pycom05g01850

UPF0496 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0010852
Physical Location & Seq
Forward (+)
2208287 .. 2210240
1954 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1668 bp
ATGCAGTTTGTTCTCTCGTTTATCCGGTTAAAAAGTGTGTGGAGCTCCAAATATTTACATCCACCGTGTCCGCCCCGTGTACGCTTCGCGTGCCCCGTTAGCAAACCACAAAAGTTAATTACTCATTTCTATCCCGAACCCCCCTCCCTTCCCCTCCATAAAACGCAGACTCTCTCCGCCTTCTGTCCCTCCAACTCTCTCACCTCTCTCTCCTCCCAACACACTCCTCTTTCTCTCTCTACTTTGGATTGGACTGTGAGAGAAATGCCAGCGACGGAATACTCGTCAGCTGGTTCCAATCAAGTCGGAAGGTCAATCTTCAGTCTCAGACGCAATCAGTTGAATTCAATGGAAAGTCACGGCCTTTCAGGTGGCAGCGGTAGTGGCGGATTGGACCTCGATTCCTTCCAAACCCACGTCGCCAATTGCTTCCACAACCTCTCCTCCTCCGCCCACGACCTCCTCTCCCTCCCATGGCTCCGAGACCTCCTCGAATCCTTCATCCGCATACACCAGGAGTTCAAAACCCTCCTCATCCTCTCCTCCACCAAAACCCACATCTCCAAACCCACCGTCGACCGCTACATCTCCGACTATTTCGAGCGCCACGTCAAGGCCCTCGACGTCTGCAACGCCATCCGCGACGGAATGGAGCAGATGCGCCAGTGGCTCAAGCTGCTCGACATCGTCCTCGTCGCGCTAGACCGGGACAGGACGCTCGGCGAGGGCCAATTTCGCCGGGCGAAGAAGGCCCTCGTCGACCTAGCCATCCCCACCGGAACCGCTCCTTCGGCCGAAACAACAACACAAAGGATCGATCAGCACCAGCAGCACCGGTCGTTCGGCCACTTCCGATCTCTGTCCTGGAGCGTCTCACGGTCGTGGTCGGCCGCCAGGCAGCTCCAAGCAATCGGGAACAATCTATACGCCCCGAGGCCCAATGAAAATTTGGCCTCCAGTGGGCTGGCCCCGGCGGTTTTCACAATCAATTCGGTTTTGCTGTTCGTAATGTGGGCACTGGTGGCGGCGATACCCTGCCAGGACAGGGGATTGCAGGTGCATTTCAACGTGCCGAGGAGCTTCGCGTGGGCGGGGTCAATGCTGTCTCTGCACGAGCGGATTATGGACGAGTCGAAGCGGCGGGACAGGAGGAATGCCTGCGCATTGTTGAAGGAGATTCATCAGATCGAACGGTGCTCTCGGGTGATTGGCGATCTGGCTGACTCCGCGCACTTCCCGCTTGCGGAGGAGAAGGAGAGGGAGGTGAGGCAGAGAGTGCAGGAACTGTCGAGCCTGTGCCAGGGGATTAAGGAGGGGTTGGATCCTCTGGAGCGGCAGGTCAGGGAAGTGTTCCATGGAATTGTAAAAAGCCGAACGGAGGGGATGGACTCTGAAGAAGAAGACGATGATGAGATCAATTTTGGCGCCAATAAAAATTGGGTAAGGAGGAGATATGACTTTTTTCTTTCTTTGTATTTAGTCATCACTCAATGGATTAGTAATCACCATATATATTGTGTCCTTTTTTTTTCTTCTACTTGCCCCTTAATTTGTGTTGTTGCTGATTTAATTTGCCTTTGTGTAATGGAATTCCTGAGCATGCTTCTGGCTGCTGCTCTTTCTCATTTTTGGTTCAATTGTTACATCAAATTTTCTTTTCTTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BPS1

Protein Analysis

556

Amino Acids

63.13

Weight (kDa)

8.45

Isoelectric Point (pI)

43.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ROH1-like PF05633 89 - 464 2.7e-135 Protein ROH1-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010852)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18740 AT1G74450
fragaria_vesca FvH4_2g13680 FvH4_2g13680
malus_domestica MD05G1026700.v1.1 MD10G1025900.v1.1
prunus_persica Prupe.8G031200_v2.0.a1
pyrus_communis pycom05g01850 pycom10g01740
rosa_chinensis RchiOBHm_Chr6g0275361
rosa_laevigata RLG00000013471
rosa_multiflora Rmu_co8417379.1_g000001 Rmu_sc0004143.1_g000001 Rmu_sc0019329.1_g000002
rosa_roxburghii Rroxscaffold_7G00193380
rosa_rugosa Rorug06G0091100
rosa_samantha Rh6AG205000 Rh6CG210200 Rh6DG200500
rosa_wichuraiana Rw6G017790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1045
AatII GACGTC 1 cut(s) 627
Acc16I TGCGCA 1 cut(s) 1162
Acc36I ACCTGC 2 cut(s) 1045, 1327
AccB1I GGYRCC 1 cut(s) 1424
AccBSI CCGCTC 3 cut(s) 785, 1117, 1333
AccI GTMKAC 2 cut(s) 576, 759
AccII CGCG 5 cut(s) 89, 642, 698, 1085, 1229
AclWI GGATC 3 cut(s) 821, 1316, 1329
AcoI YGGCCR 3 cut(s) 792, 844, 888
AcsI RAATTY 4 cut(s) 343, 946, 1589, 1649
AcuI CTGAAG 2 cut(s) 304, 1413
AcyI GRCGYC 2 cut(s) 624, 1425
AfaI GTAC 1 cut(s) 81
AfiI CCNNNNNNNGG 7 cut(s) 474, 613, 960, 1045, 1243, 1300, 1378
AgeI ACCGGT 1 cut(s) 834
AgsI TTSAA 6 cut(s) 343, 348, 523, 1066, 1171, 1636
AjiI CACGTC 2 cut(s) 418, 610
AjnI CCWGG 5 cut(s) 513, 863, 893, 1038, 1299
AleI CACNNNNGTG 1 cut(s) 880
AluBI AGCT 5 cut(s) 45, 290, 676, 901, 1080
AluI AGCT 5 cut(s) 45, 290, 676, 901, 1080
Alw21I GWGCWC 2 cut(s) 47, 1199
Alw26I GTCTC 4 cut(s) 329, 477, 877, 1110
AlwI GGATC 3 cut(s) 821, 1316, 1329
AlwNI CAGNNNCTG 1 cut(s) 1285
Ama87I CYCGRG 2 cut(s) 931, 1200
ApeKI GCWGC 6 cut(s) 375, 676, 829, 898, 1610, 1613
ApoI RAATTY 4 cut(s) 343, 946, 1589, 1649
ArsI GACNNNNNNTTYG 2 cut(s) 558, 590
AsiGI ACCGGT 1 cut(s) 834
AspLEI GCGC 6 cut(s) 606, 663, 700, 1163, 1231, 1427
AspS9I GGNCC 6 cut(s) 394, 616, 727, 751, 936, 967
AsuC2I CCSGG 3 cut(s) 707, 740, 971
AsuHPI GGTGA 4 cut(s) 193, 1216, 1276, 1496
AvaI CYCGRG 2 cut(s) 931, 1200
AvaII GGWCC 1 cut(s) 394
BaeGI GKGCMC 2 cut(s) 95, 1018
BamHI GGATCC 1 cut(s) 1321
BanI GGYRCC 1 cut(s) 1424
BanII GRGCYC 1 cut(s) 47
BauI CACGAG 1 cut(s) 1112
BbsI GAAGAC 1 cut(s) 1407
Bbv12I GWGCWC 2 cut(s) 47, 1199
BbvI GCAGC 6 cut(s) 387, 663, 841, 910, 1597, 1600
BccI CCATC 3 cut(s) 644, 776, 1378
BceAI ACGGC 1 cut(s) 376
BciT130I CCWGG 5 cut(s) 515, 865, 895, 1040, 1301
BcnI CCSGG 3 cut(s) 707, 740, 971
BcoDI GTCTC 4 cut(s) 329, 477, 877, 1110
BfaI CTAG 2 cut(s) 701, 764
BfoI RGCGCY 2 cut(s) 607, 1428
BfuAI ACCTGC 2 cut(s) 1045, 1327
Bme1390I CCNGG 8 cut(s) 515, 707, 740, 865, 895, 971, 1040, 1301
Bme18I GGWCC 1 cut(s) 394
BmeT110I CYCGRG 2 cut(s) 931, 1200
BmgBI CACGTC 2 cut(s) 418, 610
BmgT120I GGNCC 6 cut(s) 394, 616, 727, 751, 936, 967
BmiI GGNNCC 6 cut(s) 295, 479, 781, 969, 1323, 1426
BmrFI CCNGG 8 cut(s) 515, 707, 740, 865, 895, 971, 1040, 1301
BmsI GCATC 1 cut(s) 648
BpiI GAAGAC 1 cut(s) 1407
BplI GAGNNNNNCTC 2 cut(s) 474, 506
BpmI CTGGAG 3 cut(s) 886, 940, 1349
Bpu10I CCTNAGC 1 cut(s) 1595
BpuEI CTTGAG 1 cut(s) 656
BpuMI CCSGG 3 cut(s) 707, 740, 971
Bsa29I ATCGAT 1 cut(s) 816
BsaHI GRCGYC 2 cut(s) 624, 1425
BsaI GGTCTC 1 cut(s) 477
BsaJI CCNNGG 6 cut(s) 473, 932, 969, 1073, 1300, 1354
BsaWI WCCGGW 3 cut(s) 24, 776, 834
BsaXI ACNNNNNCTCC 6 cut(s) 425, 428, 449, 455, 458, 479
Bsc4I CCNNNNNNNGG 7 cut(s) 474, 613, 960, 1045, 1243, 1300, 1378
Bse118I RCCGGY 1 cut(s) 834
Bse1I ACTGG 3 cut(s) 664, 957, 1023
BseBI CCWGG 5 cut(s) 515, 865, 895, 1040, 1301
BseCI ATCGAT 1 cut(s) 816
BseDI CCNNGG 6 cut(s) 473, 932, 969, 1073, 1300, 1354
BseGI GGATG 6 cut(s) 58, 501, 534, 636, 768, 1389
BseLI CCNNNNNNNGG 7 cut(s) 474, 613, 960, 1045, 1243, 1300, 1378
BseMII CTCAG 2 cut(s) 340, 1586
BseNI ACTGG 3 cut(s) 664, 957, 1023
BseSI GKGCMC 2 cut(s) 95, 1018
BseX3I CGGCCG 2 cut(s) 792, 888
BseXI GCAGC 6 cut(s) 387, 663, 841, 910, 1597, 1600
BsgI GTGCAG 2 cut(s) 1094, 1298
Bsh1236I CGCG 5 cut(s) 89, 642, 698, 1085, 1229
Bsh1285I CGRYCG 5 cut(s) 580, 795, 839, 881, 891
BshNI GGYRCC 1 cut(s) 1424
BshTI ACCGGT 1 cut(s) 834
BshVI ATCGAT 1 cut(s) 816
BsiEI CGRYCG 5 cut(s) 580, 795, 839, 881, 891
BsiHKAI GWGCWC 2 cut(s) 47, 1199
BsiHKCI CYCGRG 2 cut(s) 931, 1200
BsiSI CCGG 6 cut(s) 25, 706, 739, 777, 835, 971
BslFI GGGAC 3 cut(s) 171, 722, 1157
BslI CCNNNNNNNGG 7 cut(s) 474, 613, 960, 1045, 1243, 1300, 1378
BsmAI GTCTC 4 cut(s) 329, 477, 877, 1110
BsmBI CGTCTC 1 cut(s) 877
BsmFI GGGAC 3 cut(s) 171, 722, 1157
BsmI GAATGC 1 cut(s) 1159
Bso31I GGTCTC 1 cut(s) 477
BsoBI CYCGRG 2 cut(s) 931, 1200
Bsp1286I GDGCHC 4 cut(s) 47, 95, 1018, 1199
Bsp143I GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
Bsp19I CCATGG 2 cut(s) 473, 1354
BspCNI CTCAG 2 cut(s) 339, 1587
BspDI ATCGAT 1 cut(s) 816
BspFNI CGCG 5 cut(s) 89, 642, 698, 1085, 1229
BspLI GGNNCC 6 cut(s) 295, 479, 781, 969, 1323, 1426
BspMI ACCTGC 2 cut(s) 1045, 1327
BspPI GGATC 3 cut(s) 821, 1316, 1329
BspT107I GGYRCC 1 cut(s) 1424
BspTNI GGTCTC 1 cut(s) 477
BsrBI CCGCTC 3 cut(s) 785, 1117, 1333
BsrFI RCCGGY 1 cut(s) 834
BsrI ACTGG 3 cut(s) 664, 957, 1023
BssAI RCCGGY 1 cut(s) 834
BssECI CCNNGG 6 cut(s) 473, 932, 969, 1073, 1300, 1354
BssMI GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
BssNI GRCGYC 2 cut(s) 624, 1425
BssSI CACGAG 1 cut(s) 1112
BssT1I CCWWGG 2 cut(s) 473, 1354
Bst2BI CACGAG 1 cut(s) 1112
Bst2UI CCWGG 5 cut(s) 515, 865, 895, 1040, 1301
Bst4CI ACNGT 6 cut(s) 66, 256, 574, 879, 1194, 1287
BstACI GRCGYC 2 cut(s) 624, 1425
BstAPI GCANNNNNTGC 1 cut(s) 1276
BstC8I GCNNGC 6 cut(s) 91, 270, 966, 1159, 1242, 1601
BstDEI CTNAG 2 cut(s) 326, 1595
BstDSI CCRYGG 2 cut(s) 473, 1354
BstENI CCTNNNNNAGG 1 cut(s) 1298
BstF5I GGATG 6 cut(s) 58, 501, 534, 636, 768, 1389
BstFNI CGCG 5 cut(s) 89, 642, 698, 1085, 1229
BstH2I RGCGCY 2 cut(s) 607, 1428
BstHHI GCGC 6 cut(s) 606, 663, 700, 1163, 1231, 1427
BstKTI GATC 7 cut(s) 816, 820, 857, 1188, 1216, 1324, 1416
BstMAI GTCTC 4 cut(s) 329, 477, 877, 1110
BstMBI GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
BstMCI CGRYCG 5 cut(s) 580, 795, 839, 881, 891
BstNI CCWGG 5 cut(s) 515, 865, 895, 1040, 1301
BstNSI RCATGY 1 cut(s) 1603
BstSCI CCNGG 8 cut(s) 513, 705, 738, 863, 893, 969, 1038, 1299
BstSLI GKGCMC 2 cut(s) 95, 1018
BstUI CGCG 5 cut(s) 89, 642, 698, 1085, 1229
BstV1I GCAGC 6 cut(s) 387, 663, 841, 910, 1597, 1600
BstV2I GAAGAC 1 cut(s) 1407
BstX2I RGATCY 1 cut(s) 1321
BstXI CCANNNNNNTGG 1 cut(s) 964
BstYI RGATCY 1 cut(s) 1321
BstZI CGGCCG 2 cut(s) 792, 888
Bsu15I ATCGAT 1 cut(s) 816
BsuTUI ATCGAT 1 cut(s) 816
BtgI CCRYGG 2 cut(s) 473, 1354
BtrI CACGTC 2 cut(s) 418, 610
BtsCI GGATG 6 cut(s) 58, 501, 534, 636, 768, 1389
BtsIMutI CAGTG 3 cut(s) 671, 964, 1016
BveI ACCTGC 2 cut(s) 1045, 1327
Cac8I GCNNGC 6 cut(s) 91, 270, 966, 1159, 1242, 1601
CaiI CAGNNNCTG 1 cut(s) 1285
CfoI GCGC 6 cut(s) 606, 663, 700, 1163, 1231, 1427
Cfr10I RCCGGY 1 cut(s) 834
Cfr13I GGNCC 6 cut(s) 394, 616, 727, 751, 936, 967
ClaI ATCGAT 1 cut(s) 816
CseI GACGC 3 cut(s) 339, 724, 859
Csp6I GTAC 1 cut(s) 80
CspAI ACCGGT 1 cut(s) 834
CviAII CATG 3 cut(s) 474, 1355, 1600
CviQI GTAC 1 cut(s) 80
DdeI CTNAG 2 cut(s) 326, 1595
DinI GGCGCC 1 cut(s) 1426
DpnI GATC 7 cut(s) 815, 819, 856, 1187, 1215, 1323, 1415
DpnII GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
EaeI YGGCCR 3 cut(s) 792, 844, 888
EagI CGGCCG 2 cut(s) 792, 888
EciI GGCGGA 4 cut(s) 60, 166, 402, 439
Ecl136II GAGCTC 1 cut(s) 45
EclXI CGGCCG 2 cut(s) 792, 888
Eco130I CCWWGG 2 cut(s) 473, 1354
Eco24I GRGCYC 1 cut(s) 47
Eco31I GGTCTC 1 cut(s) 477
Eco47I GGWCC 1 cut(s) 394
Eco52I CGGCCG 2 cut(s) 792, 888
Eco53kI GAGCTC 1 cut(s) 45
Eco57I CTGAAG 2 cut(s) 304, 1413
Eco88I CYCGRG 2 cut(s) 931, 1200
EcoICRI GAGCTC 1 cut(s) 45
EcoNI CCTNNNNNAGG 1 cut(s) 1298
EcoO109I RGGNCCY 2 cut(s) 616, 751
EcoRI GAATTC 2 cut(s) 343, 1589
EcoRII CCWGG 5 cut(s) 513, 863, 893, 1038, 1299
EcoT14I CCWWGG 2 cut(s) 473, 1354
EcoT38I GRGCYC 1 cut(s) 47
EgeI GGCGCC 1 cut(s) 1426
EheI GGCGCC 1 cut(s) 1426
ErhI CCWWGG 2 cut(s) 473, 1354
Esp3I CGTCTC 1 cut(s) 877
FaeI CATG 3 cut(s) 477, 1358, 1603
FaqI GGGAC 3 cut(s) 171, 722, 1157
FatI CATG 3 cut(s) 473, 1354, 1599
FauI CCCGC 3 cut(s) 1084, 1134, 1245
FblI GTMKAC 2 cut(s) 576, 759
FokI GGATG 6 cut(s) 45, 488, 521, 623, 755, 1396
FriOI GRGCYC 1 cut(s) 47
FspBI CTAG 2 cut(s) 701, 764
FspI TGCGCA 1 cut(s) 1162
GlaI GCGC 6 cut(s) 605, 662, 699, 1162, 1230, 1426
GsuI CTGGAG 3 cut(s) 886, 940, 1349
HaeII RGCGCY 2 cut(s) 607, 1428
HapII CCGG 6 cut(s) 25, 706, 739, 777, 835, 971
HgaI GACGC 3 cut(s) 339, 724, 859
HhaI GCGC 6 cut(s) 606, 663, 700, 1163, 1231, 1427
Hin1I GRCGYC 2 cut(s) 624, 1425
Hin1II CATG 3 cut(s) 477, 1358, 1603
Hin6I GCGC 6 cut(s) 604, 661, 698, 1161, 1229, 1425
HinP1I GCGC 6 cut(s) 604, 661, 698, 1161, 1229, 1425
HincII GTYRAC 2 cut(s) 577, 760
HindII GTYRAC 2 cut(s) 577, 760
HinfI GANTC 7 cut(s) 169, 401, 494, 1130, 1177, 1223, 1388
HpaII CCGG 6 cut(s) 25, 706, 739, 777, 835, 971
HphI GGTGA 4 cut(s) 193, 1216, 1276, 1496
Hpy166II GTNNAC 3 cut(s) 80, 577, 760
Hpy188I TCNGA 8 cut(s) 308, 329, 482, 592, 854, 1185, 1393, 1667
Hpy188III TCNNGA 4 cut(s) 134, 913, 1328, 1594
Hpy8I GTNNAC 3 cut(s) 80, 577, 760
Hpy99I CGWCG 7 cut(s) 277, 422, 578, 626, 647, 698, 761
HpyAV CCTTC 9 cut(s) 158, 190, 303, 415, 508, 742, 798, 1165, 1246
HpyCH4III ACNGT 6 cut(s) 66, 256, 574, 879, 1194, 1287
HpyCH4IV ACGT 4 cut(s) 417, 609, 624, 1068
HpyCH4V TGCA 6 cut(s) 4, 630, 1054, 1060, 1111, 1279
HpyF3I CTNAG 2 cut(s) 326, 1595
HpySE526I ACGT 4 cut(s) 417, 609, 624, 1068
Hsp92I GRCGYC 2 cut(s) 624, 1425
Hsp92II CATG 3 cut(s) 477, 1358, 1603
HspAI GCGC 6 cut(s) 604, 661, 698, 1161, 1229, 1425
KasI GGCGCC 1 cut(s) 1424
Kzo9I GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
LmnI GCTCC 9 cut(s) 42, 50, 483, 652, 790, 867, 906, 1077, 1330
Lsp1109I GCAGC 6 cut(s) 387, 663, 841, 910, 1597, 1600
LweI GCATC 1 cut(s) 648
MaeI CTAG 2 cut(s) 701, 764
MaeII ACGT 4 cut(s) 417, 609, 624, 1068
MaeIII GTNAC 2 cut(s) 356, 1640
MalI GATC 7 cut(s) 815, 819, 856, 1187, 1215, 1323, 1415
MbiI CCGCTC 3 cut(s) 785, 1117, 1333
MboI GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
MboII GAAGA 7 cut(s) 310, 757, 1406, 1409, 1412, 1524, 1652
MfeI CAATTG 2 cut(s) 424, 1636
MflI RGATCY 1 cut(s) 1321
MhlI GDGCHC 4 cut(s) 47, 95, 1018, 1199
Mly113I GGCGCC 1 cut(s) 1425
MlyI GAGTC 4 cut(s) 163, 1139, 1217, 1382
MmeI TCCRAC 4 cut(s) 216, 286, 615, 1299
MseI TTAA 5 cut(s) 29, 116, 1308, 1547, 1568
MslI CAYNNNNRTG 1 cut(s) 880
MspA1I CMGCKG 2 cut(s) 290, 378
MspI CCGG 6 cut(s) 25, 706, 739, 777, 835, 971
MspR9I CCNGG 8 cut(s) 515, 707, 740, 865, 895, 971, 1040, 1301
MunI CAATTG 2 cut(s) 424, 1636
Mva1269I GAATGC 1 cut(s) 1159
MvaI CCWGG 5 cut(s) 515, 865, 895, 1040, 1301
MvnI CGCG 5 cut(s) 89, 642, 698, 1085, 1229
NarI GGCGCC 1 cut(s) 1425
NciI CCSGG 3 cut(s) 707, 740, 971
NcoI CCATGG 2 cut(s) 473, 1354
NdeII GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
NlaIII CATG 3 cut(s) 477, 1358, 1603
NlaIV GGNNCC 6 cut(s) 295, 479, 781, 969, 1323, 1426
NmeAIII GCCGAG 2 cut(s) 699, 1098
NmuCI GTSAC 1 cut(s) 356
NsbI TGCGCA 1 cut(s) 1162
NspI RCATGY 1 cut(s) 1603
OliI CACNNNNGTG 1 cut(s) 880
PaeI GCATGC 1 cut(s) 1603
PaqCI CACCTGC 1 cut(s) 1045
PcsI WCGNNNNNNNCGW 4 cut(s) 93, 281, 606, 639
PctI GAATGC 1 cut(s) 1159
PfeI GAWTC 3 cut(s) 401, 494, 1177
PflFI GACNNNGTC 1 cut(s) 686
PfoI TCCNGGA 1 cut(s) 863
PinAI ACCGGT 1 cut(s) 834
PleI GAGTC 4 cut(s) 163, 1138, 1217, 1382
PluTI GGCGCC 1 cut(s) 1428
PpsI GAGTC 4 cut(s) 163, 1138, 1217, 1382
Psp124BI GAGCTC 1 cut(s) 47
Psp6I CCWGG 5 cut(s) 513, 863, 893, 1038, 1299
PspGI CCWGG 5 cut(s) 513, 863, 893, 1038, 1299
PspN4I GGNNCC 6 cut(s) 295, 479, 781, 969, 1323, 1426
PspPI GGNCC 6 cut(s) 394, 616, 727, 751, 936, 967
PsrI GAACNNNNNNTAC 2 cut(s) 908, 940
PstNI CAGNNNCTG 1 cut(s) 1285
PsuI RGATCY 1 cut(s) 1321
PsyI GACNNNGTC 1 cut(s) 686
PvuII CAGCTG 1 cut(s) 290
RsaI GTAC 1 cut(s) 81
RsaNI GTAC 1 cut(s) 80
RseI CAYNNNNRTG 1 cut(s) 880
SacI GAGCTC 1 cut(s) 47
SalI GTCGAC 2 cut(s) 575, 758
SaqAI TTAA 5 cut(s) 29, 116, 1308, 1547, 1568
Sau3AI GATC 7 cut(s) 813, 817, 854, 1185, 1213, 1321, 1413
Sau96I GGNCC 6 cut(s) 394, 616, 727, 751, 936, 967
SchI GAGTC 4 cut(s) 163, 1139, 1217, 1382
ScrFI CCNGG 8 cut(s) 515, 707, 740, 865, 895, 971, 1040, 1301
SduI GDGCHC 4 cut(s) 47, 95, 1018, 1199
SfaNI GCATC 1 cut(s) 648
SfoI GGCGCC 1 cut(s) 1426
SinI GGWCC 1 cut(s) 394
SmiMI CAYNNNNRTG 1 cut(s) 880
SmlI CTYRAG 1 cut(s) 671
SmoI CTYRAG 1 cut(s) 671
SphI GCATGC 1 cut(s) 1603
SspDI GGCGCC 1 cut(s) 1424
SspI AATATT 1 cut(s) 53
SspMI CTAG 2 cut(s) 701, 764
SstI GAGCTC 1 cut(s) 47
StyD4I CCNGG 8 cut(s) 513, 705, 738, 863, 893, 969, 1038, 1299
StyI CCWWGG 2 cut(s) 473, 1354
TaaI ACNGT 6 cut(s) 66, 256, 574, 879, 1194, 1287
TaiI ACGT 4 cut(s) 420, 612, 627, 1071
TauI GCSGC 4 cut(s) 893, 1028, 1141, 1336
TfiI GAWTC 3 cut(s) 401, 494, 1177
Tru1I TTAA 5 cut(s) 29, 116, 1308, 1547, 1568
Tru9I TTAA 5 cut(s) 29, 116, 1308, 1547, 1568
TscAI CASTG 3 cut(s) 671, 964, 1023
TseFI GTSAC 1 cut(s) 356
TseI GCWGC 6 cut(s) 375, 676, 829, 898, 1610, 1613
Tsp45I GTSAC 1 cut(s) 356
TspDTI ATGAA 3 cut(s) 490, 957, 1169
TspGWI ACGGA 3 cut(s) 290, 660, 1391
TspRI CASTG 3 cut(s) 671, 964, 1023
Tth111I GACNNNGTC 1 cut(s) 686
VpaK11BI GGWCC 1 cut(s) 394
XagI CCTNNNNNAGG 1 cut(s) 1298
XapI RAATTY 4 cut(s) 343, 946, 1589, 1649
XceI RCATGY 1 cut(s) 1603
XcmI CCANNNNNNNNNTGG 1 cut(s) 946
XmiI GTMKAC 2 cut(s) 576, 759
XspI CTAG 2 cut(s) 701, 764
ZraI GACGTC 1 cut(s) 625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.