Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0006117

Physical Location & Seq

Genomic Coordinates Reverse (-)

77148158 .. 77161595

Gene Structure 13438 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0575600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGCCTCGATCCCTCGAACAACTGAAGCTCGTCGCTGGAAGTATGACGTGTATTTGAGTTACTGGGATCTTGACACTCGAAGGGGTTTTACATCTCATTTATACGGTGGTCTGCAGAGGAGGGGAATTAAAACATTCATGGGTTATCAAGATCTTCAAGTAGGGGATGAGATTTATCCCACTCTCCTAAAGGTAATCGAAGGATCAAGGTTGGCAATTGTTGTTCTGTCCCAAAATTATGCTTCTTCTGCTTGGTGTTTGGATGAACTTACAAAGATTTGTCAGTTCATGGAGGACGGCCACAGAATTCTTCCAGTTTTTTATGATGTCAAGCCTAGTGATGTAAAAAATCAAAAGAGGAGTCTTGAAGATGCTTTCACCAAGCATGAGCGATTCGAATCGGAGAAGGTCGAGCAGTGGAGAGATGCTTTAAGAAAAGTGGCCGACTTCGCTGGGTTGGTTCCAAAATACAGGACTGAGCAAGATCTTGTCGAAGCTACTGTGGACTTTGTGTACAGTAGACTACAACACGTTGTGGAAATCAACACTGGAGATTTTGAAGCAACAAGGCAAGCCACTACTGAAATTGAACCTGCAATCTCTCGACAAACTGTTGCATCTCTTCCTTCATCAGCTGAACCATCATCAACAGCTGGTCAGTGGAAGTATGACGTGTATTTGAGTTTCTTGGGTGCAGATACTCGAAACAGTTTTACAGATCATTTATACCATGGGCTGCAACATAGTGGACTCTCAATGAATCAACATCTTGAACGAGAGCACCCCATTTCTCCCTCTCTCGTGGAGGCAATTGAAGAATCAAGAATTCTTCCAATTTTTTATAATGTGGCAAACGTTGATGTACGGTACTGCAAGACGAGTTTCGAAAAAGCTTTCCAAGAGCATGAAAGCTCTGGGCGACACACATCAGACAAGATAAAGGGCTGGAAAGATGCTTCAAACCATGTAGTCAGTCTCTGCGGGTGGCAGACAAAGAATTATAAGACTGATAGAGAACTTGTGGAGACAATTGTGGATTTTGTGTGCCGTCAAGTAAAACCTATTGAAATTGGGTTTACAATCTCTACTAATTGGAAAAAGGGTCATCTTCTCGGCAGCGGCTCCTTCGGGTCTGTGTATGAAGGAATTTCTGATGGCGGATGCTTCATTGCTGTCAAGGAAGTTTCCTTGCTTGATCAAGGAAAAGTTTCTCAACTTGAACAGGAGATTGCTCTTCTGAGTCAATGTAAACATGAGAACATAGTTCAGTATTATGGCACACAAAAGGATGAATCAAAGCTCTACATCTTTCTGGAACTTGTAACCAAAGGCTCCCTTCAAAAGCTATATCAAACGTACCCTCTTACAGATTTGCATGTCTCTGTATACACTAGACAGATCTTGCAAGGTCTGAAGTATCTTCACGGCCAAAATGTGATTCACAGGGACATTAAATGCGCAAATATTTTGGTGCATGCTAATGGATCTGTGAAGCTTGCAGACTTTGGCTTGGCAAAGACTATCAAAATGAACGATATAATATCTTGCCGAGGAACTGCAAACTGGATGGCCCCTGAGGTTGTTGAACCTGAAAATCCAGGTTATGGCCTTCCAGCTGATATATGGAGTCTTGGATGTACTGTGTTGGAGATGTTAACTAGGATGGTTCCATACCCTAATCTCGAATGGATGGCGGCATTATGGAAAATTATGAAGGGGGAGCCCCCTCTGGTTCCTGATTCTCTTTCAAGGGAGGCACAAGATTTTATCCATCTATGCTTACAAGTTGAGCCAGATAATCGTCCCACTGCTGCTCAGCTTTTAAAACATCCATTTGTAAATAAGCCCCTTCCTCCCACGTCTTCTGGATCAGTATCTCCTTACAATCACTACAGGAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

634

Amino Acids

72.02

Weight (kDa)

6.33

Isoelectric Point (pI)

42.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	14 - 180	2.2e-41	TIR domain
TIR_2	PF13676	17 - 137	3e-13	TIR domain
TIR	PF01582	222 - 276	1.5e-08	TIR domain
TIR	PF01582	276 - 352	7e-07	TIR domain
Pkinase	PF00069	366 - 613	1.8e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	368 - 609	4.4e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15690
fragaria_vesca	FvH4_2g06150
malus_domestica	MD05G1080000.v1.1
prunus_persica	Prupe.8G123800_v2.0.a1
pyrus_communis	pycom05g07310 pycom10g07740
rosa_chinensis	RchiOBHm_Chr6g0257041 RchiOBHm_Chr7g0228581
rosa_laevigata	RLG00000001553 RLG00000014672
rosa_multiflora	Rmu_sc0008871.1_g000003 Rmu_sc0011334.1_g000001 Rmu_sc0019183.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231050 Rroxscaffold_7G00208450
rosa_rugosa	Rorug05G0575600 Rorug07G0250600
rosa_samantha	Rh6AG093700 Rh6BG084500 Rh6CG081200 Rh6DG076600 Rh7AG402800 Rh7BG383700 Rh7CG422100 Rh7DG398500
rosa_wichuraiana	Rw6G008060 Rw7G033470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	843, 1002
Acc16I	TGCGCA	1 cut(s)	1459
Acc36I	ACCTGC	1 cut(s)	601
AccB7I	CCANNNNNTGG	1 cut(s)	1604
AccI	GTMKAC	2 cut(s)	520, 1386
AciI	CCGC	4 cut(s)	981, 1119, 1158, 1694
AclI	AACGTT	1 cut(s)	855
AclWI	GGATC	5 cut(s)	4, 75, 211, 1492, 1876
AcoI	YGGCCR	3 cut(s)	298, 441, 1426
AcsI	RAATTY	3 cut(s)	306, 825, 1146
AcuI	CTGAAG	2 cut(s)	45, 1433
AdeI	CACNNNGTG	1 cut(s)	535
AfaI	GTAC	5 cut(s)	515, 864, 869, 1358, 1639
AfiI	CCNNNNNNNGG	1 cut(s)	1604
AflIII	ACRYGT	3 cut(s)	48, 529, 672
AjiI	CACGTC	3 cut(s)	49, 673, 1860
AjnI	CCWGG	1 cut(s)	1597
AjuI	GAANNNNNNNTTGG	2 cut(s)	1422, 1454
Alw21I	GWGCWC	1 cut(s)	783
Alw26I	GTCTC	3 cut(s)	980, 1019, 1384
AlwI	GGATC	5 cut(s)	4, 75, 211, 1492, 1876
AlwNI	CAGNNNCTG	1 cut(s)	978
AoxI	GGCC	6 cut(s)	3, 298, 441, 1426, 1569, 1606
ApeKI	GCWGC	3 cut(s)	736, 1116, 1811
ApoI	RAATTY	3 cut(s)	306, 825, 1146
ArsI	GACNNNNNNTTYG	2 cut(s)	346, 378
Asp700I	GAANNNNTTC	1 cut(s)	1207
AspLEI	GCGC	1 cut(s)	1460
AspS9I	GGNCC	1 cut(s)	1570
AsuHPI	GGTGA	1 cut(s)	370
AsuII	TTCGAA	2 cut(s)	396, 885
AxyI	CCTNAGG	1 cut(s)	1575
BanII	GRGCYC	1 cut(s)	1725
BarI	GAAGNNNNNNTAC	2 cut(s)	73, 105
BauI	CACGAG	1 cut(s)	800
BbsI	GAAGAC	1 cut(s)	1854
Bbv12I	GWGCWC	1 cut(s)	783
BbvI	GCAGC	3 cut(s)	723, 1128, 1798
BccI	CCATC	6 cut(s)	649, 1148, 1561, 1657, 1684, 1779
BceAI	ACGGC	3 cut(s)	313, 1032, 1441
BciT130I	CCWGG	1 cut(s)	1599
BclI	TGATCA	1 cut(s)	1195
BcoDI	GTCTC	3 cut(s)	980, 1019, 1384
BfaI	CTAG	3 cut(s)	336, 1392, 1659
BfmI	CTRYAG	2 cut(s)	113, 1891
BfuAI	ACCTGC	1 cut(s)	601
BglII	AGATCT	3 cut(s)	151, 484, 1398
BisI	GCNGC	5 cut(s)	737, 1117, 1120, 1695, 1812
BlpI	GCTNAGC	1 cut(s)	1815
BlsI	GCNGC	5 cut(s)	738, 1118, 1121, 1696, 1813
Bme1390I	CCNGG	1 cut(s)	1599
BmgBI	CACGTC	3 cut(s)	49, 673, 1860
BmgT120I	GGNCC	1 cut(s)	1570
BmiI	GGNNCC	7 cut(s)	462, 1123, 1333, 1572, 1668, 1722, 1734
BmrFI	CCNGG	1 cut(s)	1599
BmrI	ACTGGG	1 cut(s)	73
BmsI	GCATC	5 cut(s)	361, 415, 626, 943, 1151
BmuI	ACTGGG	1 cut(s)	73
BpiI	GAAGAC	1 cut(s)	1854
BpmI	CTGGAG	1 cut(s)	570
Bpu1102I	GCTNAGC	1 cut(s)	1815
Bpu14I	TTCGAA	2 cut(s)	396, 885
BsaBI	GATNNNNATC	2 cut(s)	397, 1873
BsaJI	CCNNGG	2 cut(s)	730, 1549
Bsc4I	CCNNNNNNNGG	1 cut(s)	1604
Bse1I	ACTGG	4 cut(s)	68, 314, 553, 1568
Bse21I	CCTNAGG	1 cut(s)	1575
Bse3DI	GCAATG	1 cut(s)	1167
Bse8I	GATNNNNATC	2 cut(s)	397, 1873
BseBI	CCWGG	1 cut(s)	1599
BseDI	CCNNGG	2 cut(s)	730, 1549
BseGI	GGATG	9 cut(s)	172, 268, 1166, 1294, 1572, 1640, 1668, 1695, 1828
BseJI	GATNNNNATC	2 cut(s)	397, 1873
BseLI	CCNNNNNNNGG	1 cut(s)	1604
BseMI	GCAATG	1 cut(s)	1167
BseMII	CTCAG	4 cut(s)	468, 1229, 1566, 1829
BseNI	ACTGG	4 cut(s)	68, 314, 553, 1568
BseRI	GAGGAG	2 cut(s)	133, 373
BseXI	GCAGC	3 cut(s)	723, 1128, 1798
BseYI	CCCAGC	1 cut(s)	452
BsgI	GTGCAG	1 cut(s)	714
BshFI	GGCC	6 cut(s)	5, 300, 443, 1428, 1571, 1608
BsiHKAI	GWGCWC	1 cut(s)	783
BslFI	GGGAC	3 cut(s)	214, 1460, 1788
BslI	CCNNNNNNNGG	1 cut(s)	1604
BsmAI	GTCTC	3 cut(s)	980, 1019, 1384
BsmFI	GGGAC	3 cut(s)	214, 1460, 1788
BsnI	GGCC	6 cut(s)	5, 300, 443, 1428, 1571, 1608
Bsp119I	TTCGAA	2 cut(s)	396, 885
Bsp1286I	GDGCHC	2 cut(s)	783, 1725
Bsp1407I	TGTACA	1 cut(s)	513
Bsp1720I	GCTNAGC	1 cut(s)	1815
Bsp19I	CCATGG	1 cut(s)	730
BspACI	CCGC	4 cut(s)	981, 1119, 1158, 1694
BspANI	GGCC	6 cut(s)	5, 300, 443, 1428, 1571, 1608
BspCNI	CTCAG	4 cut(s)	469, 1230, 1567, 1828
BspLI	GGNNCC	7 cut(s)	462, 1123, 1333, 1572, 1668, 1722, 1734
BspMAI	CTGCAG	1 cut(s)	117
BspMI	ACCTGC	1 cut(s)	601
BspPI	GGATC	5 cut(s)	4, 75, 211, 1492, 1876
BspQI	GCTCTTC	1 cut(s)	1239
BspT104I	TTCGAA	2 cut(s)	396, 885
BsrDI	GCAATG	1 cut(s)	1167
BsrGI	TGTACA	1 cut(s)	513
BsrI	ACTGG	4 cut(s)	68, 314, 553, 1568
BssECI	CCNNGG	2 cut(s)	730, 1549
BssNAI	GTATAC	1 cut(s)	1387
BssSI	CACGAG	1 cut(s)	800
BssT1I	CCWWGG	1 cut(s)	730
Bst1107I	GTATAC	1 cut(s)	1387
Bst2BI	CACGAG	1 cut(s)	800
Bst2UI	CCWGG	1 cut(s)	1599
Bst4CI	ACNGT	7 cut(s)	107, 502, 518, 613, 710, 867, 1642
Bst6I	CTCTTC	3 cut(s)	627, 1239, 1892
BstAUI	TGTACA	1 cut(s)	513
BstBI	TTCGAA	2 cut(s)	396, 885
BstC8I	GCNNGC	3 cut(s)	573, 1476, 1497
BstDEI	CTNAG	4 cut(s)	477, 1238, 1575, 1815
BstDSI	CCRYGG	1 cut(s)	730
BstF5I	GGATG	9 cut(s)	172, 268, 1166, 1294, 1572, 1640, 1668, 1695, 1828
BstHHI	GCGC	1 cut(s)	1460
BstMAI	GTCTC	3 cut(s)	980, 1019, 1384
BstMWI	GCNNNNNNNGC	2 cut(s)	248, 449
BstNI	CCWGG	1 cut(s)	1599
BstNSI	RCATGY	2 cut(s)	1379, 1478
BstSCI	CCNGG	1 cut(s)	1597
BstSFI	CTRYAG	2 cut(s)	113, 1891
BstV1I	GCAGC	3 cut(s)	723, 1128, 1798
BstV2I	GAAGAC	1 cut(s)	1854
BstX2I	RGATCY	5 cut(s)	67, 151, 484, 1398, 1484
BstYI	RGATCY	5 cut(s)	67, 151, 484, 1398, 1484
BstZ17I	GTATAC	1 cut(s)	1387
Bsu36I	CCTNAGG	1 cut(s)	1575
BsuRI	GGCC	6 cut(s)	5, 300, 443, 1428, 1571, 1608
BtgI	CCRYGG	1 cut(s)	730
BtrI	CACGTC	3 cut(s)	49, 673, 1860
BtsCI	GGATG	9 cut(s)	172, 268, 1166, 1294, 1572, 1640, 1668, 1695, 1828
BtsI	GCAGTG	2 cut(s)	422, 1806
BtsIMutI	CAGTG	4 cut(s)	422, 546, 665, 1806
BveI	ACCTGC	1 cut(s)	601
Cac8I	GCNNGC	3 cut(s)	573, 1476, 1497
CaiI	CAGNNNCTG	1 cut(s)	978
CfoI	GCGC	1 cut(s)	1460
Cfr13I	GGNCC	1 cut(s)	1570
Csp6I	GTAC	5 cut(s)	514, 863, 868, 1357, 1638
CviAII	CATG	9 cut(s)	139, 289, 386, 731, 905, 965, 1253, 1376, 1475
CviQI	GTAC	5 cut(s)	514, 863, 868, 1357, 1638
DdeI	CTNAG	4 cut(s)	477, 1238, 1575, 1815
DraI	TTTAAA	1 cut(s)	1824
DraIII	CACNNNGTG	1 cut(s)	535
EaeI	YGGCCR	3 cut(s)	298, 441, 1426
Eam1104I	CTCTTC	3 cut(s)	627, 1239, 1892
EarI	CTCTTC	3 cut(s)	627, 1239, 1892
EciI	GGCGGA	1 cut(s)	1173
Eco130I	CCWWGG	1 cut(s)	730
Eco24I	GRGCYC	1 cut(s)	1725
Eco57I	CTGAAG	2 cut(s)	45, 1433
Eco81I	CCTNAGG	1 cut(s)	1575
EcoRI	GAATTC	2 cut(s)	306, 825
EcoRII	CCWGG	1 cut(s)	1597
EcoT14I	CCWWGG	1 cut(s)	730
EcoT38I	GRGCYC	1 cut(s)	1725
ErhI	CCWWGG	1 cut(s)	730
FaeI	CATG	9 cut(s)	142, 292, 389, 734, 908, 968, 1256, 1379, 1478
FalI	AAGNNNNNCTT	2 cut(s)	1320, 1352
FaqI	GGGAC	3 cut(s)	214, 1460, 1788
FatI	CATG	9 cut(s)	138, 288, 385, 730, 904, 964, 1252, 1375, 1474
FauI	CCCGC	1 cut(s)	974
FbaI	TGATCA	1 cut(s)	1195
FblI	GTMKAC	2 cut(s)	520, 1386
Fnu4HI	GCNGC	5 cut(s)	737, 1117, 1120, 1695, 1812
FokI	GGATG	9 cut(s)	179, 275, 1173, 1301, 1579, 1647, 1675, 1702, 1815
FriOI	GRGCYC	1 cut(s)	1725
Fsp4HI	GCNGC	5 cut(s)	737, 1117, 1120, 1695, 1812
FspBI	CTAG	3 cut(s)	336, 1392, 1659
FspI	TGCGCA	1 cut(s)	1459
GlaI	GCGC	1 cut(s)	1459
GluI	GCNGC	5 cut(s)	737, 1117, 1120, 1695, 1812
GsaI	CCCAGC	1 cut(s)	456
GsuI	CTGGAG	1 cut(s)	570
HaeIII	GGCC	6 cut(s)	5, 300, 443, 1428, 1571, 1608
HhaI	GCGC	1 cut(s)	1460
Hin1II	CATG	9 cut(s)	142, 292, 389, 734, 908, 968, 1256, 1379, 1478
Hin6I	GCGC	1 cut(s)	1458
HinP1I	GCGC	1 cut(s)	1458
HincII	GTYRAC	1 cut(s)	1656
HindII	GTYRAC	1 cut(s)	1656
HindIII	AAGCTT	2 cut(s)	891, 1493
HpaI	GTTAAC	1 cut(s)	1656
HphI	GGTGA	1 cut(s)	370
Hpy166II	GTNNAC	8 cut(s)	505, 514, 521, 749, 1077, 1250, 1387, 1656
Hpy188I	TCNGA	5 cut(s)	403, 931, 1153, 1239, 1413
Hpy8I	GTNNAC	8 cut(s)	505, 514, 521, 749, 1077, 1250, 1387, 1656
Hpy99I	CGWCG	1 cut(s)	36
HpyCH4III	ACNGT	7 cut(s)	107, 502, 518, 613, 710, 867, 1642
HpyCH4IV	ACGT	6 cut(s)	48, 531, 672, 855, 1355, 1859
HpyF10VI	GCNNNNNNNGC	2 cut(s)	248, 449
HpyF3I	CTNAG	4 cut(s)	477, 1238, 1575, 1815
HpySE526I	ACGT	6 cut(s)	48, 531, 672, 855, 1355, 1859
Hsp92II	CATG	9 cut(s)	142, 292, 389, 734, 908, 968, 1256, 1379, 1478
HspAI	GCGC	1 cut(s)	1458
Ksp22I	TGATCA	1 cut(s)	1195
KspAI	GTTAAC	1 cut(s)	1656
LguI	GCTCTTC	1 cut(s)	1239
LmnI	GCTCC	3 cut(s)	1127, 1337, 1720
Lsp1109I	GCAGC	3 cut(s)	723, 1128, 1798
LweI	GCATC	5 cut(s)	361, 415, 626, 943, 1151
MaeI	CTAG	3 cut(s)	336, 1392, 1659
MaeII	ACGT	6 cut(s)	48, 531, 672, 855, 1355, 1859
MaeIII	GTNAC	2 cut(s)	59, 1321
MfeI	CAATTG	3 cut(s)	216, 810, 1029
MflI	RGATCY	5 cut(s)	67, 151, 484, 1398, 1484
MhlI	GDGCHC	2 cut(s)	783, 1725
MlyI	GAGTC	4 cut(s)	370, 744, 1249, 1636
MmeI	TCCRAC	1 cut(s)	1626
MroXI	GAANNNNTTC	1 cut(s)	1207
MseI	TTAA	5 cut(s)	129, 431, 1452, 1655, 1823
MslI	CAYNNNNRTG	1 cut(s)	1479
MspA1I	CMGCKG	4 cut(s)	635, 653, 1119, 1616
MspR9I	CCNGG	1 cut(s)	1599
MunI	CAATTG	3 cut(s)	216, 810, 1029
MvaI	CCWGG	1 cut(s)	1599
MwoI	GCNNNNNNNGC	2 cut(s)	248, 449
NcoI	CCATGG	1 cut(s)	730
NlaIII	CATG	9 cut(s)	142, 292, 389, 734, 908, 968, 1256, 1379, 1478
NlaIV	GGNNCC	7 cut(s)	462, 1123, 1333, 1572, 1668, 1722, 1734
NmeAIII	GCCGAG	2 cut(s)	1092, 1574
NsbI	TGCGCA	1 cut(s)	1459
NspI	RCATGY	2 cut(s)	1379, 1478
NspV	TTCGAA	2 cut(s)	396, 885
PaeI	GCATGC	1 cut(s)	1478
PciSI	GCTCTTC	1 cut(s)	1239
PdmI	GAANNNNTTC	1 cut(s)	1207
PfeI	GAWTC	7 cut(s)	393, 398, 760, 818, 1292, 1438, 1739
PflMI	CCANNNNNTGG	1 cut(s)	1604
PkrI	GCNGC	5 cut(s)	738, 1118, 1121, 1696, 1813
PleI	GAGTC	4 cut(s)	369, 744, 1248, 1635
PpsI	GAGTC	4 cut(s)	369, 744, 1248, 1635
PsiI	TTATAA	2 cut(s)	843, 1002
Psp1406I	AACGTT	1 cut(s)	855
Psp6I	CCWGG	1 cut(s)	1597
PspFI	CCCAGC	1 cut(s)	452
PspGI	CCWGG	1 cut(s)	1597
PspN4I	GGNNCC	7 cut(s)	462, 1123, 1333, 1572, 1668, 1722, 1734
PspPI	GGNCC	1 cut(s)	1570
PstI	CTGCAG	1 cut(s)	117
PstNI	CAGNNNCTG	1 cut(s)	978
PsuI	RGATCY	5 cut(s)	67, 151, 484, 1398, 1484
PvuII	CAGCTG	3 cut(s)	635, 653, 1616
RsaI	GTAC	5 cut(s)	515, 864, 869, 1358, 1639
RsaNI	GTAC	5 cut(s)	514, 863, 868, 1357, 1638
RseI	CAYNNNNRTG	1 cut(s)	1479
SapI	GCTCTTC	1 cut(s)	1239
SaqAI	TTAA	5 cut(s)	129, 431, 1452, 1655, 1823
SatI	GCNGC	5 cut(s)	737, 1117, 1120, 1695, 1812
Sau96I	GGNCC	1 cut(s)	1570
SchI	GAGTC	4 cut(s)	370, 744, 1249, 1636
ScrFI	CCNGG	1 cut(s)	1599
SduI	GDGCHC	2 cut(s)	783, 1725
SfaNI	GCATC	5 cut(s)	361, 415, 626, 943, 1151
SfcI	CTRYAG	2 cut(s)	113, 1891
SfuI	TTCGAA	2 cut(s)	396, 885
SmiMI	CAYNNNNRTG	1 cut(s)	1479
SphI	GCATGC	1 cut(s)	1478
SsiI	CCGC	4 cut(s)	981, 1119, 1158, 1694
SspI	AATATT	1 cut(s)	1465
SspMI	CTAG	3 cut(s)	336, 1392, 1659
StyD4I	CCNGG	1 cut(s)	1597
StyI	CCWWGG	1 cut(s)	730
TaaI	ACNGT	7 cut(s)	107, 502, 518, 613, 710, 867, 1642
TaiI	ACGT	6 cut(s)	51, 534, 675, 858, 1358, 1862
TatI	WGTACW	2 cut(s)	513, 1637
TauI	GCSGC	2 cut(s)	1122, 1697
TfiI	GAWTC	7 cut(s)	393, 398, 760, 818, 1292, 1438, 1739
Tru1I	TTAA	5 cut(s)	129, 431, 1452, 1655, 1823
Tru9I	TTAA	5 cut(s)	129, 431, 1452, 1655, 1823
TscAI	CASTG	4 cut(s)	422, 553, 665, 1813
TseI	GCWGC	3 cut(s)	736, 1116, 1811
TspRI	CASTG	4 cut(s)	422, 553, 665, 1813
Van91I	CCANNNNNTGG	1 cut(s)	1604
XapI	RAATTY	3 cut(s)	306, 825, 1146
XceI	RCATGY	2 cut(s)	1379, 1478
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1620
XmiI	GTMKAC	2 cut(s)	520, 1386
XmnI	GAANNNNTTC	1 cut(s)	1207
XspI	CTAG	3 cut(s)	336, 1392, 1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.