Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0000948

Physical Location & Seq

Genomic Coordinates Reverse (-)

45703238 .. 45706037

Gene Structure 2800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG245700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGGGAAAAAGGTGGCCATAATAGGAGCTGGGATCAGTGGCCTTCTTGCCTGCAAGTACACCCTTTCAAAGGGCTTTCAACCCATCGTGTTCGAATCCTCGAGCACCATCGGAGGGGTATGGACCAAAACTTTTGAGAGTACCAAGCTCCAAACTCCTAAAGCAGTCTACCAATTCTCAGATTTTCCATGGCCTTCTTCAGTGACAGAAGACTTTCCAAACCAGCATCAAGTTATGGATTACATCCAGTCATACGCTCAACATTTCGACTTGCTCAGGCACATCAAATTCAATACCAAAGTGTGTGGTATAGAGTATGAAGGTCCATCTGAGGATGAGATGCAATTATGGAGTCTCTGGGCCGGCACCGGTGAGCCTTTCAGCTCGAAAGGGAAATGGAAAGTTACGCTAGAAGACAAACAAAGCCCTTCAACTGAGGTTTACTTGGTAGACTTTTTAGTCCTCTGCATTGGACGATTCAGTGGTATTCCAAACATTCCCAAATTTCCTCCGAACAAGGGTCCAGAAGAATTTCATGGCGAGGTCATACACTCGATGGAATATGCTTCCAAGGATTACGAAAGCGCCGCTGAATTTGTGAAAGGAAAGCAAGTAACAGTTGTTGGGTTTCAGAAATCTGCATTGGACATTGCAATGGAGTGCTCAAATGCAAATGGGGTAGAACATCCATGTACAGTGTTGTACAAGACAGAACACTGGAATGTTCCTGACTATCTCCCATGGGGTGTGCCTCTGGCGTACTTATACCTCAATCGCTTCTCGGAGCTTTTGGTTCATAAGCCGGGTGAAGGCCTCCTACTCAGTCTCCTTGCAACAATTCTTTCACCTCTGGGATGGGCATTTTCAAAATTTGTTGAAACCTACATAGATAAGAAGCTTGGGTTATCCAAGTATGGAATGGTACCAAAGCATAGTTTCCTTCAAGAAATCAGTTCCTGTCTGATCTCAACCGTGCCTGAAAAATTCTATGACCGAGTCCAAGAAGGACGCATTTTACTTAAGAAATCTCCCAAAAGCTTCAGCTTTTGCCAAGAAGGCATTTTGGTTGAAGGAGAAAACTCCCCTGTAAAGACAGATTTGGTCATATTGGCTACTGGATTTAGAGGTGATGAGAAGCTTAAAGACATCTTTGTGTCACCAACATTTCAAGACTACATAGCTGGATCACCCAAGTCCACTTTACCTCTCTACAGGGAATGCATCCATGGACGAATTCCACAACTAGCTGTAATTGGATTCTCCGAGAGTGTCTCAAACTTGTACACATCCGAGATGAGGTGCAGATGGCTAGCAGAGCTTCTTGGAGGCACATTCAAGGTACCAAGCATAAAAGACATGGAGAAAGATGTGAACCAATGGGATGAGTATGCCAAGCGATATTCCGGAAAATACTACCGCAGATCATGCATCGGAGCACTGCACATATGGTACAATGACCAATTGTGCAAGGATATGGGTTGGAATCCCAAAAGGAAGAAGGGACTTGCTGAACTATTTGAGCCTTATGGCCCAACGGATTATATTTCCATTATAAGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004497 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009626 GO:0009627 GO:0009628 GO:0009814 GO:0009870 GO:0009987 GO:0010204 GO:0012501 GO:0016491 GO:0023052 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0036293 GO:0036294 GO:0042221 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0080134 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00982 ko01120 map00982 map01120

Pfam Domains

Protein Families

FMO-like

Protein Analysis

520

Amino Acids

58.79

Weight (kDa)

6.84

Isoelectric Point (pI)

44.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FMO-like	PF00743	3 - 496	5.3e-45	Flavin-binding monooxygenase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000948)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16430 FvH4_2g16450
malus_domestica	MD00G1083300.v1.1 MD00G1083500.v1.1 MD05G1133000.v1.1 MD16G1203500.v1.1 MD16G1203700.v1.1
prunus_persica	Prupe.8G177000_v2.0.a1 Prupe.8G177100_v2.0.a1
pyrus_communis	pycom05g13010 pycom05g13030 pycom05g13040
rosa_chinensis	RchiOBHm_Chr6g0280221 RchiOBHm_Chr6g0280281 RchiOBHm_Chr6g0280291 RchiOBHm_Chr6g0280311 RchiOBHm_Chr6g0280341
rosa_laevigata	RLG00000013067 RLG00000013073 RLG00000013075 RLG00000013076
rosa_multiflora	Rmu_sc0000757.1_g000002 Rmu_sc0001572.1_g000020 Rmu_sc0001572.1_g000034 Rmu_sc0002826.1_g000002 Rmu_sc0002858.1_g000010 Rmu_sc0002858.1_g000031 Rmu_sc0004211.1_g000005 Rmu_sc0010624.1_g000006
rosa_roxburghii	Rroxscaffold_7G00188150 Rroxscaffold_7G00188190 Rroxscaffold_7G00188220 Rroxscaffold_7G00188230 Rroxscaffold_7G00188240 Rroxscaffold_7G00188270 Rroxscaffold_7G00188290
rosa_rugosa	Rorug06G0130900 Rorug06G0131200 Rorug06G0131200 Rorug06G0131200 Rorug06G0131500
rosa_samantha	Rh6AG241200 Rh6AG241800 Rh6AG241900 Rh6AG242100 Rh6AG242200 Rh6AG242700 Rh6AG242900 Rh6BG244800 Rh6BG245400 Rh6BG245500 Rh6BG245700 Rh6CG246700 Rh6CG247000 Rh6DG237500 Rh6DG238000 Rh6DG238300 Rh6DG238600
rosa_wichuraiana	Rw5G027390 Rw6G021000 Rw6G021020 Rw6G021040 Rw6G021070 Rw6G021120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1553
AasI	GACNNNNNNGTC	1 cut(s)	458
Acc65I	GGTACC	2 cut(s)	922, 1339
AccB1I	GGYRCC	3 cut(s)	365, 922, 1339
AccI	GTMKAC	2 cut(s)	168, 450
AccIII	TCCGGA	1 cut(s)	1403
AciI	CCGC	2 cut(s)	588, 1417
AclWI	GGATC	2 cut(s)	41, 1192
AcoI	YGGCCR	1 cut(s)	15
AcsI	RAATTY	7 cut(s)	287, 503, 530, 593, 869, 983, 1233
AcuI	CTGAAG	2 cut(s)	183, 1024
AfaI	GTAC	9 cut(s)	59, 142, 694, 704, 761, 924, 1283, 1341, 1451
AfiI	CCNNNNNNNGG	5 cut(s)	70, 114, 518, 809, 1296
AflII	CTTAAG	1 cut(s)	1019
AgeI	ACCGGT	1 cut(s)	368
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
Alw21I	GWGCWC	3 cut(s)	107, 665, 1438
Alw26I	GTCTC	3 cut(s)	359, 830, 1276
AlwI	GGATC	2 cut(s)	41, 1192
AlwNI	CAGNNNCTG	1 cut(s)	957
Ama87I	CYCGRG	1 cut(s)	100
Aor13HI	TCCGGA	1 cut(s)	1403
AoxI	GGCC	6 cut(s)	15, 40, 191, 360, 811, 1528
ApoI	RAATTY	7 cut(s)	287, 503, 530, 593, 869, 983, 1233
AsiGI	ACCGGT	1 cut(s)	368
Asp700I	GAANNNNTTC	2 cut(s)	213, 531
Asp718I	GGTACC	2 cut(s)	922, 1339
AspLEI	GCGC	1 cut(s)	587
AspS9I	GGNCC	5 cut(s)	123, 323, 360, 521, 1529
AsuC2I	CCSGG	1 cut(s)	804
AsuHPI	GGTGA	6 cut(s)	383, 818, 837, 1139, 1149, 1179
AsuII	TTCGAA	1 cut(s)	93
AsuNHI	GCTAGC	1 cut(s)	1309
AvaI	CYCGRG	1 cut(s)	100
AvaII	GGWCC	3 cut(s)	123, 323, 521
BalI	TGGCCA	1 cut(s)	17
BanI	GGYRCC	3 cut(s)	365, 922, 1339
BarI	GAAGNNNNNNTAC	2 cut(s)	801, 833
BbsI	GAAGAC	2 cut(s)	216, 420
Bbv12I	GWGCWC	3 cut(s)	107, 665, 1438
BccI	CCATC	6 cut(s)	92, 116, 334, 550, 849, 1299
BcnI	CCSGG	1 cut(s)	804
BcoDI	GTCTC	3 cut(s)	359, 830, 1276
BfaI	CTAG	3 cut(s)	410, 1244, 1310
BfmI	CTRYAG	1 cut(s)	1210
BfoI	RGCGCY	1 cut(s)	588
BfrI	CTTAAG	1 cut(s)	1019
BglI	GCCNNNNNGGC	1 cut(s)	1056
BisI	GCNGC	1 cut(s)	588
BlsI	GCNGC	1 cut(s)	589
Bme1390I	CCNGG	1 cut(s)	804
Bme18I	GGWCC	3 cut(s)	123, 323, 521
BmeT110I	CYCGRG	1 cut(s)	100
BmgT120I	GGNCC	5 cut(s)	123, 323, 360, 521, 1529
BmiI	GGNNCC	4 cut(s)	367, 522, 924, 1341
BmrFI	CCNGG	1 cut(s)	804
BmsI	GCATC	4 cut(s)	235, 330, 1230, 1437
BmtI	GCTAGC	1 cut(s)	1313
BpiI	GAAGAC	2 cut(s)	216, 420
BplI	GAGNNNNNCTC	2 cut(s)	1256, 1288
Bpu10I	CCTNAGC	1 cut(s)	275
Bpu14I	TTCGAA	1 cut(s)	93
BpuMI	CCSGG	1 cut(s)	804
BsaJI	CCNNGG	4 cut(s)	188, 570, 740, 1225
BsaWI	WCCGGW	2 cut(s)	368, 1403
BsaXI	ACNNNNNCTCC	2 cut(s)	810, 840
Bsc4I	CCNNNNNNNGG	5 cut(s)	70, 114, 518, 809, 1296
Bse118I	RCCGGY	2 cut(s)	362, 368
Bse1I	ACTGG	3 cut(s)	247, 722, 1120
Bse3DI	GCAATG	2 cut(s)	648, 660
BseAI	TCCGGA	1 cut(s)	1403
BseDI	CCNNGG	4 cut(s)	188, 570, 740, 1225
BseGI	GGATG	7 cut(s)	243, 340, 685, 860, 1221, 1286, 1387
BseLI	CCNNNNNNNGG	5 cut(s)	70, 114, 518, 809, 1296
BseMI	GCAATG	2 cut(s)	648, 660
BseMII	CTCAG	5 cut(s)	192, 289, 321, 426, 835
BseNI	ACTGG	3 cut(s)	247, 722, 1120
BseYI	CCCAGC	1 cut(s)	29
BsgI	GTGCAG	2 cut(s)	1321, 1424
BshFI	GGCC	6 cut(s)	17, 42, 193, 362, 813, 1530
BshNI	GGYRCC	3 cut(s)	365, 922, 1339
BshTI	ACCGGT	1 cut(s)	368
BsiHKAI	GWGCWC	3 cut(s)	107, 665, 1438
BsiHKCI	CYCGRG	1 cut(s)	100
BsiSI	CCGG	4 cut(s)	363, 369, 803, 1404
BslFI	GGGAC	1 cut(s)	1515
BslI	CCNNNNNNNGG	5 cut(s)	70, 114, 518, 809, 1296
BsmAI	GTCTC	3 cut(s)	359, 830, 1276
BsmFI	GGGAC	1 cut(s)	1515
BsmI	GAATGC	1 cut(s)	1223
BsnI	GGCC	6 cut(s)	17, 42, 193, 362, 813, 1530
BsoBI	CYCGRG	1 cut(s)	100
Bsp119I	TTCGAA	1 cut(s)	93
Bsp1286I	GDGCHC	3 cut(s)	107, 665, 1438
Bsp13I	TCCGGA	1 cut(s)	1403
Bsp1407I	TGTACA	3 cut(s)	692, 702, 1281
Bsp143I	GATC	4 cut(s)	33, 963, 1184, 1421
Bsp19I	CCATGG	3 cut(s)	188, 740, 1225
BspACI	CCGC	2 cut(s)	588, 1417
BspANI	GGCC	6 cut(s)	17, 42, 193, 362, 813, 1530
BspCNI	CTCAG	5 cut(s)	191, 288, 322, 427, 834
BspEI	TCCGGA	1 cut(s)	1403
BspLI	GGNNCC	4 cut(s)	367, 522, 924, 1341
BspOI	GCTAGC	1 cut(s)	1313
BspPI	GGATC	2 cut(s)	41, 1192
BspT104I	TTCGAA	1 cut(s)	93
BspT107I	GGYRCC	3 cut(s)	365, 922, 1339
BspTI	CTTAAG	1 cut(s)	1019
BsrDI	GCAATG	2 cut(s)	648, 660
BsrFI	RCCGGY	2 cut(s)	362, 368
BsrGI	TGTACA	3 cut(s)	692, 702, 1281
BsrI	ACTGG	3 cut(s)	247, 722, 1120
BssAI	RCCGGY	2 cut(s)	362, 368
BssECI	CCNNGG	4 cut(s)	188, 570, 740, 1225
BssMI	GATC	4 cut(s)	33, 963, 1184, 1421
BssT1I	CCWWGG	4 cut(s)	188, 570, 740, 1225
Bst4CI	ACNGT	3 cut(s)	619, 697, 973
BstAFI	CTTAAG	1 cut(s)	1019
BstAPI	GCANNNNNTGC	1 cut(s)	1425
BstAUI	TGTACA	3 cut(s)	692, 702, 1281
BstBI	TTCGAA	1 cut(s)	93
BstC8I	GCNNGC	3 cut(s)	52, 364, 1311
BstDEI	CTNAG	5 cut(s)	178, 275, 330, 435, 821
BstDSI	CCRYGG	3 cut(s)	188, 740, 1225
BstENI	CCTNNNNNAGG	1 cut(s)	68
BstF5I	GGATG	7 cut(s)	243, 340, 685, 860, 1221, 1286, 1387
BstH2I	RGCGCY	1 cut(s)	588
BstHHI	GCGC	1 cut(s)	587
BstKTI	GATC	4 cut(s)	36, 966, 1187, 1424
BstMAI	GTCTC	3 cut(s)	359, 830, 1276
BstMBI	GATC	4 cut(s)	33, 963, 1184, 1421
BstMWI	GCNNNNNNNGC	3 cut(s)	1056, 1315, 1425
BstSCI	CCNGG	1 cut(s)	802
BstSFI	CTRYAG	1 cut(s)	1210
BstV2I	GAAGAC	2 cut(s)	216, 420
BsuRI	GGCC	6 cut(s)	17, 42, 193, 362, 813, 1530
BtgI	CCRYGG	3 cut(s)	188, 740, 1225
BtsCI	GGATG	7 cut(s)	243, 340, 685, 860, 1221, 1286, 1387
BtsI	GCAGTG	1 cut(s)	1436
BtsIMutI	CAGTG	6 cut(s)	43, 207, 487, 702, 715, 1436
Cac8I	GCNNGC	3 cut(s)	52, 364, 1311
CaiI	CAGNNNCTG	1 cut(s)	957
CfoI	GCGC	1 cut(s)	587
Cfr10I	RCCGGY	2 cut(s)	362, 368
Cfr13I	GGNCC	5 cut(s)	123, 323, 360, 521, 1529
CseI	GACGC	1 cut(s)	1017
Csp6I	GTAC	9 cut(s)	58, 141, 693, 703, 760, 923, 1282, 1340, 1450
CspAI	ACCGGT	1 cut(s)	368
CspCI	CAANNNNNGTGG	2 cut(s)	286, 321
CviAII	CATG	7 cut(s)	189, 536, 690, 741, 1226, 1357, 1425
CviQI	GTAC	9 cut(s)	58, 141, 693, 703, 760, 923, 1282, 1340, 1450
DdeI	CTNAG	5 cut(s)	178, 275, 330, 435, 821
DpnI	GATC	4 cut(s)	35, 965, 1186, 1423
DpnII	GATC	4 cut(s)	33, 963, 1184, 1421
DrdI	GACNNNNNNGTC	1 cut(s)	458
DseDI	GACNNNNNNGTC	1 cut(s)	458
EaeI	YGGCCR	1 cut(s)	15
Eco130I	CCWWGG	4 cut(s)	188, 570, 740, 1225
Eco147I	AGGCCT	1 cut(s)	813
Eco47I	GGWCC	3 cut(s)	123, 323, 521
Eco57I	CTGAAG	2 cut(s)	183, 1024
Eco88I	CYCGRG	1 cut(s)	100
EcoNI	CCTNNNNNAGG	1 cut(s)	68
EcoRI	GAATTC	1 cut(s)	1233
EcoT14I	CCWWGG	4 cut(s)	188, 570, 740, 1225
EcoT22I	ATGCAT	2 cut(s)	1223, 1430
ErhI	CCWWGG	4 cut(s)	188, 570, 740, 1225
FaeI	CATG	7 cut(s)	192, 539, 693, 744, 1229, 1360, 1428
FaqI	GGGAC	1 cut(s)	1515
FatI	CATG	7 cut(s)	188, 535, 689, 740, 1225, 1356, 1424
FauNDI	CATATG	1 cut(s)	1445
FblI	GTMKAC	2 cut(s)	168, 450
Fnu4HI	GCNGC	1 cut(s)	588
FokI	GGATG	7 cut(s)	230, 347, 672, 867, 1208, 1273, 1394
Fsp4HI	GCNGC	1 cut(s)	588
FspBI	CTAG	3 cut(s)	410, 1244, 1310
GlaI	GCGC	1 cut(s)	586
GluI	GCNGC	1 cut(s)	588
GsaI	CCCAGC	1 cut(s)	33
HaeII	RGCGCY	1 cut(s)	588
HaeIII	GGCC	6 cut(s)	17, 42, 193, 362, 813, 1530
HapII	CCGG	4 cut(s)	363, 369, 803, 1404
HgaI	GACGC	1 cut(s)	1017
HhaI	GCGC	1 cut(s)	587
Hin1II	CATG	7 cut(s)	192, 539, 693, 744, 1229, 1360, 1428
Hin6I	GCGC	1 cut(s)	585
HinP1I	GCGC	1 cut(s)	585
HindIII	AAGCTT	3 cut(s)	896, 1036, 1136
HinfI	GANTC	6 cut(s)	95, 352, 477, 996, 1257, 1483
HpaII	CCGG	4 cut(s)	363, 369, 803, 1404
HphI	GGTGA	6 cut(s)	383, 818, 837, 1139, 1149, 1179
Hpy166II	GTNNAC	7 cut(s)	60, 169, 442, 451, 1197, 1284, 1372
Hpy188III	TCNNGA	5 cut(s)	524, 728, 944, 1169, 1404
Hpy8I	GTNNAC	7 cut(s)	60, 169, 442, 451, 1197, 1284, 1372
HpyCH4III	ACNGT	3 cut(s)	619, 697, 973
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1056, 1315, 1425
HpyF3I	CTNAG	5 cut(s)	178, 275, 330, 435, 821
Hsp92II	CATG	7 cut(s)	192, 539, 693, 744, 1229, 1360, 1428
HspAI	GCGC	1 cut(s)	585
Kpn2I	TCCGGA	1 cut(s)	1403
KpnI	GGTACC	2 cut(s)	926, 1343
KroI	GCCGGC	1 cut(s)	362
KroNI	GCCGGC	1 cut(s)	364
Kzo9I	GATC	4 cut(s)	33, 963, 1184, 1421
LmnI	GCTCC	4 cut(s)	26, 153, 784, 1433
LweI	GCATC	4 cut(s)	235, 330, 1230, 1437
MaeI	CTAG	3 cut(s)	410, 1244, 1310
MaeIII	GTNAC	4 cut(s)	202, 403, 613, 1155
MalI	GATC	4 cut(s)	35, 965, 1186, 1423
MboI	GATC	4 cut(s)	33, 963, 1184, 1421
MboII	GAAGA	5 cut(s)	189, 221, 425, 539, 1507
MfeI	CAATTG	1 cut(s)	1460
MhlI	GDGCHC	3 cut(s)	107, 665, 1438
MlsI	TGGCCA	1 cut(s)	17
MluNI	TGGCCA	1 cut(s)	17
MlyI	GAGTC	2 cut(s)	361, 1005
MmeI	TCCRAC	1 cut(s)	1460
Mox20I	TGGCCA	1 cut(s)	17
Mph1103I	ATGCAT	2 cut(s)	1223, 1430
MroI	TCCGGA	1 cut(s)	1403
MroNI	GCCGGC	1 cut(s)	362
MroXI	GAANNNNTTC	2 cut(s)	213, 531
MscI	TGGCCA	1 cut(s)	17
MseI	TTAA	2 cut(s)	1020, 1140
MslI	CAYNNNNRTG	3 cut(s)	653, 720, 1151
Msp20I	TGGCCA	1 cut(s)	17
MspA1I	CMGCKG	1 cut(s)	590
MspCI	CTTAAG	1 cut(s)	1019
MspI	CCGG	4 cut(s)	363, 369, 803, 1404
MspR9I	CCNGG	1 cut(s)	804
MunI	CAATTG	1 cut(s)	1460
Mva1269I	GAATGC	1 cut(s)	1223
MwoI	GCNNNNNNNGC	3 cut(s)	1056, 1315, 1425
NaeI	GCCGGC	1 cut(s)	364
NciI	CCSGG	1 cut(s)	804
NcoI	CCATGG	3 cut(s)	188, 740, 1225
NdeI	CATATG	1 cut(s)	1445
NdeII	GATC	4 cut(s)	33, 963, 1184, 1421
NgoMIV	GCCGGC	1 cut(s)	362
NheI	GCTAGC	1 cut(s)	1309
NlaIII	CATG	7 cut(s)	192, 539, 693, 744, 1229, 1360, 1428
NlaIV	GGNNCC	4 cut(s)	367, 522, 924, 1341
NmuCI	GTSAC	2 cut(s)	202, 1155
NsiI	ATGCAT	2 cut(s)	1223, 1430
NspV	TTCGAA	1 cut(s)	93
PaeR7I	CTCGAG	1 cut(s)	100
PceI	AGGCCT	1 cut(s)	813
PctI	GAATGC	1 cut(s)	1223
PdiI	GCCGGC	1 cut(s)	364
PdmI	GAANNNNTTC	2 cut(s)	213, 531
PfeI	GAWTC	4 cut(s)	95, 477, 1257, 1483
PflFI	GACNNNGTC	1 cut(s)	995
PinAI	ACCGGT	1 cut(s)	368
PkrI	GCNGC	1 cut(s)	589
PleI	GAGTC	2 cut(s)	360, 1004
PpsI	GAGTC	2 cut(s)	360, 1004
PsiI	TTATAA	1 cut(s)	1553
PspFI	CCCAGC	1 cut(s)	29
PspN4I	GGNNCC	4 cut(s)	367, 522, 924, 1341
PspPI	GGNCC	5 cut(s)	123, 323, 360, 521, 1529
PspXI	VCTCGAGB	1 cut(s)	100
PstNI	CAGNNNCTG	1 cut(s)	957
PsyI	GACNNNGTC	1 cut(s)	995
RsaI	GTAC	9 cut(s)	59, 142, 694, 704, 761, 924, 1283, 1341, 1451
RsaNI	GTAC	9 cut(s)	58, 141, 693, 703, 760, 923, 1282, 1340, 1450
RseI	CAYNNNNRTG	3 cut(s)	653, 720, 1151
SaqAI	TTAA	2 cut(s)	1020, 1140
SatI	GCNGC	1 cut(s)	588
Sau3AI	GATC	4 cut(s)	33, 963, 1184, 1421
Sau96I	GGNCC	5 cut(s)	123, 323, 360, 521, 1529
SchI	GAGTC	2 cut(s)	361, 1005
ScrFI	CCNGG	1 cut(s)	804
SduI	GDGCHC	3 cut(s)	107, 665, 1438
SfaNI	GCATC	4 cut(s)	235, 330, 1230, 1437
SfcI	CTRYAG	1 cut(s)	1210
Sfr274I	CTCGAG	1 cut(s)	100
SfuI	TTCGAA	1 cut(s)	93
SgrAI	CRCCGGYG	1 cut(s)	368
SinI	GGWCC	3 cut(s)	123, 323, 521
SlaI	CTCGAG	1 cut(s)	100
SmiMI	CAYNNNNRTG	3 cut(s)	653, 720, 1151
SmlI	CTYRAG	2 cut(s)	100, 1019
SmoI	CTYRAG	2 cut(s)	100, 1019
SseBI	AGGCCT	1 cut(s)	813
SsiI	CCGC	2 cut(s)	588, 1417
SspMI	CTAG	3 cut(s)	410, 1244, 1310
StuI	AGGCCT	1 cut(s)	813
StyD4I	CCNGG	1 cut(s)	802
StyI	CCWWGG	4 cut(s)	188, 570, 740, 1225
TaaI	ACNGT	3 cut(s)	619, 697, 973
TaqI	TCGA	5 cut(s)	93, 101, 267, 386, 554
TaqII	GACCGA	1 cut(s)	1008
TatI	WGTACW	4 cut(s)	57, 692, 702, 1281
TauI	GCSGC	1 cut(s)	590
TfiI	GAWTC	4 cut(s)	95, 477, 1257, 1483
Tru1I	TTAA	2 cut(s)	1020, 1140
Tru9I	TTAA	2 cut(s)	1020, 1140
TscAI	CASTG	6 cut(s)	43, 207, 487, 702, 722, 1443
TseFI	GTSAC	2 cut(s)	202, 1155
Tsp45I	GTSAC	2 cut(s)	202, 1155
TspDTI	ATGAA	3 cut(s)	333, 524, 785
TspGWI	ACGGA	1 cut(s)	1550
TspRI	CASTG	6 cut(s)	43, 207, 487, 702, 722, 1443
Tth111I	GACNNNGTC	1 cut(s)	995
Vha464I	CTTAAG	1 cut(s)	1019
VpaK11BI	GGWCC	3 cut(s)	123, 323, 521
XagI	CCTNNNNNAGG	1 cut(s)	68
XapI	RAATTY	7 cut(s)	287, 503, 530, 593, 869, 983, 1233
XcmI	CCANNNNNNNNNTGG	1 cut(s)	916
XhoI	CTCGAG	1 cut(s)	100
XmiI	GTMKAC	2 cut(s)	168, 450
XmnI	GAANNNNTTC	2 cut(s)	213, 531
XspI	CTAG	3 cut(s)	410, 1244, 1310
Zsp2I	ATGCAT	2 cut(s)	1223, 1430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.