Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0000948

Physical Location & Seq

Genomic Coordinates Reverse (-)

16593653 .. 16595775

Gene Structure 2123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g13040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGGAAAGCAGGTGGCCGTTGTAGGAGCTGGGATTAGTGGCCTCCTTGCCTGCAAGTACACACTTTCAAAGGGATTTCAACCTATCGTGTTTGAATCTACGAGCAGCATTGATGGAGGATCGATCAAAACTGTTGAGTCTACCAAGCTCCAAACTCCTAAACCGGTCTACCAATTCTCAGATTTTCCATGGCCATCTTCAGTGGAAGAGGACTTTCCTAGCCAGCATCAAGTTTTGGATTACATCCAATCATATGCTCAACATTTTGACTTGCTTAAGCACATCAAATTCGACACCAAAGTGTGTGGCATTGAGTATGAAGGTGCATCTGAGGATGAGATGCAAGCTTGGAGTCACTGGGGTGGAACTGGAGAGCCTTTCAGCTCCAAAGGGAAATGGAAAGTTGCAGTAGAAGACAAACATAGCCGTTCAACAGAGGTTTACCTTGTGGACTTTGTGATCCTCTGCATCGGGCGGTTTAGTGATGTTCCAAACATTCCTGAATTCCCTTACAACAAGGGCCCAGAAGCATTTGATGGGGAGGTTATACACTCAAAGGATTATGCCGCAATGGATTACGAAAGAGCGCGTAACTTCGTGAAAGGAAAGCGTGTAACAGTTGTTGGATTTCAGAAATCTGCACTGGACATTGCAATGGAGTGTTCGAACACAAATGGGATTGAACATCCATGCACAGTAATTTACAAGACAGAGCATTGGACTGTTCCTGACTATCTTCCATGGGGTGTGCCCCTGGCATACCTATACCTTAATCGCTTCTCAGAGCTGTTGATTCATAAGCCTGGTGAAGGCATTCTACTTGGTCTCCTTGCAACAATTCTTTCACCTCTGAGATGGGGATTTTCAAAATTTGTTGAAAGCTACATAGCTAAGAAGCTTGGGTTGGCCAAGTACGGAATGGTACCTAAGCATAGTTTTCTTCAAGAAATCAGTTCTTGTCTGCTCTCAACAATACCAGAAAAGTTCTACGATCGAGTCCAAGAGGGAAGCATCATACTGAAAAAATCCCCCAGCAGCTTCAGCTTCGGCCAGGAAGGCATTTTGGTTGAAGGGGAAGCATCCCCTGTGAAGACAGATTTGGTGATACTCGCTACTGGGTTTAGAGGTGATAAAAAGCTCAAAGACATCTTTGTGTCTCCTACCTTTCAGGATTATATAGCTGGTTCGCCGGAGGCCATATTACCCCTCTACAGGGAATGTATACATGGACGAATTCCACAACTAGCCGTAATTGGATTTTCTGAGAGTGTTTCAAACTTGTACACATCCGAGATGAGATGCAGGTGGGTAGCTGAGCTTCTTGCAGGCACATTTACGTTACCAAGCATAAAAGTGATGGAGAAAGATGTGAACAAATGGGACGGATTTGCAAAGCGATACGCGGGCAAATACTTTCGGAGATCGATGCAACGGTACCCTTCATATATGGTACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004497 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009626 GO:0009627 GO:0009628 GO:0009814 GO:0009870 GO:0009987 GO:0010204 GO:0012501 GO:0016491 GO:0023052 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0036293 GO:0036294 GO:0042221 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0080134 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00982 ko01120 map00982 map01120

Pfam Domains

Protein Families

FMO-like

Protein Analysis

486

Amino Acids

54.53

Weight (kDa)

6.84

Isoelectric Point (pI)

48.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FMO-like	PF00743	3 - 483	2.2e-42	Flavin-binding monooxygenase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000948)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16430 FvH4_2g16450
malus_domestica	MD00G1083300.v1.1 MD00G1083500.v1.1 MD05G1133000.v1.1 MD16G1203500.v1.1 MD16G1203700.v1.1
prunus_persica	Prupe.8G177000_v2.0.a1 Prupe.8G177100_v2.0.a1
pyrus_communis	pycom05g13010 pycom05g13030 pycom05g13040
rosa_chinensis	RchiOBHm_Chr6g0280221 RchiOBHm_Chr6g0280281 RchiOBHm_Chr6g0280291 RchiOBHm_Chr6g0280311 RchiOBHm_Chr6g0280341
rosa_laevigata	RLG00000013067 RLG00000013073 RLG00000013075 RLG00000013076
rosa_multiflora	Rmu_sc0000757.1_g000002 Rmu_sc0001572.1_g000020 Rmu_sc0001572.1_g000034 Rmu_sc0002826.1_g000002 Rmu_sc0002858.1_g000010 Rmu_sc0002858.1_g000031 Rmu_sc0004211.1_g000005 Rmu_sc0010624.1_g000006
rosa_roxburghii	Rroxscaffold_7G00188150 Rroxscaffold_7G00188190 Rroxscaffold_7G00188220 Rroxscaffold_7G00188230 Rroxscaffold_7G00188240 Rroxscaffold_7G00188270 Rroxscaffold_7G00188290
rosa_rugosa	Rorug06G0130900 Rorug06G0131200 Rorug06G0131200 Rorug06G0131200 Rorug06G0131500
rosa_samantha	Rh6AG241200 Rh6AG241800 Rh6AG241900 Rh6AG242100 Rh6AG242200 Rh6AG242700 Rh6AG242900 Rh6BG244800 Rh6BG245400 Rh6BG245500 Rh6BG245700 Rh6CG246700 Rh6CG247000 Rh6DG237500 Rh6DG238000 Rh6DG238300 Rh6DG238600
rosa_wichuraiana	Rw5G027390 Rw6G021000 Rw6G021020 Rw6G021040 Rw6G021070 Rw6G021120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1293
Acc36I	ACCTGC	1 cut(s)	1293
Acc65I	GGTACC	2 cut(s)	922, 1434
AccB1I	GGYRCC	2 cut(s)	922, 1434
AccI	GTMKAC	3 cut(s)	140, 168, 1222
AccII	CGCG	2 cut(s)	589, 1403
AciI	CCGC	3 cut(s)	475, 567, 1403
AclWI	GGATC	2 cut(s)	127, 454
AcoI	YGGCCR	4 cut(s)	15, 191, 906, 1048
AcsI	RAATTY	4 cut(s)	287, 503, 869, 1233
AcuI	CTGAAG	2 cut(s)	183, 1024
AfaI	GTAC	6 cut(s)	59, 914, 924, 1283, 1436, 1452
AfiI	CCNNNNNNNGG	3 cut(s)	809, 1212, 1213
AflII	CTTAAG	1 cut(s)	275
AgeI	ACCGGT	1 cut(s)	163
AjnI	CCWGG	3 cut(s)	753, 802, 1050
AjuI	GAANNNNNNNTTGG	4 cut(s)	887, 919, 1082, 1114
AleI	CACNNNNGTG	2 cut(s)	299, 360
Alw26I	GTCTC	2 cut(s)	830, 1161
AlwI	GGATC	2 cut(s)	127, 454
AoxI	GGCC	7 cut(s)	15, 40, 191, 520, 906, 1048, 1194
ApaI	GGGCCC	1 cut(s)	524
ApeKI	GCWGC	2 cut(s)	105, 1035
ApoI	RAATTY	4 cut(s)	287, 503, 869, 1233
AsiGI	ACCGGT	1 cut(s)	163
Asp700I	GAANNNNTTC	1 cut(s)	813
Asp718I	GGTACC	2 cut(s)	922, 1434
AspLEI	GCGC	1 cut(s)	589
AspS9I	GGNCC	2 cut(s)	520, 521
AsuHPI	GGTGA	4 cut(s)	818, 837, 1114, 1139
AsuII	TTCGAA	1 cut(s)	665
BaeGI	GKGCMC	2 cut(s)	524, 753
BalI	TGGCCA	2 cut(s)	193, 908
BanI	GGYRCC	2 cut(s)	922, 1434
BanII	GRGCYC	1 cut(s)	524
BarI	GAAGNNNNNNTAC	4 cut(s)	801, 833, 1302, 1334
BbsI	GAAGAC	2 cut(s)	420, 1097
BbvI	GCAGC	2 cut(s)	117, 1047
BccI	CCATC	5 cut(s)	107, 202, 530, 849, 1351
BceAI	ACGGC	3 cut(s)	2, 411, 1232
BciT130I	CCWGG	3 cut(s)	755, 804, 1052
BcoDI	GTCTC	2 cut(s)	830, 1161
BfaI	CTAG	2 cut(s)	219, 1244
BfmI	CTRYAG	1 cut(s)	1210
BfrI	CTTAAG	1 cut(s)	275
BfuAI	ACCTGC	1 cut(s)	1293
BglI	GCCNNNNNGGC	1 cut(s)	1056
BisI	GCNGC	3 cut(s)	106, 567, 1036
BlpI	GCTNAGC	1 cut(s)	1314
BlsI	GCNGC	3 cut(s)	107, 568, 1037
Bme1390I	CCNGG	3 cut(s)	755, 804, 1052
BmgT120I	GGNCC	2 cut(s)	520, 521
BmiI	GGNNCC	3 cut(s)	522, 924, 1436
BmrFI	CCNGG	3 cut(s)	755, 804, 1052
BmrI	ACTGGG	2 cut(s)	367, 1125
BmsI	GCATC	8 cut(s)	235, 330, 335, 477, 1020, 1088, 1289, 1416
BmuI	ACTGGG	2 cut(s)	367, 1125
BpiI	GAAGAC	2 cut(s)	420, 1097
BpmI	CTGGAG	1 cut(s)	390
Bpu10I	CCTNAGC	1 cut(s)	927
Bpu1102I	GCTNAGC	1 cut(s)	1314
Bpu14I	TTCGAA	1 cut(s)	665
Bsa29I	ATCGAT	2 cut(s)	122, 1424
BsaI	GGTCTC	1 cut(s)	830
BsaJI	CCNNGG	3 cut(s)	188, 740, 753
BsaWI	WCCGGW	1 cut(s)	163
BsaXI	ACNNNNNCTCC	2 cut(s)	810, 840
Bsc4I	CCNNNNNNNGG	3 cut(s)	809, 1212, 1213
Bse118I	RCCGGY	1 cut(s)	163
Bse1I	ACTGG	4 cut(s)	362, 373, 648, 1120
Bse3DI	GCAATG	3 cut(s)	576, 648, 660
BseBI	CCWGG	3 cut(s)	755, 804, 1052
BseCI	ATCGAT	2 cut(s)	122, 1424
BseDI	CCNNGG	3 cut(s)	188, 740, 753
BseGI	GGATG	5 cut(s)	243, 340, 685, 1079, 1286
BseLI	CCNNNNNNNGG	3 cut(s)	809, 1212, 1213
BseMI	GCAATG	3 cut(s)	576, 648, 660
BseMII	CTCAG	6 cut(s)	192, 321, 795, 842, 1254, 1305
BseNI	ACTGG	4 cut(s)	362, 373, 648, 1120
BseSI	GKGCMC	2 cut(s)	524, 753
BseXI	GCAGC	2 cut(s)	117, 1047
BseYI	CCCAGC	2 cut(s)	29, 1031
BsgI	GTGCAG	1 cut(s)	624
Bsh1236I	CGCG	2 cut(s)	589, 1403
Bsh1285I	CGRYCG	1 cut(s)	994
BshFI	GGCC	7 cut(s)	17, 42, 193, 522, 908, 1050, 1196
BshNI	GGYRCC	2 cut(s)	922, 1434
BshTI	ACCGGT	1 cut(s)	163
BshVI	ATCGAT	2 cut(s)	122, 1424
BsiEI	CGRYCG	1 cut(s)	994
BsiSI	CCGG	2 cut(s)	164, 1190
BslFI	GGGAC	1 cut(s)	1394
BslI	CCNNNNNNNGG	3 cut(s)	809, 1212, 1213
BsmAI	GTCTC	2 cut(s)	830, 1161
BsmFI	GGGAC	1 cut(s)	1394
BsmI	GAATGC	1 cut(s)	813
BsnI	GGCC	7 cut(s)	17, 42, 193, 522, 908, 1050, 1196
Bso31I	GGTCTC	1 cut(s)	830
Bsp119I	TTCGAA	1 cut(s)	665
Bsp120I	GGGCCC	1 cut(s)	520
Bsp1286I	GDGCHC	2 cut(s)	524, 753
Bsp1407I	TGTACA	1 cut(s)	1281
Bsp143I	GATC	5 cut(s)	119, 123, 459, 991, 1421
Bsp1720I	GCTNAGC	1 cut(s)	1314
Bsp19I	CCATGG	2 cut(s)	188, 740
BspACI	CCGC	3 cut(s)	475, 567, 1403
BspANI	GGCC	7 cut(s)	17, 42, 193, 522, 908, 1050, 1196
BspCNI	CTCAG	6 cut(s)	191, 322, 794, 843, 1255, 1306
BspDI	ATCGAT	2 cut(s)	122, 1424
BspFNI	CGCG	2 cut(s)	589, 1403
BspLI	GGNNCC	3 cut(s)	522, 924, 1436
BspMI	ACCTGC	1 cut(s)	1293
BspPI	GGATC	2 cut(s)	127, 454
BspT104I	TTCGAA	1 cut(s)	665
BspT107I	GGYRCC	2 cut(s)	922, 1434
BspTI	CTTAAG	1 cut(s)	275
BspTNI	GGTCTC	1 cut(s)	830
BsrDI	GCAATG	3 cut(s)	576, 648, 660
BsrFI	RCCGGY	1 cut(s)	163
BsrGI	TGTACA	1 cut(s)	1281
BsrI	ACTGG	4 cut(s)	362, 373, 648, 1120
BssAI	RCCGGY	1 cut(s)	163
BssECI	CCNNGG	3 cut(s)	188, 740, 753
BssMI	GATC	5 cut(s)	119, 123, 459, 991, 1421
BssNAI	GTATAC	1 cut(s)	1223
BssT1I	CCWWGG	2 cut(s)	188, 740
Bst1107I	GTATAC	1 cut(s)	1223
Bst2UI	CCWGG	3 cut(s)	755, 804, 1052
Bst4CI	ACNGT	5 cut(s)	133, 619, 697, 724, 1434
Bst6I	CTCTTC	1 cut(s)	201
BstAFI	CTTAAG	1 cut(s)	275
BstAUI	TGTACA	1 cut(s)	1281
BstBI	TTCGAA	1 cut(s)	665
BstC8I	GCNNGC	5 cut(s)	52, 224, 345, 1327, 1405
BstDEI	CTNAG	8 cut(s)	178, 330, 781, 851, 891, 927, 1263, 1314
BstDSI	CCRYGG	2 cut(s)	188, 740
BstENI	CCTNNNNNAGG	1 cut(s)	807
BstF5I	GGATG	5 cut(s)	243, 340, 685, 1079, 1286
BstFNI	CGCG	2 cut(s)	589, 1403
BstHHI	GCGC	1 cut(s)	589
BstKTI	GATC	5 cut(s)	122, 126, 462, 994, 1424
BstMAI	GTCTC	2 cut(s)	830, 1161
BstMBI	GATC	5 cut(s)	119, 123, 459, 991, 1421
BstMCI	CGRYCG	1 cut(s)	994
BstMWI	GCNNNNNNNGC	2 cut(s)	1041, 1056
BstNI	CCWGG	3 cut(s)	755, 804, 1052
BstSCI	CCNGG	3 cut(s)	753, 802, 1050
BstSFI	CTRYAG	1 cut(s)	1210
BstSLI	GKGCMC	2 cut(s)	524, 753
BstUI	CGCG	2 cut(s)	589, 1403
BstV1I	GCAGC	2 cut(s)	117, 1047
BstV2I	GAAGAC	2 cut(s)	420, 1097
BstZ17I	GTATAC	1 cut(s)	1223
Bsu15I	ATCGAT	2 cut(s)	122, 1424
BsuRI	GGCC	7 cut(s)	17, 42, 193, 522, 908, 1050, 1196
BsuTUI	ATCGAT	2 cut(s)	122, 1424
BtgI	CCRYGG	2 cut(s)	188, 740
BtsCI	GGATG	5 cut(s)	243, 340, 685, 1079, 1286
BtsIMutI	CAGTG	3 cut(s)	207, 355, 641
BveI	ACCTGC	1 cut(s)	1293
Cac8I	GCNNGC	5 cut(s)	52, 224, 345, 1327, 1405
CfoI	GCGC	1 cut(s)	589
Cfr10I	RCCGGY	1 cut(s)	163
Cfr13I	GGNCC	2 cut(s)	520, 521
ClaI	ATCGAT	2 cut(s)	122, 1424
Csp6I	GTAC	6 cut(s)	58, 913, 923, 1282, 1435, 1451
CspAI	ACCGGT	1 cut(s)	163
CspCI	CAANNNNNGTGG	2 cut(s)	286, 321
CviAII	CATG	4 cut(s)	189, 690, 741, 1226
CviQI	GTAC	6 cut(s)	58, 913, 923, 1282, 1435, 1451
DdeI	CTNAG	8 cut(s)	178, 330, 781, 851, 891, 927, 1263, 1314
DpnI	GATC	5 cut(s)	121, 125, 461, 993, 1423
DpnII	GATC	5 cut(s)	119, 123, 459, 991, 1421
EaeI	YGGCCR	4 cut(s)	15, 191, 906, 1048
Eam1104I	CTCTTC	1 cut(s)	201
EarI	CTCTTC	1 cut(s)	201
Eco130I	CCWWGG	2 cut(s)	188, 740
Eco24I	GRGCYC	1 cut(s)	524
Eco31I	GGTCTC	1 cut(s)	830
Eco57I	CTGAAG	3 cut(s)	183, 183, 1024
EcoNI	CCTNNNNNAGG	1 cut(s)	807
EcoO109I	RGGNCCY	1 cut(s)	520
EcoRI	GAATTC	2 cut(s)	503, 1233
EcoRII	CCWGG	3 cut(s)	753, 802, 1050
EcoT14I	CCWWGG	2 cut(s)	188, 740
EcoT38I	GRGCYC	1 cut(s)	524
ErhI	CCWWGG	2 cut(s)	188, 740
FaeI	CATG	4 cut(s)	192, 693, 744, 1229
FaqI	GGGAC	1 cut(s)	1394
FatI	CATG	4 cut(s)	188, 689, 740, 1225
FauI	CCCGC	1 cut(s)	1396
FauNDI	CATATG	1 cut(s)	253
FblI	GTMKAC	3 cut(s)	140, 168, 1222
Fnu4HI	GCNGC	3 cut(s)	106, 567, 1036
FokI	GGATG	5 cut(s)	230, 347, 672, 1066, 1273
FriOI	GRGCYC	1 cut(s)	524
Fsp4HI	GCNGC	3 cut(s)	106, 567, 1036
FspBI	CTAG	2 cut(s)	219, 1244
GlaI	GCGC	1 cut(s)	588
GluI	GCNGC	3 cut(s)	106, 567, 1036
GsaI	CCCAGC	2 cut(s)	33, 1035
GsuI	CTGGAG	1 cut(s)	390
HaeIII	GGCC	7 cut(s)	17, 42, 193, 522, 908, 1050, 1196
HapII	CCGG	2 cut(s)	164, 1190
HhaI	GCGC	1 cut(s)	589
Hin1II	CATG	4 cut(s)	192, 693, 744, 1229
Hin6I	GCGC	1 cut(s)	587
HinP1I	GCGC	1 cut(s)	587
HindIII	AAGCTT	2 cut(s)	345, 896
HinfI	GANTC	5 cut(s)	95, 137, 352, 793, 996
HpaII	CCGG	2 cut(s)	164, 1190
HphI	GGTGA	4 cut(s)	818, 837, 1114, 1139
Hpy166II	GTNNAC	8 cut(s)	60, 141, 169, 442, 451, 1223, 1284, 1372
Hpy188I	TCNGA	8 cut(s)	181, 331, 633, 784, 852, 1264, 1291, 1419
Hpy188III	TCNNGA	5 cut(s)	500, 598, 728, 944, 1169
Hpy8I	GTNNAC	8 cut(s)	60, 141, 169, 442, 451, 1223, 1284, 1372
HpyAV	CCTTC	5 cut(s)	314, 803, 1049, 1064, 1449
HpyCH4III	ACNGT	5 cut(s)	133, 619, 697, 724, 1434
HpyCH4IV	ACGT	1 cut(s)	1337
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1041, 1056
HpyF3I	CTNAG	8 cut(s)	178, 330, 781, 851, 891, 927, 1263, 1314
HpySE526I	ACGT	1 cut(s)	1337
Hsp92II	CATG	4 cut(s)	192, 693, 744, 1229
HspAI	GCGC	1 cut(s)	587
KpnI	GGTACC	2 cut(s)	926, 1438
Kzo9I	GATC	5 cut(s)	119, 123, 459, 991, 1421
LmnI	GCTCC	3 cut(s)	26, 153, 389
Lsp1109I	GCAGC	2 cut(s)	117, 1047
LweI	GCATC	8 cut(s)	235, 330, 335, 477, 1020, 1088, 1289, 1416
MaeI	CTAG	2 cut(s)	219, 1244
MaeII	ACGT	1 cut(s)	1337
MaeIII	GTNAC	4 cut(s)	353, 590, 613, 1338
MalI	GATC	5 cut(s)	121, 125, 461, 993, 1423
MboI	GATC	5 cut(s)	119, 123, 459, 991, 1421
MboII	GAAGA	6 cut(s)	189, 218, 425, 728, 932, 1102
MhlI	GDGCHC	2 cut(s)	524, 753
MlsI	TGGCCA	2 cut(s)	193, 908
MluCI	AATT	8 cut(s)	173, 287, 503, 699, 837, 869, 1233, 1251
MluNI	TGGCCA	2 cut(s)	193, 908
MlyI	GAGTC	3 cut(s)	146, 361, 1005
MmeI	TCCRAC	1 cut(s)	604
Mox20I	TGGCCA	2 cut(s)	193, 908
MroXI	GAANNNNTTC	1 cut(s)	813
MscI	TGGCCA	2 cut(s)	193, 908
MseI	TTAA	2 cut(s)	276, 771
MslI	CAYNNNNRTG	5 cut(s)	299, 360, 653, 1151, 1352
Msp20I	TGGCCA	2 cut(s)	193, 908
MspCI	CTTAAG	1 cut(s)	275
MspI	CCGG	2 cut(s)	164, 1190
MspR9I	CCNGG	3 cut(s)	755, 804, 1052
Mva1269I	GAATGC	1 cut(s)	813
MvaI	CCWGG	3 cut(s)	755, 804, 1052
MvnI	CGCG	2 cut(s)	589, 1403
MwoI	GCNNNNNNNGC	2 cut(s)	1041, 1056
NcoI	CCATGG	2 cut(s)	188, 740
NdeI	CATATG	1 cut(s)	253
NdeII	GATC	5 cut(s)	119, 123, 459, 991, 1421
NlaIII	CATG	4 cut(s)	192, 693, 744, 1229
NlaIV	GGNNCC	3 cut(s)	522, 924, 1436
NmuCI	GTSAC	1 cut(s)	353
NspV	TTCGAA	1 cut(s)	665
OliI	CACNNNNGTG	2 cut(s)	299, 360
PaqCI	CACCTGC	1 cut(s)	1293
PctI	GAATGC	1 cut(s)	813
PdmI	GAANNNNTTC	1 cut(s)	813
PfeI	GAWTC	2 cut(s)	95, 793
PinAI	ACCGGT	1 cut(s)	163
PkrI	GCNGC	3 cut(s)	107, 568, 1037
Ple19I	CGATCG	1 cut(s)	994
PleI	GAGTC	3 cut(s)	145, 360, 1004
PpsI	GAGTC	3 cut(s)	145, 360, 1004
Psp6I	CCWGG	3 cut(s)	753, 802, 1050
PspFI	CCCAGC	2 cut(s)	29, 1031
PspGI	CCWGG	3 cut(s)	753, 802, 1050
PspN4I	GGNNCC	3 cut(s)	522, 924, 1436
PspOMI	GGGCCC	1 cut(s)	520
PspPI	GGNCC	2 cut(s)	520, 521
PvuI	CGATCG	1 cut(s)	994
RsaI	GTAC	6 cut(s)	59, 914, 924, 1283, 1436, 1452
RsaNI	GTAC	6 cut(s)	58, 913, 923, 1282, 1435, 1451
RseI	CAYNNNNRTG	5 cut(s)	299, 360, 653, 1151, 1352
SaqAI	TTAA	2 cut(s)	276, 771
SatI	GCNGC	3 cut(s)	106, 567, 1036
Sau3AI	GATC	5 cut(s)	119, 123, 459, 991, 1421
Sau96I	GGNCC	2 cut(s)	520, 521
SchI	GAGTC	3 cut(s)	146, 361, 1005
ScrFI	CCNGG	3 cut(s)	755, 804, 1052
SduI	GDGCHC	2 cut(s)	524, 753
SfaNI	GCATC	8 cut(s)	235, 330, 335, 477, 1020, 1088, 1289, 1416
SfcI	CTRYAG	1 cut(s)	1210
SfuI	TTCGAA	1 cut(s)	665
SmiMI	CAYNNNNRTG	5 cut(s)	299, 360, 653, 1151, 1352
SmlI	CTYRAG	1 cut(s)	275
SmoI	CTYRAG	1 cut(s)	275
Sse9I	AATT	8 cut(s)	173, 287, 503, 699, 837, 869, 1233, 1251
SsiI	CCGC	3 cut(s)	475, 567, 1403
SspMI	CTAG	2 cut(s)	219, 1244
StyD4I	CCNGG	3 cut(s)	753, 802, 1050
StyI	CCWWGG	2 cut(s)	188, 740
TaaI	ACNGT	5 cut(s)	133, 619, 697, 724, 1434
TaiI	ACGT	1 cut(s)	1340
TaqI	TCGA	5 cut(s)	122, 291, 665, 994, 1424
TasI	AATT	8 cut(s)	173, 287, 503, 699, 837, 869, 1233, 1251
TatI	WGTACW	2 cut(s)	57, 1281
TauI	GCSGC	1 cut(s)	569
TfiI	GAWTC	2 cut(s)	95, 793
Tru1I	TTAA	2 cut(s)	276, 771
Tru9I	TTAA	2 cut(s)	276, 771
TscAI	CASTG	3 cut(s)	207, 362, 648
TseFI	GTSAC	1 cut(s)	353
TseI	GCWGC	2 cut(s)	105, 1035
Tsp45I	GTSAC	1 cut(s)	353
TspDTI	ATGAA	3 cut(s)	333, 785, 1431
TspGWI	ACGGA	2 cut(s)	930, 1398
TspRI	CASTG	3 cut(s)	207, 362, 648
Vha464I	CTTAAG	1 cut(s)	275
XagI	CCTNNNNNAGG	1 cut(s)	807
XapI	RAATTY	4 cut(s)	287, 503, 869, 1233
XcmI	CCANNNNNNNNNTGG	1 cut(s)	916
XmiI	GTMKAC	3 cut(s)	140, 168, 1222
XmnI	GAANNNNTTC	1 cut(s)	813
XspI	CTAG	2 cut(s)	219, 1244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.