Rorug06G0131500

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
18542791 .. 18545146
2356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0131500.1

Sequence Viewer

Length: 1101 bp
ATGGAGGTAGAGCAGGTTCTTCACATGAATGGCGGAGATGGCAAAACAAGCTACGCAAACCACTCACTTCTTCAAAGAGCTGTGATTTCGACGGTGAAGCCCATAGTGGACGCAAGCATAGAGGAGCTCTGCAGCACTCTCTTCCCAGAGTGTCTGAAAATAGCAGACTTGGGATGCTCTTCGGGACCCAATACCCTTCTGGTGGTATCAGACATCATGGACAACATCCAGAACACGTTTCGGAAGCTGAACCTTCCCCCACCATCGCTTCAAGCATTCTTGAATGACCTTCCCAGGAACGATTTCAACACGGTGTTCAAGTCACTGCCTGGCTTCTATAAGAAGCTCGATGAAGAACCTGATAAAAAGTCGGGTCCTTGTTTCATTGCAGCAATGCCCGGTTCCTTTTATGGGAGGCTCTTTCCTAACAATTCTCTCCACTTTGTTCATTCTTCTTATGCTCTCATGTGGATCTCTGAGGTTCCAAAAGGTTTGGTAACAAAAGCAGGAGAGGGACTGAACAAGGGGAACATATACATAGCCAAGACAAGCTCACCTGCTGTGTTTAATGAATACTTTGAGCAATTCAAAAGGGACTTCACACTCTTTCTGAGATCTCGGGCACAAGAACTAGTCCCGGGAGGTAGTATGGTCCTCACAACCATGGGCAGCATAACGAGCAATGATCCCCTCTGCATTTGGGAATTCGTCGGATTGAAACTCAATGACATGGTTTTAGATGGTTTGATTAAGAAGCAAAAGTTGGACACATTCAATTTGCCATACTATGCACCCACAAGATATGAGGTAAAGGAGGTGATCGAGGCTGAAGGGTCTTTTACTTTGCAAAACCTTGAAGCTTTCAGAAATGACTGGGACTCTTACATAAAACAAGCTAACAATGACCTTGACAAGAAAGCAAGGGCTGCAATACTCTCCACTGACATAAGGGCTGTGGGAGAGCCTATTCTGGCCAGCCATTTCGGAGAGGAAGCAATGGATGAATTGTTCAGTAGGTTCGAAGAAAATGTTCTCGATCACATGGAAAGGGAGAAGTGCCAGTTCATTAACCTGGTTATCTCATTGACTAAGAAGTGTTGA

Protein Analysis

366

Amino Acids

41.11

Weight (kDa)

5.33

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 40 - 364 3.9e-123 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 565
Acc36I ACCTGC 2 cut(s) 4, 565
AciI CCGC 1 cut(s) 33
AclWI GGATC 2 cut(s) 479, 680
AcoI YGGCCR 1 cut(s) 972
AcsI RAATTY 1 cut(s) 704
AcuI CTGAAG 1 cut(s) 849
AfiI CCNNNNNNNGG 2 cut(s) 202, 411
AflIII ACRYGT 1 cut(s) 234
AgsI TTSAA 9 cut(s) 74, 272, 283, 307, 319, 589, 718, 775, 857
AhlI ACTAGT 1 cut(s) 631
AjnI CCWGG 3 cut(s) 293, 328, 1071
AjuI GAANNNNNNNTTGG 2 cut(s) 746, 778
AloI GAACNNNNNNTCC 2 cut(s) 992, 1024
AluBI AGCT 8 cut(s) 51, 80, 127, 247, 346, 552, 860, 896
AluI AGCT 8 cut(s) 51, 80, 127, 247, 346, 552, 860, 896
Alw21I GWGCWC 1 cut(s) 129
AlwI GGATC 2 cut(s) 479, 680
Ama87I CYCGRG 2 cut(s) 618, 637
AoxI GGCC 1 cut(s) 972
ApeKI GCWGC 4 cut(s) 132, 389, 669, 926
ApoI RAATTY 1 cut(s) 704
Asp700I GAANNNNTTC 2 cut(s) 302, 1029
AspS9I GGNCC 3 cut(s) 185, 374, 652
AsuC2I CCSGG 3 cut(s) 399, 638, 639
AsuHPI GGTGA 3 cut(s) 106, 546, 829
AsuII TTCGAA 1 cut(s) 1020
AvaI CYCGRG 2 cut(s) 618, 637
AvaII GGWCC 3 cut(s) 185, 374, 652
BaeGI GKGCMC 1 cut(s) 625
BalI TGGCCA 1 cut(s) 974
BanII GRGCYC 1 cut(s) 129
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 4 cut(s) 144, 401, 681, 913
BccI CCATC 3 cut(s) 32, 271, 734
BciT130I CCWGG 3 cut(s) 295, 330, 1073
BcnI CCSGG 3 cut(s) 399, 638, 639
BcuI ACTAGT 1 cut(s) 631
BfaI CTAG 1 cut(s) 632
BfmI CTRYAG 1 cut(s) 130
BfuAI ACCTGC 2 cut(s) 4, 565
BglII AGATCT 1 cut(s) 614
BisI GCNGC 4 cut(s) 133, 390, 670, 927
BlsI GCNGC 4 cut(s) 134, 391, 671, 928
Bme1390I CCNGG 6 cut(s) 295, 330, 399, 638, 639, 1073
Bme18I GGWCC 3 cut(s) 185, 374, 652
BmeT110I CYCGRG 2 cut(s) 618, 637
BmgT120I GGNCC 3 cut(s) 185, 374, 652
BmiI GGNNCC 5 cut(s) 186, 187, 375, 403, 483
BmrFI CCNGG 6 cut(s) 295, 330, 399, 638, 639, 1073
BmrI ACTGGG 1 cut(s) 883
BmsI GCATC 1 cut(s) 164
BmuI ACTGGG 1 cut(s) 883
Bpu14I TTCGAA 1 cut(s) 1020
BpuMI CCSGG 3 cut(s) 399, 638, 639
BsaJI CCNNGG 3 cut(s) 293, 637, 663
Bsc4I CCNNNNNNNGG 2 cut(s) 202, 411
Bse1I ACTGG 2 cut(s) 878, 1060
Bse3DI GCAATG 4 cut(s) 384, 399, 688, 1002
BseBI CCWGG 3 cut(s) 295, 330, 1073
BseDI CCNNGG 3 cut(s) 293, 637, 663
BseGI GGATG 3 cut(s) 179, 225, 1006
BseLI CCNNNNNNNGG 2 cut(s) 202, 411
BseMI GCAATG 4 cut(s) 384, 399, 688, 1002
BseMII CTCAG 2 cut(s) 468, 602
BseNI ACTGG 2 cut(s) 878, 1060
BseRI GAGGAG 1 cut(s) 137
BseSI GKGCMC 1 cut(s) 625
BseXI GCAGC 4 cut(s) 144, 401, 681, 913
BshFI GGCC 1 cut(s) 974
BsiHKAI GWGCWC 1 cut(s) 129
BsiHKCI CYCGRG 2 cut(s) 618, 637
BsiSI CCGG 2 cut(s) 399, 638
BslFI GGGAC 5 cut(s) 198, 528, 608, 620, 890
BslI CCNNNNNNNGG 2 cut(s) 202, 411
BsmFI GGGAC 5 cut(s) 198, 528, 608, 620, 890
BsmI GAATGC 1 cut(s) 275
BsnI GGCC 1 cut(s) 974
BsoBI CYCGRG 2 cut(s) 618, 637
Bsp119I TTCGAA 1 cut(s) 1020
Bsp1286I GDGCHC 2 cut(s) 129, 625
Bsp143I GATC 5 cut(s) 471, 614, 685, 819, 1036
Bsp19I CCATGG 1 cut(s) 663
BspACI CCGC 1 cut(s) 33
BspANI GGCC 1 cut(s) 974
BspCNI CTCAG 2 cut(s) 469, 603
BspLI GGNNCC 5 cut(s) 186, 187, 375, 403, 483
BspMAI CTGCAG 1 cut(s) 134
BspMI ACCTGC 2 cut(s) 4, 565
BspPI GGATC 2 cut(s) 479, 680
BspQI GCTCTTC 1 cut(s) 184
BspT104I TTCGAA 1 cut(s) 1020
BsrDI GCAATG 4 cut(s) 384, 399, 688, 1002
BsrI ACTGG 2 cut(s) 878, 1060
BssECI CCNNGG 3 cut(s) 293, 637, 663
BssMI GATC 5 cut(s) 471, 614, 685, 819, 1036
BssT1I CCWWGG 1 cut(s) 663
Bst2UI CCWGG 3 cut(s) 295, 330, 1073
Bst4CI ACNGT 2 cut(s) 94, 313
Bst6I CTCTTC 2 cut(s) 146, 184
BstAPI GCANNNNNTGC 1 cut(s) 926
BstBI TTCGAA 1 cut(s) 1020
BstC8I GCNNGC 2 cut(s) 115, 976
BstDEI CTNAG 3 cut(s) 477, 611, 1089
BstDSI CCRYGG 1 cut(s) 663
BstF5I GGATG 3 cut(s) 179, 225, 1006
BstKTI GATC 5 cut(s) 474, 617, 688, 822, 1039
BstMBI GATC 5 cut(s) 471, 614, 685, 819, 1036
BstMWI GCNNNNNNNGC 4 cut(s) 39, 48, 678, 926
BstNI CCWGG 3 cut(s) 295, 330, 1073
BstSCI CCNGG 6 cut(s) 293, 328, 397, 636, 637, 1071
BstSFI CTRYAG 1 cut(s) 130
BstSLI GKGCMC 1 cut(s) 625
BstV1I GCAGC 4 cut(s) 144, 401, 681, 913
BstX2I RGATCY 2 cut(s) 471, 614
BstYI RGATCY 2 cut(s) 471, 614
BsuRI GGCC 1 cut(s) 974
BtgI CCRYGG 1 cut(s) 663
BtgZI GCGATG 1 cut(s) 249
BtsCI GGATG 3 cut(s) 179, 225, 1006
BtsI GCAGTG 1 cut(s) 323
BtsIMutI CAGTG 2 cut(s) 323, 939
BveI ACCTGC 2 cut(s) 4, 565
Cac8I GCNNGC 2 cut(s) 115, 976
Cfr13I GGNCC 3 cut(s) 185, 374, 652
Cfr9I CCCGGG 1 cut(s) 637
CseI GACGC 1 cut(s) 119
CsiI ACCWGGT 1 cut(s) 1071
CviAII CATG 6 cut(s) 25, 217, 466, 664, 730, 1042
DdeI CTNAG 3 cut(s) 477, 611, 1089
DpnI GATC 5 cut(s) 473, 616, 687, 821, 1038
DpnII GATC 5 cut(s) 471, 614, 685, 819, 1036
EaeI YGGCCR 1 cut(s) 972
Eam1104I CTCTTC 2 cut(s) 146, 184
EarI CTCTTC 2 cut(s) 146, 184
EciI GGCGGA 1 cut(s) 48
Ecl136II GAGCTC 1 cut(s) 127
Eco130I CCWWGG 1 cut(s) 663
Eco24I GRGCYC 1 cut(s) 129
Eco47I GGWCC 3 cut(s) 185, 374, 652
Eco53kI GAGCTC 1 cut(s) 127
Eco57I CTGAAG 1 cut(s) 849
Eco88I CYCGRG 2 cut(s) 618, 637
EcoICRI GAGCTC 1 cut(s) 127
EcoO109I RGGNCCY 2 cut(s) 185, 374
EcoRI GAATTC 1 cut(s) 704
EcoRII CCWGG 3 cut(s) 293, 328, 1071
EcoT14I CCWWGG 1 cut(s) 663
EcoT38I GRGCYC 1 cut(s) 129
ErhI CCWWGG 1 cut(s) 663
FaeI CATG 6 cut(s) 28, 220, 469, 667, 733, 1045
FaqI GGGAC 5 cut(s) 198, 528, 608, 620, 890
FatI CATG 6 cut(s) 24, 216, 465, 663, 729, 1041
Fnu4HI GCNGC 4 cut(s) 133, 390, 670, 927
FokI GGATG 3 cut(s) 186, 212, 1013
FriOI GRGCYC 1 cut(s) 129
Fsp4HI GCNGC 4 cut(s) 133, 390, 670, 927
FspBI CTAG 1 cut(s) 632
GluI GCNGC 4 cut(s) 133, 390, 670, 927
HaeIII GGCC 1 cut(s) 974
HapII CCGG 2 cut(s) 399, 638
HgaI GACGC 1 cut(s) 119
Hin1II CATG 6 cut(s) 28, 220, 469, 667, 733, 1045
HindIII AAGCTT 1 cut(s) 858
HinfI GANTC 1 cut(s) 878
HpaII CCGG 2 cut(s) 399, 638
HphI GGTGA 3 cut(s) 106, 546, 829
Hpy166II GTNNAC 1 cut(s) 109
Hpy188I TCNGA 8 cut(s) 156, 211, 243, 478, 612, 713, 866, 986
Hpy188III TCNNGA 4 cut(s) 183, 229, 280, 1034
Hpy8I GTNNAC 1 cut(s) 109
Hpy99I CGWCG 2 cut(s) 94, 713
HpyAV CCTTC 4 cut(s) 206, 263, 299, 824
HpyCH4III ACNGT 2 cut(s) 94, 313
HpyCH4IV ACGT 1 cut(s) 236
HpyCH4V TGCA 6 cut(s) 132, 389, 696, 791, 847, 929
HpyF10VI GCNNNNNNNGC 4 cut(s) 39, 48, 678, 926
HpyF3I CTNAG 3 cut(s) 477, 611, 1089
HpySE526I ACGT 1 cut(s) 236
Hsp92II CATG 6 cut(s) 28, 220, 469, 667, 733, 1045
KflI GGGWCCC 1 cut(s) 185
Kzo9I GATC 5 cut(s) 471, 614, 685, 819, 1036
LguI GCTCTTC 1 cut(s) 184
LmnI GCTCC 1 cut(s) 124
Lsp1109I GCAGC 4 cut(s) 144, 401, 681, 913
LweI GCATC 1 cut(s) 164
MabI ACCWGGT 1 cut(s) 1071
MaeI CTAG 1 cut(s) 632
MaeII ACGT 1 cut(s) 236
MaeIII GTNAC 2 cut(s) 321, 496
MalI GATC 5 cut(s) 473, 616, 687, 821, 1038
MboI GATC 5 cut(s) 471, 614, 685, 819, 1036
MboII GAAGA 7 cut(s) 11, 62, 133, 171, 365, 444, 1034
MflI RGATCY 2 cut(s) 471, 614
MhlI GDGCHC 2 cut(s) 129, 625
MlsI TGGCCA 1 cut(s) 974
MluCI AATT 5 cut(s) 430, 584, 704, 775, 1004
MluNI TGGCCA 1 cut(s) 974
MlyI GAGTC 1 cut(s) 872
MmeI TCCRAC 2 cut(s) 691, 744
Mox20I TGGCCA 1 cut(s) 974
MroXI GAANNNNTTC 2 cut(s) 302, 1029
MscI TGGCCA 1 cut(s) 974
MseI TTAA 3 cut(s) 567, 750, 1068
MslI CAYNNNNRTG 2 cut(s) 27, 662
Msp20I TGGCCA 1 cut(s) 974
MspI CCGG 2 cut(s) 399, 638
MspR9I CCNGG 6 cut(s) 295, 330, 399, 638, 639, 1073
Mva1269I GAATGC 1 cut(s) 275
MvaI CCWGG 3 cut(s) 295, 330, 1073
MwoI GCNNNNNNNGC 4 cut(s) 39, 48, 678, 926
NciI CCSGG 3 cut(s) 399, 638, 639
NcoI CCATGG 1 cut(s) 663
NdeII GATC 5 cut(s) 471, 614, 685, 819, 1036
NlaIII CATG 6 cut(s) 28, 220, 469, 667, 733, 1045
NlaIV GGNNCC 5 cut(s) 186, 187, 375, 403, 483
NmuCI GTSAC 1 cut(s) 321
NspV TTCGAA 1 cut(s) 1020
PaqCI CACCTGC 1 cut(s) 565
PciSI GCTCTTC 1 cut(s) 184
PctI GAATGC 1 cut(s) 275
PdmI GAANNNNTTC 2 cut(s) 302, 1029
PkrI GCNGC 4 cut(s) 134, 391, 671, 928
PleI GAGTC 1 cut(s) 872
PpsI GAGTC 1 cut(s) 872
PpuMI RGGWCCY 2 cut(s) 185, 374
Psp124BI GAGCTC 1 cut(s) 129
Psp5II RGGWCCY 2 cut(s) 185, 374
Psp6I CCWGG 3 cut(s) 293, 328, 1071
PspGI CCWGG 3 cut(s) 293, 328, 1071
PspN4I GGNNCC 5 cut(s) 186, 187, 375, 403, 483
PspPI GGNCC 3 cut(s) 185, 374, 652
PspPPI RGGWCCY 2 cut(s) 185, 374
PsrI GAACNNNNNNTAC 1 cut(s) 32
PstI CTGCAG 1 cut(s) 134
PsuI RGATCY 2 cut(s) 471, 614
RseI CAYNNNNRTG 2 cut(s) 27, 662
SacI GAGCTC 1 cut(s) 129
SapI GCTCTTC 1 cut(s) 184
SaqAI TTAA 3 cut(s) 567, 750, 1068
SatI GCNGC 4 cut(s) 133, 390, 670, 927
Sau3AI GATC 5 cut(s) 471, 614, 685, 819, 1036
Sau96I GGNCC 3 cut(s) 185, 374, 652
SchI GAGTC 1 cut(s) 872
ScrFI CCNGG 6 cut(s) 295, 330, 399, 638, 639, 1073
SduI GDGCHC 2 cut(s) 129, 625
SexAI ACCWGGT 1 cut(s) 1071
SfaNI GCATC 1 cut(s) 164
SfcI CTRYAG 1 cut(s) 130
SfuI TTCGAA 1 cut(s) 1020
SinI GGWCC 3 cut(s) 185, 374, 652
SmaI CCCGGG 1 cut(s) 639
SmiMI CAYNNNNRTG 2 cut(s) 27, 662
SpeI ACTAGT 1 cut(s) 631
Sse9I AATT 5 cut(s) 430, 584, 704, 775, 1004
SsiI CCGC 1 cut(s) 33
SspMI CTAG 1 cut(s) 632
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 6 cut(s) 293, 328, 397, 636, 637, 1071
StyI CCWWGG 1 cut(s) 663
TaaI ACNGT 2 cut(s) 94, 313
TaiI ACGT 1 cut(s) 239
TaqI TCGA 5 cut(s) 89, 348, 822, 1020, 1035
TasI AATT 5 cut(s) 430, 584, 704, 775, 1004
Tru1I TTAA 3 cut(s) 567, 750, 1068
Tru9I TTAA 3 cut(s) 567, 750, 1068
TscAI CASTG 2 cut(s) 330, 946
TseFI GTSAC 1 cut(s) 321
TseI GCWGC 4 cut(s) 132, 389, 669, 926
Tsp45I GTSAC 1 cut(s) 321
TspDTI ATGAA 7 cut(s) 41, 366, 373, 437, 585, 1017, 1054
TspMI CCCGGG 1 cut(s) 637
TspRI CASTG 2 cut(s) 330, 946
VpaK11BI GGWCC 3 cut(s) 185, 374, 652
XapI RAATTY 1 cut(s) 704
XcmI CCANNNNNNNNNTGG 1 cut(s) 196
XmaI CCCGGG 1 cut(s) 637
XmnI GAANNNNTTC 2 cut(s) 302, 1029
XspI CTAG 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.