Rorug07G0300100

Reversible hydration of carbon dioxide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001103
Physical Location & Seq
Reverse (-)
29651228 .. 29651539
312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0300100.1

Sequence Viewer

Length: 312 bp
ATGATCTTCATGATTCTCTCAGGGCCAGCAGCGACACCTACCGCCGTGACCACGGTCCCCTCCACGTCAACGGCCTCAGAATCCGCGGTAGAAGCCTCCATGCTCAACAATAACGCCTCCTCCTCTTTCAGTCATGAAGTCGAGGAAGACGCCGGCTTGGATCGAACAGACGACGTCGTTTACCCAGCGGAGTGGAGTTGTTGCCTCTCGAAACTTCCAGCTTCACCATTGTTCGCCGTCGCCGCTGCCGTTGTCGTCGATGAAGGTCTCAAGGACGAAGAAGCCATCGATTTGAGAGAGAAATTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko00910 map00910
Pfam Domains
Protein Families
Pro_CA

Protein Analysis

103

Amino Acids

10.91

Weight (kDa)

4.05

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 177
AccII CGCG 1 cut(s) 86
AciI CCGC 5 cut(s) 42, 84, 86, 188, 243
AclWI GGATC 1 cut(s) 168
AcsI RAATTY 1 cut(s) 302
AcyI GRCGYC 2 cut(s) 150, 174
AjiI CACGTC 1 cut(s) 66
AluBI AGCT 1 cut(s) 221
AluI AGCT 1 cut(s) 221
Alw26I GTCTC 1 cut(s) 272
AlwI GGATC 1 cut(s) 168
AoxI GGCC 2 cut(s) 23, 72
ApeKI GCWGC 2 cut(s) 29, 245
ApoI RAATTY 1 cut(s) 302
AspS9I GGNCC 2 cut(s) 23, 55
AsuHPI GGTGA 1 cut(s) 216
AvaII GGWCC 1 cut(s) 55
BbsI GAAGAC 1 cut(s) 153
BbvI GCAGC 2 cut(s) 41, 232
BccI CCATC 1 cut(s) 293
BceAI ACGGC 4 cut(s) 29, 87, 221, 233
BcoDI GTCTC 1 cut(s) 272
BisI GCNGC 3 cut(s) 30, 243, 246
BlsI GCNGC 3 cut(s) 31, 244, 247
Bme18I GGWCC 1 cut(s) 55
BmgBI CACGTC 1 cut(s) 66
BmgT120I GGNCC 2 cut(s) 23, 55
BmiI GGNNCC 1 cut(s) 57
BoxI GACNNNNGTC 1 cut(s) 53
BpiI GAAGAC 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 254
Bsa29I ATCGAT 1 cut(s) 288
BsaHI GRCGYC 2 cut(s) 150, 174
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 2 cut(s) 51, 84
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bse118I RCCGGY 1 cut(s) 152
BseCI ATCGAT 1 cut(s) 288
BseDI CCNNGG 2 cut(s) 51, 84
BseMII CTCAG 2 cut(s) 33, 90
BseRI GAGGAG 2 cut(s) 109, 112
BseXI GCAGC 2 cut(s) 41, 232
BseYI CCCAGC 1 cut(s) 184
Bsh1236I CGCG 1 cut(s) 86
BshFI GGCC 2 cut(s) 25, 74
BshVI ATCGAT 1 cut(s) 288
BsiSI CCGG 1 cut(s) 153
BslFI GGGAC 1 cut(s) 41
BsmAI GTCTC 1 cut(s) 272
BsmFI GGGAC 1 cut(s) 41
BsnI GGCC 2 cut(s) 25, 74
Bso31I GGTCTC 1 cut(s) 272
Bsp143I GATC 2 cut(s) 3, 160
BspACI CCGC 5 cut(s) 42, 84, 86, 188, 243
BspANI GGCC 2 cut(s) 25, 74
BspCNI CTCAG 2 cut(s) 32, 89
BspDI ATCGAT 1 cut(s) 288
BspFNI CGCG 1 cut(s) 86
BspHI TCATGA 2 cut(s) 9, 133
BspLI GGNNCC 1 cut(s) 57
BspPI GGATC 1 cut(s) 168
BspTNI GGTCTC 1 cut(s) 272
BsrFI RCCGGY 1 cut(s) 152
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 2 cut(s) 51, 84
BssMI GATC 2 cut(s) 3, 160
BssNI GRCGYC 2 cut(s) 150, 174
Bst4CI ACNGT 1 cut(s) 55
BstACI GRCGYC 2 cut(s) 150, 174
BstC8I GCNNGC 2 cut(s) 27, 154
BstDEI CTNAG 2 cut(s) 19, 76
BstDSI CCRYGG 2 cut(s) 51, 84
BstFNI CGCG 1 cut(s) 86
BstKTI GATC 2 cut(s) 6, 163
BstMAI GTCTC 1 cut(s) 272
BstMBI GATC 2 cut(s) 3, 160
BstMWI GCNNNNNNNGC 2 cut(s) 92, 242
BstPAI GACNNNNGTC 1 cut(s) 53
BstUI CGCG 1 cut(s) 86
BstV1I GCAGC 2 cut(s) 41, 232
BstV2I GAAGAC 1 cut(s) 153
BstXI CCANNNNNNTGG 1 cut(s) 192
Bsu15I ATCGAT 1 cut(s) 288
BsuRI GGCC 2 cut(s) 25, 74
BsuTUI ATCGAT 1 cut(s) 288
BtgI CCRYGG 2 cut(s) 51, 84
BtrI CACGTC 1 cut(s) 66
Cac8I GCNNGC 2 cut(s) 27, 154
CciI TCATGA 2 cut(s) 9, 133
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 2 cut(s) 23, 55
Cfr42I CCGCGG 1 cut(s) 87
ClaI ATCGAT 1 cut(s) 288
CseI GACGC 1 cut(s) 158
CviAII CATG 3 cut(s) 10, 100, 134
CviJI RGCY 6 cut(s) 25, 74, 95, 156, 221, 284
CviKI_1 RGCY 6 cut(s) 25, 74, 95, 156, 221, 284
DdeI CTNAG 2 cut(s) 19, 76
DpnI GATC 2 cut(s) 5, 162
DpnII GATC 2 cut(s) 3, 160
Eco31I GGTCTC 1 cut(s) 272
Eco47I GGWCC 1 cut(s) 55
FaeI CATG 3 cut(s) 13, 103, 137
FaiI YATR 3 cut(s) 11, 101, 135
FaqI GGGAC 1 cut(s) 41
FatI CATG 3 cut(s) 9, 99, 133
Fnu4HI GCNGC 3 cut(s) 30, 243, 246
Fsp4HI GCNGC 3 cut(s) 30, 243, 246
GluI GCNGC 3 cut(s) 30, 243, 246
GsaI CCCAGC 1 cut(s) 188
HaeIII GGCC 2 cut(s) 25, 74
HapII CCGG 1 cut(s) 153
HgaI GACGC 1 cut(s) 158
Hin1I GRCGYC 2 cut(s) 150, 174
Hin1II CATG 3 cut(s) 13, 103, 137
HincII GTYRAC 1 cut(s) 69
HindII GTYRAC 1 cut(s) 69
HinfI GANTC 2 cut(s) 13, 80
HpaII CCGG 1 cut(s) 153
HphI GGTGA 1 cut(s) 216
Hpy166II GTNNAC 2 cut(s) 69, 181
Hpy188I TCNGA 1 cut(s) 79
Hpy188III TCNNGA 3 cut(s) 10, 134, 208
Hpy8I GTNNAC 2 cut(s) 69, 181
Hpy99I CGWCG 4 cut(s) 176, 179, 242, 260
HpyAV CCTTC 1 cut(s) 257
HpyCH4III ACNGT 1 cut(s) 55
HpyCH4IV ACGT 2 cut(s) 65, 174
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 242
HpyF3I CTNAG 2 cut(s) 19, 76
HpySE526I ACGT 2 cut(s) 65, 174
Hsp92I GRCGYC 2 cut(s) 150, 174
Hsp92II CATG 3 cut(s) 13, 103, 137
KroI GCCGGC 1 cut(s) 152
KroNI GCCGGC 1 cut(s) 154
KspI CCGCGG 1 cut(s) 87
Kzo9I GATC 2 cut(s) 3, 160
LpnPI CCDG 5 cut(s) 6, 39, 166, 198, 231
Lsp1109I GCAGC 2 cut(s) 41, 232
MaeII ACGT 2 cut(s) 65, 174
MaeIII GTNAC 1 cut(s) 46
MalI GATC 2 cut(s) 5, 162
MboI GATC 2 cut(s) 3, 160
MboII GAAGA 2 cut(s) 158, 290
MluCI AATT 1 cut(s) 302
MnlI CCTC 8 cut(s) 70, 85, 106, 127, 130, 133, 136, 215
MroNI GCCGGC 1 cut(s) 152
MspA1I CMGCKG 3 cut(s) 86, 188, 245
MspI CCGG 1 cut(s) 153
MvnI CGCG 1 cut(s) 86
MwoI GCNNNNNNNGC 2 cut(s) 92, 242
NaeI GCCGGC 1 cut(s) 154
NdeII GATC 2 cut(s) 3, 160
NgoMIV GCCGGC 1 cut(s) 152
NlaIII CATG 3 cut(s) 13, 103, 137
NlaIV GGNNCC 1 cut(s) 57
NmuCI GTSAC 1 cut(s) 46
PagI TCATGA 2 cut(s) 9, 133
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PdiI GCCGGC 1 cut(s) 154
PfeI GAWTC 2 cut(s) 13, 80
PflFI GACNNNGTC 1 cut(s) 173
PkrI GCNGC 3 cut(s) 31, 244, 247
PshAI GACNNNNGTC 1 cut(s) 53
PspFI CCCAGC 1 cut(s) 184
PspN4I GGNNCC 1 cut(s) 57
PspPI GGNCC 2 cut(s) 23, 55
PsyI GACNNNGTC 1 cut(s) 173
SacII CCGCGG 1 cut(s) 87
SatI GCNGC 3 cut(s) 30, 243, 246
Sau3AI GATC 2 cut(s) 3, 160
Sau96I GGNCC 2 cut(s) 23, 55
SetI ASST 5 cut(s) 40, 68, 177, 223, 268
Sfr303I CCGCGG 1 cut(s) 87
SgrBI CCGCGG 1 cut(s) 87
SinI GGWCC 1 cut(s) 55
SmlI CTYRAG 1 cut(s) 269
SmoI CTYRAG 1 cut(s) 269
Sse9I AATT 1 cut(s) 302
SsiI CCGC 5 cut(s) 42, 84, 86, 188, 243
TaaI ACNGT 1 cut(s) 55
TaiI ACGT 2 cut(s) 68, 177
TaqI TCGA 5 cut(s) 141, 163, 209, 258, 288
TasI AATT 1 cut(s) 302
TauI GCSGC 1 cut(s) 245
TfiI GAWTC 2 cut(s) 13, 80
TseFI GTSAC 1 cut(s) 46
TseI GCWGC 2 cut(s) 29, 245
Tsp45I GTSAC 1 cut(s) 46
TspDTI ATGAA 2 cut(s) 150, 276
Tth111I GACNNNGTC 1 cut(s) 173
VpaK11BI GGWCC 1 cut(s) 55
XapI RAATTY 1 cut(s) 302
ZraI GACGTC 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.