Rorug06G0130900

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
18237992 .. 18238237
246 bp
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UTR
Exon/CDS
Intron
Rorug06G0130900.1

Sequence Viewer

Length: 246 bp
ATGCCTCCGGTGAACTCTAACGTCTTTTACTTCCCTCAAGGCCACGCCGAGCACACCCAAACCCACATTGATTTCTCCACCTTTGTCAGAATCCCAGCTCTCATTTTCTATCGGGGTCATCGGAATCAGATACATGGTCGACCTGGAAACAGACAAGGTCTCGCCAAAATCCGGTCCTTTCCAAGAGCAACGAGCCTTTTGCTTAGGACGAAGGTTCTGTGGACTTTGATGGGTCTGACAATTTGA

Protein Analysis

81

Amino Acids

9.33

Weight (kDa)

11.79

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 139
AfiI CCNNNNNNNGG 1 cut(s) 171
AjnI CCWGG 1 cut(s) 142
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
Alw21I GWGCWC 1 cut(s) 54
Alw26I GTCTC 1 cut(s) 164
AoxI GGCC 1 cut(s) 40
AspS9I GGNCC 1 cut(s) 174
AsuHPI GGTGA 1 cut(s) 22
AvaII GGWCC 1 cut(s) 174
Bbv12I GWGCWC 1 cut(s) 54
BccI CCATC 1 cut(s) 223
BcgI CGANNNNNNTGC 2 cut(s) 181, 215
BciT130I CCWGG 1 cut(s) 144
BcoDI GTCTC 1 cut(s) 164
Bme1390I CCNGG 1 cut(s) 144
Bme18I GGWCC 1 cut(s) 174
BmgT120I GGNCC 1 cut(s) 174
BmrFI CCNGG 1 cut(s) 144
Bpu10I CCTNAGC 1 cut(s) 203
BpuEI CTTGAG 1 cut(s) 21
BsaI GGTCTC 1 cut(s) 164
BsaWI WCCGGW 2 cut(s) 7, 171
Bsc4I CCNNNNNNNGG 1 cut(s) 171
BseBI CCWGG 1 cut(s) 144
BseLI CCNNNNNNNGG 1 cut(s) 171
BseYI CCCAGC 1 cut(s) 94
BshFI GGCC 1 cut(s) 42
BsiHKAI GWGCWC 1 cut(s) 54
BsiSI CCGG 2 cut(s) 8, 172
BslI CCNNNNNNNGG 1 cut(s) 171
BsmAI GTCTC 1 cut(s) 164
BsnI GGCC 1 cut(s) 42
Bso31I GGTCTC 1 cut(s) 164
Bsp1286I GDGCHC 1 cut(s) 54
BspANI GGCC 1 cut(s) 42
BspTNI GGTCTC 1 cut(s) 164
Bst2UI CCWGG 1 cut(s) 144
BstDEI CTNAG 1 cut(s) 203
BstMAI GTCTC 1 cut(s) 164
BstNI CCWGG 1 cut(s) 144
BstSCI CCNGG 1 cut(s) 142
BsuRI GGCC 1 cut(s) 42
Cfr13I GGNCC 1 cut(s) 174
CviAII CATG 1 cut(s) 134
CviJI RGCY 3 cut(s) 42, 98, 195
CviKI_1 RGCY 3 cut(s) 42, 98, 195
DdeI CTNAG 1 cut(s) 203
Eco31I GGTCTC 1 cut(s) 164
Eco47I GGWCC 1 cut(s) 174
EcoRII CCWGG 1 cut(s) 142
FaeI CATG 1 cut(s) 137
FaiI YATR 1 cut(s) 135
FatI CATG 1 cut(s) 133
FblI GTMKAC 1 cut(s) 139
GsaI CCCAGC 1 cut(s) 98
HaeIII GGCC 1 cut(s) 42
HapII CCGG 2 cut(s) 8, 172
Hin1II CATG 1 cut(s) 137
HincII GTYRAC 1 cut(s) 140
HindII GTYRAC 1 cut(s) 140
HinfI GANTC 2 cut(s) 90, 124
HpaII CCGG 2 cut(s) 8, 172
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 3 cut(s) 13, 140, 222
Hpy188I TCNGA 4 cut(s) 89, 123, 129, 237
Hpy8I GTNNAC 3 cut(s) 13, 140, 222
HpyAV CCTTC 1 cut(s) 205
HpyCH4IV ACGT 1 cut(s) 21
HpyF3I CTNAG 1 cut(s) 203
HpySE526I ACGT 1 cut(s) 21
Hsp92II CATG 1 cut(s) 137
LpnPI CCDG 5 cut(s) 21, 108, 129, 156, 185
MaeII ACGT 1 cut(s) 21
MhlI GDGCHC 1 cut(s) 54
MluCI AATT 1 cut(s) 240
MnlI CCTC 2 cut(s) 15, 45
MspI CCGG 2 cut(s) 8, 172
MspR9I CCNGG 1 cut(s) 144
MvaI CCWGG 1 cut(s) 144
NlaIII CATG 1 cut(s) 137
NmeAIII GCCGAG 1 cut(s) 73
PfeI GAWTC 2 cut(s) 90, 124
PflFI GACNNNGTC 1 cut(s) 156
Psp6I CCWGG 1 cut(s) 142
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 1 cut(s) 142
PspPI GGNCC 1 cut(s) 174
PsyI GACNNNGTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 138
Sau96I GGNCC 1 cut(s) 174
ScrFI CCNGG 1 cut(s) 144
SduI GDGCHC 1 cut(s) 54
SetI ASST 6 cut(s) 24, 83, 100, 145, 160, 216
SinI GGWCC 1 cut(s) 174
SmlI CTYRAG 1 cut(s) 36
SmoI CTYRAG 1 cut(s) 36
Sse9I AATT 1 cut(s) 240
StyD4I CCNGG 1 cut(s) 142
TaiI ACGT 1 cut(s) 24
TaqI TCGA 1 cut(s) 139
TasI AATT 1 cut(s) 240
TfiI GAWTC 2 cut(s) 90, 124
Tth111I GACNNNGTC 1 cut(s) 156
VpaK11BI GGWCC 1 cut(s) 174
XmiI GTMKAC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.