No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48190 AT3G48190 AT3G48190 |
| fragaria_vesca | FvH4_2g11670 |
| malus_domestica | MD06G1173700.v1.1 |
| prunus_persica | Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 |
| pyrus_communis | pycom05g15080 pycom06g15490 pycom16g13670 |
| rosa_chinensis | RchiOBHm_Chr6g0271131 |
| rosa_laevigata | RLG00000013743 |
| rosa_multiflora | Rmu_sc0004675.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00233860 Rroxscaffold_4G00324410 Rroxscaffold_4G00324420 Rroxscaffold_5G00346090 Rroxscaffold_5G00348130 Rroxscaffold_5G00348580 Rroxscaffold_5G00348590 Rroxscaffold_5G00385810 Rroxscaffold_6G00394020 Rroxscaffold_7G00197250 Rroxscaffold_8G00436820 |
| rosa_rugosa | Rorug06G0058900 |
| rosa_samantha | Rh6AG178600 Rh6BG182100 Rh6CG177800 Rh6DG169700 |
| rosa_wichuraiana | Rw6G015260 Rw6G015300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 121 |
| AgsI | TTSAA | 1 cut(s) | 59 |
| AjnI | CCWGG | 1 cut(s) | 114 |
| AluBI | AGCT | 3 cut(s) | 55, 68, 216 |
| AluI | AGCT | 3 cut(s) | 55, 68, 216 |
| Ama87I | CYCGRG | 1 cut(s) | 42 |
| AseI | ATTAAT | 1 cut(s) | 162 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| AvaI | CYCGRG | 1 cut(s) | 42 |
| BceAI | ACGGC | 2 cut(s) | 114, 181 |
| BciT130I | CCWGG | 1 cut(s) | 116 |
| BlpI | GCTNAGC | 1 cut(s) | 192 |
| Bme1390I | CCNGG | 1 cut(s) | 116 |
| BmeT110I | CYCGRG | 1 cut(s) | 42 |
| BmrFI | CCNGG | 1 cut(s) | 116 |
| BmsI | GCATC | 1 cut(s) | 196 |
| BpmI | CTGGAG | 1 cut(s) | 98 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 192 |
| BsaJI | CCNNGG | 1 cut(s) | 115 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 19, 49 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 121 |
| Bse1I | ACTGG | 1 cut(s) | 139 |
| BseBI | CCWGG | 1 cut(s) | 116 |
| BseDI | CCNNGG | 1 cut(s) | 115 |
| BseGI | GGATG | 1 cut(s) | 96 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 121 |
| BseNI | ACTGG | 1 cut(s) | 139 |
| BsiHKCI | CYCGRG | 1 cut(s) | 42 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 121 |
| BsoBI | CYCGRG | 1 cut(s) | 42 |
| Bsp143I | GATC | 2 cut(s) | 21, 235 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 192 |
| BsrI | ACTGG | 1 cut(s) | 139 |
| BssECI | CCNNGG | 1 cut(s) | 115 |
| BssMI | GATC | 2 cut(s) | 21, 235 |
| Bst2UI | CCWGG | 1 cut(s) | 116 |
| Bst4CI | ACNGT | 1 cut(s) | 132 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstF5I | GGATG | 1 cut(s) | 96 |
| BstKTI | GATC | 2 cut(s) | 24, 238 |
| BstMBI | GATC | 2 cut(s) | 21, 235 |
| BstNI | CCWGG | 1 cut(s) | 116 |
| BstSCI | CCNGG | 1 cut(s) | 114 |
| BtsCI | GGATG | 1 cut(s) | 96 |
| CviAII | CATG | 1 cut(s) | 71 |
| CviJI | RGCY | 5 cut(s) | 55, 68, 101, 196, 216 |
| CviKI_1 | RGCY | 5 cut(s) | 55, 68, 101, 196, 216 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| DpnI | GATC | 2 cut(s) | 23, 237 |
| DpnII | GATC | 2 cut(s) | 21, 235 |
| Eco88I | CYCGRG | 1 cut(s) | 42 |
| EcoRII | CCWGG | 1 cut(s) | 114 |
| FaeI | CATG | 1 cut(s) | 74 |
| FaiI | YATR | 6 cut(s) | 11, 72, 104, 167, 203, 247 |
| FatI | CATG | 1 cut(s) | 70 |
| FokI | GGATG | 1 cut(s) | 103 |
| GsuI | CTGGAG | 1 cut(s) | 98 |
| Hin1II | CATG | 1 cut(s) | 74 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 25, 35, 239 |
| HpyAV | CCTTC | 1 cut(s) | 43 |
| HpyCH4III | ACNGT | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 2 cut(s) | 135, 209 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| Hsp92II | CATG | 1 cut(s) | 74 |
| Kzo9I | GATC | 2 cut(s) | 21, 235 |
| LmnI | GCTCC | 3 cut(s) | 52, 117, 221 |
| LpnPI | CCDG | 3 cut(s) | 101, 128, 152 |
| LweI | GCATC | 1 cut(s) | 196 |
| MalI | GATC | 2 cut(s) | 23, 237 |
| MboI | GATC | 2 cut(s) | 21, 235 |
| MboII | GAAGA | 1 cut(s) | 71 |
| MluCI | AATT | 2 cut(s) | 155, 231 |
| MmeI | TCCRAC | 1 cut(s) | 68 |
| MnlI | CCTC | 2 cut(s) | 23, 75 |
| MseI | TTAA | 2 cut(s) | 143, 162 |
| MspR9I | CCNGG | 1 cut(s) | 116 |
| MvaI | CCWGG | 1 cut(s) | 116 |
| NdeII | GATC | 2 cut(s) | 21, 235 |
| NlaIII | CATG | 1 cut(s) | 74 |
| PshBI | ATTAAT | 1 cut(s) | 162 |
| Psp6I | CCWGG | 1 cut(s) | 114 |
| PspGI | CCWGG | 1 cut(s) | 114 |
| SaqAI | TTAA | 2 cut(s) | 143, 162 |
| Sau3AI | GATC | 2 cut(s) | 21, 235 |
| ScrFI | CCNGG | 1 cut(s) | 116 |
| SetI | ASST | 6 cut(s) | 34, 57, 70, 86, 126, 218 |
| SfaNI | GCATC | 1 cut(s) | 196 |
| Sse9I | AATT | 2 cut(s) | 155, 231 |
| StyD4I | CCNGG | 1 cut(s) | 114 |
| TaaI | ACNGT | 1 cut(s) | 132 |
| TasI | AATT | 2 cut(s) | 155, 231 |
| Tru1I | TTAA | 2 cut(s) | 143, 162 |
| Tru9I | TTAA | 2 cut(s) | 143, 162 |
| TspDTI | ATGAA | 1 cut(s) | 119 |
| VspI | ATTAAT | 1 cut(s) | 162 |