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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48190 AT3G48190 AT3G48190 |
| fragaria_vesca | FvH4_2g11670 |
| malus_domestica | MD06G1173700.v1.1 |
| prunus_persica | Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 |
| pyrus_communis | pycom05g15080 pycom06g15490 pycom16g13670 |
| rosa_chinensis | RchiOBHm_Chr6g0271131 |
| rosa_laevigata | RLG00000013743 |
| rosa_multiflora | Rmu_sc0004675.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00233860 Rroxscaffold_4G00324410 Rroxscaffold_4G00324420 Rroxscaffold_5G00346090 Rroxscaffold_5G00348130 Rroxscaffold_5G00348580 Rroxscaffold_5G00348590 Rroxscaffold_5G00385810 Rroxscaffold_6G00394020 Rroxscaffold_7G00197250 Rroxscaffold_8G00436820 |
| rosa_rugosa | Rorug06G0058900 |
| rosa_samantha | Rh6AG178600 Rh6BG182100 Rh6CG177800 Rh6DG169700 |
| rosa_wichuraiana | Rw6G015260 Rw6G015300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 229 |
| AccIII | TCCGGA | 1 cut(s) | 123 |
| AclWI | GGATC | 2 cut(s) | 115, 128 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 185, 186 |
| AflIII | ACRYGT | 1 cut(s) | 224 |
| AgsI | TTSAA | 1 cut(s) | 16 |
| AluBI | AGCT | 1 cut(s) | 30 |
| AluI | AGCT | 1 cut(s) | 30 |
| AlwI | GGATC | 2 cut(s) | 115, 128 |
| Aor13HI | TCCGGA | 1 cut(s) | 123 |
| AoxI | GGCC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 136 |
| BamHI | GGATCC | 1 cut(s) | 120 |
| BccI | CCATC | 1 cut(s) | 78 |
| BfmI | CTRYAG | 1 cut(s) | 25 |
| BmgT120I | GGNCC | 1 cut(s) | 136 |
| BmiI | GGNNCC | 2 cut(s) | 122, 138 |
| BmsI | GCATC | 1 cut(s) | 208 |
| BpuEI | CTTGAG | 1 cut(s) | 126 |
| BsaWI | WCCGGW | 1 cut(s) | 123 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 185, 186 |
| BseAI | TCCGGA | 1 cut(s) | 123 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 185, 186 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BsiSI | CCGG | 1 cut(s) | 124 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 185, 186 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp13I | TCCGGA | 1 cut(s) | 123 |
| Bsp143I | GATC | 2 cut(s) | 115, 120 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspEI | TCCGGA | 1 cut(s) | 123 |
| BspLI | GGNNCC | 2 cut(s) | 122, 138 |
| BspPI | GGATC | 2 cut(s) | 115, 128 |
| BssMI | GATC | 2 cut(s) | 115, 120 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstDEI | CTNAG | 1 cut(s) | 42 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstKTI | GATC | 2 cut(s) | 118, 123 |
| BstMBI | GATC | 2 cut(s) | 115, 120 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 143 |
| BstNSI | RCATGY | 1 cut(s) | 228 |
| BstSFI | CTRYAG | 1 cut(s) | 25 |
| BstX2I | RGATCY | 1 cut(s) | 120 |
| BstYI | RGATCY | 1 cut(s) | 120 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| Cfr13I | GGNCC | 1 cut(s) | 136 |
| CviAII | CATG | 3 cut(s) | 37, 171, 225 |
| CviJI | RGCY | 4 cut(s) | 30, 46, 137, 146 |
| CviKI_1 | RGCY | 4 cut(s) | 30, 46, 137, 146 |
| DdeI | CTNAG | 1 cut(s) | 42 |
| DpnI | GATC | 2 cut(s) | 117, 122 |
| DpnII | GATC | 2 cut(s) | 115, 120 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| FaeI | CATG | 3 cut(s) | 40, 174, 228 |
| FaiI | YATR | 4 cut(s) | 38, 172, 192, 226 |
| FatI | CATG | 3 cut(s) | 36, 170, 224 |
| FblI | GTMKAC | 1 cut(s) | 229 |
| FokI | GGATG | 1 cut(s) | 162 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HapII | CCGG | 1 cut(s) | 124 |
| Hin1II | CATG | 3 cut(s) | 40, 174, 228 |
| HpaII | CCGG | 1 cut(s) | 124 |
| Hpy166II | GTNNAC | 1 cut(s) | 230 |
| Hpy188I | TCNGA | 3 cut(s) | 34, 120, 204 |
| Hpy188III | TCNNGA | 1 cut(s) | 124 |
| Hpy8I | GTNNAC | 1 cut(s) | 230 |
| Hpy99I | CGWCG | 1 cut(s) | 85 |
| HpyAV | CCTTC | 1 cut(s) | 97 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 143 |
| HpyF3I | CTNAG | 1 cut(s) | 42 |
| Hsp92II | CATG | 3 cut(s) | 40, 174, 228 |
| Kpn2I | TCCGGA | 1 cut(s) | 123 |
| Kzo9I | GATC | 2 cut(s) | 115, 120 |
| LpnPI | CCDG | 1 cut(s) | 137 |
| LweI | GCATC | 1 cut(s) | 208 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MalI | GATC | 2 cut(s) | 117, 122 |
| MboI | GATC | 2 cut(s) | 115, 120 |
| MboII | GAAGA | 1 cut(s) | 67 |
| MflI | RGATCY | 1 cut(s) | 120 |
| MluCI | AATT | 1 cut(s) | 11 |
| MnlI | CCTC | 3 cut(s) | 63, 100, 150 |
| MroI | TCCGGA | 1 cut(s) | 123 |
| MspI | CCGG | 1 cut(s) | 124 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 143 |
| NdeII | GATC | 2 cut(s) | 115, 120 |
| NlaIII | CATG | 3 cut(s) | 40, 174, 228 |
| NlaIV | GGNNCC | 2 cut(s) | 122, 138 |
| NspI | RCATGY | 1 cut(s) | 228 |
| PciI | ACATGT | 1 cut(s) | 224 |
| PscI | ACATGT | 1 cut(s) | 224 |
| PspN4I | GGNNCC | 2 cut(s) | 122, 138 |
| PspPI | GGNCC | 1 cut(s) | 136 |
| PsuI | RGATCY | 1 cut(s) | 120 |
| Sau3AI | GATC | 2 cut(s) | 115, 120 |
| Sau96I | GGNCC | 1 cut(s) | 136 |
| SetI | ASST | 2 cut(s) | 32, 55 |
| SfaNI | GCATC | 1 cut(s) | 208 |
| SfcI | CTRYAG | 1 cut(s) | 25 |
| SmlI | CTYRAG | 1 cut(s) | 141 |
| SmoI | CTYRAG | 1 cut(s) | 141 |
| Sse9I | AATT | 1 cut(s) | 11 |
| TaqI | TCGA | 2 cut(s) | 59, 97 |
| TasI | AATT | 1 cut(s) | 11 |
| TspDTI | ATGAA | 2 cut(s) | 116, 159 |
| XceI | RCATGY | 1 cut(s) | 228 |
| XmiI | GTMKAC | 1 cut(s) | 229 |