Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000008

Orthogroup ID

OG0002934

Physical Location & Seq

Genomic Coordinates Reverse (-)

137 .. 14259

Gene Structure 14123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_8G00436820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3048 bp

ATGTTACAACTGAATATGACAAGAGGTGCTACTGATGGGAGCTTTTTGGTACAACAACTTTTAGACATAGTGTACAAGGAATTAGATCAAAGCTCTGTATCCAATACAATTGTGCCCAGGACTGATGCAGCTAAATATGAGAAGTTTGGAACTTTGAGCAGCTCTCATTGTGCCTTGGTTGAGCTTGCAGCTGCTGTACTTTATAGGGCTTGTATTAACTTTACAAAAGCACCATCAACTGAAAAGAGGGTCAAGAGAGAGCATGTTGCTGCCCATTTACGAGAGGCTCTCATGAAGGGGAAATGGTTATGGTATGCTTCATTTTGTTGTCTTACTCGTAAGTACTCTACACGCATTGGTAAAGATCTTTTTATGTACTGGTTCGAGGGGATATGTACAAGCTTTCAAAGAATTTTGAACGAGGCAAATGTGGGGCATGCTTATGATGGTTTGCTATGGACACTGAGGAGCCTGCAGGAACTCTCTTCTGTGTTGTTGCTTCCGGATCCAAAGCGGAAAAAGCCATCAAGCTCCTCTCCCTTGAATGAGTTTGACTGTGGTTGGCAATTAGTATGGAGCTGCCTTATGCAGGGCTTCCCGTTGTTCAGTAATGTAACTGCAGTTGTAGATGCAGCTCTGGTGCTCCTGGGAAACATAATTTCAATTGATCTTGTACATACATGTGTCGTACCTCAGGATGTATGGGACCTTAGGATATTCAAACAAATGCCGTCAGTGTCTTTGTTGTACTTTATATCCTGTTACTTTTCAAGGAAAGGTTCGCAAGGTGATGTTCGAGACATTTTACACCTGAGAAAAAACCTCCTGAGAGCAGTTTTGGGTCAACTCAAGGAGATGGAGAGTTCCATACATAACGAGCAGTTGGTGTTATTATTGCCTGCAGCTGTTAATGCTCTTTGTGCTGGTTGTGTTCCTTTTACACAATGCCACACTGGACTAATCCAATCTTACACTTCTCTAGATGCTACTGATGCTGTAAATAAGACAGAAAAACCTGAGCACAATTGTCTGCATGGACTATTCGACTGCACTGTGGAGGTTCTCGCTGATATTGGTCCAGGTCTGAGCGTTGAGGTTTTCCCATCCCAACACTATCCAAATCTACGGCTTCCCAGGCAATTAAGAGAACCACTGCTTGCTGAGATGGAGACTCAAATTCTTGGAGCTCTAGTGGAGAAGGAGATGAGAAGGAGATCTTTGTCAGATATATTCTTTAAATGTGCTATATTGTCAAACATCATCTATGGTTCAGTCTTGACAAGGCAAAGAGAGGAAGTTTCATCATTTGTCTCAAAATTGGGTCGATACCTGTTAGAATTGCTGGATTGTGCTGTTACTGTCACCCAGGGAAATGATTGTCTAGCTCTCAGTTCTGATCTCCTATCTAATGGAGCAAGCTCTATTGTTGCTTCCTTTAGAAGTTTTGCTCATTCCCCTATCTTTAGTCGACAGCACGATCAAAATCATGTCGATGCTGAACTATATGGTGCCATAATGCAAGTGATGGAGAGGCTCTTAAAAGCGATGTCTAATGTGTATGAAGAGTATTCCAGTGGTGCAGGAGAACGTTTAACTGCATGTGATACGCTAAAACAATATTCTTTCCCTGCTGATAGCAATAAAAGTAGGATTGTGGACATGGAATTGGATGTTAATGAGGATACCGGAGATATGGATACATTATCTGATGGTGGCAAAACTGCCAGTGGTGTATTCTCTTCTGTAGAGAAATGGAAGCTGGGCATGATATCGCTTATTTCTAATTTTTTCTCAGTTTTACACACAACTTGGGATGTCCTGTTTAAGCTCCTGTCAAAAGAAAGGGATCAAATGGTCAGGGAGAAAATTATGTTTAGTCTTTGTCAACATCCCTTCTGGTCCTCTGCTGAAAATTTCAAGGAAATGGTCGGTTTAATGACTAAAATGATTAAGATACAAGTGAGTCTTAAGCTTGATTGTGGTAAGGTATTATCTGCTTTCCATGGTTTGCTGGGGACACTATCATCCTTGGACACTAACTGGAAAGATAAAGGTTTCACTGACTCTTTAGGTGAAAGGGGACCTGAGCAGAACTTGATGCATCTTCGAGATGCGGTTGCTGAATGTGATCTTCTTGACTGGTTTGGACGTGTTAAGCTCATCGATTGCATATGCAATTTTGTTTTACTCAGTCCTCAAATTGGTCAGACACTGATTGAAAGGTTGTTGACGATGCTTCAAGATCCTGATTATCGAGTTCGGTTCTCCCTGGCTAGAAGGATCGGTGTTCTTTTCCGAACGTGGGATGGACATGAGGAATTATTCAACGATATATGTTCCAACTTTGGTGTGATGTTGGTGGTATCCTCAAAAGAAAAACTTGTTACTGCAAGTGAGGTCTTAGCTAGTGGTCCACAGCCTCAGCCCACGATGGAAACTGTCATTATTACTCTCATGCATCTTGCTTTGCAAAGTGAGAAAATAGAGTTGGAGGCTGTATTCATGATATGCGTGGTTGCTGCTATTGATCCTTGTCAGAGGGAATTGATCTTTGTAATACTTGACAATCTCTCAAGGCAGCTGGGCTATGCAAGCAGGTTTAAGTACTTGGAGGAGCTTTTAGGATCAATTCTCTTTAGTTGGGTTGCTTGTGGTGTAAGCCTCGCTGCACTTGTGGAGATACGGCAATTATTTGTATCTGATTCCGAACCTAGTTACTTCATGCAGTATTGCTGCCATTGGCTTCTCCCAGCTCTAGTTTTGCATGGGGATAGCTCTAGTCTCAGCTGGGTTGCTAGAATTGCTTGTCAACCTTCAGCAGTTCTGGTGAAAAATCACTTCGTGCAGATCTTCTCTGTTTGTATGGGATTGTTGCATTGTAGTAAGAGATCTGGGAGGGAAAAGGGAGCAGATGTGCTTCAGAATTCTATTTTGCATCTTGCTCAGATATCTGAGAATGAACGGGACAAACTCATCAAGAAGCATATGGTTTGCTACTTATTCTTTAGATTCATTTATCTAGGTCTGAAGTTTGATTGCAGTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko01524 ko03440 ko04064 ko04068 ko04110 ko04115 ko04210 ko04214 ko04218 ko05165 ko05166 ko05202 ko05206 map01524 map03440 map04064 map04068 map04110 map04115 map04210 map04214 map04218 map05165 map05166 map05202 map05206

Pfam Domains

Protein Families

FAT FATC PI3_PI4_kinase PWWP

Protein Analysis

1015

Amino Acids

114.13

Weight (kDa)

6.25

Isoelectric Point (pI)

40.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_ATM	PF25360	898 - 998	7.1e-45	ATM-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002934)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48190 AT3G48190 AT3G48190
fragaria_vesca	FvH4_2g11670
malus_domestica	MD06G1173700.v1.1
prunus_persica	Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1
pyrus_communis	pycom05g15080 pycom06g15490 pycom16g13670
rosa_chinensis	RchiOBHm_Chr6g0271131
rosa_laevigata	RLG00000013743
rosa_multiflora	Rmu_sc0004675.1_g000002
rosa_roxburghii	Rroxscaffold_3G00233860 Rroxscaffold_4G00324410 Rroxscaffold_4G00324420 Rroxscaffold_5G00346090 Rroxscaffold_5G00348130 Rroxscaffold_5G00348580 Rroxscaffold_5G00348590 Rroxscaffold_5G00385810 Rroxscaffold_6G00394020 Rroxscaffold_7G00197250 Rroxscaffold_8G00436820
rosa_rugosa	Rorug06G0058900
rosa_samantha	Rh6AG178600 Rh6BG182100 Rh6CG177800 Rh6DG169700
rosa_wichuraiana	Rw6G015260 Rw6G015300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2586
AccB1I	GGYRCC	1 cut(s)	1508
AccI	GTMKAC	1 cut(s)	1468
AccIII	TCCGGA	1 cut(s)	502
AciI	CCGC	2 cut(s)	514, 2114
AclI	AACGTT	1 cut(s)	1588
AclWI	GGATC	7 cut(s)	500, 513, 1854, 2237, 2288, 2522, 2632
AcsI	RAATTY	4 cut(s)	411, 1176, 1912, 2923
AcuI	CTGAAG	3 cut(s)	2799, 2903, 3047
AdeI	CACNNNGTG	1 cut(s)	2842
AfiI	CCNNNNNNNGG	3 cut(s)	589, 2201, 2302
AflII	CTTAAG	1 cut(s)	1967
AflIII	ACRYGT	2 cut(s)	680, 2149
AjiI	CACGTC	1 cut(s)	2150
AjnI	CCWGG	6 cut(s)	116, 645, 1078, 1133, 1365, 2268
AjuI	GAANNNNNNNTTGG	2 cut(s)	2471, 2503
Alw21I	GWGCWC	3 cut(s)	645, 1023, 1189
Alw26I	GTCTC	4 cut(s)	792, 1163, 1315, 2786
AlwI	GGATC	7 cut(s)	500, 513, 1854, 2237, 2288, 2522, 2632
AlwNI	CAGNNNCTG	2 cut(s)	194, 2212
Aor13HI	TCCGGA	1 cut(s)	502
ApoI	RAATTY	4 cut(s)	411, 1176, 1912, 2923
AspS9I	GGNCC	5 cut(s)	706, 1076, 1899, 2081, 2411
AsuHPI	GGTGA	4 cut(s)	800, 1354, 2084, 2839
AvaII	GGWCC	5 cut(s)	706, 1076, 1899, 2081, 2411
AxyI	CCTNAGG	2 cut(s)	693, 710
BaeGI	GKGCMC	1 cut(s)	117
BamHI	GGATCC	1 cut(s)	505
BanI	GGYRCC	1 cut(s)	1508
BanII	GRGCYC	1 cut(s)	1189
Bbv12I	GWGCWC	3 cut(s)	645, 1023, 1189
BbvCI	CCTCAGC	1 cut(s)	2421
BceAI	ACGGC	3 cut(s)	715, 1142, 2699
BciT130I	CCWGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
BciVI	GTATCC	4 cut(s)	109, 1675, 1690, 2374
BcoDI	GTCTC	4 cut(s)	792, 1163, 1315, 2786
BfmI	CTRYAG	4 cut(s)	473, 618, 900, 1743
BfrI	CTTAAG	1 cut(s)	1967
BfuAI	ACCTGC	1 cut(s)	2586
BfuI	GTATCC	4 cut(s)	109, 1675, 1690, 2374
BglII	AGATCT	4 cut(s)	364, 1214, 2847, 2888
BmcAI	AGTACT	2 cut(s)	344, 2606
Bme1390I	CCNGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
Bme18I	GGWCC	5 cut(s)	706, 1076, 1899, 2081, 2411
BmgBI	CACGTC	1 cut(s)	2150
BmgT120I	GGNCC	5 cut(s)	706, 1076, 1899, 2081, 2411
BmiI	GGNNCC	5 cut(s)	470, 507, 707, 1510, 2082
BmrFI	CCNGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
BplI	GAGNNNNNCTC	4 cut(s)	148, 180, 273, 305
Bpu10I	CCTNAGC	3 cut(s)	1017, 2085, 2421
BpuEI	CTTGAG	2 cut(s)	833, 2557
Bsa29I	ATCGAT	1 cut(s)	2163
BsaBI	GATNNNNATC	1 cut(s)	1482
BsaJI	CCNNGG	9 cut(s)	116, 174, 646, 1133, 1365, 1366, 2002, 2028, 2268
BsaWI	WCCGGW	2 cut(s)	502, 1685
BsaXI	ACNNNNNCTCC	4 cut(s)	1176, 1206, 2898, 2928
Bsc4I	CCNNNNNNNGG	3 cut(s)	589, 2201, 2302
Bse1I	ACTGG	6 cut(s)	383, 958, 1572, 1725, 2045, 2144
Bse21I	CCTNAGG	2 cut(s)	693, 710
Bse8I	GATNNNNATC	1 cut(s)	1482
BseAI	TCCGGA	1 cut(s)	502
BseBI	CCWGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
BseCI	ATCGAT	1 cut(s)	2163
BseDI	CCNNGG	9 cut(s)	116, 174, 646, 1133, 1365, 1366, 2002, 2028, 2268
BseGI	GGATG	7 cut(s)	703, 1103, 1675, 1819, 1888, 2024, 2311
BseJI	GATNNNNATC	1 cut(s)	1482
BseLI	CCNNNNNNNGG	3 cut(s)	589, 2201, 2302
BseNI	ACTGG	6 cut(s)	383, 958, 1572, 1725, 2045, 2144
BseRI	GAGGAG	3 cut(s)	481, 523, 2627
BseSI	GKGCMC	1 cut(s)	117
BseYI	CCCAGC	5 cut(s)	1759, 2011, 2581, 2749, 2787
BsgI	GTGCAG	4 cut(s)	1033, 1599, 2652, 2864
BshNI	GGYRCC	1 cut(s)	1508
BshVI	ATCGAT	1 cut(s)	2163
BsiHKAI	GWGCWC	3 cut(s)	645, 1023, 1189
BsiSI	CCGG	2 cut(s)	503, 1686
BslFI	GGGAC	4 cut(s)	719, 2029, 2094, 2978
BslI	CCNNNNNNNGG	3 cut(s)	589, 2201, 2302
BsmAI	GTCTC	4 cut(s)	792, 1163, 1315, 2786
BsmFI	GGGAC	4 cut(s)	719, 2029, 2094, 2978
Bsp1286I	GDGCHC	4 cut(s)	117, 645, 1023, 1189
Bsp13I	TCCGGA	1 cut(s)	502
Bsp1407I	TGTACA	3 cut(s)	72, 395, 673
Bsp19I	CCATGG	1 cut(s)	2002
BspACI	CCGC	2 cut(s)	514, 2114
BspDI	ATCGAT	1 cut(s)	2163
BspEI	TCCGGA	1 cut(s)	502
BspHI	TCATGA	3 cut(s)	291, 2502, 3044
BspLI	GGNNCC	5 cut(s)	470, 507, 707, 1510, 2082
BspMAI	CTGCAG	3 cut(s)	477, 622, 904
BspMI	ACCTGC	1 cut(s)	2586
BspPI	GGATC	7 cut(s)	500, 513, 1854, 2237, 2288, 2522, 2632
BspT107I	GGYRCC	1 cut(s)	1508
BspTI	CTTAAG	1 cut(s)	1967
BsrGI	TGTACA	3 cut(s)	72, 395, 673
BsrI	ACTGG	6 cut(s)	383, 958, 1572, 1725, 2045, 2144
BssECI	CCNNGG	9 cut(s)	116, 174, 646, 1133, 1365, 1366, 2002, 2028, 2268
BssT1I	CCWWGG	3 cut(s)	174, 2002, 2028
Bst2UI	CCWGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
Bst4CI	ACNGT	4 cut(s)	557, 1054, 1360, 2440
Bst6I	CTCTTC	3 cut(s)	490, 1557, 1744
BstAFI	CTTAAG	1 cut(s)	1967
BstAUI	TGTACA	3 cut(s)	72, 395, 673
BstC8I	GCNNGC	7 cut(s)	186, 438, 473, 900, 1158, 1417, 2593
BstDSI	CCRYGG	1 cut(s)	2002
BstENI	CCTNNNNNAGG	1 cut(s)	587
BstF5I	GGATG	7 cut(s)	703, 1103, 1675, 1819, 1888, 2024, 2311
BstMAI	GTCTC	4 cut(s)	792, 1163, 1315, 2786
BstMWI	GCNNNNNNNGC	7 cut(s)	520, 911, 920, 992, 1135, 2592, 2801
BstNI	CCWGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
BstNSI	RCATGY	4 cut(s)	266, 440, 684, 1602
BstSCI	CCNGG	6 cut(s)	116, 645, 1078, 1133, 1365, 2268
BstSFI	CTRYAG	4 cut(s)	473, 618, 900, 1743
BstSLI	GKGCMC	1 cut(s)	117
BstX2I	RGATCY	6 cut(s)	364, 505, 1214, 2242, 2847, 2888
BstYI	RGATCY	6 cut(s)	364, 505, 1214, 2242, 2847, 2888
Bsu15I	ATCGAT	1 cut(s)	2163
Bsu36I	CCTNAGG	2 cut(s)	693, 710
BsuI	GTATCC	4 cut(s)	109, 1675, 1690, 2374
BsuTUI	ATCGAT	1 cut(s)	2163
BtgI	CCRYGG	1 cut(s)	2002
BtgZI	GCGATG	1 cut(s)	1559
BtrI	CACGTC	1 cut(s)	2150
BtsCI	GGATG	7 cut(s)	703, 1103, 1675, 1819, 1888, 2024, 2311
BtsI	GCAGTG	1 cut(s)	1151
BtsIMutI	CAGTG	9 cut(s)	461, 741, 951, 1050, 1151, 1579, 1732, 2058, 2210
BveI	ACCTGC	1 cut(s)	2586
Cac8I	GCNNGC	7 cut(s)	186, 438, 473, 900, 1158, 1417, 2593
CaiI	CAGNNNCTG	2 cut(s)	194, 2212
CciI	TCATGA	3 cut(s)	291, 2502, 3044
Cfr13I	GGNCC	5 cut(s)	706, 1076, 1899, 2081, 2411
ClaI	ATCGAT	1 cut(s)	2163
DraI	TTTAAA	1 cut(s)	1237
DraIII	CACNNNGTG	1 cut(s)	2842
Eam1104I	CTCTTC	3 cut(s)	490, 1557, 1744
EarI	CTCTTC	3 cut(s)	490, 1557, 1744
Ecl136II	GAGCTC	1 cut(s)	1187
Eco130I	CCWWGG	3 cut(s)	174, 2002, 2028
Eco24I	GRGCYC	1 cut(s)	1189
Eco32I	GATATC	2 cut(s)	1770, 2949
Eco47I	GGWCC	5 cut(s)	706, 1076, 1899, 2081, 2411
Eco53kI	GAGCTC	1 cut(s)	1187
Eco57I	CTGAAG	3 cut(s)	2799, 2903, 3047
Eco81I	CCTNAGG	2 cut(s)	693, 710
EcoICRI	GAGCTC	1 cut(s)	1187
EcoNI	CCTNNNNNAGG	1 cut(s)	587
EcoO109I	RGGNCCY	2 cut(s)	706, 2081
EcoRI	GAATTC	1 cut(s)	2923
EcoRII	CCWGG	6 cut(s)	116, 645, 1078, 1133, 1365, 2268
EcoRV	GATATC	2 cut(s)	1770, 2949
EcoT14I	CCWWGG	3 cut(s)	174, 2002, 2028
EcoT22I	ATGCAT	2 cut(s)	2103, 2460
EcoT38I	GRGCYC	1 cut(s)	1189
ErhI	CCWWGG	3 cut(s)	174, 2002, 2028
FalI	AAGNNNNNCTT	6 cut(s)	1201, 1233, 1950, 1982, 2364, 2396
FaqI	GGGAC	4 cut(s)	719, 2029, 2094, 2978
FauNDI	CATATG	2 cut(s)	2171, 2985
FblI	GTMKAC	1 cut(s)	1468
FokI	GGATG	7 cut(s)	710, 1090, 1682, 1826, 1875, 2011, 2318
FriOI	GRGCYC	1 cut(s)	1189
GsaI	CCCAGC	5 cut(s)	1763, 2015, 2585, 2753, 2791
HapII	CCGG	2 cut(s)	503, 1686
HincII	GTYRAC	5 cut(s)	845, 1469, 1886, 2229, 2810
HindII	GTYRAC	5 cut(s)	845, 1469, 1886, 2229, 2810
HindIII	AAGCTT	2 cut(s)	400, 1970
HinfI	GANTC	5 cut(s)	1171, 1963, 2063, 2702, 3009
HpaII	CCGG	2 cut(s)	503, 1686
HphI	GGTGA	4 cut(s)	800, 1354, 2084, 2839
Hpy166II	GTNNAC	8 cut(s)	73, 845, 1469, 1657, 1886, 2229, 2414, 2810
Hpy8I	GTNNAC	8 cut(s)	73, 845, 1469, 1657, 1886, 2229, 2414, 2810
HpyAV	CCTTC	6 cut(s)	289, 1192, 1203, 1903, 2271, 2823
HpyCH4III	ACNGT	4 cut(s)	557, 1054, 1360, 2440
HpyCH4IV	ACGT	3 cut(s)	1588, 2149, 2300
HpyF10VI	GCNNNNNNNGC	7 cut(s)	520, 911, 920, 992, 1135, 2592, 2801
HpySE526I	ACGT	3 cut(s)	1588, 2149, 2300
Kpn2I	TCCGGA	1 cut(s)	502
MaeII	ACGT	3 cut(s)	1588, 2149, 2300
MaeIII	GTNAC	7 cut(s)	3, 613, 761, 1354, 1360, 2383, 2714
MboII	GAAGA	6 cut(s)	477, 1574, 1731, 2096, 2123, 2842
MfeI	CAATTG	3 cut(s)	108, 663, 1024
MflI	RGATCY	6 cut(s)	364, 505, 1214, 2242, 2847, 2888
MhlI	GDGCHC	4 cut(s)	117, 645, 1023, 1189
MlyI	GAGTC	3 cut(s)	1165, 1972, 2057
MmeI	TCCRAC	2 cut(s)	2364, 2469
Mph1103I	ATGCAT	2 cut(s)	2103, 2460
MroI	TCCGGA	1 cut(s)	502
MslI	CAYNNNNRTG	3 cut(s)	441, 681, 1491
MspA1I	CMGCKG	4 cut(s)	191, 905, 2581, 2787
MspCI	CTTAAG	1 cut(s)	1967
MspI	CCGG	2 cut(s)	503, 1686
MspR9I	CCNGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
MunI	CAATTG	3 cut(s)	108, 663, 1024
MvaI	CCWGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
MwoI	GCNNNNNNNGC	7 cut(s)	520, 911, 920, 992, 1135, 2592, 2801
NcoI	CCATGG	1 cut(s)	2002
NdeI	CATATG	2 cut(s)	2171, 2985
NlaIV	GGNNCC	5 cut(s)	470, 507, 707, 1510, 2082
NmuCI	GTSAC	1 cut(s)	1360
NsiI	ATGCAT	2 cut(s)	2103, 2460
NspI	RCATGY	4 cut(s)	266, 440, 684, 1602
PaeI	GCATGC	1 cut(s)	440
PagI	TCATGA	3 cut(s)	291, 2502, 3044
PasI	CCCWGGG	1 cut(s)	1366
PciI	ACATGT	1 cut(s)	680
PfeI	GAWTC	2 cut(s)	2702, 3009
PleI	GAGTC	3 cut(s)	1165, 1971, 2057
PpsI	GAGTC	3 cut(s)	1165, 1971, 2057
PpuMI	RGGWCCY	2 cut(s)	706, 2081
PscI	ACATGT	1 cut(s)	680
Psp124BI	GAGCTC	1 cut(s)	1189
Psp1406I	AACGTT	1 cut(s)	1588
Psp5II	RGGWCCY	2 cut(s)	706, 2081
Psp6I	CCWGG	6 cut(s)	116, 645, 1078, 1133, 1365, 2268
PspFI	CCCAGC	5 cut(s)	1759, 2011, 2581, 2749, 2787
PspGI	CCWGG	6 cut(s)	116, 645, 1078, 1133, 1365, 2268
PspN4I	GGNNCC	5 cut(s)	470, 507, 707, 1510, 2082
PspPI	GGNCC	5 cut(s)	706, 1076, 1899, 2081, 2411
PspPPI	RGGWCCY	2 cut(s)	706, 2081
PstI	CTGCAG	3 cut(s)	477, 622, 904
PstNI	CAGNNNCTG	2 cut(s)	194, 2212
PsuI	RGATCY	6 cut(s)	364, 505, 1214, 2242, 2847, 2888
PvuII	CAGCTG	4 cut(s)	191, 905, 2581, 2787
RseI	CAYNNNNRTG	3 cut(s)	441, 681, 1491
SacI	GAGCTC	1 cut(s)	1189
SalI	GTCGAC	1 cut(s)	1467
Sau96I	GGNCC	5 cut(s)	706, 1076, 1899, 2081, 2411
SbfI	CCTGCAGG	1 cut(s)	477
ScaI	AGTACT	2 cut(s)	344, 2606
SchI	GAGTC	3 cut(s)	1165, 1972, 2057
ScrFI	CCNGG	6 cut(s)	118, 647, 1080, 1135, 1367, 2270
SdaI	CCTGCAGG	1 cut(s)	477
SduI	GDGCHC	4 cut(s)	117, 645, 1023, 1189
SfcI	CTRYAG	4 cut(s)	473, 618, 900, 1743
SinI	GGWCC	5 cut(s)	706, 1076, 1899, 2081, 2411
SmiMI	CAYNNNNRTG	3 cut(s)	441, 681, 1491
SmlI	CTYRAG	3 cut(s)	848, 1967, 2572
SmoI	CTYRAG	3 cut(s)	848, 1967, 2572
SphI	GCATGC	1 cut(s)	440
Sse8387I	CCTGCAGG	1 cut(s)	477
SsiI	CCGC	2 cut(s)	514, 2114
SspI	AATATT	1 cut(s)	1619
SstI	GAGCTC	1 cut(s)	1189
StyD4I	CCNGG	6 cut(s)	116, 645, 1078, 1133, 1365, 2268
StyI	CCWWGG	3 cut(s)	174, 2002, 2028
TaaI	ACNGT	4 cut(s)	557, 1054, 1360, 2440
TaiI	ACGT	3 cut(s)	1591, 2152, 2303
TaqI	TCGA	9 cut(s)	384, 796, 1044, 1324, 1468, 1491, 2107, 2163, 2254
TatI	WGTACW	8 cut(s)	72, 196, 342, 375, 395, 673, 747, 2604
TfiI	GAWTC	2 cut(s)	2702, 3009
TscAI	CASTG	9 cut(s)	468, 741, 958, 1057, 1158, 1579, 1732, 2065, 2217
TseFI	GTSAC	1 cut(s)	1360
Tsp45I	GTSAC	1 cut(s)	1360
TspDTI	ATGAA	9 cut(s)	308, 309, 1290, 1575, 2491, 2710, 2973, 3001, 3033
TspRI	CASTG	9 cut(s)	468, 741, 958, 1057, 1158, 1579, 1732, 2065, 2217
Vha464I	CTTAAG	1 cut(s)	1967
VpaK11BI	GGWCC	5 cut(s)	706, 1076, 1899, 2081, 2411
XagI	CCTNNNNNAGG	1 cut(s)	587
XapI	RAATTY	4 cut(s)	411, 1176, 1912, 2923
XbaI	TCTAGA	1 cut(s)	979
XceI	RCATGY	4 cut(s)	266, 440, 684, 1602
XmiI	GTMKAC	1 cut(s)	1468
ZrmI	AGTACT	2 cut(s)	344, 2606
Zsp2I	ATGCAT	2 cut(s)	2103, 2460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.