Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0006117

Physical Location & Seq

Genomic Coordinates Reverse (-)

8714295 .. 8717530

Gene Structure 3236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG076600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGCCTCTCTCATGGCGATTCGACGCGCTCGGACCCCAGCACCACTCTCTTCCATCTTCAACAAGGTACGGCCTCTCCACCCTTCTCACTCATTTCACTGCAACACCCTCCAAACCCTAACCATTTCCAAAACCCTGAGCACCTTCGCCGTCCCAAACGAGTACCCAGGGGCTGCTCCACAGCAAACCCCACCCTCAGACCATAGAAATCTAAACCCTAATCAGTGGAGCCCACCAAACCAGGGTTACGGAAACCCTAACCAGTGGAATTCACAGACCCAGCACCATTATCAGGGTCAGAATCAGAGCTATCCACAACGTGGGAACTCTAATCAGTGGAATCCCCAGGCTCAGGGTCAGAGCTATCCTCAGCAGCAAAACCCTAATCCATTTCCTAACCAGAATCAGAGCTACCCACAGCGTGGGAGCCCTAATCAGTGGAGTACTCAGCGTCAAAACCCTAACCCTAATTTTGAGCAGCCACCCAGAAGCCCAAATCAGTGGAATGATCAGAATCAGAATCGAGGATACCCCCAATATGGAAACCCTAGCCAGGTGAACCCTCCAAATCCCAATTTTCAGCAACCCAGAAACCCAAATCAGTGGAACAATCAGAATCAGAATCAGAATCAGAATCGGGGATACCCCCAATCTGGATATCCTAATCAGGGGGCCCCTCAGGCTCAGAACCCTAACCAGTGGAACAACAAGAATCAGGCGGTGAATGAAGCCGCCGCGGTTGTTGTGCCACCTTCGATTGATGATTTGAGGCGGTTATGTGAAGAGGGGAAGGTTAAAGAAGCTCTTCAGTTGATGGATGAAGAGGGGGTTAAGGCTGATGCTGATTGCTTTCATTCTTTGTTTAAGTTGTGTGGGGATTCGAAGTCGTTTGAGAATGCAAAGAAAGTTCATGACTTCTTTTTGCAGTCGACATATAGGAGTAGTCGTGACTTGAGCCATAAAGTGATTGAAATGTATGGAAAGTGTGGAAGCATGACTGATGCACGGAGAGTGTTTGATCACCTGGTGGAGAAGAACATTGATTCTTGGCATTTGATGATCAACTGGTATGCGGATAATGGGTTAGGAGATGATGCGTTGCAGATGTTTGAGCTGATGAGGGAGCAAGGGTTGAAGCCCAATTCTGACACTTTCCTTGCAGTTTTTGCAGCTTGTGCTAGTGCAGATGCTGTGGAAGAAGCATTTTTACATTTCGACTCAATGAAACAGGAGTACGGATTTGATCCAGAAGTGGAGCATTATTTGGGGATTCTAGATGTGCTCGGAAAATGTGGTCATCTGCATGAAGCAGTTGATTATATTGAGAAACTCCCATTTGAGCCTACAGTGGAAGTTTGGGAGGCATTGTGGAATTATGCTCGGATCCATGGAGATATTGATCTTGAAGATCATGCTGAGGAGTTAATGGTTGCTCTTGATCCGTCAAAGGCTATTACTAAAAAGATCCCAACTCCACCACCAAAAAAGCGTACTGCTATTAGCATGCTTGATGGGAAAAACAGAATCACTGAGTTCAAAAATCCCACATTGTACAAGGATGATGAAAAGTTAAAGGCTCTCAATTCGATGAGAGGAGGAGGTTATGTTCCAGACACAAGATATGTTCTTCATGACATTGACCAGGAGGCAAAGGAGCAAGCCTTGCTCTATCACAGTGAGCGTTTGGCAATCGCATATGGTCTAATTAGTACTCCGGCAAGGACACCGCTTAGGATCATCAAAAACCTTCGTGTTTGTGGTGATTGTCACAATGCCATTAAGATCATGTCTAAGATTGTTGGAAGGGAATTAATTGTTAGGGACAATAAACGTTTTCATCATTTCAAGGATGGAAAATGCTCTTGTGGGGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

626

Amino Acids

71.38

Weight (kDa)

6.75

Isoelectric Point (pI)

44.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	346 - 393	8.2e-09	PPR repeat family
DYW_deaminase	PF14432	534 - 626	1.3e-44	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15690
fragaria_vesca	FvH4_2g06150
malus_domestica	MD05G1080000.v1.1
prunus_persica	Prupe.8G123800_v2.0.a1
pyrus_communis	pycom05g07310 pycom10g07740
rosa_chinensis	RchiOBHm_Chr6g0257041 RchiOBHm_Chr7g0228581
rosa_laevigata	RLG00000001553 RLG00000014672
rosa_multiflora	Rmu_sc0008871.1_g000003 Rmu_sc0011334.1_g000001 Rmu_sc0019183.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231050 Rroxscaffold_7G00208450
rosa_rugosa	Rorug05G0575600 Rorug07G0250600
rosa_samantha	Rh6AG093700 Rh6BG084500 Rh6CG081200 Rh6DG076600 Rh7AG402800 Rh7BG383700 Rh7CG422100 Rh7DG398500
rosa_wichuraiana	Rw6G008060 Rw7G033470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	320, 422
AccI	GTMKAC	1 cut(s)	929
AccII	CGCG	2 cut(s)	27, 737
AciI	CCGC	7 cut(s)	719, 732, 735, 737, 772, 1073, 1727
AclI	AACGTT	1 cut(s)	1831
AclWI	GGATC	6 cut(s)	1238, 1378, 1391, 1433, 1459, 1742
AcsI	RAATTY	1 cut(s)	268
AcuI	CTGAAG	1 cut(s)	791
AdeI	CACNNNGTG	3 cut(s)	320, 422, 1027
AfaI	GTAC	7 cut(s)	69, 164, 445, 1235, 1492, 1553, 1711
AfiI	CCNNNNNNNGG	9 cut(s)	242, 292, 320, 352, 422, 539, 553, 653, 668
AgsI	TTSAA	6 cut(s)	61, 971, 1135, 1406, 1537, 1846
AjnI	CCWGG	6 cut(s)	166, 240, 345, 552, 1023, 1641
AloI	GAACNNNNNNTCC	2 cut(s)	1590, 1622
AluBI	AGCT	6 cut(s)	309, 363, 411, 803, 1114, 1172
AluI	AGCT	6 cut(s)	309, 363, 411, 803, 1114, 1172
Alw21I	GWGCWC	2 cut(s)	143, 1284
AlwI	GGATC	6 cut(s)	1238, 1378, 1391, 1433, 1459, 1742
AlwNI	CAGNNNCTG	2 cut(s)	173, 1190
AoxI	GGCC	3 cut(s)	3, 71, 672
ApaI	GGGCCC	1 cut(s)	676
ApeKI	GCWGC	4 cut(s)	173, 373, 478, 1169
ApoI	RAATTY	1 cut(s)	268
AseI	ATTAAT	1 cut(s)	1811
Asp700I	GAANNNNTTC	1 cut(s)	804
AspLEI	GCGC	1 cut(s)	29
AspS9I	GGNCC	3 cut(s)	33, 672, 673
AsuHPI	GGTGA	4 cut(s)	568, 733, 1013, 1772
AsuII	TTCGAA	1 cut(s)	881
AvaII	GGWCC	1 cut(s)	33
AxyI	CCTNAGG	1 cut(s)	678
BaeGI	GKGCMC	1 cut(s)	676
BamHI	GGATCC	1 cut(s)	1383
BanII	GRGCYC	3 cut(s)	233, 431, 676
BarI	GAAGNNNNNNTAC	2 cut(s)	1191, 1223
Bbv12I	GWGCWC	2 cut(s)	143, 1284
BbvCI	CCTCAGC	2 cut(s)	369, 1416
BbvI	GCAGC	4 cut(s)	160, 385, 490, 1181
BccI	CCATC	4 cut(s)	62, 808, 1505, 1844
BceAI	ACGGC	2 cut(s)	86, 134
BciT130I	CCWGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
BciVI	GTATCC	2 cut(s)	521, 635
BclI	TGATCA	3 cut(s)	508, 1018, 1059
BfaI	CTAG	3 cut(s)	549, 1179, 1274
BfmI	CTRYAG	1 cut(s)	1344
BfuI	GTATCC	2 cut(s)	521, 635
BglI	GCCNNNNNGGC	1 cut(s)	680
BisI	GCNGC	6 cut(s)	174, 374, 479, 732, 735, 1170
BlsI	GCNGC	6 cut(s)	175, 375, 480, 733, 736, 1171
BmcAI	AGTACT	2 cut(s)	445, 1711
Bme1390I	CCNGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
Bme18I	GGWCC	1 cut(s)	33
BmgT120I	GGNCC	3 cut(s)	33, 672, 673
BmiI	GGNNCC	7 cut(s)	35, 230, 428, 673, 674, 675, 1385
BmrFI	CCNGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
BmsI	GCATC	4 cut(s)	829, 991, 1084, 1177
BplI	GAGNNNNNCTC	2 cut(s)	352, 384
Bpu10I	CCTNAGC	5 cut(s)	137, 351, 369, 1416, 1730
Bpu14I	TTCGAA	1 cut(s)	881
BpuEI	CTTGAG	1 cut(s)	973
BsaBI	GATNNNNATC	2 cut(s)	513, 1398
BsaJI	CCNNGG	6 cut(s)	166, 167, 241, 345, 735, 1387
Bsc4I	CCNNNNNNNGG	9 cut(s)	242, 292, 320, 352, 422, 539, 553, 653, 668
Bse1I	ACTGG	3 cut(s)	262, 697, 1070
Bse21I	CCTNAGG	1 cut(s)	678
Bse8I	GATNNNNATC	2 cut(s)	513, 1398
BseBI	CCWGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
BseDI	CCNNGG	6 cut(s)	166, 167, 241, 345, 735, 1387
BseGI	GGATG	3 cut(s)	823, 1564, 1855
BseJI	GATNNNNATC	2 cut(s)	513, 1398
BseLI	CCNNNNNNNGG	9 cut(s)	242, 292, 320, 352, 422, 539, 553, 653, 668
BseMII	CTCAG	9 cut(s)	128, 210, 365, 383, 461, 692, 698, 1407, 1521
BseNI	ACTGG	3 cut(s)	262, 697, 1070
BseRI	GAGGAG	3 cut(s)	1433, 1608, 1611
BseSI	GKGCMC	1 cut(s)	676
BseXI	GCAGC	4 cut(s)	160, 385, 490, 1181
BseYI	CCCAGC	2 cut(s)	37, 279
BsgI	GTGCAG	1 cut(s)	1203
Bsh1236I	CGCG	2 cut(s)	27, 737
BshFI	GGCC	3 cut(s)	5, 73, 674
BsiHKAI	GWGCWC	2 cut(s)	143, 1284
BsiSI	CCGG	1 cut(s)	1715
BslFI	GGGAC	2 cut(s)	137, 1835
BslI	CCNNNNNNNGG	9 cut(s)	242, 292, 320, 352, 422, 539, 553, 653, 668
BsmFI	GGGAC	2 cut(s)	137, 1835
BsmI	GAATGC	1 cut(s)	901
BsnI	GGCC	3 cut(s)	5, 73, 674
Bsp119I	TTCGAA	1 cut(s)	881
Bsp120I	GGGCCC	1 cut(s)	672
Bsp1286I	GDGCHC	5 cut(s)	143, 233, 431, 676, 1284
Bsp1407I	TGTACA	1 cut(s)	1551
Bsp19I	CCATGG	1 cut(s)	1387
BspACI	CCGC	7 cut(s)	719, 732, 735, 737, 772, 1073, 1727
BspANI	GGCC	3 cut(s)	5, 73, 674
BspCNI	CTCAG	9 cut(s)	129, 209, 364, 382, 460, 691, 697, 1408, 1522
BspFNI	CGCG	2 cut(s)	27, 737
BspHI	TCATGA	2 cut(s)	910, 1630
BspLI	GGNNCC	7 cut(s)	35, 230, 428, 673, 674, 675, 1385
BspPI	GGATC	6 cut(s)	1238, 1378, 1391, 1433, 1459, 1742
BspQI	GCTCTTC	1 cut(s)	810
BspT104I	TTCGAA	1 cut(s)	881
BsrGI	TGTACA	1 cut(s)	1551
BsrI	ACTGG	3 cut(s)	262, 697, 1070
BssECI	CCNNGG	6 cut(s)	166, 167, 241, 345, 735, 1387
BssT1I	CCWWGG	1 cut(s)	1387
Bst2UI	CCWGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
Bst4CI	ACNGT	2 cut(s)	1348, 1676
Bst6I	CTCTTC	4 cut(s)	55, 777, 810, 816
BstAPI	GCANNNNNTGC	3 cut(s)	1166, 1175, 1663
BstAUI	TGTACA	1 cut(s)	1551
BstBI	TTCGAA	1 cut(s)	881
BstC8I	GCNNGC	2 cut(s)	1505, 1659
BstDSI	CCRYGG	2 cut(s)	735, 1387
BstF5I	GGATG	3 cut(s)	823, 1564, 1855
BstFNI	CGCG	2 cut(s)	27, 737
BstHHI	GCGC	1 cut(s)	29
BstMWI	GCNNNNNNNGC	4 cut(s)	680, 1166, 1175, 1663
BstNI	CCWGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
BstNSI	RCATGY	1 cut(s)	1507
BstSCI	CCNGG	6 cut(s)	166, 240, 345, 552, 1023, 1641
BstSFI	CTRYAG	1 cut(s)	1344
BstSLI	GKGCMC	1 cut(s)	676
BstUI	CGCG	2 cut(s)	27, 737
BstV1I	GCAGC	4 cut(s)	160, 385, 490, 1181
BstX2I	RGATCY	2 cut(s)	1383, 1464
BstXI	CCANNNNNNTGG	2 cut(s)	501, 603
BstYI	RGATCY	2 cut(s)	1383, 1464
Bsu36I	CCTNAGG	1 cut(s)	678
BsuI	GTATCC	2 cut(s)	521, 635
BsuRI	GGCC	3 cut(s)	5, 73, 674
BtgI	CCRYGG	2 cut(s)	735, 1387
BtsCI	GGATG	3 cut(s)	823, 1564, 1855
BtsI	GCAGTG	1 cut(s)	97
Cac8I	GCNNGC	2 cut(s)	1505, 1659
CaiI	CAGNNNCTG	2 cut(s)	173, 1190
CciI	TCATGA	2 cut(s)	910, 1630
CfoI	GCGC	1 cut(s)	29
Cfr13I	GGNCC	3 cut(s)	33, 672, 673
Cfr42I	CCGCGG	1 cut(s)	738
CseI	GACGC	2 cut(s)	33, 440
CsiI	ACCWGGT	1 cut(s)	1023
Csp6I	GTAC	7 cut(s)	68, 163, 444, 1234, 1491, 1552, 1710
CviAII	CATG	9 cut(s)	13, 911, 994, 1304, 1388, 1412, 1504, 1631, 1786
CviQI	GTAC	7 cut(s)	68, 163, 444, 1234, 1491, 1552, 1710
DraIII	CACNNNGTG	3 cut(s)	320, 422, 1027
Eam1104I	CTCTTC	4 cut(s)	55, 777, 810, 816
EarI	CTCTTC	4 cut(s)	55, 777, 810, 816
Eco130I	CCWWGG	1 cut(s)	1387
Eco24I	GRGCYC	3 cut(s)	233, 431, 676
Eco32I	GATATC	1 cut(s)	659
Eco47I	GGWCC	1 cut(s)	33
Eco57I	CTGAAG	1 cut(s)	791
Eco81I	CCTNAGG	1 cut(s)	678
EcoO109I	RGGNCCY	2 cut(s)	672, 673
EcoRI	GAATTC	1 cut(s)	268
EcoRII	CCWGG	6 cut(s)	166, 240, 345, 552, 1023, 1641
EcoRV	GATATC	1 cut(s)	659
EcoT14I	CCWWGG	1 cut(s)	1387
EcoT38I	GRGCYC	3 cut(s)	233, 431, 676
ErhI	CCWWGG	1 cut(s)	1387
FaeI	CATG	9 cut(s)	16, 914, 997, 1307, 1391, 1415, 1507, 1634, 1789
FalI	AAGNNNNNCTT	2 cut(s)	789, 821
FaqI	GGGAC	2 cut(s)	137, 1835
FatI	CATG	9 cut(s)	12, 910, 993, 1303, 1387, 1411, 1503, 1630, 1785
FauNDI	CATATG	1 cut(s)	1696
FbaI	TGATCA	3 cut(s)	508, 1018, 1059
FblI	GTMKAC	1 cut(s)	929
Fnu4HI	GCNGC	6 cut(s)	174, 374, 479, 732, 735, 1170
FokI	GGATG	3 cut(s)	830, 1571, 1862
FriOI	GRGCYC	3 cut(s)	233, 431, 676
Fsp4HI	GCNGC	6 cut(s)	174, 374, 479, 732, 735, 1170
FspBI	CTAG	3 cut(s)	549, 1179, 1274
GlaI	GCGC	1 cut(s)	28
GluI	GCNGC	6 cut(s)	174, 374, 479, 732, 735, 1170
GsaI	CCCAGC	2 cut(s)	41, 283
HaeIII	GGCC	3 cut(s)	5, 73, 674
HapII	CCGG	1 cut(s)	1715
HgaI	GACGC	2 cut(s)	33, 440
HhaI	GCGC	1 cut(s)	29
Hin1II	CATG	9 cut(s)	16, 914, 997, 1307, 1391, 1415, 1507, 1634, 1789
Hin6I	GCGC	1 cut(s)	27
HinP1I	GCGC	1 cut(s)	27
HincII	GTYRAC	1 cut(s)	930
HindII	GTYRAC	1 cut(s)	930
HpaII	CCGG	1 cut(s)	1715
HphI	GGTGA	4 cut(s)	568, 733, 1013, 1772
Hpy166II	GTNNAC	2 cut(s)	559, 930
Hpy188III	TCNNGA	9 cut(s)	654, 911, 947, 1247, 1274, 1403, 1436, 1610, 1631
Hpy8I	GTNNAC	2 cut(s)	559, 930
Hpy99I	CGWCG	1 cut(s)	27
HpyAV	CCTTC	6 cut(s)	93, 154, 762, 784, 1757, 1797
HpyCH4III	ACNGT	2 cut(s)	1348, 1676
HpyCH4IV	ACGT	2 cut(s)	319, 1831
HpyCH4V	TGCA	9 cut(s)	102, 899, 925, 1004, 1102, 1160, 1169, 1184, 1303
HpyF10VI	GCNNNNNNNGC	4 cut(s)	680, 1166, 1175, 1663
HpySE526I	ACGT	2 cut(s)	319, 1831
Hsp92II	CATG	9 cut(s)	16, 914, 997, 1307, 1391, 1415, 1507, 1634, 1789
HspAI	GCGC	1 cut(s)	27
Ksp22I	TGATCA	3 cut(s)	508, 1018, 1059
KspI	CCGCGG	1 cut(s)	738
LguI	GCTCTTC	1 cut(s)	810
LmnI	GCTCC	6 cut(s)	181, 228, 426, 1123, 1255, 1654
Lsp1109I	GCAGC	4 cut(s)	160, 385, 490, 1181
LweI	GCATC	4 cut(s)	829, 991, 1084, 1177
MabI	ACCWGGT	1 cut(s)	1023
MaeI	CTAG	3 cut(s)	549, 1179, 1274
MaeII	ACGT	2 cut(s)	319, 1831
MaeIII	GTNAC	3 cut(s)	245, 947, 1766
MboII	GAAGA	9 cut(s)	42, 49, 794, 797, 833, 1045, 1208, 1418, 1619
MflI	RGATCY	2 cut(s)	1383, 1464
MhlI	GDGCHC	5 cut(s)	143, 233, 431, 676, 1284
MluCI	AATT	9 cut(s)	268, 469, 574, 1141, 1372, 1582, 1704, 1808, 1812
MlyI	GAGTC	1 cut(s)	1211
MmeI	TCCRAC	1 cut(s)	1780
MroXI	GAANNNNTTC	1 cut(s)	804
MseI	TTAA	7 cut(s)	795, 831, 864, 1424, 1571, 1779, 1811
MslI	CAYNNNNRTG	1 cut(s)	1302
MspA1I	CMGCKG	1 cut(s)	737
MspI	CCGG	1 cut(s)	1715
MspR9I	CCNGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
Mva1269I	GAATGC	1 cut(s)	901
MvaI	CCWGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
MvnI	CGCG	2 cut(s)	27, 737
MwoI	GCNNNNNNNGC	4 cut(s)	680, 1166, 1175, 1663
NcoI	CCATGG	1 cut(s)	1387
NdeI	CATATG	1 cut(s)	1696
NlaIII	CATG	9 cut(s)	16, 914, 997, 1307, 1391, 1415, 1507, 1634, 1789
NlaIV	GGNNCC	7 cut(s)	35, 230, 428, 673, 674, 675, 1385
NmuCI	GTSAC	2 cut(s)	947, 1766
NspI	RCATGY	1 cut(s)	1507
NspV	TTCGAA	1 cut(s)	881
PaeI	GCATGC	1 cut(s)	1507
PagI	TCATGA	2 cut(s)	910, 1630
PasI	CCCWGGG	1 cut(s)	167
PciSI	GCTCTTC	1 cut(s)	810
PctI	GAATGC	1 cut(s)	901
PdmI	GAANNNNTTC	1 cut(s)	804
PflMI	CCANNNNNTGG	2 cut(s)	320, 422
PkrI	GCNGC	6 cut(s)	175, 375, 480, 733, 736, 1171
PleI	GAGTC	1 cut(s)	1211
PpsI	GAGTC	1 cut(s)	1211
PshBI	ATTAAT	1 cut(s)	1811
Psp1406I	AACGTT	1 cut(s)	1831
Psp6I	CCWGG	6 cut(s)	166, 240, 345, 552, 1023, 1641
PspFI	CCCAGC	2 cut(s)	37, 279
PspGI	CCWGG	6 cut(s)	166, 240, 345, 552, 1023, 1641
PspN4I	GGNNCC	7 cut(s)	35, 230, 428, 673, 674, 675, 1385
PspOMI	GGGCCC	1 cut(s)	672
PspPI	GGNCC	3 cut(s)	33, 672, 673
PstNI	CAGNNNCTG	2 cut(s)	173, 1190
PsuI	RGATCY	2 cut(s)	1383, 1464
RsaI	GTAC	7 cut(s)	69, 164, 445, 1235, 1492, 1553, 1711
RsaNI	GTAC	7 cut(s)	68, 163, 444, 1234, 1491, 1552, 1710
RseI	CAYNNNNRTG	1 cut(s)	1302
SacII	CCGCGG	1 cut(s)	738
SalI	GTCGAC	1 cut(s)	928
SapI	GCTCTTC	1 cut(s)	810
SaqAI	TTAA	7 cut(s)	795, 831, 864, 1424, 1571, 1779, 1811
SatI	GCNGC	6 cut(s)	174, 374, 479, 732, 735, 1170
Sau96I	GGNCC	3 cut(s)	33, 672, 673
ScaI	AGTACT	2 cut(s)	445, 1711
SchI	GAGTC	1 cut(s)	1211
ScrFI	CCNGG	6 cut(s)	168, 242, 347, 554, 1025, 1643
SduI	GDGCHC	5 cut(s)	143, 233, 431, 676, 1284
SexAI	ACCWGGT	1 cut(s)	1023
SfaNI	GCATC	4 cut(s)	829, 991, 1084, 1177
SfcI	CTRYAG	1 cut(s)	1344
Sfr303I	CCGCGG	1 cut(s)	738
SfuI	TTCGAA	1 cut(s)	881
SgrBI	CCGCGG	1 cut(s)	738
SinI	GGWCC	1 cut(s)	33
SmiMI	CAYNNNNRTG	1 cut(s)	1302
SmlI	CTYRAG	1 cut(s)	952
SmoI	CTYRAG	1 cut(s)	952
SphI	GCATGC	1 cut(s)	1507
Sse9I	AATT	9 cut(s)	268, 469, 574, 1141, 1372, 1582, 1704, 1808, 1812
SsiI	CCGC	7 cut(s)	719, 732, 735, 737, 772, 1073, 1727
SspMI	CTAG	3 cut(s)	549, 1179, 1274
StyD4I	CCNGG	6 cut(s)	166, 240, 345, 552, 1023, 1641
StyI	CCWWGG	1 cut(s)	1387
TaaI	ACNGT	2 cut(s)	1348, 1676
TaiI	ACGT	2 cut(s)	322, 1834
TaqI	TCGA	7 cut(s)	22, 523, 755, 881, 929, 1215, 1586
TasI	AATT	9 cut(s)	268, 469, 574, 1141, 1372, 1582, 1704, 1808, 1812
TatI	WGTACW	3 cut(s)	443, 1551, 1709
TauI	GCSGC	2 cut(s)	734, 737
Tru1I	TTAA	7 cut(s)	795, 831, 864, 1424, 1571, 1779, 1811
Tru9I	TTAA	7 cut(s)	795, 831, 864, 1424, 1571, 1779, 1811
TseFI	GTSAC	2 cut(s)	947, 1766
TseI	GCWGC	4 cut(s)	173, 373, 478, 1169
Tsp45I	GTSAC	2 cut(s)	947, 1766
TspDTI	ATGAA	9 cut(s)	741, 834, 842, 899, 1238, 1320, 1578, 1619, 1826
TspGWI	ACGGA	4 cut(s)	264, 1021, 1251, 1431
Van91I	CCANNNNNTGG	2 cut(s)	320, 422
VpaK11BI	GGWCC	1 cut(s)	33
VspI	ATTAAT	1 cut(s)	1811
XapI	RAATTY	1 cut(s)	268
XbaI	TCTAGA	1 cut(s)	1273
XceI	RCATGY	1 cut(s)	1507
XmiI	GTMKAC	1 cut(s)	929
XmnI	GAANNNNTTC	1 cut(s)	804
XspI	CTAG	3 cut(s)	549, 1179, 1274
ZrmI	AGTACT	2 cut(s)	445, 1711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.