UPF0496 protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18740 AT1G74450 |
| fragaria_vesca | FvH4_2g13680 FvH4_2g13680 |
| malus_domestica | MD05G1026700.v1.1 MD10G1025900.v1.1 |
| prunus_persica | Prupe.8G031200_v2.0.a1 |
| pyrus_communis | pycom05g01850 pycom10g01740 |
| rosa_chinensis | RchiOBHm_Chr6g0275361 |
| rosa_laevigata | RLG00000013471 |
| rosa_multiflora | Rmu_co8417379.1_g000001 Rmu_sc0004143.1_g000001 Rmu_sc0019329.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00193380 |
| rosa_rugosa | Rorug06G0091100 |
| rosa_samantha | Rh6AG205000 Rh6CG210200 Rh6DG200500 |
| rosa_wichuraiana | Rw6G017790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 211 |
| Acc16I | TGCGCA | 1 cut(s) | 154 |
| Acc36I | ACCTGC | 1 cut(s) | 211 |
| AccI | GTMKAC | 1 cut(s) | 252 |
| AciI | CCGC | 2 cut(s) | 82, 237 |
| AcsI | RAATTY | 2 cut(s) | 62, 484 |
| AcyI | GRCGYC | 1 cut(s) | 365 |
| AfaI | GTAC | 2 cut(s) | 19, 433 |
| AflIII | ACRYGT | 1 cut(s) | 434 |
| AgsI | TTSAA | 5 cut(s) | 112, 319, 383, 461, 484 |
| AluBI | AGCT | 1 cut(s) | 95 |
| AluI | AGCT | 1 cut(s) | 95 |
| AoxI | GGCC | 1 cut(s) | 307 |
| ApeKI | GCWGC | 1 cut(s) | 343 |
| ApoI | RAATTY | 2 cut(s) | 62, 484 |
| AspLEI | GCGC | 2 cut(s) | 155, 208 |
| AspS9I | GGNCC | 1 cut(s) | 308 |
| BbsI | GAAGAC | 1 cut(s) | 333 |
| BbvI | GCAGC | 1 cut(s) | 355 |
| BciVI | GTATCC | 1 cut(s) | 271 |
| BfuAI | ACCTGC | 1 cut(s) | 211 |
| BfuI | GTATCC | 1 cut(s) | 271 |
| BisI | GCNGC | 1 cut(s) | 344 |
| BlpI | GCTNAGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 1 cut(s) | 345 |
| BmgT120I | GGNCC | 1 cut(s) | 308 |
| BmiI | GGNNCC | 1 cut(s) | 420 |
| BmrI | ACTGGG | 1 cut(s) | 418 |
| BmuI | ACTGGG | 1 cut(s) | 418 |
| BpiI | GAAGAC | 1 cut(s) | 333 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 192 |
| BsaHI | GRCGYC | 1 cut(s) | 365 |
| Bse1I | ACTGG | 3 cut(s) | 39, 188, 413 |
| BseMII | CTCAG | 1 cut(s) | 183 |
| BseNI | ACTGG | 3 cut(s) | 39, 188, 413 |
| BseXI | GCAGC | 1 cut(s) | 355 |
| BshFI | GGCC | 1 cut(s) | 309 |
| BsnI | GGCC | 1 cut(s) | 309 |
| Bsp1407I | TGTACA | 1 cut(s) | 17 |
| Bsp143I | GATC | 1 cut(s) | 508 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 192 |
| BspACI | CCGC | 2 cut(s) | 82, 237 |
| BspANI | GGCC | 1 cut(s) | 309 |
| BspCNI | CTCAG | 1 cut(s) | 184 |
| BspLI | GGNNCC | 1 cut(s) | 420 |
| BspMI | ACCTGC | 1 cut(s) | 211 |
| BsrGI | TGTACA | 1 cut(s) | 17 |
| BsrI | ACTGG | 3 cut(s) | 39, 188, 413 |
| BssMI | GATC | 1 cut(s) | 508 |
| BssNI | GRCGYC | 1 cut(s) | 365 |
| Bst6I | CTCTTC | 2 cut(s) | 298, 408 |
| BstACI | GRCGYC | 1 cut(s) | 365 |
| BstAUI | TGTACA | 1 cut(s) | 17 |
| BstC8I | GCNNGC | 1 cut(s) | 97 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstHHI | GCGC | 2 cut(s) | 155, 208 |
| BstKTI | GATC | 1 cut(s) | 511 |
| BstMBI | GATC | 1 cut(s) | 508 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 105, 214, 425 |
| BstNSI | RCATGY | 1 cut(s) | 438 |
| BstV1I | GCAGC | 1 cut(s) | 355 |
| BstV2I | GAAGAC | 1 cut(s) | 333 |
| BsuI | GTATCC | 1 cut(s) | 271 |
| BsuRI | GGCC | 1 cut(s) | 309 |
| BveI | ACCTGC | 1 cut(s) | 211 |
| Cac8I | GCNNGC | 1 cut(s) | 97 |
| CfoI | GCGC | 2 cut(s) | 155, 208 |
| Cfr13I | GGNCC | 1 cut(s) | 308 |
| CseI | GACGC | 1 cut(s) | 354 |
| Csp6I | GTAC | 2 cut(s) | 18, 432 |
| CviAII | CATG | 2 cut(s) | 161, 435 |
| CviJI | RGCY | 6 cut(s) | 95, 130, 138, 196, 309, 419 |
| CviKI_1 | RGCY | 6 cut(s) | 95, 130, 138, 196, 309, 419 |
| CviQI | GTAC | 2 cut(s) | 18, 432 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| DpnI | GATC | 1 cut(s) | 510 |
| DpnII | GATC | 1 cut(s) | 508 |
| Eam1104I | CTCTTC | 2 cut(s) | 298, 408 |
| EarI | CTCTTC | 2 cut(s) | 298, 408 |
| EcoO109I | RGGNCCY | 1 cut(s) | 308 |
| EcoRI | GAATTC | 1 cut(s) | 484 |
| FaeI | CATG | 2 cut(s) | 164, 438 |
| FaiI | YATR | 5 cut(s) | 40, 162, 167, 244, 436 |
| FatI | CATG | 2 cut(s) | 160, 434 |
| FblI | GTMKAC | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 1 cut(s) | 344 |
| Fsp4HI | GCNGC | 1 cut(s) | 344 |
| FspI | TGCGCA | 1 cut(s) | 154 |
| GlaI | GCGC | 2 cut(s) | 154, 207 |
| GluI | GCNGC | 1 cut(s) | 344 |
| HaeIII | GGCC | 1 cut(s) | 309 |
| HgaI | GACGC | 1 cut(s) | 354 |
| HhaI | GCGC | 2 cut(s) | 155, 208 |
| Hin1I | GRCGYC | 1 cut(s) | 365 |
| Hin1II | CATG | 2 cut(s) | 164, 438 |
| Hin6I | GCGC | 2 cut(s) | 153, 206 |
| HinP1I | GCGC | 2 cut(s) | 153, 206 |
| HincII | GTYRAC | 3 cut(s) | 253, 369, 406 |
| HindII | GTYRAC | 3 cut(s) | 253, 369, 406 |
| HinfI | GANTC | 1 cut(s) | 351 |
| Hpy166II | GTNNAC | 3 cut(s) | 253, 369, 406 |
| Hpy188I | TCNGA | 1 cut(s) | 27 |
| Hpy8I | GTNNAC | 3 cut(s) | 253, 369, 406 |
| HpyAV | CCTTC | 5 cut(s) | 268, 285, 325, 383, 504 |
| HpyCH4V | TGCA | 3 cut(s) | 45, 169, 428 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 105, 214, 425 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| Hsp92I | GRCGYC | 1 cut(s) | 365 |
| Hsp92II | CATG | 2 cut(s) | 164, 438 |
| HspAI | GCGC | 2 cut(s) | 153, 206 |
| Kzo9I | GATC | 1 cut(s) | 508 |
| LmnI | GCTCC | 1 cut(s) | 424 |
| LpnPI | CCDG | 7 cut(s) | 20, 84, 169, 216, 267, 343, 394 |
| Lsp1109I | GCAGC | 1 cut(s) | 355 |
| MalI | GATC | 1 cut(s) | 510 |
| MboI | GATC | 1 cut(s) | 508 |
| MluCI | AATT | 3 cut(s) | 62, 461, 484 |
| MlyI | GAGTC | 1 cut(s) | 360 |
| MnlI | CCTC | 6 cut(s) | 114, 186, 236, 299, 321, 409 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 105, 214, 425 |
| NdeII | GATC | 1 cut(s) | 508 |
| NlaIII | CATG | 2 cut(s) | 164, 438 |
| NlaIV | GGNNCC | 1 cut(s) | 420 |
| NsbI | TGCGCA | 1 cut(s) | 154 |
| NspI | RCATGY | 1 cut(s) | 438 |
| PaqCI | CACCTGC | 1 cut(s) | 211 |
| PciI | ACATGT | 1 cut(s) | 434 |
| PkrI | GCNGC | 1 cut(s) | 345 |
| PleI | GAGTC | 1 cut(s) | 359 |
| PpsI | GAGTC | 1 cut(s) | 359 |
| PscI | ACATGT | 1 cut(s) | 434 |
| PspN4I | GGNNCC | 1 cut(s) | 420 |
| PspPI | GGNCC | 1 cut(s) | 308 |
| RsaI | GTAC | 2 cut(s) | 19, 433 |
| RsaNI | GTAC | 2 cut(s) | 18, 432 |
| SalI | GTCGAC | 1 cut(s) | 251 |
| SatI | GCNGC | 1 cut(s) | 344 |
| Sau3AI | GATC | 1 cut(s) | 508 |
| Sau96I | GGNCC | 1 cut(s) | 308 |
| SchI | GAGTC | 1 cut(s) | 360 |
| SetI | ASST | 5 cut(s) | 97, 178, 205, 362, 496 |
| Sse9I | AATT | 3 cut(s) | 62, 461, 484 |
| SsiI | CCGC | 2 cut(s) | 82, 237 |
| TaqI | TCGA | 2 cut(s) | 252, 504 |
| TaqII | GACCGA | 1 cut(s) | 286 |
| TasI | AATT | 3 cut(s) | 62, 461, 484 |
| TatI | WGTACW | 2 cut(s) | 17, 431 |
| TseI | GCWGC | 1 cut(s) | 343 |
| TspDTI | ATGAA | 3 cut(s) | 45, 231, 402 |
| XapI | RAATTY | 2 cut(s) | 62, 484 |
| XceI | RCATGY | 1 cut(s) | 438 |
| XmiI | GTMKAC | 1 cut(s) | 252 |