Rorug06G0058900

Reversible hydration of carbon dioxide

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
7914320 .. 7934536
20217 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0058900.1

Sequence Viewer

Length: 1935 bp
ATGGAAGGCGTGGATAAAGAGAAGCGCAAGGAGACTTTGATTAAGGAGAAGATAGAGAACATGCGTGCTCGGTGTGTGAAGCTCACCGCCGCAGATTTGGCTCACTATCAGAAGGTTGCTGATAAGAGAGTTGTGGAGTTAGAAGCAACGCGTGACCTGTTGAGGGTTTGGATACATGTGGATATGGATGCTTTCTATGCAGCTGTTGAGACTTTGAGTGACCCGTCGTTGAAGGGAAAGCCCATGGCTGTTGGTGGTATGTCTATGATCTCAACTGCTAATTATGAGGCAAGGAGATTTGGGGTTCGAGCTGCAATGCCTGGCTTCATTGCTCGTAAATTATGTCTGGAGTTAATTTTTGTTCCAACAGATTTCAAGAAGTACACTTATTACAGTGATTTAACTAGAAAAGTGTTTCGGAAGTATGATCCTAACTTCCTGACTGCTAGTTTAGACGAAGCGTACCTTGATGTTACTGAGGTTTGCAAAGAAAAGGGCACTACTGGGGAAGAAATTGCCAAAGAACTCAGAGATGGTGTTTATGAAGAGACTGGTCTAACATGTAGCGCTGGGGTAGCACCAAACCGTCTACTTGCTAAGGTTTGCTCAGATATAAACAAGCCGAATGGACAGTTTATTTTACCAAGCAATCGAATGGCTGTGATGACATTTATATCCTCACTTCCTGTACGAAAGATTGGGGGGATTGGAAAAGTCACTGAACATATTTTAAGGGATGCTATTGGAATTAGTACTTGCGAGGAGATTCTGCAAAAGAGCAGTTATATCTGTGCACTATTTTCTCATTCTACGGCAGATTTTTTCCTCTCTGTGGGACTTGCCATCGGGAGGACAGATACTCCTGAAGTCAGATTGAGGAAAAGTATAAGTAACGAGAGGACATTTTCAGCCACAGGGGATGAAGCATTTCTCTATCGTAAATTAGCTGAGATCGCAGAGATGCTATCTACTGACTTGCAAAAGGAAGGCCTTTTTGGGCGTACATTGACTCTTAAACTCAAAACTGCATCTTTTGAGGTTCGCACCAGAGCTGTGACTTCTCAAAAATATGTATGCTCGACTGAGGATATATTGAAGCATGCTTCAAAGTTGCTTAAAGCTGAACTTCCTGTTTCTATAAGGCTGATAGGTTTGCGGGTGTCTCATTTTGATGAAGAAAAGGGTGCTCCATCTGATCCCACACAAAAATCTCTCACCGACTATCTTTTATCAGGAGATGCTTCAAGGAAAACTATGGGTGATCAAATCTCCTTGGACTCGGACAATATTGGTCATCGCTTGATACACGGTGAAGAATCCTGTTTACTTATAGAAACCCATGAAACATATCCATGTGATCATGGAGATCCTTTAGATGGCAATGCTTGTTCAAATGCTGATGACCGTAAGTCTATTTTGGTCAACACTTCTGAAGAAAAGGAAAAACATGATGAATTCAGGAGTAATGCAAGTGCTGAAAAGATGAATTCAAAAGACATACAGACTGGGGAAAATGTACAAAACGGAGTTTCACCATTGTTGAGAGTAGGTTATTCTTTTCATGGGAACTCCGAGGGCAGTAGCATAGACAGAGCAAATAGTGTAACTAGCAGCCTTCAGGATTGTCCAATTCCTTCATCTCATCAGAAAGAGTTGCTTTTGTGGGTGGATGACTACAAGTGTTCGATATGTGGAATAGAAATGCCACCAGATTTTGTTGAAGAACGGCAAGAACACTTTGATTTTCATCTTGCCGAGAAGCTTCAAAACGATGAATCTGGCATTAACCTGAGAACTTCCATGCCAAAGCAGAGAAATGTAAACAAGGATCAGGATTTGAGCAGAAGGAAACACAAAAAGCATAAATCATCTCCAAAAGAAATCAAACACATACCTATTGATGTGTTCTTTGTTAAGAGCTGTCAGAACTTCTAA

Protein Analysis

644

Amino Acids

72.18

Weight (kDa)

6.45

Isoelectric Point (pI)

39.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 60 - 204 1.5e-48 impB/mucB/samB family
IMS_C PF11799 293 - 396 3.8e-21 impB/mucB/samB family C-terminal domain
zf_UBZ PF18439 557 - 590 2.6e-07 Ubiquitin-Binding Zinc Finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 589
AccII CGCG 1 cut(s) 151
AciI CCGC 3 cut(s) 87, 90, 1156
AclWI GGATC 4 cut(s) 422, 1190, 1361, 1836
AcsI RAATTY 2 cut(s) 1454, 1486
AcuI CTGAAG 3 cut(s) 885, 1452, 1601
AfaI GTAC 6 cut(s) 383, 464, 690, 754, 1003, 1518
AfeI AGCGCT 1 cut(s) 568
AfiI CCNNNNNNNGG 4 cut(s) 163, 832, 849, 1376
AflIII ACRYGT 3 cut(s) 149, 175, 560
AgsI TTSAA 9 cut(s) 232, 376, 1096, 1107, 1245, 1392, 1491, 1721, 1766
AhdI GACNNNNNGTC 1 cut(s) 1408
AjnI CCWGG 1 cut(s) 319
AjuI GAANNNNNNNTTGG 2 cut(s) 978, 1010
AluBI AGCT 8 cut(s) 82, 203, 311, 947, 1052, 1121, 1762, 1920
AluI AGCT 8 cut(s) 82, 203, 311, 947, 1052, 1121, 1762, 1920
Alw21I GWGCWC 3 cut(s) 70, 796, 1189
Alw26I GTCTC 4 cut(s) 26, 203, 542, 1167
Alw44I GTGCAC 1 cut(s) 792
AlwI GGATC 4 cut(s) 422, 1190, 1361, 1836
Aor51HI AGCGCT 1 cut(s) 568
AoxI GGCC 1 cut(s) 988
ApaLI GTGCAC 1 cut(s) 792
ApeKI GCWGC 3 cut(s) 200, 311, 1611
ApoI RAATTY 2 cut(s) 1454, 1486
Asp700I GAANNNNTTC 1 cut(s) 927
AspLEI GCGC 2 cut(s) 27, 569
AsuHPI GGTGA 5 cut(s) 76, 1207, 1271, 1322, 1524
BaeGI GKGCMC 2 cut(s) 500, 796
Bbv12I GWGCWC 3 cut(s) 70, 796, 1189
BbvI GCAGC 3 cut(s) 212, 298, 1623
BccI CCATC 4 cut(s) 527, 851, 1198, 1370
BceAI ACGGC 2 cut(s) 828, 1742
BciT130I CCWGG 1 cut(s) 321
BciVI GTATCC 1 cut(s) 165
BclI TGATCA 2 cut(s) 1261, 1357
BcoDI GTCTC 4 cut(s) 26, 203, 542, 1167
BfaI CTAG 3 cut(s) 405, 447, 1608
BfoI RGCGCY 1 cut(s) 570
BfuI GTATCC 1 cut(s) 165
BisI GCNGC 4 cut(s) 90, 201, 312, 1612
BlsI GCNGC 4 cut(s) 91, 202, 313, 1613
BmcAI AGTACT 1 cut(s) 754
Bme1390I CCNGG 1 cut(s) 321
BmeRI GACNNNNNGTC 1 cut(s) 1408
BmrFI CCNGG 1 cut(s) 321
BmrI ACTGGG 2 cut(s) 513, 1515
BmsI GCATC 5 cut(s) 178, 727, 951, 1037, 1228
BmuI ACTGGG 2 cut(s) 513, 1515
BpmI CTGGAG 1 cut(s) 368
Bpu10I CCTNAGC 1 cut(s) 597
BsaBI GATNNNNATC 1 cut(s) 1746
BsaJI CCNNGG 3 cut(s) 243, 1272, 1572
BsaXI ACNNNNNCTCC 2 cut(s) 844, 874
Bsc4I CCNNNNNNNGG 4 cut(s) 163, 832, 849, 1376
Bse1I ACTGG 3 cut(s) 508, 556, 1510
Bse3DI GCAATG 3 cut(s) 321, 327, 1387
Bse8I GATNNNNATC 1 cut(s) 1746
BseBI CCWGG 1 cut(s) 321
BseDI CCNNGG 3 cut(s) 243, 1272, 1572
BseGI GGATG 4 cut(s) 193, 742, 925, 1675
BseJI GATNNNNATC 1 cut(s) 1746
BseLI CCNNNNNNNGG 4 cut(s) 163, 832, 849, 1376
BseMI GCAATG 3 cut(s) 321, 327, 1387
BseMII CTCAG 6 cut(s) 468, 541, 621, 939, 1074, 1781
BseNI ACTGG 3 cut(s) 508, 556, 1510
BseRI GAGGAG 1 cut(s) 776
BseSI GKGCMC 2 cut(s) 500, 796
BseXI GCAGC 3 cut(s) 212, 298, 1623
BseYI CCCAGC 1 cut(s) 569
Bsh1236I CGCG 1 cut(s) 151
BshFI GGCC 1 cut(s) 990
BsiHKAI GWGCWC 3 cut(s) 70, 796, 1189
BslFI GGGAC 1 cut(s) 849
BslI CCNNNNNNNGG 4 cut(s) 163, 832, 849, 1376
BsmAI GTCTC 4 cut(s) 26, 203, 542, 1167
BsmFI GGGAC 1 cut(s) 849
BsnI GGCC 1 cut(s) 990
Bsp1286I GDGCHC 4 cut(s) 70, 500, 796, 1189
Bsp1407I TGTACA 1 cut(s) 1516
Bsp143I GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 3 cut(s) 87, 90, 1156
BspANI GGCC 1 cut(s) 990
BspCNI CTCAG 6 cut(s) 469, 540, 620, 940, 1075, 1782
BspFNI CGCG 1 cut(s) 151
BspPI GGATC 4 cut(s) 422, 1190, 1361, 1836
BsrDI GCAATG 3 cut(s) 321, 327, 1387
BsrGI TGTACA 1 cut(s) 1516
BsrI ACTGG 3 cut(s) 508, 556, 1510
BssECI CCNNGG 3 cut(s) 243, 1272, 1572
BssMI GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
BssT1I CCWWGG 2 cut(s) 243, 1272
Bst2UI CCWGG 1 cut(s) 321
Bst4CI ACNGT 5 cut(s) 395, 587, 633, 1310, 1406
Bst6I CTCTTC 1 cut(s) 540
BstAUI TGTACA 1 cut(s) 1516
BstC8I GCNNGC 2 cut(s) 66, 1101
BstDEI CTNAG 7 cut(s) 477, 527, 597, 607, 948, 1083, 1790
BstDSI CCRYGG 1 cut(s) 243
BstF5I GGATG 4 cut(s) 193, 742, 925, 1675
BstFNI CGCG 1 cut(s) 151
BstH2I RGCGCY 1 cut(s) 570
BstHHI GCGC 2 cut(s) 27, 569
BstKTI GATC 8 cut(s) 270, 430, 954, 1198, 1264, 1360, 1369, 1831
BstMAI GTCTC 4 cut(s) 26, 203, 542, 1167
BstMBI GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
BstMWI GCNNNNNNNGC 4 cut(s) 98, 197, 575, 953
BstNI CCWGG 1 cut(s) 321
BstNSI RCATGY 4 cut(s) 64, 179, 564, 1103
BstSCI CCNGG 1 cut(s) 319
BstSLI GKGCMC 2 cut(s) 500, 796
BstUI CGCG 1 cut(s) 151
BstV1I GCAGC 3 cut(s) 212, 298, 1623
BstX2I RGATCY 1 cut(s) 1366
BstYI RGATCY 1 cut(s) 1366
BsuI GTATCC 1 cut(s) 165
BsuRI GGCC 1 cut(s) 990
BtgI CCRYGG 1 cut(s) 243
BtgZI GCGATG 1 cut(s) 1280
BtsCI GGATG 4 cut(s) 193, 742, 925, 1675
BtsIMutI CAGTG 2 cut(s) 400, 717
Cac8I GCNNGC 2 cut(s) 66, 1101
CfoI GCGC 2 cut(s) 27, 569
Csp6I GTAC 6 cut(s) 382, 463, 689, 753, 1002, 1517
CviQI GTAC 6 cut(s) 382, 463, 689, 753, 1002, 1517
DdeI CTNAG 7 cut(s) 477, 527, 597, 607, 948, 1083, 1790
DpnI GATC 8 cut(s) 269, 429, 953, 1197, 1263, 1359, 1368, 1830
DpnII GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
DriI GACNNNNNGTC 1 cut(s) 1408
Eam1104I CTCTTC 1 cut(s) 540
Eam1105I GACNNNNNGTC 1 cut(s) 1408
EarI CTCTTC 1 cut(s) 540
Eco130I CCWWGG 2 cut(s) 243, 1272
Eco147I AGGCCT 1 cut(s) 990
Eco47III AGCGCT 1 cut(s) 568
Eco57I CTGAAG 3 cut(s) 885, 1452, 1601
EcoRI GAATTC 2 cut(s) 1454, 1486
EcoRII CCWGG 1 cut(s) 319
EcoT14I CCWWGG 2 cut(s) 243, 1272
ErhI CCWWGG 2 cut(s) 243, 1272
FalI AAGNNNNNCTT 6 cut(s) 450, 482, 1110, 1142, 1641, 1673
FaqI GGGAC 1 cut(s) 849
FauI CCCGC 1 cut(s) 1149
FbaI TGATCA 2 cut(s) 1261, 1357
FblI GTMKAC 1 cut(s) 589
Fnu4HI GCNGC 4 cut(s) 90, 201, 312, 1612
FokI GGATG 4 cut(s) 200, 749, 932, 1682
Fsp4HI GCNGC 4 cut(s) 90, 201, 312, 1612
FspBI CTAG 3 cut(s) 405, 447, 1608
GlaI GCGC 2 cut(s) 26, 568
GluI GCNGC 4 cut(s) 90, 201, 312, 1612
GsaI CCCAGC 1 cut(s) 573
GsuI CTGGAG 1 cut(s) 368
HaeII RGCGCY 1 cut(s) 570
HaeIII GGCC 1 cut(s) 990
HhaI GCGC 2 cut(s) 27, 569
Hin6I GCGC 2 cut(s) 25, 567
HinP1I GCGC 2 cut(s) 25, 567
HincII GTYRAC 1 cut(s) 1423
HindII GTYRAC 1 cut(s) 1423
HindIII AAGCTT 1 cut(s) 1760
HinfI GANTC 5 cut(s) 766, 1009, 1277, 1316, 1775
HphI GGTGA 5 cut(s) 76, 1207, 1271, 1322, 1524
Hpy166II GTNNAC 6 cut(s) 384, 590, 794, 1325, 1423, 1822
Hpy188III TCNNGA 9 cut(s) 347, 376, 439, 847, 863, 1233, 1459, 1619, 1832
Hpy8I GTNNAC 6 cut(s) 384, 590, 794, 1325, 1423, 1822
Hpy99I CGWCG 1 cut(s) 229
HpyAV CCTTC 6 cut(s) 106, 226, 980, 1625, 1644, 1839
HpyCH4III ACNGT 5 cut(s) 395, 587, 633, 1310, 1406
HpyCH4V TGCA 8 cut(s) 200, 314, 486, 772, 794, 979, 1028, 1469
HpyF10VI GCNNNNNNNGC 4 cut(s) 98, 197, 575, 953
HpyF3I CTNAG 7 cut(s) 477, 527, 597, 607, 948, 1083, 1790
HspAI GCGC 2 cut(s) 25, 567
Ksp22I TGATCA 2 cut(s) 1261, 1357
Kzo9I GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
LmnI GCTCC 1 cut(s) 1192
Lsp1109I GCAGC 3 cut(s) 212, 298, 1623
LweI GCATC 5 cut(s) 178, 727, 951, 1037, 1228
MaeI CTAG 3 cut(s) 405, 447, 1608
MaeIII GTNAC 7 cut(s) 152, 218, 472, 715, 890, 1054, 1603
MalI GATC 8 cut(s) 269, 429, 953, 1197, 1263, 1359, 1368, 1830
MboI GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
MboII GAAGA 7 cut(s) 61, 521, 557, 1187, 1325, 1445, 1733
MflI RGATCY 1 cut(s) 1366
MhlI GDGCHC 4 cut(s) 70, 500, 796, 1189
MluCI AATT 9 cut(s) 280, 338, 354, 513, 747, 941, 1454, 1486, 1629
MluI ACGCGT 1 cut(s) 149
MlyI GAGTC 2 cut(s) 1003, 1271
MmeI TCCRAC 1 cut(s) 389
MroXI GAANNNNTTC 1 cut(s) 927
MseI TTAA 8 cut(s) 42, 353, 401, 731, 1014, 1116, 1785, 1914
MslI CAYNNNNRTG 2 cut(s) 1170, 1351
MspA1I CMGCKG 1 cut(s) 203
MspR9I CCNGG 1 cut(s) 321
MvaI CCWGG 1 cut(s) 321
MvnI CGCG 1 cut(s) 151
MwoI GCNNNNNNNGC 4 cut(s) 98, 197, 575, 953
NcoI CCATGG 1 cut(s) 243
NdeII GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
NmeAIII GCCGAG 1 cut(s) 1780
NmuCI GTSAC 4 cut(s) 152, 218, 715, 1054
NspI RCATGY 4 cut(s) 64, 179, 564, 1103
PaeI GCATGC 1 cut(s) 1103
PceI AGGCCT 1 cut(s) 990
PciI ACATGT 2 cut(s) 175, 560
PdmI GAANNNNTTC 1 cut(s) 927
PfeI GAWTC 3 cut(s) 766, 1316, 1775
PkrI GCNGC 4 cut(s) 91, 202, 313, 1613
PleI GAGTC 2 cut(s) 1003, 1271
PpsI GAGTC 2 cut(s) 1003, 1271
PscI ACATGT 2 cut(s) 175, 560
Psp6I CCWGG 1 cut(s) 319
PspFI CCCAGC 1 cut(s) 569
PspGI CCWGG 1 cut(s) 319
PsuI RGATCY 1 cut(s) 1366
PvuII CAGCTG 1 cut(s) 203
RsaI GTAC 6 cut(s) 383, 464, 690, 754, 1003, 1518
RsaNI GTAC 6 cut(s) 382, 463, 689, 753, 1002, 1517
RseI CAYNNNNRTG 2 cut(s) 1170, 1351
SaqAI TTAA 8 cut(s) 42, 353, 401, 731, 1014, 1116, 1785, 1914
SatI GCNGC 4 cut(s) 90, 201, 312, 1612
Sau3AI GATC 8 cut(s) 267, 427, 951, 1195, 1261, 1357, 1366, 1828
ScaI AGTACT 1 cut(s) 754
SchI GAGTC 2 cut(s) 1003, 1271
ScrFI CCNGG 1 cut(s) 321
SduI GDGCHC 4 cut(s) 70, 500, 796, 1189
SfaNI GCATC 5 cut(s) 178, 727, 951, 1037, 1228
SmiMI CAYNNNNRTG 2 cut(s) 1170, 1351
SphI GCATGC 1 cut(s) 1103
Sse9I AATT 9 cut(s) 280, 338, 354, 513, 747, 941, 1454, 1486, 1629
SseBI AGGCCT 1 cut(s) 990
SsiI CCGC 3 cut(s) 87, 90, 1156
SspI AATATT 1 cut(s) 1288
SspMI CTAG 3 cut(s) 405, 447, 1608
StuI AGGCCT 1 cut(s) 990
StyD4I CCNGG 1 cut(s) 319
StyI CCWWGG 2 cut(s) 243, 1272
TaaI ACNGT 5 cut(s) 395, 587, 633, 1310, 1406
TaqI TCGA 4 cut(s) 307, 652, 1079, 1685
TasI AATT 9 cut(s) 280, 338, 354, 513, 747, 941, 1454, 1486, 1629
TatI WGTACW 3 cut(s) 381, 752, 1516
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 3 cut(s) 766, 1316, 1775
Tru1I TTAA 8 cut(s) 42, 353, 401, 731, 1014, 1116, 1785, 1914
Tru9I TTAA 8 cut(s) 42, 353, 401, 731, 1014, 1116, 1785, 1914
TscAI CASTG 2 cut(s) 400, 724
TseFI GTSAC 4 cut(s) 152, 218, 715, 1054
TseI GCWGC 3 cut(s) 200, 311, 1611
Tsp45I GTSAC 4 cut(s) 152, 218, 715, 1054
TspGWI ACGGA 1 cut(s) 1539
TspRI CASTG 2 cut(s) 400, 724
VneI GTGCAC 1 cut(s) 792
XapI RAATTY 2 cut(s) 1454, 1486
XceI RCATGY 4 cut(s) 64, 179, 564, 1103
XmiI GTMKAC 1 cut(s) 589
XmnI GAANNNNTTC 1 cut(s) 927
XspI CTAG 3 cut(s) 405, 447, 1608
ZrmI AGTACT 1 cut(s) 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.