Serine threonine-protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48190 AT3G48190 AT3G48190 |
| fragaria_vesca | FvH4_2g11670 |
| malus_domestica | MD06G1173700.v1.1 |
| prunus_persica | Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 |
| pyrus_communis | pycom05g15080 pycom06g15490 pycom16g13670 |
| rosa_chinensis | RchiOBHm_Chr6g0271131 |
| rosa_laevigata | RLG00000013743 |
| rosa_multiflora | Rmu_sc0004675.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00233860 Rroxscaffold_4G00324410 Rroxscaffold_4G00324420 Rroxscaffold_5G00346090 Rroxscaffold_5G00348130 Rroxscaffold_5G00348580 Rroxscaffold_5G00348590 Rroxscaffold_5G00385810 Rroxscaffold_6G00394020 Rroxscaffold_7G00197250 Rroxscaffold_8G00436820 |
| rosa_rugosa | Rorug06G0058900 |
| rosa_samantha | Rh6AG178600 Rh6BG182100 Rh6CG177800 Rh6DG169700 |
| rosa_wichuraiana | Rw6G015260 Rw6G015300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4112 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3596 |
| AatII | GACGTC | 1 cut(s) | 1955 |
| Acc36I | ACCTGC | 1 cut(s) | 1876 |
| Acc65I | GGTACC | 1 cut(s) | 2299 |
| AccB1I | GGYRCC | 1 cut(s) | 2299 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4511 |
| AccBSI | CCGCTC | 1 cut(s) | 51 |
| AccI | GTMKAC | 2 cut(s) | 1949, 3412 |
| AccII | CGCG | 1 cut(s) | 4771 |
| AciI | CCGC | 8 cut(s) | 51, 899, 980, 1634, 1844, 1940, 2153, 3095 |
| AclWI | GGATC | 5 cut(s) | 743, 1464, 2198, 2779, 2913 |
| AcoI | YGGCCR | 2 cut(s) | 3199, 3945 |
| AcvI | CACGTG | 2 cut(s) | 163, 1056 |
| AcyI | GRCGYC | 1 cut(s) | 1952 |
| AdeI | CACNNNGTG | 1 cut(s) | 1136 |
| AfeI | AGCGCT | 1 cut(s) | 1861 |
| AflII | CTTAAG | 1 cut(s) | 3016 |
| AflIII | ACRYGT | 1 cut(s) | 1055 |
| AhlI | ACTAGT | 1 cut(s) | 4784 |
| AjiI | CACGTC | 1 cut(s) | 489 |
| AjnI | CCWGG | 4 cut(s) | 531, 3657, 3895, 4371 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 485, 517, 932, 964, 3414, 3446 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2877, 2909 |
| Alw21I | GWGCWC | 3 cut(s) | 1369, 2216, 2757 |
| Alw26I | GTCTC | 8 cut(s) | 107, 926, 950, 1401, 2333, 3247, 3305, 4750 |
| AlwI | GGATC | 5 cut(s) | 743, 1464, 2198, 2779, 2913 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4228 |
| Aor51HI | AGCGCT | 1 cut(s) | 1861 |
| AoxI | GGCC | 7 cut(s) | 283, 2256, 3199, 3945, 4584, 4694, 4810 |
| ApaI | GGGCCC | 1 cut(s) | 4588 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2130, 2162, 3386, 3418 |
| AseI | ATTAAT | 2 cut(s) | 1191, 1706 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1342, 1485 |
| Asp718I | GGTACC | 1 cut(s) | 2299 |
| AspLEI | GCGC | 3 cut(s) | 1862, 4023, 4662 |
| AspS9I | GGNCC | 6 cut(s) | 284, 1126, 2257, 3899, 4584, 4585 |
| AsuC2I | CCSGG | 3 cut(s) | 1155, 1902, 4448 |
| AsuHPI | GGTGA | 8 cut(s) | 398, 416, 635, 965, 2591, 3734, 4010, 4562 |
| AsuNHI | GCTAGC | 1 cut(s) | 482 |
| AvaII | GGWCC | 2 cut(s) | 1126, 3899 |
| BaeGI | GKGCMC | 2 cut(s) | 2656, 4588 |
| BalI | TGGCCA | 2 cut(s) | 3201, 3947 |
| BanI | GGYRCC | 1 cut(s) | 2299 |
| BanII | GRGCYC | 3 cut(s) | 2099, 2216, 4588 |
| BauI | CACGAG | 1 cut(s) | 4570 |
| BbrPI | CACGTG | 2 cut(s) | 163, 1056 |
| BbsI | GAAGAC | 2 cut(s) | 1549, 3264 |
| Bbv12I | GWGCWC | 3 cut(s) | 1369, 2216, 2757 |
| BbvCI | CCTCAGC | 2 cut(s) | 2693, 3680 |
| BceAI | ACGGC | 2 cut(s) | 3572, 4266 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4192, 4226 |
| BciT130I | CCWGG | 4 cut(s) | 533, 3659, 3897, 4373 |
| BciVI | GTATCC | 4 cut(s) | 1222, 3382, 4171, 4444 |
| BclI | TGATCA | 2 cut(s) | 2497, 2617 |
| BcnI | CCSGG | 3 cut(s) | 1155, 1902, 4448 |
| BcoDI | GTCTC | 8 cut(s) | 107, 926, 950, 1401, 2333, 3247, 3305, 4750 |
| BcuI | ACTAGT | 1 cut(s) | 4784 |
| BfmI | CTRYAG | 5 cut(s) | 128, 1206, 3022, 3050, 3099 |
| BfoI | RGCGCY | 1 cut(s) | 1863 |
| BfrI | CTTAAG | 1 cut(s) | 3016 |
| BfuAI | ACCTGC | 1 cut(s) | 1876 |
| BfuI | GTATCC | 4 cut(s) | 1222, 3382, 4171, 4444 |
| BglII | AGATCT | 4 cut(s) | 884, 3317, 3563, 4137 |
| BmcAI | AGTACT | 2 cut(s) | 2267, 2749 |
| Bme1390I | CCNGG | 7 cut(s) | 533, 1155, 1902, 3659, 3897, 4373, 4448 |
| Bme18I | GGWCC | 2 cut(s) | 1126, 3899 |
| BmgBI | CACGTC | 1 cut(s) | 489 |
| BmgT120I | GGNCC | 6 cut(s) | 284, 1126, 2257, 3899, 4584, 4585 |
| BmiI | GGNNCC | 9 cut(s) | 783, 1127, 1128, 2096, 2301, 2317, 2979, 4585, 4586 |
| BmrFI | CCNGG | 7 cut(s) | 533, 1155, 1902, 3659, 3897, 4373, 4448 |
| BmrI | ACTGGG | 2 cut(s) | 2099, 2563 |
| BmsI | GCATC | 7 cut(s) | 127, 1018, 1710, 1803, 3442, 4426, 4714 |
| BmtI | GCTAGC | 1 cut(s) | 486 |
| BmuI | ACTGGG | 2 cut(s) | 2099, 2563 |
| BpiI | GAAGAC | 2 cut(s) | 1549, 3264 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1077, 1109, 1397, 1429 |
| BpmI | CTGGAG | 5 cut(s) | 713, 2269, 2528, 2996, 3641 |
| Bpu10I | CCTNAGC | 3 cut(s) | 681, 2693, 3680 |
| BpuEI | CTTGAG | 4 cut(s) | 1308, 2282, 3075, 3313 |
| BpuMI | CCSGG | 3 cut(s) | 1155, 1902, 4448 |
| Bsa29I | ATCGAT | 2 cut(s) | 2166, 4822 |
| BsaAI | YACGTR | 3 cut(s) | 163, 1056, 2050 |
| BsaBI | GATNNNNATC | 5 cut(s) | 747, 2502, 3221, 3282, 4142 |
| BsaHI | GRCGYC | 1 cut(s) | 1952 |
| BsaI | GGTCTC | 1 cut(s) | 1401 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 429, 459, 2045, 2075, 2702, 2732, 4311, 4341 |
| Bse118I | RCCGGY | 2 cut(s) | 426, 1232 |
| Bse3DI | GCAATG | 6 cut(s) | 1585, 1950, 2391, 2423, 3513, 3636 |
| Bse8I | GATNNNNATC | 5 cut(s) | 747, 2502, 3221, 3282, 4142 |
| BseBI | CCWGG | 4 cut(s) | 533, 3659, 3897, 4373 |
| BseCI | ATCGAT | 2 cut(s) | 2166, 4822 |
| BseGI | GGATG | 9 cut(s) | 704, 1072, 1170, 1297, 2193, 2857, 3667, 3843, 3955 |
| BseJI | GATNNNNATC | 5 cut(s) | 747, 2502, 3221, 3282, 4142 |
| BseMI | GCAATG | 6 cut(s) | 1585, 1950, 2391, 2423, 3513, 3636 |
| BseMII | CTCAG | 9 cut(s) | 32, 46, 870, 1583, 2174, 2684, 2742, 3694, 3917 |
| BseRI | GAGGAG | 2 cut(s) | 716, 3656 |
| BseSI | GKGCMC | 2 cut(s) | 2656, 4588 |
| BsgI | GTGCAG | 5 cut(s) | 313, 365, 552, 1036, 1956 |
| Bsh1236I | CGCG | 1 cut(s) | 4771 |
| BshFI | GGCC | 7 cut(s) | 285, 2258, 3201, 3947, 4586, 4696, 4812 |
| BshNI | GGYRCC | 1 cut(s) | 2299 |
| BshVI | ATCGAT | 2 cut(s) | 2166, 4822 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1369, 2216, 2757 |
| BsiSI | CCGG | 5 cut(s) | 427, 1155, 1233, 1902, 4447 |
| BslFI | GGGAC | 6 cut(s) | 67, 1139, 1976, 2502, 3683, 4622 |
| BsmAI | GTCTC | 8 cut(s) | 107, 926, 950, 1401, 2333, 3247, 3305, 4750 |
| BsmFI | GGGAC | 6 cut(s) | 67, 1139, 1976, 2502, 3683, 4622 |
| BsmI | GAATGC | 6 cut(s) | 666, 982, 1786, 2990, 4373, 4667 |
| BsnI | GGCC | 7 cut(s) | 285, 2258, 3201, 3947, 4586, 4696, 4812 |
| Bso31I | GGTCTC | 1 cut(s) | 1401 |
| Bsp120I | GGGCCC | 1 cut(s) | 4584 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1369, 2099, 2216, 2656, 2757, 4588 |
| Bsp19I | CCATGG | 3 cut(s) | 2683, 2901, 4588 |
| BspACI | CCGC | 8 cut(s) | 51, 899, 980, 1634, 1844, 1940, 2153, 3095 |
| BspANI | GGCC | 7 cut(s) | 285, 2258, 3201, 3947, 4586, 4696, 4812 |
| BspCNI | CTCAG | 9 cut(s) | 33, 45, 871, 1584, 2173, 2685, 2743, 3693, 3916 |
| BspDI | ATCGAT | 2 cut(s) | 2166, 4822 |
| BspFNI | CGCG | 1 cut(s) | 4771 |
| BspHI | TCATGA | 4 cut(s) | 1012, 1195, 2500, 4285 |
| BspLI | GGNNCC | 9 cut(s) | 783, 1127, 1128, 2096, 2301, 2317, 2979, 4585, 4586 |
| BspMAI | CTGCAG | 3 cut(s) | 132, 3054, 3103 |
| BspMI | ACCTGC | 1 cut(s) | 1876 |
| BspOI | GCTAGC | 1 cut(s) | 486 |
| BspPI | GGATC | 5 cut(s) | 743, 1464, 2198, 2779, 2913 |
| BspQI | GCTCTTC | 2 cut(s) | 1335, 2061 |
| BspT107I | GGYRCC | 1 cut(s) | 2299 |
| BspTI | CTTAAG | 1 cut(s) | 3016 |
| BspTNI | GGTCTC | 1 cut(s) | 1401 |
| BsrBI | CCGCTC | 1 cut(s) | 51 |
| BsrDI | GCAATG | 6 cut(s) | 1585, 1950, 2391, 2423, 3513, 3636 |
| BsrFI | RCCGGY | 2 cut(s) | 426, 1232 |
| BssAI | RCCGGY | 2 cut(s) | 426, 1232 |
| BssNI | GRCGYC | 1 cut(s) | 1952 |
| BssSI | CACGAG | 1 cut(s) | 4570 |
| BssT1I | CCWWGG | 8 cut(s) | 2295, 2467, 2683, 2901, 3202, 3921, 4588, 4813 |
| Bst2BI | CACGAG | 1 cut(s) | 4570 |
| Bst2UI | CCWGG | 4 cut(s) | 533, 3659, 3897, 4373 |
| BstACI | GRCGYC | 1 cut(s) | 1952 |
| BstAFI | CTTAAG | 1 cut(s) | 3016 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3446 |
| BstBAI | YACGTR | 3 cut(s) | 163, 1056, 2050 |
| BstDSI | CCRYGG | 3 cut(s) | 2683, 2901, 4588 |
| BstEII | GGTNACC | 1 cut(s) | 3998 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3071 |
| BstF5I | GGATG | 9 cut(s) | 704, 1072, 1170, 1297, 2193, 2857, 3667, 3843, 3955 |
| BstFNI | CGCG | 1 cut(s) | 4771 |
| BstH2I | RGCGCY | 1 cut(s) | 1863 |
| BstHHI | GCGC | 3 cut(s) | 1862, 4023, 4662 |
| BstMAI | GTCTC | 8 cut(s) | 107, 926, 950, 1401, 2333, 3247, 3305, 4750 |
| BstNI | CCWGG | 4 cut(s) | 533, 3659, 3897, 4373 |
| BstNSI | RCATGY | 5 cut(s) | 419, 423, 663, 2450, 3808 |
| BstPI | GGTNACC | 1 cut(s) | 3998 |
| BstSCI | CCNGG | 7 cut(s) | 531, 1153, 1900, 3657, 3895, 4371, 4446 |
| BstSFI | CTRYAG | 5 cut(s) | 128, 1206, 3022, 3050, 3099 |
| BstSLI | GKGCMC | 2 cut(s) | 2656, 4588 |
| BstUI | CGCG | 1 cut(s) | 4771 |
| BstV2I | GAAGAC | 2 cut(s) | 1549, 3264 |
| BstX2I | RGATCY | 6 cut(s) | 884, 1456, 2784, 3317, 3563, 4137 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4743 |
| BstYI | RGATCY | 6 cut(s) | 884, 1456, 2784, 3317, 3563, 4137 |
| Bsu15I | ATCGAT | 2 cut(s) | 2166, 4822 |
| BsuI | GTATCC | 4 cut(s) | 1222, 3382, 4171, 4444 |
| BsuRI | GGCC | 7 cut(s) | 285, 2258, 3201, 3947, 4586, 4696, 4812 |
| BsuTUI | ATCGAT | 2 cut(s) | 2166, 4822 |
| BtgI | CCRYGG | 3 cut(s) | 2683, 2901, 4588 |
| BtgZI | GCGATG | 1 cut(s) | 3269 |
| BtrI | CACGTC | 1 cut(s) | 489 |
| BtsCI | GGATG | 9 cut(s) | 704, 1072, 1170, 1297, 2193, 2857, 3667, 3843, 3955 |
| BtsIMutI | CAGTG | 7 cut(s) | 1562, 2087, 2310, 2337, 2654, 3826, 4226 |
| BveI | ACCTGC | 1 cut(s) | 1876 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4228 |
| CciI | TCATGA | 4 cut(s) | 1012, 1195, 2500, 4285 |
| CfoI | GCGC | 3 cut(s) | 1862, 4023, 4662 |
| Cfr10I | RCCGGY | 2 cut(s) | 426, 1232 |
| Cfr13I | GGNCC | 6 cut(s) | 284, 1126, 2257, 3899, 4584, 4585 |
| ClaI | ATCGAT | 2 cut(s) | 2166, 4822 |
| CseI | GACGC | 1 cut(s) | 13 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 636, 671 |
| DraI | TTTAAA | 3 cut(s) | 229, 586, 1266 |
| DraIII | CACNNNGTG | 1 cut(s) | 1136 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3596 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3596 |
| EaeI | YGGCCR | 2 cut(s) | 3199, 3945 |
| EciI | GGCGGA | 2 cut(s) | 888, 1859 |
| Ecl136II | GAGCTC | 1 cut(s) | 2214 |
| Eco130I | CCWWGG | 8 cut(s) | 2295, 2467, 2683, 2901, 3202, 3921, 4588, 4813 |
| Eco147I | AGGCCT | 1 cut(s) | 4696 |
| Eco24I | GRGCYC | 3 cut(s) | 2099, 2216, 4588 |
| Eco31I | GGTCTC | 1 cut(s) | 1401 |
| Eco32I | GATATC | 2 cut(s) | 38, 802 |
| Eco47I | GGWCC | 2 cut(s) | 1126, 3899 |
| Eco47III | AGCGCT | 1 cut(s) | 1861 |
| Eco53kI | GAGCTC | 1 cut(s) | 2214 |
| Eco72I | CACGTG | 2 cut(s) | 163, 1056 |
| Eco91I | GGTNACC | 1 cut(s) | 3998 |
| EcoICRI | GAGCTC | 1 cut(s) | 2214 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3071 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1126, 2257, 3899, 4584 |
| EcoO65I | GGTNACC | 1 cut(s) | 3998 |
| EcoRI | GAATTC | 3 cut(s) | 12, 1338, 2678 |
| EcoRII | CCWGG | 4 cut(s) | 531, 3657, 3895, 4371 |
| EcoRV | GATATC | 2 cut(s) | 38, 802 |
| EcoT14I | CCWWGG | 8 cut(s) | 2295, 2467, 2683, 2901, 3202, 3921, 4588, 4813 |
| EcoT22I | ATGCAT | 3 cut(s) | 421, 2448, 4707 |
| EcoT38I | GRGCYC | 3 cut(s) | 2099, 2216, 4588 |
| ErhI | CCWWGG | 8 cut(s) | 2295, 2467, 2683, 2901, 3202, 3921, 4588, 4813 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1268, 1300, 3174, 3206 |
| FaqI | GGGAC | 6 cut(s) | 67, 1139, 1976, 2502, 3683, 4622 |
| FauI | CCCGC | 1 cut(s) | 44 |
| FauNDI | CATATG | 1 cut(s) | 74 |
| FbaI | TGATCA | 2 cut(s) | 2497, 2617 |
| FblI | GTMKAC | 2 cut(s) | 1949, 3412 |
| FokI | GGATG | 9 cut(s) | 691, 1079, 1157, 1304, 2180, 2844, 3674, 3830, 3942 |
| FriOI | GRGCYC | 3 cut(s) | 2099, 2216, 4588 |
| GlaI | GCGC | 3 cut(s) | 1861, 4022, 4661 |
| GsuI | CTGGAG | 5 cut(s) | 713, 2269, 2528, 2996, 3641 |
| HaeII | RGCGCY | 1 cut(s) | 1863 |
| HaeIII | GGCC | 7 cut(s) | 285, 2258, 3201, 3947, 4586, 4696, 4812 |
| HapII | CCGG | 5 cut(s) | 427, 1155, 1233, 1902, 4447 |
| HgaI | GACGC | 1 cut(s) | 13 |
| HhaI | GCGC | 3 cut(s) | 1862, 4023, 4662 |
| Hin1I | GRCGYC | 1 cut(s) | 1952 |
| Hin6I | GCGC | 3 cut(s) | 1860, 4021, 4660 |
| HinP1I | GCGC | 3 cut(s) | 1860, 4021, 4660 |
| HincII | GTYRAC | 6 cut(s) | 183, 328, 1426, 1693, 1950, 4089 |
| HindII | GTYRAC | 6 cut(s) | 183, 328, 1426, 1693, 1950, 4089 |
| HindIII | AAGCTT | 4 cut(s) | 212, 843, 3188, 4058 |
| HpaI | GTTAAC | 1 cut(s) | 4089 |
| HpaII | CCGG | 5 cut(s) | 427, 1155, 1233, 1902, 4447 |
| HphI | GGTGA | 8 cut(s) | 398, 416, 635, 965, 2591, 3734, 4010, 4562 |
| Hpy99I | CGWCG | 1 cut(s) | 1954 |
| HpyAV | CCTTC | 9 cut(s) | 796, 905, 1668, 1672, 2239, 2479, 3165, 3379, 4283 |
| HpyCH4IV | ACGT | 7 cut(s) | 162, 488, 1055, 1952, 2049, 2284, 2818 |
| HpySE526I | ACGT | 7 cut(s) | 162, 488, 1055, 1952, 2049, 2284, 2818 |
| Hsp92I | GRCGYC | 1 cut(s) | 1952 |
| HspAI | GCGC | 3 cut(s) | 1860, 4021, 4660 |
| KflI | GGGWCCC | 1 cut(s) | 1126 |
| KpnI | GGTACC | 1 cut(s) | 2303 |
| Ksp22I | TGATCA | 2 cut(s) | 2497, 2617 |
| KspAI | GTTAAC | 1 cut(s) | 4089 |
| LguI | GCTCTTC | 2 cut(s) | 1335, 2061 |
| LweI | GCATC | 7 cut(s) | 127, 1018, 1710, 1803, 3442, 4426, 4714 |
| MaeII | ACGT | 7 cut(s) | 162, 488, 1055, 1952, 2049, 2284, 2818 |
| MbiI | CCGCTC | 1 cut(s) | 51 |
| MflI | RGATCY | 6 cut(s) | 884, 1456, 2784, 3317, 3563, 4137 |
| MhlI | GDGCHC | 6 cut(s) | 1369, 2099, 2216, 2656, 2757, 4588 |
| MlsI | TGGCCA | 2 cut(s) | 3201, 3947 |
| MluNI | TGGCCA | 2 cut(s) | 3201, 3947 |
| MlyI | GAGTC | 6 cut(s) | 251, 928, 1193, 1736, 2335, 3278 |
| MmeI | TCCRAC | 4 cut(s) | 415, 1063, 1096, 2801 |
| Mox20I | TGGCCA | 2 cut(s) | 3201, 3947 |
| Mph1103I | ATGCAT | 3 cut(s) | 421, 2448, 4707 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1342, 1485 |
| MscI | TGGCCA | 2 cut(s) | 3201, 3947 |
| MslI | CAYNNNNRTG | 5 cut(s) | 414, 1017, 2061, 2117, 2625 |
| Msp20I | TGGCCA | 2 cut(s) | 3201, 3947 |
| MspA1I | CMGCKG | 3 cut(s) | 1940, 4402, 4739 |
| MspCI | CTTAAG | 1 cut(s) | 3016 |
| MspI | CCGG | 5 cut(s) | 427, 1155, 1233, 1902, 4447 |
| MspR9I | CCNGG | 7 cut(s) | 533, 1155, 1902, 3659, 3897, 4373, 4448 |
| Mva1269I | GAATGC | 6 cut(s) | 666, 982, 1786, 2990, 4373, 4667 |
| MvaI | CCWGG | 4 cut(s) | 533, 3659, 3897, 4373 |
| MvnI | CGCG | 1 cut(s) | 4771 |
| NciI | CCSGG | 3 cut(s) | 1155, 1902, 4448 |
| NcoI | CCATGG | 3 cut(s) | 2683, 2901, 4588 |
| NdeI | CATATG | 1 cut(s) | 74 |
| NheI | GCTAGC | 1 cut(s) | 482 |
| NlaIV | GGNNCC | 9 cut(s) | 783, 1127, 1128, 2096, 2301, 2317, 2979, 4585, 4586 |
| NmeAIII | GCCGAG | 2 cut(s) | 927, 4655 |
| NmuCI | GTSAC | 9 cut(s) | 422, 1041, 2155, 2199, 2579, 3587, 3722, 3998, 4246 |
| NsiI | ATGCAT | 3 cut(s) | 421, 2448, 4707 |
| NspI | RCATGY | 5 cut(s) | 419, 423, 663, 2450, 3808 |
| PaeI | GCATGC | 2 cut(s) | 419, 3808 |
| PagI | TCATGA | 4 cut(s) | 1012, 1195, 2500, 4285 |
| PceI | AGGCCT | 1 cut(s) | 4696 |
| PciSI | GCTCTTC | 2 cut(s) | 1335, 2061 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3374 |
| PctI | GAATGC | 6 cut(s) | 666, 982, 1786, 2990, 4373, 4667 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1342, 1485 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4511 |
| PfoI | TCCNGGA | 2 cut(s) | 1153, 3657 |
| PleI | GAGTC | 6 cut(s) | 251, 927, 1193, 1736, 2335, 3277 |
| PmaCI | CACGTG | 2 cut(s) | 163, 1056 |
| PmlI | CACGTG | 2 cut(s) | 163, 1056 |
| PpsI | GAGTC | 6 cut(s) | 251, 927, 1193, 1736, 2335, 3277 |
| Ppu21I | YACGTR | 3 cut(s) | 163, 1056, 2050 |
| PpuMI | RGGWCCY | 2 cut(s) | 1126, 3899 |
| PshBI | ATTAAT | 2 cut(s) | 1191, 1706 |
| PsiI | TTATAA | 1 cut(s) | 4112 |
| Psp124BI | GAGCTC | 1 cut(s) | 2216 |
| Psp5II | RGGWCCY | 2 cut(s) | 1126, 3899 |
| Psp6I | CCWGG | 4 cut(s) | 531, 3657, 3895, 4371 |
| PspCI | CACGTG | 2 cut(s) | 163, 1056 |
| PspEI | GGTNACC | 1 cut(s) | 3998 |
| PspGI | CCWGG | 4 cut(s) | 531, 3657, 3895, 4371 |
| PspN4I | GGNNCC | 9 cut(s) | 783, 1127, 1128, 2096, 2301, 2317, 2979, 4585, 4586 |
| PspOMI | GGGCCC | 1 cut(s) | 4584 |
| PspPI | GGNCC | 6 cut(s) | 284, 1126, 2257, 3899, 4584, 4585 |
| PspPPI | RGGWCCY | 2 cut(s) | 1126, 3899 |
| PstI | CTGCAG | 3 cut(s) | 132, 3054, 3103 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4228 |
| PsuI | RGATCY | 6 cut(s) | 884, 1456, 2784, 3317, 3563, 4137 |
| PvuII | CAGCTG | 2 cut(s) | 4402, 4739 |
| RseI | CAYNNNNRTG | 5 cut(s) | 414, 1017, 2061, 2117, 2625 |
| SacI | GAGCTC | 1 cut(s) | 2216 |
| SalI | GTCGAC | 1 cut(s) | 1948 |
| SapI | GCTCTTC | 2 cut(s) | 1335, 2061 |
| Sau96I | GGNCC | 6 cut(s) | 284, 1126, 2257, 3899, 4584, 4585 |
| ScaI | AGTACT | 2 cut(s) | 2267, 2749 |
| SchI | GAGTC | 6 cut(s) | 251, 928, 1193, 1736, 2335, 3278 |
| ScrFI | CCNGG | 7 cut(s) | 533, 1155, 1902, 3659, 3897, 4373, 4448 |
| SduI | GDGCHC | 6 cut(s) | 1369, 2099, 2216, 2656, 2757, 4588 |
| SfaNI | GCATC | 7 cut(s) | 127, 1018, 1710, 1803, 3442, 4426, 4714 |
| SfcI | CTRYAG | 5 cut(s) | 128, 1206, 3022, 3050, 3099 |
| SinI | GGWCC | 2 cut(s) | 1126, 3899 |
| SmiI | ATTTAAAT | 1 cut(s) | 229 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 414, 1017, 2061, 2117, 2625 |
| SmlI | CTYRAG | 5 cut(s) | 1323, 2261, 3016, 3090, 3328 |
| SmoI | CTYRAG | 5 cut(s) | 1323, 2261, 3016, 3090, 3328 |
| SpeI | ACTAGT | 1 cut(s) | 4784 |
| SphI | GCATGC | 2 cut(s) | 419, 3808 |
| SseBI | AGGCCT | 1 cut(s) | 4696 |
| SsiI | CCGC | 8 cut(s) | 51, 899, 980, 1634, 1844, 1940, 2153, 3095 |
| SstI | GAGCTC | 1 cut(s) | 2216 |
| StuI | AGGCCT | 1 cut(s) | 4696 |
| StyD4I | CCNGG | 7 cut(s) | 531, 1153, 1900, 3657, 3895, 4371, 4446 |
| StyI | CCWWGG | 8 cut(s) | 2295, 2467, 2683, 2901, 3202, 3921, 4588, 4813 |
| SwaI | ATTTAAAT | 1 cut(s) | 229 |
| TaiI | ACGT | 7 cut(s) | 165, 491, 1058, 1955, 2052, 2287, 2821 |
| TaqII | GACCGA | 1 cut(s) | 3586 |
| TatI | WGTACW | 3 cut(s) | 197, 2265, 2747 |
| TauI | GCSGC | 2 cut(s) | 1943, 3098 |
| TscAI | CASTG | 7 cut(s) | 1569, 2094, 2310, 2337, 2661, 3826, 4233 |
| TseFI | GTSAC | 9 cut(s) | 422, 1041, 2155, 2199, 2579, 3587, 3722, 3998, 4246 |
| Tsp45I | GTSAC | 9 cut(s) | 422, 1041, 2155, 2199, 2579, 3587, 3722, 3998, 4246 |
| TspGWI | ACGGA | 4 cut(s) | 200, 1288, 2965, 3059 |
| TspRI | CASTG | 7 cut(s) | 1569, 2094, 2310, 2337, 2661, 3826, 4233 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4511 |
| Vha464I | CTTAAG | 1 cut(s) | 3016 |
| VpaK11BI | GGWCC | 2 cut(s) | 1126, 3899 |
| VspI | ATTAAT | 2 cut(s) | 1191, 1706 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3071 |
| XbaI | TCTAGA | 2 cut(s) | 1459, 3080 |
| XceI | RCATGY | 5 cut(s) | 419, 423, 663, 2450, 3808 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 217, 2371, 4595, 4789 |
| XmiI | GTMKAC | 2 cut(s) | 1949, 3412 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1342, 1485 |
| ZraI | GACGTC | 1 cut(s) | 1953 |
| ZrmI | AGTACT | 2 cut(s) | 2267, 2749 |
| Zsp2I | ATGCAT | 3 cut(s) | 421, 2448, 4707 |