Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0000948

Physical Location & Seq

Genomic Coordinates Reverse (-)

42968538 .. 42971281

Gene Structure 2744 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG242200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGGGAAGAAGGTGGCCATAATAGGAGCTGGGATCAGTGGCCTTCTTGCCTGCAAGTACACCCTTTCAAAGGGCTTTCAACCCATCGTGTTCGAATCCTCGAGCACCATCGGAGGGGTATGGACCAAAACTATTAAGAGTACCAAGCTCCAAACTCCTAAAGCAGCCTACCAATTCTCAGATTTTCCATGGCCTTCTTCAGTGACAGAGGACTTTCCAAACCAGCATCAAGTTATGGATTACATCCAATCATACGCTCAACATTTCGACTTGCTCAGGCACATCAAATTCAATACCAAAGTGTGTGGTATAGAGTATGAAGGCCCATCTGAGTATGAGATGCAATCATCGAGTCTCTGGGGCGGCACCGGTGAGCCTTTCAGCTCGAAAGGGAAATGGAAAGTTATGGTAGAAGACAAACAAAGCCCTTCAACTGAGGTTTACTTGGTAGACTTTGTAGTCCTCTGCATTGGACGATTCAGTGGTATTCCAAACATTCCTAAATTTCATACGAACAAGGGTCCAGAAGAATTTCATGGTGATGTCATACACTCGATGGAATATGCTTCCAAGGATTATGAAAACGCTGCTGAATTTGTGAAAGGAAAGCAAGTAACAGTTGTTGGGTTTCAGAAATCTGCATTGGACATTGCAATGGAGTGCTCAAATGCAAATGGGGTAGAACATCCATGTACAGTGTTGTACAAGACAGAACACTGGAATGTTCCTGCCCGTGTGCCTCTCGAATACCTATACCTCAATCGCTTCTCGGAGCTTTTGGTTCATAAGCCTGGTGAAGGCCTCCTACTCAGTCTCCTTGCAACAATTCTTTCACCTCTGAGATGGGCATTTTCAAAATTTGTTGAAAGCTACATAGATAAGAAGCTTGGATTATCCAAGTATGGAATGGTACCTAAGCATAGTTTCCTTCAAGAAATCAGTTCCTGCCTGATCTCAACCGTGCCTGAAAAATTCTATGACCGAGTCCAAGAAGGAAGCATTTTACTTAAGAAATCTCCCAAAAGCTTCAGCTTTTGCCGAGAAGGCATTTTGGTTGAAGGAGAAAACTCCCCTGTAAAGACAGATTTGGTCATATTGGCTACTGGATTTAGAGGTGATGAGAAGCTTAAAGACATCTTTATGTCACCAACATTTCAAGACTACATAGCTGGATCACCTAAGTCCATTTTACCTCTCTACAGGGAATGCATCCATGGACGAATTCCACAACTAGCTGTAATTGGATTCTCCGTGAGTATCTCAACCTTGCACACATCAGAGATGAGGTGCAGATGGCTAGCAGAGCTTTTTGCAGGCACATTCAAGGTACCAAGCATAAAAGAAATGGAGAAAGATGTGAAACAATGGGATGAGTATGCCAAGCGATACTCTGGAAAATACTACCGGAGATCATGCATCGGAGCGCTTCACATTTGGTACAATGACCAATTGTGCAAGGATATGGGATGGAATCCCAAAAGGAAGAAGGGACTTCTTGCTGAACTATTTGAGCCTTATGGCCCAACGGATTATATTTCCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004497 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009626 GO:0009627 GO:0009628 GO:0009814 GO:0009870 GO:0009987 GO:0010204 GO:0012501 GO:0016491 GO:0023052 GO:0031347 GO:0031349 GO:0033554 GO:0034050 GO:0036293 GO:0036294 GO:0042221 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0065007 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0080134 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00982 ko01120 map00982 map01120

Pfam Domains

Protein Families

FMO-like

Protein Analysis

514

Amino Acids

58.11

Weight (kDa)

8.42

Isoelectric Point (pI)

47.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FMO-like	PF00743	3 - 493	2e-44	Flavin-binding monooxygenase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000948)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16430 FvH4_2g16450
malus_domestica	MD00G1083300.v1.1 MD00G1083500.v1.1 MD05G1133000.v1.1 MD16G1203500.v1.1 MD16G1203700.v1.1
prunus_persica	Prupe.8G177000_v2.0.a1 Prupe.8G177100_v2.0.a1
pyrus_communis	pycom05g13010 pycom05g13030 pycom05g13040
rosa_chinensis	RchiOBHm_Chr6g0280221 RchiOBHm_Chr6g0280281 RchiOBHm_Chr6g0280291 RchiOBHm_Chr6g0280311 RchiOBHm_Chr6g0280341
rosa_laevigata	RLG00000013067 RLG00000013073 RLG00000013075 RLG00000013076
rosa_multiflora	Rmu_sc0000757.1_g000002 Rmu_sc0001572.1_g000020 Rmu_sc0001572.1_g000034 Rmu_sc0002826.1_g000002 Rmu_sc0002858.1_g000010 Rmu_sc0002858.1_g000031 Rmu_sc0004211.1_g000005 Rmu_sc0010624.1_g000006
rosa_roxburghii	Rroxscaffold_7G00188150 Rroxscaffold_7G00188190 Rroxscaffold_7G00188220 Rroxscaffold_7G00188230 Rroxscaffold_7G00188240 Rroxscaffold_7G00188270 Rroxscaffold_7G00188290
rosa_rugosa	Rorug06G0130900 Rorug06G0131200 Rorug06G0131200 Rorug06G0131200 Rorug06G0131500
rosa_samantha	Rh6AG241200 Rh6AG241800 Rh6AG241900 Rh6AG242100 Rh6AG242200 Rh6AG242700 Rh6AG242900 Rh6BG244800 Rh6BG245400 Rh6BG245500 Rh6BG245700 Rh6CG246700 Rh6CG247000 Rh6DG237500 Rh6DG238000 Rh6DG238300 Rh6DG238600
rosa_wichuraiana	Rw5G027390 Rw6G021000 Rw6G021020 Rw6G021040 Rw6G021070 Rw6G021120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	458
Acc65I	GGTACC	2 cut(s)	910, 1327
AccB1I	GGYRCC	3 cut(s)	365, 910, 1327
AccI	GTMKAC	1 cut(s)	450
AciI	CCGC	1 cut(s)	363
AclWI	GGATC	2 cut(s)	41, 1180
AcoI	YGGCCR	1 cut(s)	15
AcsI	RAATTY	7 cut(s)	287, 503, 530, 593, 857, 971, 1221
AcuI	CTGAAG	2 cut(s)	183, 1012
AfaI	GTAC	7 cut(s)	59, 142, 694, 704, 912, 1329, 1439
AfeI	AGCGCT	1 cut(s)	1425
AfiI	CCNNNNNNNGG	3 cut(s)	70, 114, 797
AflII	CTTAAG	1 cut(s)	1007
AgeI	ACCGGT	1 cut(s)	368
AjnI	CCWGG	1 cut(s)	790
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
Alw21I	GWGCWC	2 cut(s)	107, 665
Alw26I	GTCTC	2 cut(s)	359, 818
AlwI	GGATC	2 cut(s)	41, 1180
AlwNI	CAGNNNCTG	1 cut(s)	945
Ama87I	CYCGRG	1 cut(s)	100
Aor51HI	AGCGCT	1 cut(s)	1425
AoxI	GGCC	6 cut(s)	15, 40, 191, 322, 799, 1519
ApeKI	GCWGC	2 cut(s)	164, 587
ApoI	RAATTY	7 cut(s)	287, 503, 530, 593, 857, 971, 1221
AsiGI	ACCGGT	1 cut(s)	368
Asp700I	GAANNNNTTC	1 cut(s)	531
Asp718I	GGTACC	2 cut(s)	910, 1327
AspLEI	GCGC	1 cut(s)	1426
AspS9I	GGNCC	4 cut(s)	123, 323, 521, 1520
AsuHPI	GGTGA	7 cut(s)	383, 551, 806, 825, 1127, 1137, 1167
AsuII	TTCGAA	1 cut(s)	93
AsuNHI	GCTAGC	1 cut(s)	1297
AvaI	CYCGRG	1 cut(s)	100
AvaII	GGWCC	2 cut(s)	123, 521
BalI	TGGCCA	1 cut(s)	17
BanI	GGYRCC	3 cut(s)	365, 910, 1327
BarI	GAAGNNNNNNTAC	2 cut(s)	789, 821
BbsI	GAAGAC	1 cut(s)	420
Bbv12I	GWGCWC	2 cut(s)	107, 665
BbvI	GCAGC	2 cut(s)	176, 574
BccI	CCATC	7 cut(s)	92, 116, 334, 550, 837, 1287, 1461
BciT130I	CCWGG	1 cut(s)	792
BcoDI	GTCTC	2 cut(s)	359, 818
BfaI	CTAG	2 cut(s)	1232, 1298
BfmI	CTRYAG	1 cut(s)	1198
BfoI	RGCGCY	1 cut(s)	1427
BfrI	CTTAAG	1 cut(s)	1007
BglI	GCCNNNNNGGC	1 cut(s)	1044
BisI	GCNGC	3 cut(s)	165, 364, 588
BlsI	GCNGC	3 cut(s)	166, 365, 589
Bme1390I	CCNGG	1 cut(s)	792
Bme18I	GGWCC	2 cut(s)	123, 521
BmeT110I	CYCGRG	1 cut(s)	100
BmgT120I	GGNCC	4 cut(s)	123, 323, 521, 1520
BmiI	GGNNCC	4 cut(s)	367, 522, 912, 1329
BmrFI	CCNGG	1 cut(s)	792
BmsI	GCATC	4 cut(s)	235, 330, 1218, 1425
BmtI	GCTAGC	1 cut(s)	1301
BpiI	GAAGAC	1 cut(s)	420
Bpu10I	CCTNAGC	2 cut(s)	275, 915
Bpu14I	TTCGAA	1 cut(s)	93
BsaJI	CCNNGG	3 cut(s)	188, 570, 1213
BsaWI	WCCGGW	2 cut(s)	368, 1404
BsaXI	ACNNNNNCTCC	2 cut(s)	798, 828
Bsc4I	CCNNNNNNNGG	3 cut(s)	70, 114, 797
Bse118I	RCCGGY	1 cut(s)	368
Bse1I	ACTGG	2 cut(s)	722, 1108
Bse3DI	GCAATG	2 cut(s)	648, 660
BseBI	CCWGG	1 cut(s)	792
BseDI	CCNNGG	3 cut(s)	188, 570, 1213
BseGI	GGATG	5 cut(s)	243, 685, 1209, 1375, 1472
BseLI	CCNNNNNNNGG	3 cut(s)	70, 114, 797
BseMI	GCAATG	2 cut(s)	648, 660
BseMII	CTCAG	6 cut(s)	192, 289, 321, 426, 823, 830
BseNI	ACTGG	2 cut(s)	722, 1108
BseXI	GCAGC	2 cut(s)	176, 574
BseYI	CCCAGC	1 cut(s)	29
BsgI	GTGCAG	1 cut(s)	1309
BshFI	GGCC	6 cut(s)	17, 42, 193, 324, 801, 1521
BshNI	GGYRCC	3 cut(s)	365, 910, 1327
BshTI	ACCGGT	1 cut(s)	368
BsiHKAI	GWGCWC	2 cut(s)	107, 665
BsiHKCI	CYCGRG	1 cut(s)	100
BsiSI	CCGG	2 cut(s)	369, 1405
BslFI	GGGAC	1 cut(s)	1503
BslI	CCNNNNNNNGG	3 cut(s)	70, 114, 797
BsmAI	GTCTC	2 cut(s)	359, 818
BsmFI	GGGAC	1 cut(s)	1503
BsmI	GAATGC	1 cut(s)	1211
BsnI	GGCC	6 cut(s)	17, 42, 193, 324, 801, 1521
BsoBI	CYCGRG	1 cut(s)	100
Bsp119I	TTCGAA	1 cut(s)	93
Bsp1286I	GDGCHC	2 cut(s)	107, 665
Bsp1407I	TGTACA	2 cut(s)	692, 702
Bsp143I	GATC	4 cut(s)	33, 951, 1172, 1409
Bsp19I	CCATGG	2 cut(s)	188, 1213
BspACI	CCGC	1 cut(s)	363
BspANI	GGCC	6 cut(s)	17, 42, 193, 324, 801, 1521
BspCNI	CTCAG	6 cut(s)	191, 288, 322, 427, 822, 831
BspLI	GGNNCC	4 cut(s)	367, 522, 912, 1329
BspOI	GCTAGC	1 cut(s)	1301
BspPI	GGATC	2 cut(s)	41, 1180
BspT104I	TTCGAA	1 cut(s)	93
BspT107I	GGYRCC	3 cut(s)	365, 910, 1327
BspTI	CTTAAG	1 cut(s)	1007
BsrDI	GCAATG	2 cut(s)	648, 660
BsrFI	RCCGGY	1 cut(s)	368
BsrGI	TGTACA	2 cut(s)	692, 702
BsrI	ACTGG	2 cut(s)	722, 1108
BssAI	RCCGGY	1 cut(s)	368
BssECI	CCNNGG	3 cut(s)	188, 570, 1213
BssMI	GATC	4 cut(s)	33, 951, 1172, 1409
BssT1I	CCWWGG	3 cut(s)	188, 570, 1213
Bst2UI	CCWGG	1 cut(s)	792
Bst4CI	ACNGT	3 cut(s)	619, 697, 961
BstAFI	CTTAAG	1 cut(s)	1007
BstAUI	TGTACA	2 cut(s)	692, 702
BstBI	TTCGAA	1 cut(s)	93
BstC8I	GCNNGC	3 cut(s)	52, 1299, 1315
BstDEI	CTNAG	8 cut(s)	178, 275, 330, 435, 809, 839, 915, 1179
BstDSI	CCRYGG	2 cut(s)	188, 1213
BstENI	CCTNNNNNAGG	2 cut(s)	68, 795
BstF5I	GGATG	5 cut(s)	243, 685, 1209, 1375, 1472
BstH2I	RGCGCY	1 cut(s)	1427
BstHHI	GCGC	1 cut(s)	1426
BstKTI	GATC	4 cut(s)	36, 954, 1175, 1412
BstMAI	GTCTC	2 cut(s)	359, 818
BstMBI	GATC	4 cut(s)	33, 951, 1172, 1409
BstMWI	GCNNNNNNNGC	2 cut(s)	1044, 1303
BstNI	CCWGG	1 cut(s)	792
BstSCI	CCNGG	1 cut(s)	790
BstSFI	CTRYAG	1 cut(s)	1198
BstV1I	GCAGC	2 cut(s)	176, 574
BstV2I	GAAGAC	1 cut(s)	420
BsuRI	GGCC	6 cut(s)	17, 42, 193, 324, 801, 1521
BtgI	CCRYGG	2 cut(s)	188, 1213
BtsCI	GGATG	5 cut(s)	243, 685, 1209, 1375, 1472
BtsIMutI	CAGTG	5 cut(s)	43, 207, 487, 702, 715
Cac8I	GCNNGC	3 cut(s)	52, 1299, 1315
CaiI	CAGNNNCTG	1 cut(s)	945
CfoI	GCGC	1 cut(s)	1426
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	4 cut(s)	123, 323, 521, 1520
Csp6I	GTAC	7 cut(s)	58, 141, 693, 703, 911, 1328, 1438
CspAI	ACCGGT	1 cut(s)	368
CspCI	CAANNNNNGTGG	2 cut(s)	286, 321
CviAII	CATG	5 cut(s)	189, 536, 690, 1214, 1413
CviQI	GTAC	7 cut(s)	58, 141, 693, 703, 911, 1328, 1438
DdeI	CTNAG	8 cut(s)	178, 275, 330, 435, 809, 839, 915, 1179
DpnI	GATC	4 cut(s)	35, 953, 1174, 1411
DpnII	GATC	4 cut(s)	33, 951, 1172, 1409
DrdI	GACNNNNNNGTC	1 cut(s)	458
DseDI	GACNNNNNNGTC	1 cut(s)	458
EaeI	YGGCCR	1 cut(s)	15
Eco130I	CCWWGG	3 cut(s)	188, 570, 1213
Eco147I	AGGCCT	1 cut(s)	801
Eco47I	GGWCC	2 cut(s)	123, 521
Eco47III	AGCGCT	1 cut(s)	1425
Eco57I	CTGAAG	2 cut(s)	183, 1012
Eco88I	CYCGRG	1 cut(s)	100
EcoNI	CCTNNNNNAGG	2 cut(s)	68, 795
EcoRI	GAATTC	1 cut(s)	1221
EcoRII	CCWGG	1 cut(s)	790
EcoT14I	CCWWGG	3 cut(s)	188, 570, 1213
EcoT22I	ATGCAT	2 cut(s)	1211, 1418
ErhI	CCWWGG	3 cut(s)	188, 570, 1213
FaeI	CATG	5 cut(s)	192, 539, 693, 1217, 1416
FaqI	GGGAC	1 cut(s)	1503
FatI	CATG	5 cut(s)	188, 535, 689, 1213, 1412
FblI	GTMKAC	1 cut(s)	450
Fnu4HI	GCNGC	3 cut(s)	165, 364, 588
FokI	GGATG	5 cut(s)	230, 672, 1196, 1382, 1479
Fsp4HI	GCNGC	3 cut(s)	165, 364, 588
FspBI	CTAG	2 cut(s)	1232, 1298
GlaI	GCGC	1 cut(s)	1425
GluI	GCNGC	3 cut(s)	165, 364, 588
GsaI	CCCAGC	1 cut(s)	33
HaeII	RGCGCY	1 cut(s)	1427
HaeIII	GGCC	6 cut(s)	17, 42, 193, 324, 801, 1521
HapII	CCGG	2 cut(s)	369, 1405
HhaI	GCGC	1 cut(s)	1426
Hin1II	CATG	5 cut(s)	192, 539, 693, 1217, 1416
Hin6I	GCGC	1 cut(s)	1424
HinP1I	GCGC	1 cut(s)	1424
HindIII	AAGCTT	3 cut(s)	884, 1024, 1124
HinfI	GANTC	6 cut(s)	95, 352, 477, 984, 1245, 1471
HpaII	CCGG	2 cut(s)	369, 1405
HphI	GGTGA	7 cut(s)	383, 551, 806, 825, 1127, 1137, 1167
Hpy166II	GTNNAC	3 cut(s)	60, 442, 451
Hpy188I	TCNGA	8 cut(s)	113, 181, 331, 633, 772, 840, 1279, 1421
Hpy188III	TCNNGA	5 cut(s)	524, 743, 932, 1157, 1392
Hpy8I	GTNNAC	3 cut(s)	60, 442, 451
HpyCH4III	ACNGT	3 cut(s)	619, 697, 961
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1044, 1303
HpyF3I	CTNAG	8 cut(s)	178, 275, 330, 435, 809, 839, 915, 1179
Hsp92II	CATG	5 cut(s)	192, 539, 693, 1217, 1416
HspAI	GCGC	1 cut(s)	1424
KpnI	GGTACC	2 cut(s)	914, 1331
Kzo9I	GATC	4 cut(s)	33, 951, 1172, 1409
LmnI	GCTCC	4 cut(s)	26, 153, 772, 1421
Lsp1109I	GCAGC	2 cut(s)	176, 574
LweI	GCATC	4 cut(s)	235, 330, 1218, 1425
MaeI	CTAG	2 cut(s)	1232, 1298
MaeIII	GTNAC	3 cut(s)	202, 613, 1143
MalI	GATC	4 cut(s)	35, 953, 1174, 1411
MboI	GATC	4 cut(s)	33, 951, 1172, 1409
MboII	GAAGA	5 cut(s)	19, 189, 425, 539, 1495
MfeI	CAATTG	1 cut(s)	1448
MhlI	GDGCHC	2 cut(s)	107, 665
MlsI	TGGCCA	1 cut(s)	17
MluNI	TGGCCA	1 cut(s)	17
MlyI	GAGTC	2 cut(s)	361, 993
Mox20I	TGGCCA	1 cut(s)	17
Mph1103I	ATGCAT	2 cut(s)	1211, 1418
MroXI	GAANNNNTTC	1 cut(s)	531
MscI	TGGCCA	1 cut(s)	17
MseI	TTAA	4 cut(s)	135, 1008, 1128, 1543
MslI	CAYNNNNRTG	4 cut(s)	540, 653, 720, 1139
Msp20I	TGGCCA	1 cut(s)	17
MspCI	CTTAAG	1 cut(s)	1007
MspI	CCGG	2 cut(s)	369, 1405
MspR9I	CCNGG	1 cut(s)	792
MunI	CAATTG	1 cut(s)	1448
Mva1269I	GAATGC	1 cut(s)	1211
MvaI	CCWGG	1 cut(s)	792
MwoI	GCNNNNNNNGC	2 cut(s)	1044, 1303
NcoI	CCATGG	2 cut(s)	188, 1213
NdeII	GATC	4 cut(s)	33, 951, 1172, 1409
NheI	GCTAGC	1 cut(s)	1297
NlaIII	CATG	5 cut(s)	192, 539, 693, 1217, 1416
NlaIV	GGNNCC	4 cut(s)	367, 522, 912, 1329
NmeAIII	GCCGAG	1 cut(s)	1064
NmuCI	GTSAC	2 cut(s)	202, 1143
NsiI	ATGCAT	2 cut(s)	1211, 1418
NspV	TTCGAA	1 cut(s)	93
PaeR7I	CTCGAG	1 cut(s)	100
PceI	AGGCCT	1 cut(s)	801
PctI	GAATGC	1 cut(s)	1211
PdmI	GAANNNNTTC	1 cut(s)	531
PfeI	GAWTC	4 cut(s)	95, 477, 1245, 1471
PflFI	GACNNNGTC	1 cut(s)	983
PinAI	ACCGGT	1 cut(s)	368
PkrI	GCNGC	3 cut(s)	166, 365, 589
PleI	GAGTC	2 cut(s)	360, 992
PpsI	GAGTC	2 cut(s)	360, 992
Psp6I	CCWGG	1 cut(s)	790
PspFI	CCCAGC	1 cut(s)	29
PspGI	CCWGG	1 cut(s)	790
PspN4I	GGNNCC	4 cut(s)	367, 522, 912, 1329
PspPI	GGNCC	4 cut(s)	123, 323, 521, 1520
PspXI	VCTCGAGB	1 cut(s)	100
PstNI	CAGNNNCTG	1 cut(s)	945
PsyI	GACNNNGTC	1 cut(s)	983
RsaI	GTAC	7 cut(s)	59, 142, 694, 704, 912, 1329, 1439
RsaNI	GTAC	7 cut(s)	58, 141, 693, 703, 911, 1328, 1438
RseI	CAYNNNNRTG	4 cut(s)	540, 653, 720, 1139
SaqAI	TTAA	4 cut(s)	135, 1008, 1128, 1543
SatI	GCNGC	3 cut(s)	165, 364, 588
Sau3AI	GATC	4 cut(s)	33, 951, 1172, 1409
Sau96I	GGNCC	4 cut(s)	123, 323, 521, 1520
SchI	GAGTC	2 cut(s)	361, 993
ScrFI	CCNGG	1 cut(s)	792
SduI	GDGCHC	2 cut(s)	107, 665
SfaNI	GCATC	4 cut(s)	235, 330, 1218, 1425
SfcI	CTRYAG	1 cut(s)	1198
Sfr274I	CTCGAG	1 cut(s)	100
SfuI	TTCGAA	1 cut(s)	93
SgrAI	CRCCGGYG	1 cut(s)	368
SinI	GGWCC	2 cut(s)	123, 521
SlaI	CTCGAG	1 cut(s)	100
SmiMI	CAYNNNNRTG	4 cut(s)	540, 653, 720, 1139
SmlI	CTYRAG	2 cut(s)	100, 1007
SmoI	CTYRAG	2 cut(s)	100, 1007
SseBI	AGGCCT	1 cut(s)	801
SsiI	CCGC	1 cut(s)	363
SspMI	CTAG	2 cut(s)	1232, 1298
StuI	AGGCCT	1 cut(s)	801
StyD4I	CCNGG	1 cut(s)	790
StyI	CCWWGG	3 cut(s)	188, 570, 1213
TaaI	ACNGT	3 cut(s)	619, 697, 961
TaqI	TCGA	7 cut(s)	93, 101, 267, 350, 386, 554, 744
TaqII	GACCGA	1 cut(s)	996
TatI	WGTACW	3 cut(s)	57, 692, 702
TauI	GCSGC	1 cut(s)	366
TfiI	GAWTC	4 cut(s)	95, 477, 1245, 1471
Tru1I	TTAA	4 cut(s)	135, 1008, 1128, 1543
Tru9I	TTAA	4 cut(s)	135, 1008, 1128, 1543
TscAI	CASTG	5 cut(s)	43, 207, 487, 702, 722
TseFI	GTSAC	2 cut(s)	202, 1143
TseI	GCWGC	2 cut(s)	164, 587
Tsp45I	GTSAC	2 cut(s)	202, 1143
TspDTI	ATGAA	5 cut(s)	333, 497, 524, 594, 773
TspGWI	ACGGA	2 cut(s)	1240, 1541
TspRI	CASTG	5 cut(s)	43, 207, 487, 702, 722
Tth111I	GACNNNGTC	1 cut(s)	983
Vha464I	CTTAAG	1 cut(s)	1007
VpaK11BI	GGWCC	2 cut(s)	123, 521
XagI	CCTNNNNNAGG	2 cut(s)	68, 795
XapI	RAATTY	7 cut(s)	287, 503, 530, 593, 857, 971, 1221
XcmI	CCANNNNNNNNNTGG	1 cut(s)	904
XhoI	CTCGAG	1 cut(s)	100
XmiI	GTMKAC	1 cut(s)	450
XmnI	GAANNNNTTC	1 cut(s)	531
XspI	CTAG	2 cut(s)	1232, 1298
Zsp2I	ATGCAT	2 cut(s)	1211, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.