pycom04g20490
MYB Family

PHR1-LIKE 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
21979482 .. 21982156
2675 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g20490.6

Sequence Viewer

Length: 1383 bp
ATGAGTGAATTTGGGGCTTCCAAAGCTATGTCTTCATCATTTCCGCGTCTCCATACCCCCCTAGACGACAAATATTCCAATTTGCCGGATTCTTTTCAGGTTTCATCACAAAGGGAGAAGAGTATATACTCTATGCAACAGCAGGCTTCTTCCCCTGGGAACTTATTTCCATCAGCTTCTAGGCCCAATGAGATTCATATTTCTTCAGTTCCCCCTTGTGAACAGCGTTCCCAAAACTCTCCTTTCATTTGTAAATCACCAGTTGACGGAAAGTCATTGTCACTGCACCGTTCTTCCCATTCTCCCCATTTAGAAGTGCAACCGACAGCTTTGATTAATTACCCTGAAGAAAATAAAGATATTTCTTGGTGCCCAGATTCACTTCAGGATTTTCTTCACTTCTCTGAAAGTGTCCCTGACCAGAATGGCCTGGTGGATAGTAGTGCCGGTGTCATAACATCTGAGGAACATGCTGGAAAGACCAATTGGTCTGATTGGGATCCATTAATTTCATTTGATGACGCTCTGGACCCAAATTGGGAGCTTCCGGTTGATGTTGATAGAATGGATCCTAAACCGAAGCAGCCCCAGATTCAACAACATCCTCCCCAGATGCAACAATATCAGCTCCAGATTCAACAACATCAGCCCCAGATTCAACAGCATCAGTCGGTGCAAGCTGTAGACTTTCGTCCTAGTCCTGAACCATTGTCCAGTGCTCCTCCAACGAAATCCAGAATGCGTTGGACTCAAGAACTTCATGAGGCCTTTGTGGAAGCTGTCAACCATCTTGGTGGTAGTGAACGAGCCACTCCTAAGGGTATTGTAAACCTCATGAAAGTTGAAGGATTGACAATCTATCATGTAAAAAGCCATTTACAGAAATATAGAACAGCAAGATACAAACCGGAGTCATCAGAAGTACCATGTGAGAAAGTTTCAACTCCAGTGGAAGAAACAAATCCTCTAGACGTGAAAGGGAGCATGGGTATTACTGAAGCATTGCGGTTGCAGGTGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGAACCAAAGAAAGCTGCAGTTGAAAATTGAAGAACAAGGGAAGTACCTTGAGAAGATGTTTGAGCAACAGAGAAAAATAGAAGACAACAGGGTCAAGTCCGGATCATCCACCGTGGATGACCACCCTACTGCGCTATCAGACATTGCGTGTCCTTCCACTGGAGGGGATAAACAAGAAACCTCTACACATCAGCATGATAAAACAGTGATCAGAATCCCCTTAGAAGATGGTACACAAGATGCAAGTCGGGAGGCACAAGAACCTGAATGTCCCGAGGATCCAGATGGCGTCGAGTCTGGTGCTCCGCCCACAAAACGAGCCAGGAATGGATAA

Protein Analysis

461

Amino Acids

51.69

Weight (kDa)

5.42

Isoelectric Point (pI)

60.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1003
AasI GACNNNNNNGTC 2 cut(s) 487, 1139
Acc36I ACCTGC 1 cut(s) 1003
AccB1I GGYRCC 1 cut(s) 369
AccI GTMKAC 1 cut(s) 684
AccII CGCG 1 cut(s) 46
AccIII TCCGGA 1 cut(s) 1148
AciI CCGC 4 cut(s) 44, 1006, 1030, 1355
AclWI GGATC 7 cut(s) 494, 507, 563, 576, 1159, 1322, 1335
AcsI RAATTY 1 cut(s) 8
AcuI CTGAAG 4 cut(s) 189, 366, 368, 1017
AcyI GRCGYC 1 cut(s) 1338
AfaI GTAC 3 cut(s) 924, 1094, 1282
AfiI CCNNNNNNNGG 4 cut(s) 266, 538, 1208, 1212
AgsI TTSAA 7 cut(s) 596, 638, 659, 845, 942, 1072, 1079
AhdI GACNNNNNGTC 1 cut(s) 271
AjiI CACGTC 1 cut(s) 973
AjnI CCWGG 3 cut(s) 154, 429, 1370
AjuI GAANNNNNNNTTGG 2 cut(s) 469, 501
AluBI AGCT 8 cut(s) 26, 176, 329, 544, 628, 680, 779, 1063
AluI AGCT 8 cut(s) 26, 176, 329, 544, 628, 680, 779, 1063
Alw21I GWGCWC 2 cut(s) 721, 1354
Alw26I GTCTC 1 cut(s) 53
AlwI GGATC 7 cut(s) 494, 507, 563, 576, 1159, 1322, 1335
Ama87I CYCGRG 1 cut(s) 1322
Aor13HI TCCGGA 1 cut(s) 1148
AoxI GGCC 3 cut(s) 182, 427, 765
ApeKI GCWGC 2 cut(s) 583, 1063
ApoI RAATTY 1 cut(s) 8
AseI ATTAAT 2 cut(s) 336, 506
AspLEI GCGC 1 cut(s) 1183
AspS9I GGNCC 2 cut(s) 183, 529
AsuHPI GGTGA 1 cut(s) 249
AvaI CYCGRG 1 cut(s) 1322
AvaII GGWCC 1 cut(s) 529
AxyI CCTNAGG 1 cut(s) 816
BaeGI GKGCMC 1 cut(s) 374
BamHI GGATCC 3 cut(s) 499, 568, 1327
BanI GGYRCC 1 cut(s) 369
BarI GAAGNNNNNNTAC 2 cut(s) 110, 142
BbsI GAAGAC 2 cut(s) 24, 1137
Bbv12I GWGCWC 2 cut(s) 721, 1354
BbvI GCAGC 2 cut(s) 595, 1050
BccI CCATC 4 cut(s) 178, 795, 1271, 1328
BcgI CGANNNNNNTGC 2 cut(s) 1331, 1365
BciT130I CCWGG 3 cut(s) 156, 431, 1372
BclI TGATCA 1 cut(s) 1257
BcoDI GTCTC 1 cut(s) 53
BfaI CTAG 4 cut(s) 62, 180, 696, 968
BfmI CTRYAG 2 cut(s) 681, 1064
BfuAI ACCTGC 1 cut(s) 1003
BisI GCNGC 3 cut(s) 584, 1031, 1064
BlsI GCNGC 3 cut(s) 585, 1032, 1065
Bme1390I CCNGG 3 cut(s) 156, 431, 1372
Bme18I GGWCC 1 cut(s) 529
BmeRI GACNNNNNGTC 1 cut(s) 271
BmeT110I CYCGRG 1 cut(s) 1322
BmgBI CACGTC 1 cut(s) 973
BmgT120I GGNCC 2 cut(s) 183, 529
BmiI GGNNCC 5 cut(s) 371, 501, 531, 570, 1329
BmrFI CCNGG 3 cut(s) 156, 431, 1372
BmsI GCATC 3 cut(s) 603, 673, 1279
BoxI GACNNNNGTC 1 cut(s) 690
BpiI GAAGAC 2 cut(s) 24, 1137
BpmI CTGGAG 4 cut(s) 614, 930, 1007, 1230
BpuEI CTTGAG 3 cut(s) 735, 1067, 1118
BsaBI GATNNNNATC 2 cut(s) 498, 1262
BsaHI GRCGYC 1 cut(s) 1338
BsaJI CCNNGG 4 cut(s) 154, 155, 1161, 1323
BsaWI WCCGGW 3 cut(s) 547, 907, 1148
BsaXI ACNNNNNCTCC 2 cut(s) 973, 1003
Bsc4I CCNNNNNNNGG 4 cut(s) 266, 538, 1208, 1212
Bse118I RCCGGY 1 cut(s) 446
Bse1I ACTGG 4 cut(s) 260, 714, 947, 1213
Bse21I CCTNAGG 1 cut(s) 816
Bse3DI GCAATG 2 cut(s) 1001, 1191
Bse8I GATNNNNATC 2 cut(s) 498, 1262
BseAI TCCGGA 1 cut(s) 1148
BseBI CCWGG 3 cut(s) 156, 431, 1372
BseDI CCNNGG 4 cut(s) 154, 155, 1161, 1323
BseGI GGATG 3 cut(s) 601, 1154, 1171
BseJI GATNNNNATC 2 cut(s) 498, 1262
BseLI CCNNNNNNNGG 4 cut(s) 266, 538, 1208, 1212
BseMI GCAATG 2 cut(s) 1001, 1191
BseMII CTCAG 1 cut(s) 453
BseNI ACTGG 4 cut(s) 260, 714, 947, 1213
BseRI GAGGAG 1 cut(s) 711
BseSI GKGCMC 1 cut(s) 374
BseXI GCAGC 2 cut(s) 595, 1050
BsgI GTGCAG 1 cut(s) 269
Bsh1236I CGCG 1 cut(s) 46
BshFI GGCC 3 cut(s) 184, 429, 767
BshNI GGYRCC 1 cut(s) 369
BsiHKAI GWGCWC 2 cut(s) 721, 1354
BsiHKCI CYCGRG 1 cut(s) 1322
BsiSI CCGG 5 cut(s) 86, 447, 548, 908, 1149
BslFI GGGAC 2 cut(s) 398, 1305
BslI CCNNNNNNNGG 4 cut(s) 266, 538, 1208, 1212
BsmAI GTCTC 1 cut(s) 53
BsmBI CGTCTC 1 cut(s) 53
BsmFI GGGAC 2 cut(s) 398, 1305
BsmI GAATGC 1 cut(s) 744
BsnI GGCC 3 cut(s) 184, 429, 767
BsoBI CYCGRG 1 cut(s) 1322
Bsp1286I GDGCHC 3 cut(s) 374, 721, 1354
Bsp13I TCCGGA 1 cut(s) 1148
Bsp143I GATC 5 cut(s) 499, 568, 1151, 1257, 1327
BspACI CCGC 4 cut(s) 44, 1006, 1030, 1355
BspANI GGCC 3 cut(s) 184, 429, 767
BspCNI CTCAG 1 cut(s) 454
BspEI TCCGGA 1 cut(s) 1148
BspFNI CGCG 1 cut(s) 46
BspHI TCATGA 3 cut(s) 760, 834, 1036
BspLI GGNNCC 5 cut(s) 371, 501, 531, 570, 1329
BspMAI CTGCAG 1 cut(s) 1068
BspMI ACCTGC 1 cut(s) 1003
BspPI GGATC 7 cut(s) 494, 507, 563, 576, 1159, 1322, 1335
BspT107I GGYRCC 1 cut(s) 369
BsrDI GCAATG 2 cut(s) 1001, 1191
BsrFI RCCGGY 1 cut(s) 446
BsrI ACTGG 4 cut(s) 260, 714, 947, 1213
BssAI RCCGGY 1 cut(s) 446
BssECI CCNNGG 4 cut(s) 154, 155, 1161, 1323
BssMI GATC 5 cut(s) 499, 568, 1151, 1257, 1327
BssNI GRCGYC 1 cut(s) 1338
Bst2UI CCWGG 3 cut(s) 156, 431, 1372
Bst4CI ACNGT 3 cut(s) 290, 1162, 1255
Bst6I CTCTTC 1 cut(s) 113
BstACI GRCGYC 1 cut(s) 1338
BstC8I GCNNGC 2 cut(s) 144, 678
BstDEI CTNAG 3 cut(s) 462, 816, 1270
BstDSI CCRYGG 1 cut(s) 1161
BstF5I GGATG 3 cut(s) 601, 1154, 1171
BstFNI CGCG 1 cut(s) 46
BstHHI GCGC 1 cut(s) 1183
BstKTI GATC 5 cut(s) 502, 571, 1154, 1260, 1330
BstMAI GTCTC 1 cut(s) 53
BstMBI GATC 5 cut(s) 499, 568, 1151, 1257, 1327
BstMWI GCNNNNNNNGC 1 cut(s) 23
BstNI CCWGG 3 cut(s) 156, 431, 1372
BstNSI RCATGY 1 cut(s) 473
BstPAI GACNNNNGTC 1 cut(s) 690
BstSCI CCNGG 3 cut(s) 154, 429, 1370
BstSFI CTRYAG 2 cut(s) 681, 1064
BstSLI GKGCMC 1 cut(s) 374
BstUI CGCG 1 cut(s) 46
BstV1I GCAGC 2 cut(s) 595, 1050
BstV2I GAAGAC 2 cut(s) 24, 1137
BstX2I RGATCY 3 cut(s) 499, 568, 1327
BstXI CCANNNNNNTGG 1 cut(s) 794
BstYI RGATCY 3 cut(s) 499, 568, 1327
Bsu36I CCTNAGG 1 cut(s) 816
BsuRI GGCC 3 cut(s) 184, 429, 767
BtgI CCRYGG 1 cut(s) 1161
BtrI CACGTC 1 cut(s) 973
BtsCI GGATG 3 cut(s) 601, 1154, 1171
BtsI GCAGTG 1 cut(s) 281
BtsIMutI CAGTG 5 cut(s) 281, 721, 954, 1206, 1260
BveI ACCTGC 1 cut(s) 1003
Cac8I GCNNGC 2 cut(s) 144, 678
CciI TCATGA 3 cut(s) 760, 834, 1036
CfoI GCGC 1 cut(s) 1183
Cfr10I RCCGGY 1 cut(s) 446
Cfr13I GGNCC 2 cut(s) 183, 529
CseI GACGC 3 cut(s) 35, 530, 1327
Csp6I GTAC 3 cut(s) 923, 1093, 1281
CspCI CAANNNNNGTGG 2 cut(s) 930, 965
CviAII CATG 8 cut(s) 470, 761, 835, 863, 927, 985, 1037, 1244
CviQI GTAC 3 cut(s) 923, 1093, 1281
DdeI CTNAG 3 cut(s) 462, 816, 1270
DpnI GATC 5 cut(s) 501, 570, 1153, 1259, 1329
DpnII GATC 5 cut(s) 499, 568, 1151, 1257, 1327
DrdI GACNNNNNNGTC 2 cut(s) 487, 1139
DriI GACNNNNNGTC 1 cut(s) 271
DseDI GACNNNNNNGTC 2 cut(s) 487, 1139
Eam1104I CTCTTC 1 cut(s) 113
Eam1105I GACNNNNNGTC 1 cut(s) 271
EarI CTCTTC 1 cut(s) 113
EciI GGCGGA 1 cut(s) 1344
Eco147I AGGCCT 1 cut(s) 767
Eco47I GGWCC 1 cut(s) 529
Eco57I CTGAAG 4 cut(s) 189, 366, 368, 1017
Eco81I CCTNAGG 1 cut(s) 816
Eco88I CYCGRG 1 cut(s) 1322
EcoRII CCWGG 3 cut(s) 154, 429, 1370
Esp3I CGTCTC 1 cut(s) 53
FaeI CATG 8 cut(s) 473, 764, 838, 866, 930, 988, 1040, 1247
FaqI GGGAC 2 cut(s) 398, 1305
FatI CATG 8 cut(s) 469, 760, 834, 862, 926, 984, 1036, 1243
FbaI TGATCA 1 cut(s) 1257
FblI GTMKAC 1 cut(s) 684
Fnu4HI GCNGC 3 cut(s) 584, 1031, 1064
FokI GGATG 3 cut(s) 588, 1141, 1178
Fsp4HI GCNGC 3 cut(s) 584, 1031, 1064
FspBI CTAG 4 cut(s) 62, 180, 696, 968
GlaI GCGC 1 cut(s) 1182
GluI GCNGC 3 cut(s) 584, 1031, 1064
GsuI CTGGAG 4 cut(s) 614, 930, 1007, 1230
HaeIII GGCC 3 cut(s) 184, 429, 767
HapII CCGG 5 cut(s) 86, 447, 548, 908, 1149
HgaI GACGC 3 cut(s) 35, 530, 1327
HhaI GCGC 1 cut(s) 1183
Hin1I GRCGYC 1 cut(s) 1338
Hin1II CATG 8 cut(s) 473, 764, 838, 866, 930, 988, 1040, 1247
Hin6I GCGC 1 cut(s) 1181
HinP1I GCGC 1 cut(s) 1181
HincII GTYRAC 2 cut(s) 265, 784
HindII GTYRAC 2 cut(s) 265, 784
HpaII CCGG 5 cut(s) 86, 447, 548, 908, 1149
HphI GGTGA 1 cut(s) 249
Hpy166II GTNNAC 7 cut(s) 221, 265, 685, 784, 803, 829, 1283
Hpy188I TCNGA 6 cut(s) 406, 463, 493, 919, 1189, 1262
Hpy8I GTNNAC 7 cut(s) 221, 265, 685, 784, 803, 829, 1283
Hpy99I CGWCG 1 cut(s) 1343
HpyAV CCTTC 2 cut(s) 839, 1212
HpyCH4III ACNGT 3 cut(s) 290, 1162, 1255
HpyCH4IV ACGT 1 cut(s) 972
HpyCH4V TGCA 8 cut(s) 136, 286, 319, 616, 676, 1012, 1066, 1292
HpyF10VI GCNNNNNNNGC 1 cut(s) 23
HpyF3I CTNAG 3 cut(s) 462, 816, 1270
HpySE526I ACGT 1 cut(s) 972
Hsp92I GRCGYC 1 cut(s) 1338
Hsp92II CATG 8 cut(s) 473, 764, 838, 866, 930, 988, 1040, 1247
HspAI GCGC 1 cut(s) 1181
Kpn2I TCCGGA 1 cut(s) 1148
Ksp22I TGATCA 1 cut(s) 1257
Kzo9I GATC 5 cut(s) 499, 568, 1151, 1257, 1327
LmnI GCTCC 5 cut(s) 541, 633, 724, 981, 1357
Lsp1109I GCAGC 2 cut(s) 595, 1050
LweI GCATC 3 cut(s) 603, 673, 1279
MaeI CTAG 4 cut(s) 62, 180, 696, 968
MaeII ACGT 1 cut(s) 972
MaeIII GTNAC 1 cut(s) 279
MalI GATC 5 cut(s) 501, 570, 1153, 1259, 1329
MboI GATC 5 cut(s) 499, 568, 1151, 1257, 1327
MfeI CAATTG 1 cut(s) 484
MflI RGATCY 3 cut(s) 499, 568, 1327
MhlI GDGCHC 3 cut(s) 374, 721, 1354
MluCI AATT 7 cut(s) 8, 79, 337, 484, 507, 535, 1074
MlyI GAGTC 3 cut(s) 742, 920, 1352
MmeI TCCRAC 2 cut(s) 725, 749
MroI TCCGGA 1 cut(s) 1148
MseI TTAA 2 cut(s) 336, 506
MslI CAYNNNNRTG 2 cut(s) 792, 1242
MspI CCGG 5 cut(s) 86, 447, 548, 908, 1149
MspR9I CCNGG 3 cut(s) 156, 431, 1372
MunI CAATTG 1 cut(s) 484
Mva1269I GAATGC 1 cut(s) 744
MvaI CCWGG 3 cut(s) 156, 431, 1372
MvnI CGCG 1 cut(s) 46
MwoI GCNNNNNNNGC 1 cut(s) 23
NdeII GATC 5 cut(s) 499, 568, 1151, 1257, 1327
NlaIII CATG 8 cut(s) 473, 764, 838, 866, 930, 988, 1040, 1247
NlaIV GGNNCC 5 cut(s) 371, 501, 531, 570, 1329
NmuCI GTSAC 1 cut(s) 279
NspI RCATGY 1 cut(s) 473
PagI TCATGA 3 cut(s) 760, 834, 1036
PaqCI CACCTGC 1 cut(s) 1003
PasI CCCWGGG 1 cut(s) 155
PceI AGGCCT 1 cut(s) 767
PctI GAATGC 1 cut(s) 744
PfeI GAWTC 7 cut(s) 89, 193, 377, 592, 634, 655, 1263
PkrI GCNGC 3 cut(s) 585, 1032, 1065
PleI GAGTC 3 cut(s) 742, 919, 1351
PpsI GAGTC 3 cut(s) 742, 919, 1351
PshAI GACNNNNGTC 1 cut(s) 690
PshBI ATTAAT 2 cut(s) 336, 506
Psp6I CCWGG 3 cut(s) 154, 429, 1370
PspGI CCWGG 3 cut(s) 154, 429, 1370
PspN4I GGNNCC 5 cut(s) 371, 501, 531, 570, 1329
PspPI GGNCC 2 cut(s) 183, 529
PstI CTGCAG 1 cut(s) 1068
PsuI RGATCY 3 cut(s) 499, 568, 1327
RsaI GTAC 3 cut(s) 924, 1094, 1282
RsaNI GTAC 3 cut(s) 923, 1093, 1281
RseI CAYNNNNRTG 2 cut(s) 792, 1242
SaqAI TTAA 2 cut(s) 336, 506
SatI GCNGC 3 cut(s) 584, 1031, 1064
Sau3AI GATC 5 cut(s) 499, 568, 1151, 1257, 1327
Sau96I GGNCC 2 cut(s) 183, 529
SchI GAGTC 3 cut(s) 742, 920, 1352
ScrFI CCNGG 3 cut(s) 156, 431, 1372
SduI GDGCHC 3 cut(s) 374, 721, 1354
SfaNI GCATC 3 cut(s) 603, 673, 1279
SfcI CTRYAG 2 cut(s) 681, 1064
SinI GGWCC 1 cut(s) 529
SmiMI CAYNNNNRTG 2 cut(s) 792, 1242
SmlI CTYRAG 3 cut(s) 750, 1046, 1097
SmoI CTYRAG 3 cut(s) 750, 1046, 1097
Sse9I AATT 7 cut(s) 8, 79, 337, 484, 507, 535, 1074
SseBI AGGCCT 1 cut(s) 767
SsiI CCGC 4 cut(s) 44, 1006, 1030, 1355
SspI AATATT 1 cut(s) 74
SspMI CTAG 4 cut(s) 62, 180, 696, 968
StuI AGGCCT 1 cut(s) 767
StyD4I CCNGG 3 cut(s) 154, 429, 1370
TaaI ACNGT 3 cut(s) 290, 1162, 1255
TaiI ACGT 1 cut(s) 975
TaqI TCGA 1 cut(s) 1341
TasI AATT 7 cut(s) 8, 79, 337, 484, 507, 535, 1074
TauI GCSGC 1 cut(s) 1033
TfiI GAWTC 7 cut(s) 89, 193, 377, 592, 634, 655, 1263
Tru1I TTAA 2 cut(s) 336, 506
Tru9I TTAA 2 cut(s) 336, 506
TscAI CASTG 5 cut(s) 288, 721, 954, 1213, 1260
TseFI GTSAC 1 cut(s) 279
TseI GCWGC 2 cut(s) 583, 1063
Tsp45I GTSAC 1 cut(s) 279
TspDTI ATGAA 9 cut(s) 24, 93, 185, 235, 501, 749, 851, 1025, 1053
TspGWI ACGGA 1 cut(s) 282
TspRI CASTG 5 cut(s) 288, 721, 954, 1213, 1260
VpaK11BI GGWCC 1 cut(s) 529
VspI ATTAAT 2 cut(s) 336, 506
XapI RAATTY 1 cut(s) 8
XbaI TCTAGA 1 cut(s) 967
XceI RCATGY 1 cut(s) 473
XmiI GTMKAC 1 cut(s) 684
XspI CTAG 4 cut(s) 62, 180, 696, 968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.