Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002934

Physical Location & Seq

Genomic Coordinates Reverse (-)

20884702 .. 20908306

Gene Structure 23605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00348590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGGAACAAGAAGATCAAGAAGATGATCTAGAGCTGCATATATACCCGGAGAAGAAAGACACACAGTTTTTCCGAGTCGACCCGACTCGAATCGGAAACCTCGCTGTGTTCCGCCGCCATCCGGGCCGCCTCCTCCTCCCTTTTCGCTTTCCATCAATGGTTTACAATTCCAAGGCCGATTTGATTTCTTTCTCCGGTTGGTTCTCCGTTTTCGACTACCACCGCCGCACCCCCGGTCAAGTTTTGGAGCTGCCAACATCCGATTCCCAACCATACAAGCTCCGTGAGCTAGTGACGGCGCCGCACGTCGTCGTTCGTCCGGGCCGAGCGAGGCAAGTCTTCCTCTCGGAGTGGCGGAACCCTAAGAAGGACGACGGCGTCATCGCTAGGATCCCGCTACCTCCGACGCCGGCTAAGTTGCCAAGAAGCCGCCGAAGAGCACCGGTAAGGCCACCGGATCTTCGGCACCACCTTCCTCATCCTCATCGACCCTCTCATCATCGAGAAGGACCGCGAGCAGCAGCTCACCGAGCTCGAGTTCCAAAGCAGGCCAACATCCTCGACACCTCCGCCGGCTCGCTCATTCGGCCAAGTGAAATCGGGCCGGCTTTTGACTTGGGTGCCCACCGAAACTCGAGCTCTCCTTCGAAACCTCCAGATTTGGATCTTCTCAGTGTATTGGGTAAGAGAGAATTAAAAAAACTTAATGGGGTAAGTGGGAAAAAAATCCCTAGAAATGGGAATCGGGATTTAATAGAGTTAAACACTTCCCGAGTCACTGGGAAAACTCACATCCTTAGAGTTACCCTTACAACTCTTATAAAAGAACAAGTTGAGGTCGCCCACGATATCTTTTTAGAACTAAAATCACACATCTCACCAAATGCTCATACGTTTAACATTTTCATTCATGGCTGGTGCAAGGTCAATCGGGTTGATGAGGCACACCGAACAATCCAAGAAATGAAGGGTCATGGTCGTCACCCTTGTGTTATTAGCTACTCAACCATTATCCTCTTTTATTGCCACAAGTACAACTTTGGTAAGGTCTATGAACTGTTTGATGAATTGGAAGCTCAAGGCTGCCCTCCAAATGTTGTCACTTTCACCACCGAAGAGCCGGATGGCAGAGTGACCACCGAGCTCGGTCATGGTAATTCCGTGCCACTTGTTGAGTCGAAGCGTGGAGGATTTTTGGAGCAAGAGAAAGCCAAGAACCCTTTACAATCAAGGACGATTGCTCTCTTTTCCTTTGCAATCGTGATGCCGTTTCTCGGGTCTAGCATTTTCGAGCGGCATCCCTTCGGGCAGCTGCAAACCGTGCTCTTCCGAAATTTTTTTAACTATGTCGGAAGGTGGTGGTCCGGGATCGACGATGATCTCGAGCGGTTGGACAGAGTTTTGGTTGAAAATTCAGTCTCTCGATCGACGACGTTGAAAACAAGCACTCTATGTCCAAAGCCTCGCAATCTGTTAATCGAAGATTGCAAGGGTGTTATTCTTGATTCGCTTGATTTGTGGGATGAGATTTTTTCGAGTGTTGCAGTCGTGCCATTGAGCCGTCCGGTCTCAAGGTCGAAACGAAGAAGAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

531

Amino Acids

60.49

Weight (kDa)

9.72

Isoelectric Point (pI)

54.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	292 - 323	8.1e-09	PPR repeat
PPR_2	PF13041	294 - 338	2.1e-09	PPR repeat family
PPR_2	PF13041	329 - 371	6.4e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002934)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48190 AT3G48190 AT3G48190
fragaria_vesca	FvH4_2g11670
malus_domestica	MD06G1173700.v1.1
prunus_persica	Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1 Prupe.5G173600_v2.0.a1
pyrus_communis	pycom05g15080 pycom06g15490 pycom16g13670
rosa_chinensis	RchiOBHm_Chr6g0271131
rosa_laevigata	RLG00000013743
rosa_multiflora	Rmu_sc0004675.1_g000002
rosa_roxburghii	Rroxscaffold_3G00233860 Rroxscaffold_4G00324410 Rroxscaffold_4G00324420 Rroxscaffold_5G00346090 Rroxscaffold_5G00348130 Rroxscaffold_5G00348580 Rroxscaffold_5G00348590 Rroxscaffold_5G00385810 Rroxscaffold_6G00394020 Rroxscaffold_7G00197250 Rroxscaffold_8G00436820
rosa_rugosa	Rorug06G0058900
rosa_samantha	Rh6AG178600 Rh6BG182100 Rh6CG177800 Rh6DG169700
rosa_wichuraiana	Rw6G015260 Rw6G015300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	821
AasI	GACNNNNNNGTC	1 cut(s)	377
AccB1I	GGYRCC	3 cut(s)	298, 465, 620
AccBSI	CCGCTC	2 cut(s)	1294, 1387
AccI	GTMKAC	1 cut(s)	78
AccII	CGCG	1 cut(s)	514
AclWI	GGATC	5 cut(s)	385, 398, 465, 672, 1376
AcoI	YGGCCR	1 cut(s)	587
AcsI	RAATTY	2 cut(s)	1333, 1411
AcyI	GRCGYC	3 cut(s)	299, 378, 407
AfaI	GTAC	1 cut(s)	1034
AfiI	CCNNNNNNNGG	4 cut(s)	121, 367, 737, 1274
AgeI	ACCGGT	1 cut(s)	442
AgsI	TTSAA	2 cut(s)	1409, 1438
AjiI	CACGTC	1 cut(s)	307
AjuI	GAANNNNNNNTTGG	2 cut(s)	247, 279
AleI	CACNNNNGTG	1 cut(s)	987
Alw21I	GWGCWC	5 cut(s)	442, 535, 641, 1146, 1326
Alw26I	GTCTC	2 cut(s)	1423, 1573
AlwI	GGATC	5 cut(s)	385, 398, 465, 672, 1376
Ama87I	CYCGRG	5 cut(s)	534, 634, 771, 1274, 1382
AoxI	GGCC	7 cut(s)	124, 174, 322, 449, 549, 587, 602
ApeKI	GCWGC	7 cut(s)	34, 250, 518, 521, 1083, 1309, 1312
ApoI	RAATTY	2 cut(s)	1333, 1411
AsiGI	ACCGGT	1 cut(s)	442
AspLEI	GCGC	1 cut(s)	301
AspS9I	GGNCC	5 cut(s)	124, 322, 509, 602, 1362
AsuC2I	CCSGG	5 cut(s)	47, 123, 234, 321, 1366
AsuHPI	GGTGA	4 cut(s)	518, 870, 974, 1099
AsuII	TTCGAA	1 cut(s)	647
AvaI	CYCGRG	5 cut(s)	534, 634, 771, 1274, 1382
AvaII	GGWCC	2 cut(s)	509, 1362
BaeGI	GKGCMC	1 cut(s)	625
BamHI	GGATCC	1 cut(s)	390
BanI	GGYRCC	3 cut(s)	298, 465, 620
BanII	GRGCYC	3 cut(s)	535, 641, 1146
BbsI	GAAGAC	1 cut(s)	331
Bbv12I	GWGCWC	5 cut(s)	442, 535, 641, 1146, 1326
BbvI	GCAGC	7 cut(s)	21, 237, 530, 533, 1070, 1299, 1321
BccI	CCATC	3 cut(s)	126, 160, 1118
BceAI	ACGGC	4 cut(s)	312, 391, 1252, 1545
BcnI	CCSGG	5 cut(s)	47, 123, 234, 321, 1366
BcoDI	GTCTC	2 cut(s)	1423, 1573
BfaI	CTAG	5 cut(s)	29, 290, 387, 732, 1281
BfoI	RGCGCY	1 cut(s)	302
BglI	GCCNNNNNGGC	1 cut(s)	123
Bme1390I	CCNGG	5 cut(s)	47, 123, 234, 321, 1366
Bme18I	GGWCC	2 cut(s)	509, 1362
BmeT110I	CYCGRG	5 cut(s)	534, 634, 771, 1274, 1382
BmgBI	CACGTC	1 cut(s)	307
BmgT120I	GGNCC	5 cut(s)	124, 322, 509, 602, 1362
BmiI	GGNNCC	5 cut(s)	300, 359, 392, 467, 622
BmrFI	CCNGG	5 cut(s)	47, 123, 234, 321, 1366
BmrI	ACTGGG	1 cut(s)	789
BmsI	GCATC	2 cut(s)	1254, 1306
BmuI	ACTGGG	1 cut(s)	789
BpiI	GAAGAC	1 cut(s)	331
BpmI	CTGGAG	1 cut(s)	639
Bpu14I	TTCGAA	1 cut(s)	647
BpuEI	CTTGAG	2 cut(s)	1062, 1555
BpuMI	CCSGG	5 cut(s)	47, 123, 234, 321, 1366
BsaBI	GATNNNNATC	1 cut(s)	663
BsaHI	GRCGYC	3 cut(s)	299, 378, 407
BsaI	GGTCTC	1 cut(s)	1573
BsaJI	CCNNGG	2 cut(s)	171, 232
BsaWI	WCCGGW	4 cut(s)	194, 442, 454, 1564
Bsc4I	CCNNNNNNNGG	4 cut(s)	121, 367, 737, 1274
Bse118I	RCCGGY	4 cut(s)	409, 442, 572, 604
Bse1I	ACTGG	1 cut(s)	784
Bse8I	GATNNNNATC	1 cut(s)	663
BseDI	CCNNGG	2 cut(s)	171, 232
BseGI	GGATG	8 cut(s)	118, 257, 478, 555, 792, 1129, 1297, 1528
BseJI	GATNNNNATC	1 cut(s)	663
BseLI	CCNNNNNNNGG	4 cut(s)	121, 367, 737, 1274
BseMII	CTCAG	1 cut(s)	685
BseNI	ACTGG	1 cut(s)	784
BseRI	GAGGAG	2 cut(s)	122, 125
BseSI	GKGCMC	1 cut(s)	625
BseXI	GCAGC	7 cut(s)	21, 237, 530, 533, 1070, 1299, 1321
Bsh1236I	CGCG	1 cut(s)	514
Bsh1285I	CGRYCG	1 cut(s)	1427
BshFI	GGCC	7 cut(s)	126, 176, 324, 451, 551, 589, 604
BshNI	GGYRCC	3 cut(s)	298, 465, 620
BshTI	ACCGGT	1 cut(s)	442
BsiEI	CGRYCG	1 cut(s)	1427
BsiHKAI	GWGCWC	5 cut(s)	442, 535, 641, 1146, 1326
BsiHKCI	CYCGRG	5 cut(s)	534, 634, 771, 1274, 1382
BslI	CCNNNNNNNGG	4 cut(s)	121, 367, 737, 1274
BsmAI	GTCTC	2 cut(s)	1423, 1573
BsnI	GGCC	7 cut(s)	126, 176, 324, 451, 551, 589, 604
Bso31I	GGTCTC	1 cut(s)	1573
BsoBI	CYCGRG	5 cut(s)	534, 634, 771, 1274, 1382
Bsp119I	TTCGAA	1 cut(s)	647
Bsp1286I	GDGCHC	6 cut(s)	442, 535, 625, 641, 1146, 1326
Bsp143I	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
BspANI	GGCC	7 cut(s)	126, 176, 324, 451, 551, 589, 604
BspCNI	CTCAG	1 cut(s)	684
BspFNI	CGCG	1 cut(s)	514
BspLI	GGNNCC	5 cut(s)	300, 359, 392, 467, 622
BspPI	GGATC	5 cut(s)	385, 398, 465, 672, 1376
BspQI	GCTCTTC	3 cut(s)	430, 1110, 1331
BspT104I	TTCGAA	1 cut(s)	647
BspT107I	GGYRCC	3 cut(s)	298, 465, 620
BspTNI	GGTCTC	1 cut(s)	1573
BsrBI	CCGCTC	2 cut(s)	1294, 1387
BsrFI	RCCGGY	4 cut(s)	409, 442, 572, 604
BsrI	ACTGG	1 cut(s)	784
BssAI	RCCGGY	4 cut(s)	409, 442, 572, 604
BssECI	CCNNGG	2 cut(s)	171, 232
BssMI	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
BssNI	GRCGYC	3 cut(s)	299, 378, 407
BssT1I	CCWWGG	1 cut(s)	171
Bst4CI	ACNGT	3 cut(s)	66, 1059, 1321
Bst6I	CTCTTC	4 cut(s)	430, 1110, 1331, 1582
BstACI	GRCGYC	3 cut(s)	299, 378, 407
BstAPI	GCANNNNNTGC	1 cut(s)	1321
BstBI	TTCGAA	1 cut(s)	647
BstC8I	GCNNGC	6 cut(s)	411, 516, 549, 574, 578, 606
BstDEI	CTNAG	4 cut(s)	363, 414, 671, 797
BstF5I	GGATG	8 cut(s)	118, 257, 478, 555, 792, 1129, 1297, 1528
BstFNI	CGCG	1 cut(s)	514
BstH2I	RGCGCY	1 cut(s)	302
BstHHI	GCGC	1 cut(s)	301
BstKTI	GATC	8 cut(s)	16, 28, 393, 460, 667, 1371, 1381, 1427
BstMAI	GTCTC	2 cut(s)	1423, 1573
BstMBI	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
BstMCI	CGRYCG	1 cut(s)	1427
BstMWI	GCNNNNNNNGC	5 cut(s)	123, 286, 530, 586, 1321
BstSCI	CCNGG	5 cut(s)	45, 121, 232, 319, 1364
BstSLI	GKGCMC	1 cut(s)	625
BstUI	CGCG	1 cut(s)	514
BstV1I	GCAGC	7 cut(s)	21, 237, 530, 533, 1070, 1299, 1321
BstV2I	GAAGAC	1 cut(s)	331
BstX2I	RGATCY	3 cut(s)	390, 457, 664
BstYI	RGATCY	3 cut(s)	390, 457, 664
BsuRI	GGCC	7 cut(s)	126, 176, 324, 451, 551, 589, 604
BtgZI	GCGATG	1 cut(s)	367
BtrI	CACGTC	1 cut(s)	307
BtsCI	GGATG	8 cut(s)	118, 257, 478, 555, 792, 1129, 1297, 1528
BtsIMutI	CAGTG	2 cut(s)	679, 777
Cac8I	GCNNGC	6 cut(s)	411, 516, 549, 574, 578, 606
CfoI	GCGC	1 cut(s)	301
Cfr10I	RCCGGY	4 cut(s)	409, 442, 572, 604
Cfr13I	GGNCC	5 cut(s)	124, 322, 509, 602, 1362
CseI	GACGC	2 cut(s)	367, 415
Csp6I	GTAC	1 cut(s)	1033
CspAI	ACCGGT	1 cut(s)	442
CviAII	CATG	3 cut(s)	911, 974, 1151
CviQI	GTAC	1 cut(s)	1033
DdeI	CTNAG	4 cut(s)	363, 414, 671, 797
DinI	GGCGCC	1 cut(s)	300
DpnI	GATC	8 cut(s)	15, 27, 392, 459, 666, 1370, 1380, 1426
DpnII	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
DrdI	GACNNNNNNGTC	1 cut(s)	377
DseDI	GACNNNNNNGTC	1 cut(s)	377
EaeI	YGGCCR	1 cut(s)	587
Eam1104I	CTCTTC	4 cut(s)	430, 1110, 1331, 1582
EarI	CTCTTC	4 cut(s)	430, 1110, 1331, 1582
EciI	GGCGGA	3 cut(s)	101, 370, 559
Ecl136II	GAGCTC	3 cut(s)	533, 639, 1144
Eco130I	CCWWGG	1 cut(s)	171
Eco24I	GRGCYC	3 cut(s)	535, 641, 1146
Eco31I	GGTCTC	1 cut(s)	1573
Eco32I	GATATC	1 cut(s)	850
Eco47I	GGWCC	2 cut(s)	509, 1362
Eco53kI	GAGCTC	3 cut(s)	533, 639, 1144
Eco88I	CYCGRG	5 cut(s)	534, 634, 771, 1274, 1382
EcoICRI	GAGCTC	3 cut(s)	533, 639, 1144
EcoRV	GATATC	1 cut(s)	850
EcoT14I	CCWWGG	1 cut(s)	171
EcoT38I	GRGCYC	3 cut(s)	535, 641, 1146
EgeI	GGCGCC	1 cut(s)	300
EheI	GGCGCC	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	171
FaeI	CATG	3 cut(s)	914, 977, 1154
FalI	AAGNNNNNCTT	2 cut(s)	1022, 1054
FatI	CATG	3 cut(s)	910, 973, 1150
FauI	CCCGC	1 cut(s)	402
FblI	GTMKAC	1 cut(s)	78
FokI	GGATG	8 cut(s)	105, 244, 465, 542, 779, 1136, 1284, 1535
FriOI	GRGCYC	3 cut(s)	535, 641, 1146
FspBI	CTAG	5 cut(s)	29, 290, 387, 732, 1281
GlaI	GCGC	1 cut(s)	300
GsuI	CTGGAG	1 cut(s)	639
HaeII	RGCGCY	1 cut(s)	302
HaeIII	GGCC	7 cut(s)	126, 176, 324, 451, 551, 589, 604
HgaI	GACGC	2 cut(s)	367, 415
HhaI	GCGC	1 cut(s)	301
Hin1I	GRCGYC	3 cut(s)	299, 378, 407
Hin1II	CATG	3 cut(s)	914, 977, 1154
Hin6I	GCGC	1 cut(s)	299
HinP1I	GCGC	1 cut(s)	299
HincII	GTYRAC	1 cut(s)	79
HindII	GTYRAC	1 cut(s)	79
HinfI	GANTC	8 cut(s)	75, 85, 90, 263, 742, 774, 1175, 1505
HphI	GGTGA	4 cut(s)	518, 870, 974, 1099
Hpy166II	GTNNAC	2 cut(s)	79, 163
Hpy188I	TCNGA	7 cut(s)	74, 95, 262, 349, 405, 1331, 1352
Hpy8I	GTNNAC	2 cut(s)	79, 163
Hpy99I	CGWCG	7 cut(s)	311, 314, 377, 409, 1376, 1432, 1435
HpyAV	CCTTC	7 cut(s)	361, 482, 500, 654, 961, 1312, 1347
HpyCH4III	ACNGT	3 cut(s)	66, 1059, 1321
HpyCH4IV	ACGT	3 cut(s)	306, 893, 1433
HpyCH4V	TGCA	6 cut(s)	37, 921, 1256, 1315, 1488, 1544
HpyF10VI	GCNNNNNNNGC	5 cut(s)	123, 286, 530, 586, 1321
HpyF3I	CTNAG	4 cut(s)	363, 414, 671, 797
HpySE526I	ACGT	3 cut(s)	306, 893, 1433
Hsp92I	GRCGYC	3 cut(s)	299, 378, 407
Hsp92II	CATG	3 cut(s)	914, 977, 1154
HspAI	GCGC	1 cut(s)	299
KasI	GGCGCC	1 cut(s)	298
KroI	GCCGGC	3 cut(s)	409, 572, 604
KroNI	GCCGGC	3 cut(s)	411, 574, 606
Kzo9I	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
LguI	GCTCTTC	3 cut(s)	430, 1110, 1331
LmnI	GCTCC	3 cut(s)	247, 285, 1198
Lsp1109I	GCAGC	7 cut(s)	21, 237, 530, 533, 1070, 1299, 1321
LweI	GCATC	2 cut(s)	1254, 1306
MaeI	CTAG	5 cut(s)	29, 290, 387, 732, 1281
MaeII	ACGT	3 cut(s)	306, 893, 1433
MaeIII	GTNAC	6 cut(s)	292, 775, 802, 980, 1099, 1132
MalI	GATC	8 cut(s)	15, 27, 392, 459, 666, 1370, 1380, 1426
MbiI	CCGCTC	2 cut(s)	1294, 1387
MboI	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
MflI	RGATCY	3 cut(s)	390, 457, 664
MhlI	GDGCHC	6 cut(s)	442, 535, 625, 641, 1146, 1326
MluCI	AATT	6 cut(s)	166, 692, 1067, 1156, 1333, 1411
Mly113I	GGCGCC	1 cut(s)	299
MlyI	GAGTC	4 cut(s)	79, 84, 783, 1184
MmeI	TCCRAC	3 cut(s)	428, 1330, 1371
MroNI	GCCGGC	3 cut(s)	409, 572, 604
MseI	TTAA	7 cut(s)	695, 705, 752, 761, 897, 1341, 1475
MslI	CAYNNNNRTG	1 cut(s)	987
MspA1I	CMGCKG	1 cut(s)	1312
MspR9I	CCNGG	5 cut(s)	47, 123, 234, 321, 1366
MvnI	CGCG	1 cut(s)	514
MwoI	GCNNNNNNNGC	5 cut(s)	123, 286, 530, 586, 1321
NaeI	GCCGGC	3 cut(s)	411, 574, 606
NarI	GGCGCC	1 cut(s)	299
NciI	CCSGG	5 cut(s)	47, 123, 234, 321, 1366
NdeII	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
NgoMIV	GCCGGC	3 cut(s)	409, 572, 604
NlaIII	CATG	3 cut(s)	914, 977, 1154
NlaIV	GGNNCC	5 cut(s)	300, 359, 392, 467, 622
NmeAIII	GCCGAG	1 cut(s)	350
NmuCI	GTSAC	5 cut(s)	292, 775, 980, 1099, 1132
NspV	TTCGAA	1 cut(s)	647
OliI	CACNNNNGTG	1 cut(s)	987
PaeR7I	CTCGAG	3 cut(s)	534, 634, 1382
PciSI	GCTCTTC	3 cut(s)	430, 1110, 1331
PcsI	WCGNNNNNNNCGW	2 cut(s)	322, 1380
PdiI	GCCGGC	3 cut(s)	411, 574, 606
PfeI	GAWTC	4 cut(s)	90, 263, 742, 1505
PflFI	GACNNNGTC	1 cut(s)	377
PfoI	TCCNGGA	1 cut(s)	1364
PinAI	ACCGGT	1 cut(s)	442
Ple19I	CGATCG	1 cut(s)	1427
PleI	GAGTC	4 cut(s)	79, 83, 782, 1183
PluTI	GGCGCC	1 cut(s)	302
PpsI	GAGTC	4 cut(s)	79, 83, 782, 1183
PsiI	TTATAA	1 cut(s)	821
Psp124BI	GAGCTC	3 cut(s)	535, 641, 1146
PspN4I	GGNNCC	5 cut(s)	300, 359, 392, 467, 622
PspPI	GGNCC	5 cut(s)	124, 322, 509, 602, 1362
PspXI	VCTCGAGB	2 cut(s)	534, 634
PsuI	RGATCY	3 cut(s)	390, 457, 664
PsyI	GACNNNGTC	1 cut(s)	377
PvuI	CGATCG	1 cut(s)	1427
PvuII	CAGCTG	1 cut(s)	1312
RsaI	GTAC	1 cut(s)	1034
RsaNI	GTAC	1 cut(s)	1033
RseI	CAYNNNNRTG	1 cut(s)	987
SacI	GAGCTC	3 cut(s)	535, 641, 1146
SalI	GTCGAC	1 cut(s)	77
SapI	GCTCTTC	3 cut(s)	430, 1110, 1331
SaqAI	TTAA	7 cut(s)	695, 705, 752, 761, 897, 1341, 1475
Sau3AI	GATC	8 cut(s)	13, 25, 390, 457, 664, 1368, 1378, 1424
Sau96I	GGNCC	5 cut(s)	124, 322, 509, 602, 1362
SchI	GAGTC	4 cut(s)	79, 84, 783, 1184
ScrFI	CCNGG	5 cut(s)	47, 123, 234, 321, 1366
SduI	GDGCHC	6 cut(s)	442, 535, 625, 641, 1146, 1326
SfaNI	GCATC	2 cut(s)	1254, 1306
SfoI	GGCGCC	1 cut(s)	300
Sfr274I	CTCGAG	3 cut(s)	534, 634, 1382
SfuI	TTCGAA	1 cut(s)	647
SinI	GGWCC	2 cut(s)	509, 1362
SlaI	CTCGAG	3 cut(s)	534, 634, 1382
SmiMI	CAYNNNNRTG	1 cut(s)	987
SmlI	CTYRAG	5 cut(s)	534, 634, 1077, 1382, 1570
SmoI	CTYRAG	5 cut(s)	534, 634, 1077, 1382, 1570
Sse9I	AATT	6 cut(s)	166, 692, 1067, 1156, 1333, 1411
SspDI	GGCGCC	1 cut(s)	298
SspMI	CTAG	5 cut(s)	29, 290, 387, 732, 1281
SstI	GAGCTC	3 cut(s)	535, 641, 1146
StyD4I	CCNGG	5 cut(s)	45, 121, 232, 319, 1364
StyI	CCWWGG	1 cut(s)	171
TaaI	ACNGT	3 cut(s)	66, 1059, 1321
TaiI	ACGT	3 cut(s)	309, 896, 1436
TaqII	GACCGA	1 cut(s)	1136
TasI	AATT	6 cut(s)	166, 692, 1067, 1156, 1333, 1411
TatI	WGTACW	1 cut(s)	1032
TauI	GCSGC	6 cut(s)	117, 129, 228, 304, 432, 1297
TfiI	GAWTC	4 cut(s)	90, 263, 742, 1505
Tru1I	TTAA	7 cut(s)	695, 705, 752, 761, 897, 1341, 1475
Tru9I	TTAA	7 cut(s)	695, 705, 752, 761, 897, 1341, 1475
TscAI	CASTG	2 cut(s)	679, 784
TseFI	GTSAC	5 cut(s)	292, 775, 980, 1099, 1132
TseI	GCWGC	7 cut(s)	34, 250, 518, 521, 1083, 1309, 1312
Tsp45I	GTSAC	5 cut(s)	292, 775, 980, 1099, 1132
TspDTI	ATGAA	5 cut(s)	895, 899, 980, 1068, 1080
TspGWI	ACGGA	3 cut(s)	196, 272, 1150
TspRI	CASTG	2 cut(s)	679, 784
Tth111I	GACNNNGTC	1 cut(s)	377
VpaK11BI	GGWCC	2 cut(s)	509, 1362
XapI	RAATTY	2 cut(s)	1333, 1411
XbaI	TCTAGA	1 cut(s)	28
XhoI	CTCGAG	3 cut(s)	534, 634, 1382
XmiI	GTMKAC	1 cut(s)	78
XspI	CTAG	5 cut(s)	29, 290, 387, 732, 1281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.