Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006117

Physical Location & Seq

Genomic Coordinates Forward (+)

56059147 .. 56061776

Gene Structure 2630 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014672

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGCCTCTCTCATGGCGATTCGACGCGCTCGAAGCCCAGCACCACTCTCTTCCATCTTCAACAAGGTACGGCCTCTCCACCCTTCTCAATCATTTCACTGCAACACCCTCCAAACCCTAACCATTTCCAAAACCCTGAGCACCTCCGCCGTCCCAAACGAGTACCCAGGTGGTGCTCCACAGCAAACCCCACCCTCCGATCATAGAAATCTAAACCCTAATCAGTGGAGCCCACAAAACCAGGGATACGGAAACCCTAACCAGTGGAATCCACAGACCCAGCACCATTATCAGGGTCAGAATCAGAGTTATCCACAACGTGGGAACTCTAATCAGTGGAATCCCCAGGCTCAGGGTCAGAGCTATCCTCAGCAGCAATACCCTAATCCATTTCCTAATCAGAATCAGAGCTACCCACAGCGTGGGAGCCCTAATCAGTGGAGTCCTCAGCGTCAAAACCCTAACCCTAATTTTGAGCAACCACCCAGAAGCCCAAATCAGTGGAACGATCAGAATCAGAATCGAGGATACCCCCCATATGGAAACCCTAGCCAGGTGAACCCTCCAAATCCCGATTTTCAGCAACCCAGAAACCAAAATCAGTGGAACAATCAGAGTCAGAATCGGGGATATCCCCAATCTGGATATCCTAATCAGGGGACTCCTCAGGCTCAGAGCCCTAACCAGTGGAACAACAAGAATCAGGGGGTGAATGAAGCCGCTGCGGTTGTCGTGCCACCTTCGATTGATGATTTGAGGCGGTTATGTGAAGAGGGGAAGGTTAAAGAAGCTCTTCAGTTGATGGATGAAGAGGGGGTTAAGGCTGATGCTGATTGCTTTCATTATCTGTTTAAGTTGTGTGGGGATTCGAAGTCGTTTGAGAATGCAAAGAAAGTTCATGACTTCTTTTTGCAGTCTACATATAGGAGTAGTCGTGACTTGAGCCATAAAGTGATTGAGATGTATGGAAAGTGTGGGAGCATGACTGATGCGCGGAGAGTGTTTGATCACCTGGTGGAGAAGAACATTGATTCTTGGCATTTGATGATCAACTGGTATGCGGATAATGGGTTAGGAGATGATGCGTTGCAGATGTTTGAGCTGATGAGGGAGCAAGGGTTGAAGCCCAATTCTGACACTTTCCTTGCAGTTTTTGCAGCTTGTGCTAGTGCAGATGCTGTGGAAGAAGCATTTTTACATTTCGATTCAATGAAACAGGAGTACGGATTTGATCCAGAAGTGGAGCATTATTTGGGGATTCTTGGTGTGCTTGGAAAATGTGGTCATCTGCATGAAGCAGTTGATTATATTGAGAAACTCCCATTTGAGCCTACAGTGGAAGTTTGGGAGGCATTGTGGAATTATGCTCGGATCCATGGAGATATTGATCTTGAAGATCATGCTGAGGAGTTAATGGTTGCTCTTGATCCGTCAAAGGCTATTACTAATAAGATCCCAACTCCACCACCAAAAAAGCGTACTGCTATTAGCATGCTTGATGGGAAAAACAGAATCACTGAGTTCAAAAATCCCACATTGTACAAGGATGATGAAAAGTTAAAGGCTCTCAATTCTATGAGAGGAGGAGGTTATGTTCCAGACACAAGATACGTTCTTCATGACATTGACCAGGAGGCAAAGGAGCAAGCCTTGCTCTATCATAGTGAGCGTTTGGCAATCGCATATGGTCTGATTAGTACTCCGGCAAGGACACCGCTTAGGATCATAAAAAACCTTCGTGTTTGTGGTGACTGTCACAATGCCATTAAGATCATGTCTAAGATTGTTGGAAGGGAATTAATTGTTAGGGACAATAAACGTTTTCATCATTTCAAGGATGGAAAATGCTCTTGTGGGGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

623

Amino Acids

70.85

Weight (kDa)

6.6

Isoelectric Point (pI)

52.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	342 - 389	8.1e-09	PPR repeat family
DYW_deaminase	PF14432	530 - 622	1.3e-44	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15690
fragaria_vesca	FvH4_2g06150
malus_domestica	MD05G1080000.v1.1
prunus_persica	Prupe.8G123800_v2.0.a1
pyrus_communis	pycom05g07310 pycom10g07740
rosa_chinensis	RchiOBHm_Chr6g0257041 RchiOBHm_Chr7g0228581
rosa_laevigata	RLG00000001553 RLG00000014672
rosa_multiflora	Rmu_sc0008871.1_g000003 Rmu_sc0011334.1_g000001 Rmu_sc0019183.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231050 Rroxscaffold_7G00208450
rosa_rugosa	Rorug05G0575600 Rorug07G0250600
rosa_samantha	Rh6AG093700 Rh6BG084500 Rh6CG081200 Rh6DG076600 Rh7AG402800 Rh7BG383700 Rh7CG422100 Rh7DG398500
rosa_wichuraiana	Rw6G008060 Rw7G033470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	320, 422
AccI	GTMKAC	1 cut(s)	917
AccII	CGCG	2 cut(s)	27, 994
AciI	CCGC	7 cut(s)	147, 720, 725, 760, 994, 1061, 1715
AclI	AACGTT	1 cut(s)	1819
AclWI	GGATC	6 cut(s)	1226, 1366, 1379, 1421, 1447, 1730
AcuI	CTGAAG	1 cut(s)	779
AdeI	CACNNNGTG	3 cut(s)	320, 422, 1015
AfaI	GTAC	6 cut(s)	69, 164, 1223, 1480, 1541, 1699
AfiI	CCNNNNNNNGG	8 cut(s)	292, 320, 352, 422, 539, 553, 641, 656
AgsI	TTSAA	6 cut(s)	61, 1123, 1209, 1394, 1525, 1834
AjnI	CCWGG	6 cut(s)	166, 240, 345, 552, 1011, 1629
AloI	GAACNNNNNNTCC	2 cut(s)	1578, 1610
AluBI	AGCT	5 cut(s)	363, 411, 791, 1102, 1160
AluI	AGCT	5 cut(s)	363, 411, 791, 1102, 1160
Alw21I	GWGCWC	2 cut(s)	143, 178
AlwI	GGATC	6 cut(s)	1226, 1366, 1379, 1421, 1447, 1730
AlwNI	CAGNNNCTG	1 cut(s)	1178
AoxI	GGCC	2 cut(s)	3, 71
ApeKI	GCWGC	3 cut(s)	373, 722, 1157
AseI	ATTAAT	1 cut(s)	1799
Asp700I	GAANNNNTTC	1 cut(s)	792
AspLEI	GCGC	2 cut(s)	29, 994
AsuHPI	GGTGA	4 cut(s)	568, 721, 1001, 1760
AsuII	TTCGAA	1 cut(s)	869
AxyI	CCTNAGG	1 cut(s)	666
BamHI	GGATCC	1 cut(s)	1371
BanII	GRGCYC	3 cut(s)	233, 431, 680
BarI	GAAGNNNNNNTAC	2 cut(s)	1179, 1211
Bbv12I	GWGCWC	2 cut(s)	143, 178
BbvCI	CCTCAGC	3 cut(s)	369, 447, 1404
BbvI	GCAGC	3 cut(s)	385, 709, 1169
BccI	CCATC	4 cut(s)	62, 796, 1493, 1832
BceAI	ACGGC	2 cut(s)	86, 134
BciT130I	CCWGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
BciVI	GTATCC	2 cut(s)	239, 521
BclI	TGATCA	2 cut(s)	1006, 1047
BfaI	CTAG	2 cut(s)	549, 1167
BfmI	CTRYAG	1 cut(s)	1332
BfuI	GTATCC	2 cut(s)	239, 521
BisI	GCNGC	4 cut(s)	374, 720, 723, 1158
BlsI	GCNGC	4 cut(s)	375, 721, 724, 1159
BmcAI	AGTACT	1 cut(s)	1699
Bme1390I	CCNGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
BmiI	GGNNCC	3 cut(s)	230, 428, 1373
BmrFI	CCNGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
BmsI	GCATC	4 cut(s)	817, 979, 1072, 1165
BplI	GAGNNNNNCTC	2 cut(s)	352, 384
Bpu10I	CCTNAGC	6 cut(s)	137, 351, 369, 447, 1404, 1718
Bpu14I	TTCGAA	1 cut(s)	869
BpuEI	CTTGAG	1 cut(s)	961
BsaBI	GATNNNNATC	2 cut(s)	513, 1386
BsaJI	CCNNGG	4 cut(s)	166, 241, 345, 1375
Bsc4I	CCNNNNNNNGG	8 cut(s)	292, 320, 352, 422, 539, 553, 641, 656
Bse1I	ACTGG	3 cut(s)	262, 685, 1058
Bse21I	CCTNAGG	1 cut(s)	666
Bse8I	GATNNNNATC	2 cut(s)	513, 1386
BseBI	CCWGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
BseDI	CCNNGG	4 cut(s)	166, 241, 345, 1375
BseGI	GGATG	3 cut(s)	811, 1552, 1843
BseJI	GATNNNNATC	2 cut(s)	513, 1386
BseLI	CCNNNNNNNGG	8 cut(s)	292, 320, 352, 422, 539, 553, 641, 656
BseMII	CTCAG	8 cut(s)	128, 365, 383, 461, 680, 686, 1395, 1509
BseNI	ACTGG	3 cut(s)	262, 685, 1058
BseRI	GAGGAG	4 cut(s)	654, 1421, 1596, 1599
BseXI	GCAGC	3 cut(s)	385, 709, 1169
BseYI	CCCAGC	2 cut(s)	37, 279
BsgI	GTGCAG	1 cut(s)	1191
Bsh1236I	CGCG	2 cut(s)	27, 994
BshFI	GGCC	2 cut(s)	5, 73
BsiHKAI	GWGCWC	2 cut(s)	143, 178
BsiSI	CCGG	1 cut(s)	1703
BslFI	GGGAC	3 cut(s)	137, 673, 1823
BslI	CCNNNNNNNGG	8 cut(s)	292, 320, 352, 422, 539, 553, 641, 656
BsmFI	GGGAC	3 cut(s)	137, 673, 1823
BsmI	GAATGC	1 cut(s)	889
BsnI	GGCC	2 cut(s)	5, 73
Bsp119I	TTCGAA	1 cut(s)	869
Bsp1286I	GDGCHC	5 cut(s)	143, 178, 233, 431, 680
Bsp1407I	TGTACA	1 cut(s)	1539
Bsp19I	CCATGG	1 cut(s)	1375
BspACI	CCGC	7 cut(s)	147, 720, 725, 760, 994, 1061, 1715
BspANI	GGCC	2 cut(s)	5, 73
BspCNI	CTCAG	8 cut(s)	129, 364, 382, 460, 679, 685, 1396, 1510
BspFNI	CGCG	2 cut(s)	27, 994
BspHI	TCATGA	2 cut(s)	898, 1618
BspLI	GGNNCC	3 cut(s)	230, 428, 1373
BspPI	GGATC	6 cut(s)	1226, 1366, 1379, 1421, 1447, 1730
BspQI	GCTCTTC	1 cut(s)	798
BspT104I	TTCGAA	1 cut(s)	869
BsrGI	TGTACA	1 cut(s)	1539
BsrI	ACTGG	3 cut(s)	262, 685, 1058
BssECI	CCNNGG	4 cut(s)	166, 241, 345, 1375
BssT1I	CCWWGG	1 cut(s)	1375
Bst2UI	CCWGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
Bst4CI	ACNGT	2 cut(s)	1336, 1754
Bst6I	CTCTTC	4 cut(s)	55, 765, 798, 804
BstAPI	GCANNNNNTGC	3 cut(s)	1154, 1163, 1651
BstAUI	TGTACA	1 cut(s)	1539
BstBI	TTCGAA	1 cut(s)	869
BstC8I	GCNNGC	2 cut(s)	1493, 1647
BstDSI	CCRYGG	1 cut(s)	1375
BstF5I	GGATG	3 cut(s)	811, 1552, 1843
BstFNI	CGCG	2 cut(s)	27, 994
BstHHI	GCGC	2 cut(s)	29, 994
BstMWI	GCNNNNNNNGC	4 cut(s)	33, 1154, 1163, 1651
BstNI	CCWGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
BstNSI	RCATGY	1 cut(s)	1495
BstSCI	CCNGG	6 cut(s)	166, 240, 345, 552, 1011, 1629
BstSFI	CTRYAG	1 cut(s)	1332
BstUI	CGCG	2 cut(s)	27, 994
BstV1I	GCAGC	3 cut(s)	385, 709, 1169
BstX2I	RGATCY	2 cut(s)	1371, 1452
BstXI	CCANNNNNNTGG	1 cut(s)	501
BstYI	RGATCY	2 cut(s)	1371, 1452
Bsu36I	CCTNAGG	1 cut(s)	666
BsuI	GTATCC	2 cut(s)	239, 521
BsuRI	GGCC	2 cut(s)	5, 73
BtgI	CCRYGG	1 cut(s)	1375
BtsCI	GGATG	3 cut(s)	811, 1552, 1843
BtsI	GCAGTG	1 cut(s)	97
Cac8I	GCNNGC	2 cut(s)	1493, 1647
CaiI	CAGNNNCTG	1 cut(s)	1178
CciI	TCATGA	2 cut(s)	898, 1618
CfoI	GCGC	2 cut(s)	29, 994
CseI	GACGC	2 cut(s)	33, 440
CsiI	ACCWGGT	1 cut(s)	1011
Csp6I	GTAC	6 cut(s)	68, 163, 1222, 1479, 1540, 1698
CspCI	CAANNNNNGTGG	2 cut(s)	584, 619
CviAII	CATG	9 cut(s)	13, 899, 982, 1292, 1376, 1400, 1492, 1619, 1774
CviQI	GTAC	6 cut(s)	68, 163, 1222, 1479, 1540, 1698
DraIII	CACNNNGTG	3 cut(s)	320, 422, 1015
Eam1104I	CTCTTC	4 cut(s)	55, 765, 798, 804
EarI	CTCTTC	4 cut(s)	55, 765, 798, 804
EciI	GGCGGA	1 cut(s)	136
Eco130I	CCWWGG	1 cut(s)	1375
Eco24I	GRGCYC	3 cut(s)	233, 431, 680
Eco32I	GATATC	2 cut(s)	632, 647
Eco57I	CTGAAG	1 cut(s)	779
Eco81I	CCTNAGG	1 cut(s)	666
EcoRII	CCWGG	6 cut(s)	166, 240, 345, 552, 1011, 1629
EcoRV	GATATC	2 cut(s)	632, 647
EcoT14I	CCWWGG	1 cut(s)	1375
EcoT38I	GRGCYC	3 cut(s)	233, 431, 680
ErhI	CCWWGG	1 cut(s)	1375
FaeI	CATG	9 cut(s)	16, 902, 985, 1295, 1379, 1403, 1495, 1622, 1777
FalI	AAGNNNNNCTT	2 cut(s)	777, 809
FaqI	GGGAC	3 cut(s)	137, 673, 1823
FatI	CATG	9 cut(s)	12, 898, 981, 1291, 1375, 1399, 1491, 1618, 1773
FauNDI	CATATG	2 cut(s)	538, 1684
FbaI	TGATCA	2 cut(s)	1006, 1047
FblI	GTMKAC	1 cut(s)	917
Fnu4HI	GCNGC	4 cut(s)	374, 720, 723, 1158
FokI	GGATG	3 cut(s)	818, 1559, 1850
FriOI	GRGCYC	3 cut(s)	233, 431, 680
Fsp4HI	GCNGC	4 cut(s)	374, 720, 723, 1158
FspBI	CTAG	2 cut(s)	549, 1167
GlaI	GCGC	2 cut(s)	28, 993
GluI	GCNGC	4 cut(s)	374, 720, 723, 1158
GsaI	CCCAGC	2 cut(s)	41, 283
HaeIII	GGCC	2 cut(s)	5, 73
HapII	CCGG	1 cut(s)	1703
HgaI	GACGC	2 cut(s)	33, 440
HhaI	GCGC	2 cut(s)	29, 994
Hin1II	CATG	9 cut(s)	16, 902, 985, 1295, 1379, 1403, 1495, 1622, 1777
Hin6I	GCGC	2 cut(s)	27, 992
HinP1I	GCGC	2 cut(s)	27, 992
HpaII	CCGG	1 cut(s)	1703
HphI	GGTGA	4 cut(s)	568, 721, 1001, 1760
Hpy166II	GTNNAC	2 cut(s)	559, 918
Hpy188III	TCNNGA	9 cut(s)	572, 642, 899, 935, 1235, 1391, 1424, 1598, 1619
Hpy8I	GTNNAC	2 cut(s)	559, 918
Hpy99I	CGWCG	1 cut(s)	27
HpyAV	CCTTC	5 cut(s)	93, 750, 772, 1745, 1785
HpyCH4III	ACNGT	2 cut(s)	1336, 1754
HpyCH4IV	ACGT	3 cut(s)	319, 1611, 1819
HpyCH4V	TGCA	8 cut(s)	102, 887, 913, 1090, 1148, 1157, 1172, 1291
HpyF10VI	GCNNNNNNNGC	4 cut(s)	33, 1154, 1163, 1651
HpySE526I	ACGT	3 cut(s)	319, 1611, 1819
Hsp92II	CATG	9 cut(s)	16, 902, 985, 1295, 1379, 1403, 1495, 1622, 1777
HspAI	GCGC	2 cut(s)	27, 992
Ksp22I	TGATCA	2 cut(s)	1006, 1047
LguI	GCTCTTC	1 cut(s)	798
LmnI	GCTCC	7 cut(s)	181, 228, 426, 978, 1111, 1243, 1642
Lsp1109I	GCAGC	3 cut(s)	385, 709, 1169
LweI	GCATC	4 cut(s)	817, 979, 1072, 1165
MabI	ACCWGGT	1 cut(s)	1011
MaeI	CTAG	2 cut(s)	549, 1167
MaeII	ACGT	3 cut(s)	319, 1611, 1819
MaeIII	GTNAC	3 cut(s)	935, 1748, 1754
MboII	GAAGA	9 cut(s)	42, 49, 782, 785, 821, 1033, 1196, 1406, 1607
MflI	RGATCY	2 cut(s)	1371, 1452
MhlI	GDGCHC	5 cut(s)	143, 178, 233, 431, 680
MluCI	AATT	6 cut(s)	469, 1129, 1360, 1570, 1796, 1800
MlyI	GAGTC	3 cut(s)	451, 625, 655
MmeI	TCCRAC	1 cut(s)	1768
MroXI	GAANNNNTTC	1 cut(s)	792
MseI	TTAA	7 cut(s)	783, 819, 852, 1412, 1559, 1767, 1799
MslI	CAYNNNNRTG	1 cut(s)	1290
MspA1I	CMGCKG	1 cut(s)	722
MspI	CCGG	1 cut(s)	1703
MspR9I	CCNGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
Mva1269I	GAATGC	1 cut(s)	889
MvaI	CCWGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
MvnI	CGCG	2 cut(s)	27, 994
MwoI	GCNNNNNNNGC	4 cut(s)	33, 1154, 1163, 1651
NcoI	CCATGG	1 cut(s)	1375
NdeI	CATATG	2 cut(s)	538, 1684
NlaIII	CATG	9 cut(s)	16, 902, 985, 1295, 1379, 1403, 1495, 1622, 1777
NlaIV	GGNNCC	3 cut(s)	230, 428, 1373
NmuCI	GTSAC	3 cut(s)	935, 1748, 1754
NspI	RCATGY	1 cut(s)	1495
NspV	TTCGAA	1 cut(s)	869
PaeI	GCATGC	1 cut(s)	1495
PagI	TCATGA	2 cut(s)	898, 1618
PciSI	GCTCTTC	1 cut(s)	798
PcsI	WCGNNNNNNNCGW	1 cut(s)	28
PctI	GAATGC	1 cut(s)	889
PdmI	GAANNNNTTC	1 cut(s)	792
PflMI	CCANNNNNTGG	2 cut(s)	320, 422
PkrI	GCNGC	4 cut(s)	375, 721, 724, 1159
PleI	GAGTC	3 cut(s)	450, 624, 655
PpsI	GAGTC	3 cut(s)	450, 624, 655
PshBI	ATTAAT	1 cut(s)	1799
Psp1406I	AACGTT	1 cut(s)	1819
Psp6I	CCWGG	6 cut(s)	166, 240, 345, 552, 1011, 1629
PspFI	CCCAGC	2 cut(s)	37, 279
PspGI	CCWGG	6 cut(s)	166, 240, 345, 552, 1011, 1629
PspN4I	GGNNCC	3 cut(s)	230, 428, 1373
PstNI	CAGNNNCTG	1 cut(s)	1178
PsuI	RGATCY	2 cut(s)	1371, 1452
RsaI	GTAC	6 cut(s)	69, 164, 1223, 1480, 1541, 1699
RsaNI	GTAC	6 cut(s)	68, 163, 1222, 1479, 1540, 1698
RseI	CAYNNNNRTG	1 cut(s)	1290
SapI	GCTCTTC	1 cut(s)	798
SaqAI	TTAA	7 cut(s)	783, 819, 852, 1412, 1559, 1767, 1799
SatI	GCNGC	4 cut(s)	374, 720, 723, 1158
ScaI	AGTACT	1 cut(s)	1699
SchI	GAGTC	3 cut(s)	451, 625, 655
ScrFI	CCNGG	6 cut(s)	168, 242, 347, 554, 1013, 1631
SduI	GDGCHC	5 cut(s)	143, 178, 233, 431, 680
SexAI	ACCWGGT	1 cut(s)	1011
SfaNI	GCATC	4 cut(s)	817, 979, 1072, 1165
SfcI	CTRYAG	1 cut(s)	1332
SfuI	TTCGAA	1 cut(s)	869
SmiMI	CAYNNNNRTG	1 cut(s)	1290
SmlI	CTYRAG	1 cut(s)	940
SmoI	CTYRAG	1 cut(s)	940
SphI	GCATGC	1 cut(s)	1495
Sse9I	AATT	6 cut(s)	469, 1129, 1360, 1570, 1796, 1800
SsiI	CCGC	7 cut(s)	147, 720, 725, 760, 994, 1061, 1715
SspMI	CTAG	2 cut(s)	549, 1167
StyD4I	CCNGG	6 cut(s)	166, 240, 345, 552, 1011, 1629
StyI	CCWWGG	1 cut(s)	1375
TaaI	ACNGT	2 cut(s)	1336, 1754
TaiI	ACGT	3 cut(s)	322, 1614, 1822
TaqI	TCGA	6 cut(s)	22, 31, 523, 743, 869, 1203
TasI	AATT	6 cut(s)	469, 1129, 1360, 1570, 1796, 1800
TatI	WGTACW	2 cut(s)	1539, 1697
TauI	GCSGC	1 cut(s)	722
Tru1I	TTAA	7 cut(s)	783, 819, 852, 1412, 1559, 1767, 1799
Tru9I	TTAA	7 cut(s)	783, 819, 852, 1412, 1559, 1767, 1799
TseFI	GTSAC	3 cut(s)	935, 1748, 1754
TseI	GCWGC	3 cut(s)	373, 722, 1157
Tsp45I	GTSAC	3 cut(s)	935, 1748, 1754
TspDTI	ATGAA	9 cut(s)	729, 822, 830, 887, 1226, 1308, 1566, 1607, 1814
TspGWI	ACGGA	3 cut(s)	264, 1239, 1419
Van91I	CCANNNNNTGG	2 cut(s)	320, 422
VspI	ATTAAT	1 cut(s)	1799
XceI	RCATGY	1 cut(s)	1495
XmiI	GTMKAC	1 cut(s)	917
XmnI	GAANNNNTTC	1 cut(s)	792
XspI	CTAG	2 cut(s)	549, 1167
ZrmI	AGTACT	1 cut(s)	1699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.