RchiOBHm_Chr6g0280281

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
43599282 .. 43603043
3762 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25133

Sequence Viewer

Length: 1470 bp
ATGGAGAAGCAGGTAGCCGTTGTGGGAGCAGGGATCAGTGGCCTTCTTGCCTGCAACACTATTGGAGGCGTATGGACCAAGACTATCGAGACTACAAAGCTCCAATCCCCTAAAGCATTCTACCAATTCTCGGATTTTCCATGGCCATCTTCAGTAACAGAGGACCATCCTAATCAGAATCAGGTATTAGAATATGTCCAATCTTATGCTCGCCATTTCGACTTGATCAGGCACATCAAATTCAATACCAAAGTGTGTGGTATAGAGTATGAAGGTCCATCTCAGGATAAGATGCAATCTTGGAGTCTCTGGGGTGGCACTGGGGAGCCCTTCAGCTCGGAAAGGAAATGGAAAGTTATAGTAGAAGAGAAGCAAAGCCTTTCCACTGAGACTTATTTGGTAGACTTTGTGATCCTCTGCATCGGGCGATTCAGCGATGTTCCAAACATTCCTGAATTCACTCCGAACAAGGGACCGGAAGCATTCCATGGAAAGGTTATACACTCGATGGAATATGCTAACATGGATTACGAAAGCGCTGCTAAATTCGTGACAGGAAAGCAAGTAACAGTTGTTGGGTCTCAGAAATTTGCACTGGACATTGCAATGGAATGTTCAAATGCTAATGGGATAGAAAATCCATGCACATTGTTGTACAGACAAGAACACTGGAATATTCCAGACCTATTTCCATGGGGTGTGCCTCTTGCATTTCTCTACTTCAATCGCTTCTCCGAGCTCTTGGTTCATAAGCCAGGCGAAGGCTTCCTGCTTAGTCTCCTTGCAACACTGCTTTCACCACTGAGATGGGAGTTTTCAAAATTTGTGGAAACAGATGCAAATAACAAGCTAGGATTATACAAGTATGGGATGGTACCTAAGCATACATTCCTTCAAGATATTAGTTCTTGTGTGATAGCTATAGTGCCTGAAAAGTTTTATGACCGAGTGCAAGAGGGAAGCATTATACTCAAGAAATCTCCGAGCTACTTCGGATTTTGCAAAGAAGGAATTTGGTTGAAGGGGAAGTATTTCTCGCCTCTGAAGACGGATTTGGTCATATTGGCTACAAGGTTTAGAGGTGAGAAGAAGCTCAAAGACATCTTTGTATCTCCTACATTTCAGGACTACATGATGGGACCGCCAGAGGCAATACTGCCCCTCTACAGGCATTGCATAAATGGACGAATTCCACAGCTAGCTGTAATTGGATTCTCCGAGAGTATCTCAAACTTGTACACCTCCGAGGTGAGATGCAAATGGGTAACCGAGCTTCTTGGAGGCACGTTTAAGGTACCAAGCATAAAAGAAATGGAAAAGGATGTGAAGAAATGGGACGAATATGCGAAGCGATATGGTGGAGAATACTACCGGAGATCATGCATAAATGCCCTTCATGTATGGTACAATGACCAATTGTGCAAGGACATGGGATGGAACCCCAAGGAGGAAGAAGGGACTTCTTGCTGA

Protein Analysis

489

Amino Acids

55.89

Weight (kDa)

6.8

Isoelectric Point (pI)

50.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 36 - 481 4.1e-28 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 874, 1294
AccB1I GGYRCC 2 cut(s) 874, 1294
AccI GTMKAC 1 cut(s) 402
AciI CCGC 1 cut(s) 1142
AclWI GGATC 2 cut(s) 41, 406
AcoI YGGCCR 1 cut(s) 143
AcsI RAATTY 7 cut(s) 239, 455, 545, 587, 821, 1011, 1188
AcuI CTGAAG 3 cut(s) 135, 316, 1064
AfaI GTAC 5 cut(s) 656, 876, 1238, 1296, 1406
AfeI AGCGCT 1 cut(s) 538
AfiI CCNNNNNNNGG 6 cut(s) 130, 470, 493, 761, 1167, 1447
AgsI TTSAA 6 cut(s) 244, 618, 724, 819, 896, 1021
AjnI CCWGG 1 cut(s) 754
AjuI GAANNNNNNNTTGG 2 cut(s) 1037, 1069
Alw21I GWGCWC 1 cut(s) 741
Alw26I GTCTC 5 cut(s) 83, 311, 383, 585, 782
AlwI GGATC 2 cut(s) 41, 406
Aor51HI AGCGCT 1 cut(s) 538
AoxI GGCC 2 cut(s) 40, 143
ApeKI GCWGC 1 cut(s) 539
ApoI RAATTY 7 cut(s) 239, 455, 545, 587, 821, 1011, 1188
Asp700I GAANNNNTTC 1 cut(s) 1031
Asp718I GGTACC 2 cut(s) 874, 1294
AspLEI GCGC 1 cut(s) 539
AspS9I GGNCC 5 cut(s) 75, 163, 275, 473, 1139
AsuHPI GGTGA 3 cut(s) 789, 1094, 1261
AsuNHI GCTAGC 1 cut(s) 1198
AvaII GGWCC 5 cut(s) 75, 163, 275, 473, 1139
BalI TGGCCA 1 cut(s) 145
BanI GGYRCC 2 cut(s) 874, 1294
BanII GRGCYC 2 cut(s) 330, 741
BarI GAAGNNNNNNTAC 2 cut(s) 1257, 1289
BbsI GAAGAC 1 cut(s) 1052
Bbv12I GWGCWC 1 cut(s) 741
BbvI GCAGC 1 cut(s) 526
BccI CCATC 8 cut(s) 154, 174, 286, 502, 801, 865, 1129, 1428
BceAI ACGGC 1 cut(s) 2
BcgI CGANNNNNNTGC 2 cut(s) 521, 555
BciT130I CCWGG 1 cut(s) 756
BclI TGATCA 1 cut(s) 225
BcoDI GTCTC 5 cut(s) 83, 311, 383, 585, 782
BfaI CTAG 2 cut(s) 851, 1199
BfmI CTRYAG 2 cut(s) 921, 1165
BfoI RGCGCY 1 cut(s) 540
BisI GCNGC 1 cut(s) 540
BlsI GCNGC 1 cut(s) 541
Bme1390I CCNGG 1 cut(s) 756
Bme18I GGWCC 5 cut(s) 75, 163, 275, 473, 1139
BmgT120I GGNCC 5 cut(s) 75, 163, 275, 473, 1139
BmiI GGNNCC 6 cut(s) 327, 474, 876, 1140, 1296, 1439
BmrFI CCNGG 1 cut(s) 756
BmrI ACTGGG 1 cut(s) 330
BmsI GCATC 4 cut(s) 282, 429, 826, 1244
BmtI GCTAGC 1 cut(s) 1202
BmuI ACTGGG 1 cut(s) 330
BpiI GAAGAC 1 cut(s) 1052
BplI GAGNNNNNCTC 2 cut(s) 1211, 1243
Bpu10I CCTNAGC 1 cut(s) 879
BpuEI CTTGAG 1 cut(s) 956
BsaI GGTCTC 1 cut(s) 585
BsaJI CCNNGG 5 cut(s) 140, 487, 692, 1245, 1443
BsaWI WCCGGW 2 cut(s) 475, 1371
Bsc4I CCNNNNNNNGG 6 cut(s) 130, 470, 493, 761, 1167, 1447
Bse1I ACTGG 3 cut(s) 325, 600, 674
Bse3DI GCAATG 3 cut(s) 600, 612, 1171
BseBI CCWGG 1 cut(s) 756
BseDI CCNNGG 5 cut(s) 140, 487, 692, 1245, 1443
BseGI GGATG 4 cut(s) 166, 876, 1327, 1439
BseLI CCNNNNNNNGG 6 cut(s) 130, 470, 493, 761, 1167, 1447
BseMI GCAATG 3 cut(s) 600, 612, 1171
BseMII CTCAG 4 cut(s) 296, 378, 596, 794
BseNI ACTGG 3 cut(s) 325, 600, 674
BseXI GCAGC 1 cut(s) 526
BshFI GGCC 2 cut(s) 42, 145
BshNI GGYRCC 2 cut(s) 874, 1294
BsiHKAI GWGCWC 1 cut(s) 741
BsiSI CCGG 2 cut(s) 476, 1372
BslFI GGGAC 3 cut(s) 486, 1152, 1349
BslI CCNNNNNNNGG 6 cut(s) 130, 470, 493, 761, 1167, 1447
BsmAI GTCTC 5 cut(s) 83, 311, 383, 585, 782
BsmFI GGGAC 3 cut(s) 486, 1152, 1349
BsmI GAATGC 2 cut(s) 116, 482
BsnI GGCC 2 cut(s) 42, 145
Bso31I GGTCTC 1 cut(s) 585
Bsp1286I GDGCHC 2 cut(s) 330, 741
Bsp1407I TGTACA 2 cut(s) 654, 1236
Bsp143I GATC 4 cut(s) 33, 225, 411, 1376
Bsp19I CCATGG 3 cut(s) 140, 487, 692
BspACI CCGC 1 cut(s) 1142
BspANI GGCC 2 cut(s) 42, 145
BspCNI CTCAG 4 cut(s) 295, 379, 595, 795
BspLI GGNNCC 6 cut(s) 327, 474, 876, 1140, 1296, 1439
BspOI GCTAGC 1 cut(s) 1202
BspPI GGATC 2 cut(s) 41, 406
BspT107I GGYRCC 2 cut(s) 874, 1294
BspTNI GGTCTC 1 cut(s) 585
BsrDI GCAATG 3 cut(s) 600, 612, 1171
BsrGI TGTACA 2 cut(s) 654, 1236
BsrI ACTGG 3 cut(s) 325, 600, 674
BssECI CCNNGG 5 cut(s) 140, 487, 692, 1245, 1443
BssMI GATC 4 cut(s) 33, 225, 411, 1376
BssT1I CCWWGG 4 cut(s) 140, 487, 692, 1443
Bst2UI CCWGG 1 cut(s) 756
Bst4CI ACNGT 1 cut(s) 571
Bst6I CTCTTC 1 cut(s) 360
BstAUI TGTACA 2 cut(s) 654, 1236
BstC8I GCNNGC 3 cut(s) 52, 211, 1200
BstDEI CTNAG 6 cut(s) 282, 387, 582, 773, 803, 879
BstDSI CCRYGG 3 cut(s) 140, 487, 692
BstEII GGTNACC 1 cut(s) 1264
BstF5I GGATG 4 cut(s) 166, 876, 1327, 1439
BstH2I RGCGCY 1 cut(s) 540
BstHHI GCGC 1 cut(s) 539
BstKTI GATC 4 cut(s) 36, 228, 414, 1379
BstMAI GTCTC 5 cut(s) 83, 311, 383, 585, 782
BstMBI GATC 4 cut(s) 33, 225, 411, 1376
BstNI CCWGG 1 cut(s) 756
BstPI GGTNACC 1 cut(s) 1264
BstSCI CCNGG 1 cut(s) 754
BstSFI CTRYAG 2 cut(s) 921, 1165
BstV1I GCAGC 1 cut(s) 526
BstV2I GAAGAC 1 cut(s) 1052
BstXI CCANNNNNNTGG 1 cut(s) 807
BsuRI GGCC 2 cut(s) 42, 145
BtgI CCRYGG 3 cut(s) 140, 487, 692
BtgZI GCGATG 1 cut(s) 450
BtsCI GGATG 4 cut(s) 166, 876, 1327, 1439
BtsI GCAGTG 1 cut(s) 788
BtsIMutI CAGTG 7 cut(s) 43, 318, 384, 593, 667, 788, 800
Cac8I GCNNGC 3 cut(s) 52, 211, 1200
CfoI GCGC 1 cut(s) 539
Cfr13I GGNCC 5 cut(s) 75, 163, 275, 473, 1139
Csp6I GTAC 5 cut(s) 655, 875, 1237, 1295, 1405
CspCI CAANNNNNGTGG 4 cut(s) 238, 273, 807, 842
CviAII CATG 9 cut(s) 141, 488, 523, 642, 693, 1132, 1380, 1397, 1429
CviQI GTAC 5 cut(s) 655, 875, 1237, 1295, 1405
DdeI CTNAG 6 cut(s) 282, 387, 582, 773, 803, 879
DpnI GATC 4 cut(s) 35, 227, 413, 1378
DpnII GATC 4 cut(s) 33, 225, 411, 1376
EaeI YGGCCR 1 cut(s) 143
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
Ecl136II GAGCTC 1 cut(s) 739
Eco130I CCWWGG 4 cut(s) 140, 487, 692, 1443
Eco24I GRGCYC 2 cut(s) 330, 741
Eco31I GGTCTC 1 cut(s) 585
Eco47I GGWCC 5 cut(s) 75, 163, 275, 473, 1139
Eco47III AGCGCT 1 cut(s) 538
Eco53kI GAGCTC 1 cut(s) 739
Eco57I CTGAAG 3 cut(s) 135, 316, 1064
Eco91I GGTNACC 1 cut(s) 1264
EcoICRI GAGCTC 1 cut(s) 739
EcoO65I GGTNACC 1 cut(s) 1264
EcoRI GAATTC 2 cut(s) 455, 1188
EcoRII CCWGG 1 cut(s) 754
EcoT14I CCWWGG 4 cut(s) 140, 487, 692, 1443
EcoT22I ATGCAT 1 cut(s) 1385
EcoT38I GRGCYC 2 cut(s) 330, 741
ErhI CCWWGG 4 cut(s) 140, 487, 692, 1443
FaeI CATG 9 cut(s) 144, 491, 526, 645, 696, 1135, 1383, 1400, 1432
FaqI GGGAC 3 cut(s) 486, 1152, 1349
FatI CATG 9 cut(s) 140, 487, 522, 641, 692, 1131, 1379, 1396, 1428
FbaI TGATCA 1 cut(s) 225
FblI GTMKAC 1 cut(s) 402
Fnu4HI GCNGC 1 cut(s) 540
FokI GGATG 4 cut(s) 153, 883, 1334, 1446
FriOI GRGCYC 2 cut(s) 330, 741
Fsp4HI GCNGC 1 cut(s) 540
FspBI CTAG 2 cut(s) 851, 1199
GlaI GCGC 1 cut(s) 538
GluI GCNGC 1 cut(s) 540
HaeII RGCGCY 1 cut(s) 540
HaeIII GGCC 2 cut(s) 42, 145
HapII CCGG 2 cut(s) 476, 1372
HhaI GCGC 1 cut(s) 539
Hin1II CATG 9 cut(s) 144, 491, 526, 645, 696, 1135, 1383, 1400, 1432
Hin6I GCGC 1 cut(s) 537
HinP1I GCGC 1 cut(s) 537
HinfI GANTC 4 cut(s) 178, 304, 429, 1212
HpaII CCGG 2 cut(s) 476, 1372
HphI GGTGA 3 cut(s) 789, 1094, 1261
Hpy166II GTNNAC 2 cut(s) 403, 1239
Hpy188III TCNNGA 8 cut(s) 88, 284, 452, 550, 680, 896, 973, 1124
Hpy8I GTNNAC 2 cut(s) 403, 1239
HpyAV CCTTC 9 cut(s) 53, 266, 340, 755, 902, 1001, 1015, 1403, 1448
HpyCH4III ACNGT 1 cut(s) 571
HpyCH4IV ACGT 1 cut(s) 1286
HpyF3I CTNAG 6 cut(s) 282, 387, 582, 773, 803, 879
HpySE526I ACGT 1 cut(s) 1286
Hsp92II CATG 9 cut(s) 144, 491, 526, 645, 696, 1135, 1383, 1400, 1432
HspAI GCGC 1 cut(s) 537
KpnI GGTACC 2 cut(s) 878, 1298
Ksp22I TGATCA 1 cut(s) 225
Kzo9I GATC 4 cut(s) 33, 225, 411, 1376
LmnI GCTCC 3 cut(s) 26, 105, 325
Lsp1109I GCAGC 1 cut(s) 526
LweI GCATC 4 cut(s) 282, 429, 826, 1244
MaeI CTAG 2 cut(s) 851, 1199
MaeII ACGT 1 cut(s) 1286
MaeIII GTNAC 4 cut(s) 154, 550, 565, 1264
MalI GATC 4 cut(s) 35, 227, 413, 1378
MboI GATC 4 cut(s) 33, 225, 411, 1376
MboII GAAGA 6 cut(s) 141, 377, 1057, 1099, 1339, 1463
MfeI CAATTG 1 cut(s) 1415
MhlI GDGCHC 2 cut(s) 330, 741
MlsI TGGCCA 1 cut(s) 145
MluNI TGGCCA 1 cut(s) 145
MlyI GAGTC 1 cut(s) 313
Mox20I TGGCCA 1 cut(s) 145
Mph1103I ATGCAT 1 cut(s) 1385
MroXI GAANNNNTTC 1 cut(s) 1031
MscI TGGCCA 1 cut(s) 145
MseI TTAA 1 cut(s) 1290
MslI CAYNNNNRTG 2 cut(s) 605, 805
Msp20I TGGCCA 1 cut(s) 145
MspI CCGG 2 cut(s) 476, 1372
MspR9I CCNGG 1 cut(s) 756
MunI CAATTG 1 cut(s) 1415
Mva1269I GAATGC 2 cut(s) 116, 482
MvaI CCWGG 1 cut(s) 756
NcoI CCATGG 3 cut(s) 140, 487, 692
NdeII GATC 4 cut(s) 33, 225, 411, 1376
NheI GCTAGC 1 cut(s) 1198
NlaIII CATG 9 cut(s) 144, 491, 526, 645, 696, 1135, 1383, 1400, 1432
NlaIV GGNNCC 6 cut(s) 327, 474, 876, 1140, 1296, 1439
NmuCI GTSAC 1 cut(s) 550
NsiI ATGCAT 1 cut(s) 1385
PctI GAATGC 2 cut(s) 116, 482
PdmI GAANNNNTTC 1 cut(s) 1031
PfeI GAWTC 3 cut(s) 178, 429, 1212
PkrI GCNGC 1 cut(s) 541
PleI GAGTC 1 cut(s) 312
PpsI GAGTC 1 cut(s) 312
Psp124BI GAGCTC 1 cut(s) 741
Psp6I CCWGG 1 cut(s) 754
PspEI GGTNACC 1 cut(s) 1264
PspGI CCWGG 1 cut(s) 754
PspN4I GGNNCC 6 cut(s) 327, 474, 876, 1140, 1296, 1439
PspPI GGNCC 5 cut(s) 75, 163, 275, 473, 1139
RsaI GTAC 5 cut(s) 656, 876, 1238, 1296, 1406
RsaNI GTAC 5 cut(s) 655, 875, 1237, 1295, 1405
RseI CAYNNNNRTG 2 cut(s) 605, 805
SacI GAGCTC 1 cut(s) 741
SaqAI TTAA 1 cut(s) 1290
SatI GCNGC 1 cut(s) 540
Sau3AI GATC 4 cut(s) 33, 225, 411, 1376
Sau96I GGNCC 5 cut(s) 75, 163, 275, 473, 1139
SchI GAGTC 1 cut(s) 313
ScrFI CCNGG 1 cut(s) 756
SduI GDGCHC 2 cut(s) 330, 741
SfaNI GCATC 4 cut(s) 282, 429, 826, 1244
SfcI CTRYAG 2 cut(s) 921, 1165
SinI GGWCC 5 cut(s) 75, 163, 275, 473, 1139
SmiMI CAYNNNNRTG 2 cut(s) 605, 805
SmlI CTYRAG 1 cut(s) 971
SmoI CTYRAG 1 cut(s) 971
SsiI CCGC 1 cut(s) 1142
SspI AATATT 1 cut(s) 676
SspMI CTAG 2 cut(s) 851, 1199
SstI GAGCTC 1 cut(s) 741
StyD4I CCNGG 1 cut(s) 754
StyI CCWWGG 4 cut(s) 140, 487, 692, 1443
TaaI ACNGT 1 cut(s) 571
TaiI ACGT 1 cut(s) 1289
TaqI TCGA 3 cut(s) 87, 219, 506
TaqII GACCGA 1 cut(s) 960
TatI WGTACW 2 cut(s) 654, 1236
TfiI GAWTC 3 cut(s) 178, 429, 1212
Tru1I TTAA 1 cut(s) 1290
Tru9I TTAA 1 cut(s) 1290
TscAI CASTG 7 cut(s) 43, 325, 391, 600, 674, 795, 807
TseFI GTSAC 1 cut(s) 550
TseI GCWGC 1 cut(s) 539
Tsp45I GTSAC 1 cut(s) 550
TspDTI ATGAA 3 cut(s) 285, 737, 1385
TspGWI ACGGA 1 cut(s) 1064
TspRI CASTG 7 cut(s) 43, 325, 391, 600, 674, 795, 807
VpaK11BI GGWCC 5 cut(s) 75, 163, 275, 473, 1139
XapI RAATTY 7 cut(s) 239, 455, 545, 587, 821, 1011, 1188
XmiI GTMKAC 1 cut(s) 402
XmnI GAANNNNTTC 1 cut(s) 1031
XspI CTAG 2 cut(s) 851, 1199
Zsp2I ATGCAT 1 cut(s) 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.