pycom05g15080

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
18606693 .. 18606917
225 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g15080.1

Sequence Viewer

Length: 225 bp
ATGAGGGAAACTGGAGTAAGGCCCTTGAGTATTGTGGATTTTGGTTCCACAAGTTGTTCAGTGGAAGGGACTCAATCAACATATCGTTTATCCACACCCACATTGGAAAATGCAATGAGGCAGAGGAAGCCATATAAAGGTTTGATTGGGTCATTGCAACAAACTCGTTGTATGCATGTTCTAGATTTGTATTGCCAAGGATTTGTATGCAATGGACATGTTTGA

Protein Analysis

75

Amino Acids

8.25

Weight (kDa)

8.86

Isoelectric Point (pI)

27.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 137
AflIII ACRYGT 1 cut(s) 217
AoxI GGCC 1 cut(s) 20
AspS9I GGNCC 1 cut(s) 21
BcgI CGANNNNNNTGC 2 cut(s) 146, 180
BfaI CTAG 1 cut(s) 182
BmgT120I GGNCC 1 cut(s) 21
BmiI GGNNCC 1 cut(s) 46
BpmI CTGGAG 1 cut(s) 33
BpuEI CTTGAG 1 cut(s) 46
BsaJI CCNNGG 1 cut(s) 196
Bsc4I CCNNNNNNNGG 1 cut(s) 137
Bse1I ACTGG 1 cut(s) 16
Bse3DI GCAATG 3 cut(s) 120, 152, 217
BseDI CCNNGG 1 cut(s) 196
BseLI CCNNNNNNNGG 1 cut(s) 137
BseMI GCAATG 3 cut(s) 120, 152, 217
BseNI ACTGG 1 cut(s) 16
BshFI GGCC 1 cut(s) 22
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 1 cut(s) 137
BsmFI GGGAC 1 cut(s) 82
BsnI GGCC 1 cut(s) 22
BspANI GGCC 1 cut(s) 22
BspLI GGNNCC 1 cut(s) 46
BsrDI GCAATG 3 cut(s) 120, 152, 217
BsrI ACTGG 1 cut(s) 16
BssECI CCNNGG 1 cut(s) 196
BssT1I CCWWGG 1 cut(s) 196
BstMWI GCNNNNNNNGC 1 cut(s) 127
BstNSI RCATGY 2 cut(s) 179, 221
BsuRI GGCC 1 cut(s) 22
BtsIMutI CAGTG 1 cut(s) 66
Cfr13I GGNCC 1 cut(s) 21
CviAII CATG 2 cut(s) 176, 218
CviJI RGCY 2 cut(s) 22, 130
CviKI_1 RGCY 2 cut(s) 22, 130
Eco130I CCWWGG 1 cut(s) 196
EcoO109I RGGNCCY 1 cut(s) 21
EcoT14I CCWWGG 1 cut(s) 196
EcoT22I ATGCAT 1 cut(s) 177
ErhI CCWWGG 1 cut(s) 196
FaeI CATG 2 cut(s) 179, 221
FaiI YATR 7 cut(s) 82, 133, 135, 173, 177, 208, 219
FaqI GGGAC 1 cut(s) 82
FatI CATG 2 cut(s) 175, 217
FspBI CTAG 1 cut(s) 182
GsuI CTGGAG 1 cut(s) 33
HaeIII GGCC 1 cut(s) 22
Hin1II CATG 2 cut(s) 179, 221
HinfI GANTC 1 cut(s) 70
Hpy188III TCNNGA 1 cut(s) 182
HpyAV CCTTC 1 cut(s) 59
HpyCH4V TGCA 4 cut(s) 113, 157, 175, 210
HpyF10VI GCNNNNNNNGC 1 cut(s) 127
Hsp92II CATG 2 cut(s) 179, 221
MaeI CTAG 1 cut(s) 182
MlyI GAGTC 1 cut(s) 64
MnlI CCTC 2 cut(s) 111, 117
Mph1103I ATGCAT 1 cut(s) 177
MwoI GCNNNNNNNGC 1 cut(s) 127
NlaIII CATG 2 cut(s) 179, 221
NlaIV GGNNCC 1 cut(s) 46
NsiI ATGCAT 1 cut(s) 177
NspI RCATGY 2 cut(s) 179, 221
PciI ACATGT 1 cut(s) 217
PleI GAGTC 1 cut(s) 64
PpsI GAGTC 1 cut(s) 64
PscI ACATGT 1 cut(s) 217
PspN4I GGNNCC 1 cut(s) 46
PspPI GGNCC 1 cut(s) 21
Sau96I GGNCC 1 cut(s) 21
SchI GAGTC 1 cut(s) 64
SetI ASST 1 cut(s) 142
SgeI CNNG 7 cut(s) 24, 37, 63, 177, 188, 194, 209
SmlI CTYRAG 1 cut(s) 25
SmoI CTYRAG 1 cut(s) 25
SspMI CTAG 1 cut(s) 182
StyI CCWWGG 1 cut(s) 196
TscAI CASTG 1 cut(s) 66
TspRI CASTG 1 cut(s) 66
XbaI TCTAGA 1 cut(s) 181
XceI RCATGY 2 cut(s) 179, 221
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
XspI CTAG 1 cut(s) 182
Zsp2I ATGCAT 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.