Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0006117

Physical Location & Seq

Genomic Coordinates Forward (+)

10312160 .. 10313911

Gene Structure 1752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g07310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGCGTCTCTCATGGCGATTCGACGCGCACGAAGCCCTTCGCTGTCTCCTTTCTTAAAGTTACGGCCTCTTCACCCTTCTCATTTCGCCTCCTTTCACGGCAACAACACCACCGCCATCCCAACCCTAACATCAGCGAAAACCCTAAGCACCTCCGCCGTCCCAAATGAGTACCCGAGGCCTCCTCAGCAGCAACCCCCGCCGTCCGATCCTAGGTATTTCAATGACCAGGCGAACCCTAACCAGTGGAGCCCAGAAGGTCAGGGATACGGCAACCCGAACCAGTGGAATTCGCAGACCCAGGGCCAGAGGCCTGGGAATCAGTTCAATTATCAGGGTCAGAACCAGAGCTATCCCAATCGGGGATATCCTAATCAGAGTTCGGACTATCCCAATCGCGGATATCCTAACCAGATTAACCAGAATCAGAGCTACCCACAACGCGGAAACTCGAATCAGTGGAGTCCGGCTCAGGGGCAGGGGCAGGGCACTCCTCAGTATCAAAACCCTAACCAGGTGAATCCTCCTCCTCCGAGCCCCAATTTTCAGCAACCCAGAAGCCCAAATCAGTGGAACAATCCCAATCAAGGATACCCACAACCTGGAAACCGTAATCAGTGGAGCCCACCAGCTCAAAACCCTAACCAGTGGAGCCCCCAACCTCAAAACCCTAATCAGTGGAGTCCACAACTTCAAAACCCTGCTCAGGCTGTGAATCAAACCCCGGAAGTTGTGCCCCGTTCGATCGATGATTTGAGGAGGTTGTGCCAAGAGGGAAAGGCTAAAGAAGCCCTTGAGTTGATGGATAAGGAAGGGGTCAAGGCTGATGCTGATTGCTTTCGTTCTTTGTTTGAGTTATGCGGGAGGTTGAAGTCGCTCGAGGACGCAAAAAAGGCTCATGATTTCTTTTTGCAGTCTACCTGCAGGGTTAATCGTGAGTTAATCCATAAAATCATTGAAATGTATGGAAAGTGTGCGAGCATGACTGATGCACGGAGAGTGTTCGATCATATGCTTGAGAAGAATATTGATTCTTGGCATTTAATGATTAATGGGTATGCGGATAATGGGTTAGGAGATGATGGATTGCAGATGTTTGAGGTGATGAGGGAGAAAGGGTTGCAACCCAATTCCGAAACTTTCCTTGCAGTATTCTCAGCTTGCGCTAGTGCAGATGCGGTGGAAGAAGCATTTATACATTTTGAGTCGATGAAAACTGAGTATGGAATTTCTCCAGGAGTGGAGCATTATATGGGAGTTTTAGATGTGCTTGGAAAATGTGGTCATCTTTACGAAGCAATTGATTATATTGAGAAGCTCCCATTTGAGGCTACAGTGCCGGTTTGGGAGGCATTGAAAAGTTATGCTCGGATTCATGGAGATATTGATCTTGAAGATCATGCTGAGGAGTTAATGGTTGCTCTTGACCCGTCAAAGGCTGTTGCGAATAAGATCCCAACTCCACCTCCGAAAAAGCATACTGCTATTAGCATGCTTGATGGGAAGAACAGAATTAGTGAGTTTAAAAATCCAACGCTCTACAAGGATGATGAGAAGTTAAAGGCTCTTGCTGCGATGAAAGGAGGAGGCTATGTGCCAGACACAAGATATGTCCTTCATGACATTGATCAGGAGGCTAAGGAGCAGGCCTTGCTTTATCATAGTGAGCGTTTGGCAATTGCGTATGGTCTCATCAGTACTCCGCCAAGGCAAACTCTTAGGATCGATCAAGAACCTCCGCGTCTGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

584

Amino Acids

65.72

Weight (kDa)

6.33

Isoelectric Point (pI)

49.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	342 - 389	2.4e-08	PPR repeat family
DYW_deaminase	PF14432	530 - 576	2.9e-12	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15690
fragaria_vesca	FvH4_2g06150
malus_domestica	MD05G1080000.v1.1
prunus_persica	Prupe.8G123800_v2.0.a1
pyrus_communis	pycom05g07310 pycom10g07740
rosa_chinensis	RchiOBHm_Chr6g0257041 RchiOBHm_Chr7g0228581
rosa_laevigata	RLG00000001553 RLG00000014672
rosa_multiflora	Rmu_sc0008871.1_g000003 Rmu_sc0011334.1_g000001 Rmu_sc0019183.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231050 Rroxscaffold_7G00208450
rosa_rugosa	Rorug05G0575600 Rorug07G0250600
rosa_samantha	Rh6AG093700 Rh6BG084500 Rh6CG081200 Rh6DG076600 Rh7AG402800 Rh7BG383700 Rh7CG422100 Rh7DG398500
rosa_wichuraiana	Rw6G008060 Rw7G033470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	929
AccB7I	CCANNNNNTGG	1 cut(s)	602
AccI	GTMKAC	1 cut(s)	917
AccII	CGCG	4 cut(s)	27, 399, 444, 1741
AclWI	GGATC	3 cut(s)	203, 1447, 1730
AcsI	RAATTY	2 cut(s)	289, 1227
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	2 cut(s)	173, 1699
AgsI	TTSAA	7 cut(s)	223, 328, 695, 871, 959, 1357, 1394
AjnI	CCWGG	6 cut(s)	228, 300, 313, 513, 601, 1234
AluBI	AGCT	5 cut(s)	351, 432, 632, 1160, 1318
AluI	AGCT	5 cut(s)	351, 432, 632, 1160, 1318
Alw26I	GTCTC	3 cut(s)	12, 51, 1694
AlwI	GGATC	3 cut(s)	203, 1447, 1730
Ama87I	CYCGRG	2 cut(s)	175, 878
AoxI	GGCC	5 cut(s)	65, 179, 304, 311, 1647
ApeKI	GCWGC	2 cut(s)	190, 1571
ApoI	RAATTY	2 cut(s)	289, 1227
AseI	ATTAAT	1 cut(s)	1050
Asp700I	GAANNNNTTC	2 cut(s)	37, 323
AspA2I	CCTAGG	1 cut(s)	212
AspLEI	GCGC	2 cut(s)	29, 1166
AspS9I	GGNCC	1 cut(s)	304
AsuC2I	CCSGG	1 cut(s)	725
AsuHPI	GGTGA	3 cut(s)	65, 529, 1114
AvaI	CYCGRG	2 cut(s)	175, 878
AvrII	CCTAGG	1 cut(s)	212
BaeGI	GKGCMC	2 cut(s)	491, 738
BanII	GRGCYC	4 cut(s)	254, 539, 626, 656
BarI	GAAGNNNNNNTAC	2 cut(s)	1179, 1211
BbvCI	CCTCAGC	2 cut(s)	186, 1404
BbvI	GCAGC	2 cut(s)	202, 1558
BccI	CCATC	4 cut(s)	125, 796, 1076, 1493
BceAI	ACGGC	5 cut(s)	80, 115, 143, 187, 286
BciT130I	CCWGG	6 cut(s)	230, 302, 315, 515, 603, 1236
BciVI	GTATCC	2 cut(s)	260, 584
BclI	TGATCA	1 cut(s)	1627
BcnI	CCSGG	1 cut(s)	725
BcoDI	GTCTC	3 cut(s)	12, 51, 1694
BfaI	CTAG	2 cut(s)	213, 1167
BfmI	CTRYAG	2 cut(s)	922, 1332
BfuAI	ACCTGC	1 cut(s)	929
BfuI	GTATCC	2 cut(s)	260, 584
BisI	GCNGC	2 cut(s)	191, 1572
BlnI	CCTAGG	1 cut(s)	212
BlsI	GCNGC	2 cut(s)	192, 1573
BmcAI	AGTACT	1 cut(s)	1699
Bme1390I	CCNGG	7 cut(s)	230, 302, 315, 515, 603, 725, 1236
BmeT110I	CYCGRG	2 cut(s)	175, 878
BmgT120I	GGNCC	1 cut(s)	304
BmiI	GGNNCC	3 cut(s)	251, 623, 653
BmrFI	CCNGG	7 cut(s)	230, 302, 315, 515, 603, 725, 1236
BmsI	GCATC	3 cut(s)	817, 979, 1165
BplI	GAGNNNNNCTC	4 cut(s)	169, 201, 454, 486
BpmI	CTGGAG	1 cut(s)	1218
Bpu10I	CCTNAGC	6 cut(s)	146, 186, 471, 705, 1404, 1638
BpuEI	CTTGAG	2 cut(s)	815, 1037
BpuMI	CCSGG	1 cut(s)	725
Bsa29I	ATCGAT	2 cut(s)	747, 1725
BsaBI	GATNNNNATC	1 cut(s)	1386
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1694
BsaJI	CCNNGG	7 cut(s)	176, 212, 300, 301, 314, 723, 1706
BsaXI	ACNNNNNCTCC	6 cut(s)	1103, 1133, 1450, 1480, 1578, 1608
Bse118I	RCCGGY	1 cut(s)	1339
Bse1I	ACTGG	3 cut(s)	244, 283, 646
Bse8I	GATNNNNATC	1 cut(s)	1386
BseBI	CCWGG	6 cut(s)	230, 302, 315, 515, 603, 1236
BseCI	ATCGAT	2 cut(s)	747, 1725
BseDI	CCNNGG	7 cut(s)	176, 212, 300, 301, 314, 723, 1706
BseGI	GGATG	2 cut(s)	117, 1552
BseJI	GATNNNNATC	1 cut(s)	1386
BseMII	CTCAG	7 cut(s)	200, 485, 509, 719, 1170, 1209, 1395
BseNI	ACTGG	3 cut(s)	244, 283, 646
BseRI	GAGGAG	7 cut(s)	174, 483, 516, 519, 772, 1421, 1599
BseSI	GKGCMC	2 cut(s)	491, 738
BseXI	GCAGC	2 cut(s)	202, 1558
BsgI	GTGCAG	1 cut(s)	1191
Bsh1236I	CGCG	4 cut(s)	27, 399, 444, 1741
Bsh1285I	CGRYCG	1 cut(s)	747
BshFI	GGCC	5 cut(s)	67, 181, 306, 313, 1649
BshVI	ATCGAT	2 cut(s)	747, 1725
BsiEI	CGRYCG	1 cut(s)	747
BsiHKCI	CYCGRG	2 cut(s)	175, 878
BsiSI	CCGG	3 cut(s)	467, 725, 1340
BslFI	GGGAC	1 cut(s)	146
BsmAI	GTCTC	3 cut(s)	12, 51, 1694
BsmBI	CGTCTC	1 cut(s)	12
BsmFI	GGGAC	1 cut(s)	146
BsnI	GGCC	5 cut(s)	67, 181, 306, 313, 1649
Bso31I	GGTCTC	1 cut(s)	1694
BsoBI	CYCGRG	2 cut(s)	175, 878
Bsp1286I	GDGCHC	6 cut(s)	254, 491, 539, 626, 656, 738
Bsp143I	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
BspANI	GGCC	5 cut(s)	67, 181, 306, 313, 1649
BspCNI	CTCAG	7 cut(s)	199, 484, 508, 718, 1169, 1210, 1396
BspDI	ATCGAT	2 cut(s)	747, 1725
BspFNI	CGCG	4 cut(s)	27, 399, 444, 1741
BspHI	TCATGA	2 cut(s)	898, 1618
BspLI	GGNNCC	3 cut(s)	251, 623, 653
BspMAI	CTGCAG	1 cut(s)	926
BspMI	ACCTGC	1 cut(s)	929
BspPI	GGATC	3 cut(s)	203, 1447, 1730
BspTNI	GGTCTC	1 cut(s)	1694
BsrFI	RCCGGY	1 cut(s)	1339
BsrI	ACTGG	3 cut(s)	244, 283, 646
BssAI	RCCGGY	1 cut(s)	1339
BssECI	CCNNGG	7 cut(s)	176, 212, 300, 301, 314, 723, 1706
BssMI	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	212, 1706
Bst2UI	CCWGG	6 cut(s)	230, 302, 315, 515, 603, 1236
Bst4CI	ACNGT	2 cut(s)	611, 1336
Bst6I	CTCTTC	1 cut(s)	75
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	1651
BstC8I	GCNNGC	4 cut(s)	979, 1162, 1493, 1647
BstF5I	GGATG	2 cut(s)	117, 1552
BstFNI	CGCG	4 cut(s)	27, 399, 444, 1741
BstHHI	GCGC	2 cut(s)	29, 1166
BstKTI	GATC	9 cut(s)	211, 747, 1009, 1390, 1399, 1455, 1630, 1725, 1729
BstMAI	GTCTC	3 cut(s)	12, 51, 1694
BstMBI	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
BstMCI	CGRYCG	1 cut(s)	747
BstMWI	GCNNNNNNNGC	7 cut(s)	33, 187, 199, 788, 893, 1571, 1651
BstNI	CCWGG	6 cut(s)	230, 302, 315, 515, 603, 1236
BstNSI	RCATGY	1 cut(s)	1495
BstSCI	CCNGG	7 cut(s)	228, 300, 313, 513, 601, 723, 1234
BstSFI	CTRYAG	2 cut(s)	922, 1332
BstSLI	GKGCMC	2 cut(s)	491, 738
BstUI	CGCG	4 cut(s)	27, 399, 444, 1741
BstV1I	GCAGC	2 cut(s)	202, 1558
BstX2I	RGATCY	1 cut(s)	1452
BstXI	CCANNNNNNTGG	2 cut(s)	314, 570
BstYI	RGATCY	1 cut(s)	1452
Bsu15I	ATCGAT	2 cut(s)	747, 1725
BsuI	GTATCC	2 cut(s)	260, 584
BsuRI	GGCC	5 cut(s)	67, 181, 306, 313, 1649
BsuTUI	ATCGAT	2 cut(s)	747, 1725
BtgZI	GCGATG	1 cut(s)	1589
BtsCI	GGATG	2 cut(s)	117, 1552
BtsIMutI	CAGTG	8 cut(s)	251, 290, 464, 575, 623, 653, 683, 1341
BveI	ACCTGC	1 cut(s)	929
Cac8I	GCNNGC	4 cut(s)	979, 1162, 1493, 1647
CciI	TCATGA	2 cut(s)	898, 1618
CfoI	GCGC	2 cut(s)	29, 1166
Cfr10I	RCCGGY	1 cut(s)	1339
Cfr13I	GGNCC	1 cut(s)	304
ClaI	ATCGAT	2 cut(s)	747, 1725
CseI	GACGC	3 cut(s)	33, 893, 1730
CsiI	ACCWGGT	1 cut(s)	513
Csp6I	GTAC	2 cut(s)	172, 1698
CviAII	CATG	7 cut(s)	13, 899, 982, 1376, 1400, 1492, 1619
CviQI	GTAC	2 cut(s)	172, 1698
DpnI	GATC	9 cut(s)	210, 746, 1008, 1389, 1398, 1454, 1629, 1724, 1728
DpnII	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
DraI	TTTAAA	1 cut(s)	1525
Eam1104I	CTCTTC	1 cut(s)	75
EarI	CTCTTC	1 cut(s)	75
EciI	GGCGGA	2 cut(s)	145, 1692
Eco130I	CCWWGG	2 cut(s)	212, 1706
Eco147I	AGGCCT	3 cut(s)	181, 313, 1649
Eco24I	GRGCYC	4 cut(s)	254, 539, 626, 656
Eco31I	GGTCTC	1 cut(s)	1694
Eco32I	GATATC	2 cut(s)	368, 404
Eco88I	CYCGRG	2 cut(s)	175, 878
EcoRI	GAATTC	1 cut(s)	289
EcoRII	CCWGG	6 cut(s)	228, 300, 313, 513, 601, 1234
EcoRV	GATATC	2 cut(s)	368, 404
EcoT14I	CCWWGG	2 cut(s)	212, 1706
EcoT38I	GRGCYC	4 cut(s)	254, 539, 626, 656
ErhI	CCWWGG	2 cut(s)	212, 1706
Esp3I	CGTCTC	1 cut(s)	12
FaeI	CATG	7 cut(s)	16, 902, 985, 1379, 1403, 1495, 1622
FalI	AAGNNNNNCTT	2 cut(s)	777, 809
FaqI	GGGAC	1 cut(s)	146
FatI	CATG	7 cut(s)	12, 898, 981, 1375, 1399, 1491, 1618
FauI	CCCGC	2 cut(s)	207, 854
FauNDI	CATATG	1 cut(s)	1011
FbaI	TGATCA	1 cut(s)	1627
FblI	GTMKAC	1 cut(s)	917
Fnu4HI	GCNGC	2 cut(s)	191, 1572
FokI	GGATG	2 cut(s)	104, 1559
FriOI	GRGCYC	4 cut(s)	254, 539, 626, 656
Fsp4HI	GCNGC	2 cut(s)	191, 1572
FspBI	CTAG	2 cut(s)	213, 1167
GlaI	GCGC	2 cut(s)	28, 1165
GluI	GCNGC	2 cut(s)	191, 1572
GsuI	CTGGAG	1 cut(s)	1218
HaeIII	GGCC	5 cut(s)	67, 181, 306, 313, 1649
HapII	CCGG	3 cut(s)	467, 725, 1340
HgaI	GACGC	3 cut(s)	33, 893, 1730
HhaI	GCGC	2 cut(s)	29, 1166
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	7 cut(s)	16, 902, 985, 1379, 1403, 1495, 1622
Hin6I	GCGC	2 cut(s)	27, 1164
HinP1I	GCGC	2 cut(s)	27, 1164
HpaII	CCGG	3 cut(s)	467, 725, 1340
HphI	GGTGA	3 cut(s)	65, 529, 1114
Hpy166II	GTNNAC	2 cut(s)	686, 918
Hpy188I	TCNGA	9 cut(s)	208, 342, 378, 385, 429, 534, 1135, 1371, 1470
Hpy188III	TCNNGA	7 cut(s)	899, 935, 1391, 1424, 1619, 1631, 1730
Hpy8I	GTNNAC	2 cut(s)	686, 918
Hpy99I	CGWCG	1 cut(s)	27
HpyAV	CCTTC	5 cut(s)	48, 87, 251, 806, 1625
HpyCH4III	ACNGT	2 cut(s)	611, 1336
HpyCH4V	TGCA	7 cut(s)	913, 924, 992, 1090, 1123, 1148, 1172
HpyF10VI	GCNNNNNNNGC	7 cut(s)	33, 187, 199, 788, 893, 1571, 1651
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	7 cut(s)	16, 902, 985, 1379, 1403, 1495, 1622
HspAI	GCGC	2 cut(s)	27, 1164
Ksp22I	TGATCA	1 cut(s)	1627
Kzo9I	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
LmnI	GCTCC	6 cut(s)	249, 621, 651, 1243, 1323, 1642
Lsp1109I	GCAGC	2 cut(s)	202, 1558
LweI	GCATC	3 cut(s)	817, 979, 1165
MabI	ACCWGGT	1 cut(s)	513
MaeI	CTAG	2 cut(s)	213, 1167
MaeIII	GTNAC	1 cut(s)	60
MalI	GATC	9 cut(s)	210, 746, 1008, 1389, 1398, 1454, 1629, 1724, 1728
MboI	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
MboII	GAAGA	5 cut(s)	62, 1033, 1196, 1406, 1516
MfeI	CAATTG	2 cut(s)	1299, 1677
MflI	RGATCY	1 cut(s)	1452
MhlI	GDGCHC	6 cut(s)	254, 491, 539, 626, 656, 738
MluCI	AATT	8 cut(s)	289, 328, 541, 1129, 1227, 1299, 1512, 1677
MlyI	GAGTC	3 cut(s)	472, 691, 1214
MmeI	TCCRAC	1 cut(s)	1556
MroXI	GAANNNNTTC	2 cut(s)	37, 323
MseI	TTAA	9 cut(s)	56, 417, 930, 941, 1043, 1050, 1412, 1524, 1559
MslI	CAYNNNNRTG	1 cut(s)	959
MspI	CCGG	3 cut(s)	467, 725, 1340
MspR9I	CCNGG	7 cut(s)	230, 302, 315, 515, 603, 725, 1236
MunI	CAATTG	2 cut(s)	1299, 1677
MvaI	CCWGG	6 cut(s)	230, 302, 315, 515, 603, 1236
MvnI	CGCG	4 cut(s)	27, 399, 444, 1741
MwoI	GCNNNNNNNGC	7 cut(s)	33, 187, 199, 788, 893, 1571, 1651
NciI	CCSGG	1 cut(s)	725
NdeI	CATATG	1 cut(s)	1011
NdeII	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
NlaIII	CATG	7 cut(s)	16, 902, 985, 1379, 1403, 1495, 1622
NlaIV	GGNNCC	3 cut(s)	251, 623, 653
NspI	RCATGY	1 cut(s)	1495
PaeI	GCATGC	1 cut(s)	1495
PaeR7I	CTCGAG	1 cut(s)	878
PagI	TCATGA	2 cut(s)	898, 1618
PasI	CCCWGGG	1 cut(s)	301
PceI	AGGCCT	3 cut(s)	181, 313, 1649
PcsI	WCGNNNNNNNCGW	1 cut(s)	28
PdmI	GAANNNNTTC	2 cut(s)	37, 323
PfeI	GAWTC	8 cut(s)	19, 319, 424, 454, 520, 715, 1031, 1372
PflMI	CCANNNNNTGG	1 cut(s)	602
PfoI	TCCNGGA	1 cut(s)	1234
PkrI	GCNGC	2 cut(s)	192, 1573
Ple19I	CGATCG	1 cut(s)	747
PleI	GAGTC	3 cut(s)	471, 690, 1213
PpsI	GAGTC	3 cut(s)	471, 690, 1213
PshBI	ATTAAT	1 cut(s)	1050
Psp6I	CCWGG	6 cut(s)	228, 300, 313, 513, 601, 1234
PspGI	CCWGG	6 cut(s)	228, 300, 313, 513, 601, 1234
PspN4I	GGNNCC	3 cut(s)	251, 623, 653
PspPI	GGNCC	1 cut(s)	304
PspXI	VCTCGAGB	1 cut(s)	878
PstI	CTGCAG	1 cut(s)	926
PsuI	RGATCY	1 cut(s)	1452
PvuI	CGATCG	1 cut(s)	747
RsaI	GTAC	2 cut(s)	173, 1699
RsaNI	GTAC	2 cut(s)	172, 1698
RseI	CAYNNNNRTG	1 cut(s)	959
SaqAI	TTAA	9 cut(s)	56, 417, 930, 941, 1043, 1050, 1412, 1524, 1559
SatI	GCNGC	2 cut(s)	191, 1572
Sau3AI	GATC	9 cut(s)	208, 744, 1006, 1387, 1396, 1452, 1627, 1722, 1726
Sau96I	GGNCC	1 cut(s)	304
SbfI	CCTGCAGG	1 cut(s)	926
ScaI	AGTACT	1 cut(s)	1699
SchI	GAGTC	3 cut(s)	472, 691, 1214
ScrFI	CCNGG	7 cut(s)	230, 302, 315, 515, 603, 725, 1236
SdaI	CCTGCAGG	1 cut(s)	926
SduI	GDGCHC	6 cut(s)	254, 491, 539, 626, 656, 738
SexAI	ACCWGGT	1 cut(s)	513
SfaNI	GCATC	3 cut(s)	817, 979, 1165
SfcI	CTRYAG	2 cut(s)	922, 1332
Sfr274I	CTCGAG	1 cut(s)	878
SlaI	CTCGAG	1 cut(s)	878
SmiMI	CAYNNNNRTG	1 cut(s)	959
SmlI	CTYRAG	3 cut(s)	794, 878, 1016
SmoI	CTYRAG	3 cut(s)	794, 878, 1016
SphI	GCATGC	1 cut(s)	1495
Sse8387I	CCTGCAGG	1 cut(s)	926
Sse9I	AATT	8 cut(s)	289, 328, 541, 1129, 1227, 1299, 1512, 1677
SseBI	AGGCCT	3 cut(s)	181, 313, 1649
SspI	AATATT	1 cut(s)	1027
SspMI	CTAG	2 cut(s)	213, 1167
StuI	AGGCCT	3 cut(s)	181, 313, 1649
StyD4I	CCNGG	7 cut(s)	228, 300, 313, 513, 601, 723, 1234
StyI	CCWWGG	2 cut(s)	212, 1706
TaaI	ACNGT	2 cut(s)	611, 1336
TaqI	TCGA	8 cut(s)	22, 452, 743, 747, 879, 1005, 1208, 1725
TasI	AATT	8 cut(s)	289, 328, 541, 1129, 1227, 1299, 1512, 1677
TatI	WGTACW	1 cut(s)	1697
TfiI	GAWTC	8 cut(s)	19, 319, 424, 454, 520, 715, 1031, 1372
Tru1I	TTAA	9 cut(s)	56, 417, 930, 941, 1043, 1050, 1412, 1524, 1559
Tru9I	TTAA	9 cut(s)	56, 417, 930, 941, 1043, 1050, 1412, 1524, 1559
TscAI	CASTG	8 cut(s)	251, 290, 464, 575, 623, 653, 683, 1341
TseI	GCWGC	2 cut(s)	190, 1571
TspDTI	ATGAA	4 cut(s)	1226, 1364, 1592, 1607
TspGWI	ACGGA	1 cut(s)	1009
TspRI	CASTG	8 cut(s)	251, 290, 464, 575, 623, 653, 683, 1341
Van91I	CCANNNNNTGG	1 cut(s)	602
VspI	ATTAAT	1 cut(s)	1050
XapI	RAATTY	2 cut(s)	289, 1227
XceI	RCATGY	1 cut(s)	1495
XhoI	CTCGAG	1 cut(s)	878
XmaJI	CCTAGG	1 cut(s)	212
XmiI	GTMKAC	1 cut(s)	917
XmnI	GAANNNNTTC	2 cut(s)	37, 323
XspI	CTAG	2 cut(s)	213, 1167
ZrmI	AGTACT	1 cut(s)	1699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.