Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003102

Physical Location & Seq

Genomic Coordinates Forward (+)

73805227 .. 73808600

Gene Structure 3374 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0621100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGCATACCAAAACCTCAACATGGCTCTCCTTCTTCATCTTCATCTTCTTCTCACTTTTCTACCTCTTTCTCTGTGATCCCAGAACCTCGGAAGCTGGCCTCTACTGCGGAGCTGCCAAGCCACCACCAAAGGCTAGCTTCATTCCAACTTTCGTCGCAGAAATGGCGAGTTTATCAGAGCTCATCACCAAACATCACTGGGGAACCCATTTCTTTAACTCCACGCTCCCCATGTACGGCCTAGCGCAATGCTACAATGACCTGTCGCACACTGATTGTCTTCTCTGCTACGCCGCCAGCCGCACCGAGATCCCCCGCTGCCTCCCCTCCCTCTCCGCCCGCATCTTTCTCGACGGCTGCTTCCTCCGCTACGACAACTACAGCTTCTACTCCGAAGCTTCCGTCCCCGCCGTCGACTCTGTCGTCTGCAGCCAAGAAGAGGCGGCGGACGCGGCGGTGTTTAAGGAGAACGTCGCGGAGGTGATTGAGAGGGTTAAGAGGTCCGCGGCGGAGAATGGGGGGTTTGGGGTAGGGGAAGTGGGTGGGGAGGTGTATGCTTTGGGGCAGTGCTGGAAGACGGTGGTTGGTGATGGGTGTAGAGAGTGTTTGGAGAAGGGAGGTGAGGCGGTGAGAGGGTGTGGGTTGAAGACAGAAGGCAAGGCTTTGAATGCTGGATGTTACTTGAGGTATTCGACTCGGAAGTTCTATAACGACGAGGGGGAAGCAGAGCATGAGCATGGGTTTACAGATAGAAGGGGAATCATCGTAGCAATTGTTTTGGGAGCAGTTGCTTTCACAGTGCTGTCTCTCTTTGCTGCTTATGCAGGCTATACAAAGCTGGTGAAGATCAGAAAAGAGTGCAGTAATCTAGGCTTGGTGTCAATAAGCATTAGCAAGTATTCTGGCTTGAGTTTCAAGTATGAAACACTAGAGAAGGCCACAGATTATTTTAACACCTCGAGAAAAATAGGGGAAGGGGGAGGTGGTACTGTGTTTAAGGGGACTCTTCCGAATGGCAAAACCGTAGCTGTTAAGAGATTGTTCTACAATACCAGGCAATGGGTAGATGAGTTCTTCAATGAGGTGAATTTGATCAGTGGAATTCAGCACAAGCATCTAGTGAAGCTTTTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTGCTGGTGTATGAATATGTGCCTAACAGGAGCCTCGATCAATTCCTTTTCGATAAGAACAATGATCAGTTTCTTAACTGGAAGCAGCGGTTTGATATTATTGTCGGAACAGCTGAAGGGATTGCGTATCTTCATGAAGGCTCTGAAGTAAGAATAATCCACAGGGACATAAAAAGCAGCAATGTTCTTCTGGATGAGAATCTTAGCCCAAAGATTGCAGACTTTGGCCTTGCTCGGTGTTTTGCTTCCGACAAGTCTCATCTTAGCACCGGCATTGCCGGAACACTAGGTTATATGGCCCCAGAGTATCTTGTTCAAGGGCAACTTACAGAGAAAGCAGACGTTTATAGCTTCGGAGTGCTAGTTCTCGAGATTGTGTCTGGTATGAGGAATAGCACCTTCAAACAGGCGGACACTGACTTTGATTCACTACTACACAAAGTTTGGAAACACTACAGATCAAACGAGTTGGCCAACGTGGTTGATCCTTGCTTGAGAGATCATGAGTTGCCAGCAAAAGAGGTATCAAATGTTCTTCAAATTGGACTTCTGTGCACACAGGCCTCAGTTGCTTTGAGACCATCTATGGCTGAAGTAGTTCTAATGCTAACAGCCAACAAAGAAAGTGACATTCCCATTCCAAACCAACCTCCCTTTCTAAATGCCACGACACTAGAGCAAGCCAGGTCCATTAGGTCTAATAGCGCAAACAGCTTCGTCTCAAATACTTTAACAAAAGTTGAGACGTCCTACACCTCATCAGAGTCTTCCACCATGCCTAGTTTGGATAATATGGGACATATATCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010087 GO:0010088 GO:0010089 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_CC_LHEQLE Myb_DNA-binding

Protein Analysis

657

Amino Acids

72.62

Weight (kDa)

6.02

Isoelectric Point (pI)

34.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	68 - 127	1.3e-10	Salt stress response/antifungal
Stress-antifung	PF01657	143 - 232	1.7e-11	Salt stress response/antifungal
Pkinase	PF00069	317 - 540	4.9e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	319 - 587	2.9e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003102)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04450 AT3G04450 AT3G04450 AT3G04450 AT5G29000 AT5G29000 AT5G29000 AT5G29000
fragaria_vesca	FvH4_6g01670 FvH4_6g01670 FvH4_6g01670 FvH4_6g01670 FvH4_6g01670 FvH4_6g01670 FvH4_6g01670
malus_domestica	MD04G1231600.v1.1 MD12G1249600.v1.1
prunus_persica	Prupe.6G351000_v2.0.a1 Prupe.6G351000_v2.0.a1 Prupe.6G351000_v2.0.a1 Prupe.6G351000_v2.0.a1 Prupe.6G351000_v2.0.a1
pyrus_communis	pycom04g20490 pycom12g22940
rosa_chinensis	RchiOBHm_Chr3g0449471
rosa_laevigata	RLG00000025828
rosa_multiflora	Rmu_sc0019012.1_g000004
rosa_roxburghii	Rroxscaffold_6G00427420
rosa_rugosa	Rorug02G0621100 Rorug02G0621200 Rorug02G0621300
rosa_samantha	Rh3AG018800 Rh3AG019400 Rh3BG019200 Rh3CG018100 Rh3DG019400
rosa_wichuraiana	Rw3G001510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	422
AatII	GACGTC	1 cut(s)	1907
AccB7I	CCANNNNNTGG	1 cut(s)	1059
AccI	GTMKAC	1 cut(s)	414
AccII	CGCG	3 cut(s)	452, 476, 506
AclWI	GGATC	3 cut(s)	71, 304, 1637
AcoI	YGGCCR	1 cut(s)	1629
AcsI	RAATTY	2 cut(s)	1087, 1101
AcuI	CTGAAG	3 cut(s)	1293, 1323, 1770
AcyI	GRCGYC	1 cut(s)	1904
AfaI	GTAC	2 cut(s)	236, 988
AfiI	CCNNNNNNNGG	4 cut(s)	21, 236, 439, 1059
AgsI	TTSAA	8 cut(s)	646, 667, 916, 1078, 1145, 1475, 1561, 1697
AjnI	CCWGG	2 cut(s)	1052, 1841
AjuI	GAANNNNNNNTTGG	2 cut(s)	1797, 1829
AloI	GAACNNNNNNTCC	2 cut(s)	1506, 1538
Alw21I	GWGCWC	2 cut(s)	183, 1715
Alw26I	GTCTC	5 cut(s)	810, 1419, 1729, 1882, 1895
Alw44I	GTGCAC	1 cut(s)	1711
AlwI	GGATC	3 cut(s)	71, 304, 1637
Ama87I	CYCGRG	2 cut(s)	958, 1526
AoxI	GGCC	8 cut(s)	97, 238, 936, 1147, 1384, 1455, 1629, 1719
ApaLI	GTGCAC	1 cut(s)	1711
ApeKI	GCWGC	7 cut(s)	113, 318, 357, 429, 815, 1243, 1335
ApoI	RAATTY	2 cut(s)	1087, 1101
ArsI	GACNNNNNNTTYG	4 cut(s)	387, 419, 1562, 1594
Asp700I	GAANNNNTTC	1 cut(s)	1755
AspLEI	GCGC	2 cut(s)	247, 1865
AspS9I	GGNCC	4 cut(s)	501, 1148, 1456, 1845
AsuHPI	GGTGA	7 cut(s)	178, 493, 599, 632, 640, 853, 1096
AsuNHI	GCTAGC	1 cut(s)	134
AvaI	CYCGRG	2 cut(s)	958, 1526
AvaII	GGWCC	2 cut(s)	501, 1845
BaeGI	GKGCMC	1 cut(s)	1715
BalI	TGGCCA	1 cut(s)	1631
BanII	GRGCYC	1 cut(s)	183
BbsI	GAAGAC	4 cut(s)	272, 581, 653, 1917
Bbv12I	GWGCWC	2 cut(s)	183, 1715
BbvI	GCAGC	7 cut(s)	100, 305, 344, 441, 802, 1255, 1347
BccI	CCATC	2 cut(s)	584, 1747
BceAI	ACGGC	3 cut(s)	253, 370, 395
BcgI	CGANNNNNNTGC	2 cut(s)	331, 365
BciT130I	CCWGG	2 cut(s)	1054, 1843
BclI	TGATCA	2 cut(s)	1092, 1222
BcoDI	GTCTC	5 cut(s)	810, 1419, 1729, 1882, 1895
BfaI	CTAG	9 cut(s)	135, 242, 869, 929, 1118, 1445, 1520, 1832, 1938
BfmI	CTRYAG	3 cut(s)	379, 427, 1612
Bme1390I	CCNGG	2 cut(s)	1054, 1843
Bme18I	GGWCC	2 cut(s)	501, 1845
BmeT110I	CYCGRG	2 cut(s)	958, 1526
BmgT120I	GGNCC	4 cut(s)	501, 1148, 1456, 1845
BmiI	GGNNCC	3 cut(s)	205, 1190, 1458
BmrFI	CCNGG	2 cut(s)	1054, 1843
BmrI	ACTGGG	1 cut(s)	208
BmsI	GCATC	2 cut(s)	351, 1123
BmtI	GCTAGC	1 cut(s)	138
BmuI	ACTGGG	1 cut(s)	208
BpiI	GAAGAC	4 cut(s)	272, 581, 653, 1917
BpuEI	CTTGAG	3 cut(s)	703, 928, 1672
BsaBI	GATNNNNATC	1 cut(s)	1356
BsaHI	GRCGYC	1 cut(s)	1904
BsaI	GGTCTC	1 cut(s)	1729
BsaJI	CCNNGG	2 cut(s)	87, 504
BsaXI	ACNNNNNCTCC	2 cut(s)	1506, 1536
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 236, 439, 1059
Bse118I	RCCGGY	1 cut(s)	1427
Bse1I	ACTGG	2 cut(s)	203, 1241
Bse3DI	GCAATG	4 cut(s)	254, 1064, 1345, 1431
Bse8I	GATNNNNATC	1 cut(s)	1356
BseBI	CCWGG	2 cut(s)	1054, 1843
BseDI	CCNNGG	2 cut(s)	87, 504
BseGI	GGATG	2 cut(s)	680, 1357
BseJI	GATNNNNATC	1 cut(s)	1356
BseLI	CCNNNNNNNGG	4 cut(s)	21, 236, 439, 1059
BseMI	GCAATG	4 cut(s)	254, 1064, 1345, 1431
BseMII	CTCAG	2 cut(s)	1143, 1737
BseNI	ACTGG	2 cut(s)	203, 1241
BseSI	GKGCMC	1 cut(s)	1715
BseXI	GCAGC	7 cut(s)	100, 305, 344, 441, 802, 1255, 1347
BsgI	GTGCAG	1 cut(s)	880
Bsh1236I	CGCG	3 cut(s)	452, 476, 506
BshFI	GGCC	8 cut(s)	99, 240, 938, 1149, 1386, 1457, 1631, 1721
BsiHKAI	GWGCWC	2 cut(s)	183, 1715
BsiHKCI	CYCGRG	2 cut(s)	958, 1526
BsiSI	CCGG	2 cut(s)	1428, 1437
BslFI	GGGAC	4 cut(s)	389, 1015, 1337, 1968
BslI	CCNNNNNNNGG	4 cut(s)	21, 236, 439, 1059
BsmAI	GTCTC	5 cut(s)	810, 1419, 1729, 1882, 1895
BsmBI	CGTCTC	2 cut(s)	1882, 1895
BsmFI	GGGAC	4 cut(s)	389, 1015, 1337, 1968
BsmI	GAATGC	1 cut(s)	673
BsnI	GGCC	8 cut(s)	99, 240, 938, 1149, 1386, 1457, 1631, 1721
Bso31I	GGTCTC	1 cut(s)	1729
BsoBI	CYCGRG	2 cut(s)	958, 1526
Bsp1286I	GDGCHC	2 cut(s)	183, 1715
Bsp143I	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
BspANI	GGCC	8 cut(s)	99, 240, 938, 1149, 1386, 1457, 1631, 1721
BspCNI	CTCAG	2 cut(s)	1144, 1736
BspFNI	CGCG	3 cut(s)	452, 476, 506
BspHI	TCATGA	2 cut(s)	1291, 1660
BspLI	GGNNCC	3 cut(s)	205, 1190, 1458
BspMAI	CTGCAG	1 cut(s)	431
BspOI	GCTAGC	1 cut(s)	138
BspPI	GGATC	3 cut(s)	71, 304, 1637
BspTNI	GGTCTC	1 cut(s)	1729
BsrDI	GCAATG	4 cut(s)	254, 1064, 1345, 1431
BsrFI	RCCGGY	1 cut(s)	1427
BsrI	ACTGG	2 cut(s)	203, 1241
BssAI	RCCGGY	1 cut(s)	1427
BssECI	CCNNGG	2 cut(s)	87, 504
BssMI	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
BssNI	GRCGYC	1 cut(s)	1904
Bst2UI	CCWGG	2 cut(s)	1054, 1843
Bst4CI	ACNGT	4 cut(s)	580, 799, 991, 1024
Bst6I	CTCTTC	2 cut(s)	432, 1011
BstACI	GRCGYC	1 cut(s)	1904
BstC8I	GCNNGC	8 cut(s)	97, 136, 298, 340, 826, 1160, 1671, 1839
BstDEI	CTNAG	4 cut(s)	1152, 1361, 1421, 1723
BstDSI	CCRYGG	1 cut(s)	504
BstF5I	GGATG	2 cut(s)	680, 1357
BstFNI	CGCG	3 cut(s)	452, 476, 506
BstHHI	GCGC	2 cut(s)	247, 1865
BstKTI	GATC	9 cut(s)	79, 312, 849, 1095, 1198, 1225, 1619, 1645, 1660
BstMAI	GTCTC	5 cut(s)	810, 1419, 1729, 1882, 1895
BstMBI	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
BstNI	CCWGG	2 cut(s)	1054, 1843
BstSCI	CCNGG	2 cut(s)	1052, 1841
BstSFI	CTRYAG	3 cut(s)	379, 427, 1612
BstSLI	GKGCMC	1 cut(s)	1715
BstUI	CGCG	3 cut(s)	452, 476, 506
BstV1I	GCAGC	7 cut(s)	100, 305, 344, 441, 802, 1255, 1347
BstV2I	GAAGAC	4 cut(s)	272, 581, 653, 1917
BstX2I	RGATCY	1 cut(s)	309
BstYI	RGATCY	1 cut(s)	309
BsuRI	GGCC	8 cut(s)	99, 240, 938, 1149, 1386, 1457, 1631, 1721
BtgI	CCRYGG	1 cut(s)	504
BtsCI	GGATG	2 cut(s)	680, 1357
BtsI	GCAGTG	1 cut(s)	572
BtsIMutI	CAGTG	6 cut(s)	196, 270, 572, 804, 1102, 1572
Cac8I	GCNNGC	8 cut(s)	97, 136, 298, 340, 826, 1160, 1671, 1839
CciI	TCATGA	2 cut(s)	1291, 1660
CfoI	GCGC	2 cut(s)	247, 1865
Cfr10I	RCCGGY	1 cut(s)	1427
Cfr13I	GGNCC	4 cut(s)	501, 1148, 1456, 1845
Cfr42I	CCGCGG	1 cut(s)	507
CseI	GACGC	1 cut(s)	458
Csp6I	GTAC	2 cut(s)	235, 987
CviAII	CATG	7 cut(s)	21, 232, 731, 737, 1292, 1661, 1933
CviQI	GTAC	2 cut(s)	235, 987
DdeI	CTNAG	4 cut(s)	1152, 1361, 1421, 1723
DpnI	GATC	9 cut(s)	78, 311, 848, 1094, 1197, 1224, 1618, 1644, 1659
DpnII	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
DrdI	GACNNNNNNGTC	1 cut(s)	422
DseDI	GACNNNNNNGTC	1 cut(s)	422
EaeI	YGGCCR	1 cut(s)	1629
Eam1104I	CTCTTC	2 cut(s)	432, 1011
EarI	CTCTTC	2 cut(s)	432, 1011
EciI	GGCGGA	4 cut(s)	325, 461, 524, 1583
Ecl136II	GAGCTC	1 cut(s)	181
Eco147I	AGGCCT	1 cut(s)	1721
Eco24I	GRGCYC	1 cut(s)	183
Eco31I	GGTCTC	1 cut(s)	1729
Eco47I	GGWCC	2 cut(s)	501, 1845
Eco53kI	GAGCTC	1 cut(s)	181
Eco57I	CTGAAG	3 cut(s)	1293, 1323, 1770
Eco88I	CYCGRG	2 cut(s)	958, 1526
EcoICRI	GAGCTC	1 cut(s)	181
EcoO109I	RGGNCCY	1 cut(s)	1148
EcoRI	GAATTC	1 cut(s)	1101
EcoRII	CCWGG	2 cut(s)	1052, 1841
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	183
Esp3I	CGTCTC	2 cut(s)	1882, 1895
FaeI	CATG	7 cut(s)	24, 235, 734, 740, 1295, 1664, 1936
FalI	AAGNNNNNCTT	4 cut(s)	122, 154, 1467, 1499
FaqI	GGGAC	4 cut(s)	389, 1015, 1337, 1968
FatI	CATG	7 cut(s)	20, 231, 730, 736, 1291, 1660, 1932
FauI	CCCGC	3 cut(s)	323, 347, 415
FbaI	TGATCA	2 cut(s)	1092, 1222
FblI	GTMKAC	1 cut(s)	414
FokI	GGATG	2 cut(s)	687, 1364
FriOI	GRGCYC	1 cut(s)	183
FspBI	CTAG	9 cut(s)	135, 242, 869, 929, 1118, 1445, 1520, 1832, 1938
GlaI	GCGC	2 cut(s)	246, 1864
HaeIII	GGCC	8 cut(s)	99, 240, 938, 1149, 1386, 1457, 1631, 1721
HapII	CCGG	2 cut(s)	1428, 1437
HgaI	GACGC	1 cut(s)	458
HhaI	GCGC	2 cut(s)	247, 1865
Hin1I	GRCGYC	1 cut(s)	1904
Hin1II	CATG	7 cut(s)	24, 235, 734, 740, 1295, 1664, 1936
Hin6I	GCGC	2 cut(s)	245, 1863
HinP1I	GCGC	2 cut(s)	245, 1863
HincII	GTYRAC	1 cut(s)	415
HindII	GTYRAC	1 cut(s)	415
HindIII	AAGCTT	2 cut(s)	396, 1124
HinfI	GANTC	7 cut(s)	416, 694, 759, 1003, 1357, 1583, 1922
HpaII	CCGG	2 cut(s)	1428, 1437
HphI	GGTGA	7 cut(s)	178, 493, 599, 632, 640, 853, 1096
Hpy166II	GTNNAC	3 cut(s)	415, 744, 1713
Hpy188III	TCNNGA	7 cut(s)	350, 960, 1292, 1349, 1526, 1528, 1661
Hpy8I	GTNNAC	3 cut(s)	415, 744, 1713
Hpy99I	CGWCG	5 cut(s)	158, 356, 416, 476, 716
HpyCH4III	ACNGT	4 cut(s)	580, 799, 991, 1024
HpyCH4IV	ACGT	4 cut(s)	471, 1500, 1635, 1904
HpyCH4V	TGCA	6 cut(s)	4, 429, 824, 861, 1376, 1713
HpyF3I	CTNAG	4 cut(s)	1152, 1361, 1421, 1723
HpySE526I	ACGT	4 cut(s)	471, 1500, 1635, 1904
Hsp92I	GRCGYC	1 cut(s)	1904
Hsp92II	CATG	7 cut(s)	24, 235, 734, 740, 1295, 1664, 1936
HspAI	GCGC	2 cut(s)	245, 1863
Ksp22I	TGATCA	2 cut(s)	1092, 1222
KspI	CCGCGG	1 cut(s)	507
Kzo9I	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
LmnI	GCTCC	4 cut(s)	110, 231, 782, 1188
Lsp1109I	GCAGC	7 cut(s)	100, 305, 344, 441, 802, 1255, 1347
LweI	GCATC	2 cut(s)	351, 1123
MaeI	CTAG	9 cut(s)	135, 242, 869, 929, 1118, 1445, 1520, 1832, 1938
MaeII	ACGT	4 cut(s)	471, 1500, 1635, 1904
MaeIII	GTNAC	2 cut(s)	677, 1784
MalI	GATC	9 cut(s)	78, 311, 848, 1094, 1197, 1224, 1618, 1644, 1659
MboI	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
MfeI	CAATTG	1 cut(s)	771
MflI	RGATCY	1 cut(s)	309
MhlI	GDGCHC	2 cut(s)	183, 1715
MlsI	TGGCCA	1 cut(s)	1631
MluCI	AATT	5 cut(s)	771, 1087, 1101, 1199, 1698
MluNI	TGGCCA	1 cut(s)	1631
MlyI	GAGTC	4 cut(s)	410, 688, 997, 1931
MmeI	TCCRAC	3 cut(s)	170, 1243, 1431
Mox20I	TGGCCA	1 cut(s)	1631
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1755
MscI	TGGCCA	1 cut(s)	1631
MseI	TTAA	8 cut(s)	216, 462, 495, 951, 996, 1032, 1233, 1889
MslI	CAYNNNNRTG	1 cut(s)	735
Msp20I	TGGCCA	1 cut(s)	1631
MspA1I	CMGCKG	4 cut(s)	318, 506, 1246, 1271
MspI	CCGG	2 cut(s)	1428, 1437
MspR9I	CCNGG	2 cut(s)	1054, 1843
MunI	CAATTG	1 cut(s)	771
Mva1269I	GAATGC	1 cut(s)	673
MvaI	CCWGG	2 cut(s)	1054, 1843
MvnI	CGCG	3 cut(s)	452, 476, 506
NdeII	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
NheI	GCTAGC	1 cut(s)	134
NlaIII	CATG	7 cut(s)	24, 235, 734, 740, 1295, 1664, 1936
NlaIV	GGNNCC	3 cut(s)	205, 1190, 1458
NmuCI	GTSAC	1 cut(s)	1784
NsiI	ATGCAT	1 cut(s)	6
PaeR7I	CTCGAG	2 cut(s)	958, 1526
PagI	TCATGA	2 cut(s)	1291, 1660
PceI	AGGCCT	1 cut(s)	1721
PcsI	WCGNNNNNNNCGW	1 cut(s)	420
PctI	GAATGC	1 cut(s)	673
PdmI	GAANNNNTTC	1 cut(s)	1755
PfeI	GAWTC	3 cut(s)	759, 1357, 1583
PflFI	GACNNNGTC	1 cut(s)	419
PflMI	CCANNNNNTGG	1 cut(s)	1059
PleI	GAGTC	4 cut(s)	410, 688, 997, 1930
PpsI	GAGTC	4 cut(s)	410, 688, 997, 1930
Psp124BI	GAGCTC	1 cut(s)	183
Psp6I	CCWGG	2 cut(s)	1052, 1841
PspGI	CCWGG	2 cut(s)	1052, 1841
PspN4I	GGNNCC	3 cut(s)	205, 1190, 1458
PspPI	GGNCC	4 cut(s)	501, 1148, 1456, 1845
PsrI	GAACNNNNNNTAC	2 cut(s)	1674, 1706
PstI	CTGCAG	1 cut(s)	431
PsuI	RGATCY	1 cut(s)	309
PsyI	GACNNNGTC	1 cut(s)	419
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	2 cut(s)	236, 988
RsaNI	GTAC	2 cut(s)	235, 987
RseI	CAYNNNNRTG	1 cut(s)	735
SacI	GAGCTC	1 cut(s)	183
SacII	CCGCGG	1 cut(s)	507
SalI	GTCGAC	1 cut(s)	413
SaqAI	TTAA	8 cut(s)	216, 462, 495, 951, 996, 1032, 1233, 1889
Sau3AI	GATC	9 cut(s)	76, 309, 846, 1092, 1195, 1222, 1616, 1642, 1657
Sau96I	GGNCC	4 cut(s)	501, 1148, 1456, 1845
SchI	GAGTC	4 cut(s)	410, 688, 997, 1931
ScrFI	CCNGG	2 cut(s)	1054, 1843
SduI	GDGCHC	2 cut(s)	183, 1715
SfaNI	GCATC	2 cut(s)	351, 1123
SfcI	CTRYAG	3 cut(s)	379, 427, 1612
Sfr274I	CTCGAG	2 cut(s)	958, 1526
Sfr303I	CCGCGG	1 cut(s)	507
SgrBI	CCGCGG	1 cut(s)	507
SinI	GGWCC	2 cut(s)	501, 1845
SlaI	CTCGAG	2 cut(s)	958, 1526
SmiMI	CAYNNNNRTG	1 cut(s)	735
SmlI	CTYRAG	5 cut(s)	682, 907, 958, 1526, 1651
SmoI	CTYRAG	5 cut(s)	682, 907, 958, 1526, 1651
Sse9I	AATT	5 cut(s)	771, 1087, 1101, 1199, 1698
SseBI	AGGCCT	1 cut(s)	1721
SspMI	CTAG	9 cut(s)	135, 242, 869, 929, 1118, 1445, 1520, 1832, 1938
SstI	GAGCTC	1 cut(s)	183
StuI	AGGCCT	1 cut(s)	1721
StyD4I	CCNGG	2 cut(s)	1052, 1841
TaaI	ACNGT	4 cut(s)	580, 799, 991, 1024
TaiI	ACGT	4 cut(s)	474, 1503, 1638, 1907
TaqI	TCGA	7 cut(s)	351, 414, 692, 959, 1194, 1209, 1527
TasI	AATT	5 cut(s)	771, 1087, 1101, 1199, 1698
TauI	GCSGC	5 cut(s)	296, 303, 446, 455, 509
TfiI	GAWTC	3 cut(s)	759, 1357, 1583
Tru1I	TTAA	8 cut(s)	216, 462, 495, 951, 996, 1032, 1233, 1889
Tru9I	TTAA	8 cut(s)	216, 462, 495, 951, 996, 1032, 1233, 1889
TscAI	CASTG	6 cut(s)	203, 277, 572, 804, 1102, 1579
TseFI	GTSAC	1 cut(s)	1784
TseI	GCWGC	7 cut(s)	113, 318, 357, 429, 815, 1243, 1335
Tsp45I	GTSAC	1 cut(s)	1784
TspDTI	ATGAA	7 cut(s)	25, 31, 130, 936, 1185, 1280, 1308
TspGWI	ACGGA	1 cut(s)	391
TspRI	CASTG	6 cut(s)	203, 277, 572, 804, 1102, 1579
Tth111I	GACNNNGTC	1 cut(s)	419
Van91I	CCANNNNNTGG	1 cut(s)	1059
VneI	GTGCAC	1 cut(s)	1711
VpaK11BI	GGWCC	2 cut(s)	501, 1845
XapI	RAATTY	2 cut(s)	1087, 1101
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1939
XhoI	CTCGAG	2 cut(s)	958, 1526
XmiI	GTMKAC	1 cut(s)	414
XmnI	GAANNNNTTC	1 cut(s)	1755
XspI	CTAG	9 cut(s)	135, 242, 869, 929, 1118, 1445, 1520, 1832, 1938
ZraI	GACGTC	1 cut(s)	1905
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.