DdeI | CTNAG | 3 cut(s) | 385, 471, 844 |
| DinI | GGCGCC | 1 cut(s) | 724 |
| EaeI | YGGCCR | 1 cut(s) | 1230 |
| Eam1104I | CTCTTC | 2 cut(s) | 15, 918 |
| EarI | CTCTTC | 2 cut(s) | 15, 918 |
| Eco130I | CCWWGG | 4 cut(s) | 523, 648, 1133, 1207 |
| Eco24I | GRGCYC | 3 cut(s) | 9, 895, 985 |
| Eco47I | GGWCC | 1 cut(s) | 1266 |
| Eco57I | CTGAAG | 2 cut(s) | 720, 899 |
| EcoRII | CCWGG | 3 cut(s) | 729, 874, 976 |
| EcoT14I | CCWWGG | 4 cut(s) | 523, 648, 1133, 1207 |
| EcoT22I | ATGCAT | 1 cut(s) | 807 |
| EcoT38I | GRGCYC | 3 cut(s) | 9, 895, 985 |
| EgeI | GGCGCC | 1 cut(s) | 724 |
| EheI | GGCGCC | 1 cut(s) | 724 |
| ErhI | CCWWGG | 4 cut(s) | 523, 648, 1133, 1207 |
| FaeI | CATG | 9 cut(s) | 301, 317, 443, 461, 652, 961, 1137, 1153, 1265 |
| FatI | CATG | 9 cut(s) | 297, 313, 439, 457, 648, 957, 1133, 1149, 1261 |
| FauI | CCCGC | 2 cut(s) | 693, 902 |
| FblI | GTMKAC | 1 cut(s) | 1176 |
| Fnu4HI | GCNGC | 5 cut(s) | 155, 601, 841, 880, 1246 |
| FokI | GGATG | 7 cut(s) | 285, 314, 486, 529, 792, 1116, 1264 |
| FriOI | GRGCYC | 3 cut(s) | 9, 895, 985 |
| Fsp4HI | GCNGC | 5 cut(s) | 155, 601, 841, 880, 1246 |
| FspBI | CTAG | 5 cut(s) | 179, 615, 765, 831, 942 |
| GlaI | GCGC | 2 cut(s) | 724, 775 |
| GluI | GCNGC | 5 cut(s) | 155, 601, 841, 880, 1246 |
| GsuI | CTGGAG | 1 cut(s) | 538 |
| HaeII | RGCGCY | 1 cut(s) | 726 |
| HaeIII | GGCC | 6 cut(s) | 149, 529, 769, 893, 1024, 1232 |
| HapII | CCGG | 5 cut(s) | 287, 985, 1074, 1252, 1291 |
| HhaI | GCGC | 2 cut(s) | 725, 776 |
| Hin1I | GRCGYC | 1 cut(s) | 723 |
| Hin1II | CATG | 9 cut(s) | 301, 317, 443, 461, 652, 961, 1137, 1153, 1265 |
| Hin6I | GCGC | 2 cut(s) | 723, 774 |
| HinP1I | GCGC | 2 cut(s) | 723, 774 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HindIII | AAGCTT | 1 cut(s) | 573 |
| HinfI | GANTC | 4 cut(s) | 862, 903, 1168, 1226 |
| HpaII | CCGG | 5 cut(s) | 287, 985, 1074, 1252, 1291 |
| HphI | GGTGA | 3 cut(s) | 417, 527, 942 |
| Hpy166II | GTNNAC | 3 cut(s) | 34, 364, 1177 |
| Hpy188I | TCNGA | 7 cut(s) | 237, 346, 571, 1042, 1225, 1238, 1270 |
| Hpy188III | TCNNGA | 5 cut(s) | 179, 287, 440, 792, 1162 |
| Hpy8I | GTNNAC | 3 cut(s) | 34, 364, 1177 |
| Hpy99I | CGWCG | 2 cut(s) | 125, 859 |
| HpyAV | CCTTC | 4 cut(s) | 208, 407, 549, 1164 |
| HpyCH4III | ACNGT | 2 cut(s) | 668, 827 |
| HpyCH4V | TGCA | 6 cut(s) | 157, 186, 220, 364, 805, 887 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 81, 108, 163, 467, 644, 731, 917 |
| HpyF3I | CTNAG | 3 cut(s) | 385, 471, 844 |
| Hsp92I | GRCGYC | 1 cut(s) | 723 |
| Hsp92II | CATG | 9 cut(s) | 301, 317, 443, 461, 652, 961, 1137, 1153, 1265 |
| HspAI | GCGC | 2 cut(s) | 723, 774 |
| KasI | GGCGCC | 1 cut(s) | 722 |
| Kpn2I | TCCGGA | 1 cut(s) | 286 |
| LguI | GCTCTTC | 1 cut(s) | 918 |
| LmnI | GCTCC | 4 cut(s) | 597, 673, 980, 1242 |
| Lsp1109I | GCAGC | 5 cut(s) | 141, 612, 852, 891, 1257 |
| LweI | GCATC | 4 cut(s) | 175, 263, 685, 814 |
| MaeI | CTAG | 5 cut(s) | 179, 615, 765, 831, 942 |
| MaeIII | GTNAC | 4 cut(s) | 748, 821, 847, 1088 |
| MboII | GAAGA | 4 cut(s) | 32, 457, 647, 905 |
| MflI | RGATCY | 6 cut(s) | 140, 322, 652, 758, 794, 989 |
| MhlI | GDGCHC | 4 cut(s) | 9, 366, 895, 985 |
| MluCI | AATT | 7 cut(s) | 170, 229, 240, 290, 443, 531, 946 |
| Mly113I | GGCGCC | 1 cut(s) | 723 |
| MlyI | GAGTC | 2 cut(s) | 912, 1220 |
| MmeI | TCCRAC | 2 cut(s) | 215, 603 |
| Mph1103I | ATGCAT | 1 cut(s) | 807 |
| MroI | TCCGGA | 1 cut(s) | 286 |
| MseI | TTAA | 2 cut(s) | 335, 1203 |
| MspA1I | CMGCKG | 2 cut(s) | 482, 996 |
| MspI | CCGG | 5 cut(s) | 287, 985, 1074, 1252, 1291 |
| MspR9I | CCNGG | 4 cut(s) | 731, 876, 978, 985 |
| MvaI | CCWGG | 3 cut(s) | 731, 876, 978 |
| MvnI | CGCG | 1 cut(s) | 897 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 81, 108, 163, 467, 644, 731, 917 |
| NarI | GGCGCC | 1 cut(s) | 723 |
| NciI | CCSGG | 1 cut(s) | 985 |
| NcoI | CCATGG | 2 cut(s) | 648, 1133 |
| NlaIII | CATG | 9 cut(s) | 301, 317, 443, 461, 652, 961, 1137, 1153, 1265 |
| NlaIV | GGNNCC | 4 cut(s) | 724, 893, 982, 1267 |
| NmeAIII | GCCGAG | 2 cut(s) | 795, 1208 |
| NmuCI | GTSAC | 2 cut(s) | 821, 847 |
| NsiI | ATGCAT | 1 cut(s) | 807 |
| NspI | RCATGY | 2 cut(s) | 461, 1153 |
| PaeI | GCATGC | 1 cut(s) | 461 |
| PagI | TCATGA | 1 cut(s) | 439 |
| PciSI | GCTCTTC | 1 cut(s) | 918 |
| PfeI | GAWTC | 2 cut(s) | 862, 1168 |
| Pfl23II | CGTACG | 1 cut(s) | 962 |
| PflFI | GACNNNGTC | 1 cut(s) | 902 |
| PfoI | TCCNGGA | 1 cut(s) | 976 |
| PinAI | ACCGGT | 1 cut(s) | 1290 |
| PkrI | GCNGC | 5 cut(s) | 156, 602, 842, 881, 1247 |
| PleI | GAGTC | 2 cut(s) | 911, 1220 |
| PluTI | GGCGCC | 1 cut(s) | 726 |
| PpsI | GAGTC | 2 cut(s) | 911, 1220 |
| Psp6I | CCWGG | 3 cut(s) | 729, 874, 976 |
| PspGI | CCWGG | 3 cut(s) | 729, 874, 976 |
| PspLI | CGTACG | 1 cut(s) | 962 |
| PspN4I | GGNNCC | 4 cut(s) | 724, 893, 982, 1267 |
| PspOMI | GGGCCC | 1 cut(s) | 891 |
| PspPI | GGNCC | 6 cut(s) | 147, 527, 891, 892, 1022, 1266 |
| PsuI | RGATCY | 6 cut(s) | 140, 322, 652, 758, 794, 989 |
| PsyI | GACNNNGTC | 1 cut(s) | 902 |
| PvuII | CAGCTG | 1 cut(s) | 482 |
| RsaI | GTAC | 2 cut(s) | 612, 964 |
| RsaNI | GTAC | 2 cut(s) | 611, 963 |
| SapI | GCTCTTC | 1 cut(s) | 918 |
| SaqAI | TTAA | 2 cut(s) | 335, 1203 |
| SatI | GCNGC | 5 cut(s) | 155, 601, 841, 880, 1246 |
| Sau96I | GGNCC | 6 cut(s) | 147, 527, 891, 892, 1022, 1266 |
| SchI | GAGTC | 2 cut(s) | 912, 1220 |
| ScrFI | CCNGG | 4 cut(s) | 731, 876, 978, 985 |
| SduI | GDGCHC | 4 cut(s) | 9, 366, 895, 985 |
| SfaNI | GCATC | 4 cut(s) | 175, 263, 685, 814 |
| SfoI | GGCGCC | 1 cut(s) | 724 |
| SinI | GGWCC | 1 cut(s) | 1266 |
| SmlI | CTYRAG | 1 cut(s) | 1014 |
| SmoI | CTYRAG | 1 cut(s) | 1014 |
| SphI | GCATGC | 1 cut(s) | 461 |
| Sse9I | AATT | 7 cut(s) | 170, 229, 240, 290, 443, 531, 946 |
| SsiI | CCGC | 6 cut(s) | 48, 60, 84, 686, 895, 996 |
| SspDI | GGCGCC | 1 cut(s) | 722 |
| SspMI | CTAG | 5 cut(s) | 179, 615, 765, 831, 942 |
| StyD4I | CCNGG | 4 cut(s) | 729, 874, 976, 983 |
| StyI | CCWWGG | 4 cut(s) | 523, 648, 1133, 1207 |
| TaaI | ACNGT | 2 cut(s) | 668, 827 |
| TaqI | TCGA | 3 cut(s) | 104, 857, 1163 |
| TaqII | GACCGA | 2 cut(s) | 809, 1194 |
| TasI | AATT | 7 cut(s) | 170, 229, 240, 290, 443, 531, 946 |
| TfiI | GAWTC | 2 cut(s) | 862, 1168 |
| Tru1I | TTAA | 2 cut(s) | 335, 1203 |
| Tru9I | TTAA | 2 cut(s) | 335, 1203 |
| TscAI | CASTG | 6 cut(s) | 19, 371, 562, 832, 1032, 1222 |
| TseFI | GTSAC | 2 cut(s) | 821, 847 |
| TseI | GCWGC | 5 cut(s) | 154, 600, 840, 879, 1245 |
| Tsp45I | GTSAC | 2 cut(s) | 821, 847 |
| TspGWI | ACGGA | 1 cut(s) | 1101 |
| TspRI | CASTG | 6 cut(s) | 19, 371, 562, 832, 1032, 1222 |
| Tth111I | GACNNNGTC | 1 cut(s) | 902 |
| VneI | GTGCAC | 1 cut(s) | 362 |
| VpaK11BI | GGWCC | 1 cut(s) | 1266 |
| XapI | RAATTY | 1 cut(s) | 290 |
| XbaI | TCTAGA | 1 cut(s) | 178 |
| XceI | RCATGY | 2 cut(s) | 461, 1153 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1214 |
| XmiI | GTMKAC | 1 cut(s) | 1176 |
| XspI | CTAG | 5 cut(s) | 179, 615, 765, 831, 942 |
| Zsp2I | ATGCAT | 1 cut(s) | 807 |