Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004421

Physical Location & Seq

Genomic Coordinates Reverse (-)

30041384 .. 30047320

Gene Structure 5937 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3210 bp

ATGTTGAAGGCGGAGGACTGCTCGAATTGGAACGAGTTACCGGCCGCCGATGGATTTGCAGGAGAAGAATTCGACGACGACGGCGACGAGATGTGCATAGATGTCGACACGCTCTATCGCCTTCTCGATGAAGAACCCACGCAGAGTTGTCCAGAGAATTTGTCATTGGAAAATCGATTGGATGCTGAAGCTGTTTCCGATGCTCAGCTCCTAAGCGGATCTCAAGCAGTAAAAGAAGAACCGCCTATAGAAACCAATTTAATGGGTCCAGGCTCATGGAATCCCCCATACAGATTGGAAGCTTCTCATTCTGGGGCAGGGGGTCAAGATGGCTCTTTTGATTATGAAGGGAACCATGACATGAATTTTGATTACAAAGAAATGCAACCATCATCACACACTGGTTCTCCCGGGCATACGTACTCTGCAAGTCTTAAAGACTGGATTTCCTTGAATCCAGCCAACGAGACTTGCTTTACAGAGAGGGTTGCAGTTTCACAGCCATGTAGCACGGCATCTAGTTTTTCTGAAGGCCATGTTAATCACATTTTGGACCACAGAGATCTGAATGTCCTGCAGGGGGAAGTTGATGTGCCAGGGAAAGCTGAATCTGAATATGCTTCACAATGCCTTGGTATTGAGAACATGGACTTAAATTCCAGAACCTATTTCAATTTGGGGCAAAATACCACGGAAACCATAGGGCTATCTGAAAATAATTCCTGCACTTCTATGGAAATTTCCTCTACCCTCTGTCAAAATTCTAATGTTTTCAGCGACCCTTATACAGCTATGTGTGGCAGGAGCTTAGATAATCCATATTTCACTGATGCCTTAATGGATCATAGTCCGACTAGGTATTATTTTCCGAGTAATGAAGAAATGATGGCTAATGTGAAGGATGAATCAGGGGAGTTTCCAACTGATAGTTCATGCTCAACTACCAAGATGAATTTAAATGGCCAGGAGGGGATAACCGGTAAATCTTCTTTTGAGCCTTCAATGATTGATGTTTTAAATGGGAACCAGTGGAATTTTGGATATGGTAATTGTATGTCAGCAATCAGTGGAAATTCTTCTTTCGATGCTGACTCTTTTCCTGCTGACAACAAAGCATCAGTTGAGCCTTTGTGTTCGACCTATACATACATGTCAAGCAAAAAGGAAACGAATGGTTTGAAAAGTGAAAAGATTGATGAGTTTGTTGCACCAAGTAGCGTTATGCGTCAATCTTTTCGAGGCATGGATGAAGCTGTCAGTAGACAGTCTTATAGTGCTGATGATCACTTTTTTGACAAAGACTCAAAGCAGTCTGGTTTTGGTTTATCAACTCAGAATCTTGGTAACTCAGTGGATGATGATGAAGTCATGATTGCTGCATGTAAGAGAGCTTGTCACTCTCAAGATTTTAGGAATGGAAGTTCCACATCCCCTGTTGATGGTCAATCTGTGAATTCAAATGCCTATTTTCCAGGTGCTCAGCCATTCACTTCATTTGAGAATCAGGGTTACATGAAGGACAAAGTAACTCATTCTAAGAGCATGCTTTTTTCGAAAGTCAGCCCTGAATCAATTCATAGTAACTTCTCTGACAAATCCCCTGCAGAGGATGACGTTGATGTATGTATTATTGAAGATAACAGTCATCCTGCACCCTCAAATCGCTCTTCAGTGGTTAGCAATACTAGTTACGCTGCGCCCGTGTATCAGTCTCCAGCACTTGGAAATACTGTTGTTAATTCTCAACAATTGACGCCGAGTGGTCATTACTCAGGAGTGGGAGGCATGAGATTCAAGACACGAGATGAACAATTGATTTTGAGAGCAGCATTGCAGGACCTTTCACAGCCCAAGTCAGAAGCTATTCCACCGGATGGACTTTTAGCAGTTCCTCTGTTACGGCACCAGAGAATTGCATTGTCATGGATGGTTCAGAAAGAGACAGCAAGTTTGCACTGTTCTGGAGGAATTCTTGCCGATCGATCAGGTCTATATGATTCAGGATTGGGAAAGACAATATCGACAATTGCACTTATACTTAAGGAAAGGCCTTCATCTGGAGCTTGTCAAGATGTAAAAGTGCACAAGCTGGAAACTCTGGATTTGGACAATGATGATGATATGCCTTTTGAGATTGGTGGAAAGAAGCAACATGCTGATGCCCATGAAGTTAGTTCAAATGGAACTCCAAACGAGAGCATAAAACCTTTGATACAAGCAAAGGGAAGGCCAGCTGCTGGAACACTTGTTGTTTGTCCCACGAGTGTCCTCCGGCAATGGGCTGAGGAGCTTCAGAACAAAGTAACTGAAAAAGCTAATCTCTCGGTGCTAGTTTACCATGGATGTAACCGGACAAGGGATCCTTTGGAGCTGGCTAAGCATGATGTTGTTCTCACAACATATTCAATTGTCAGCATGGAGGTTCCTAAGCAGCCTCTTGTTGATGATGATGATGAGGAGAAAGGAAAGCGAGATGAGTACGATGGTCCACATTACAGTAAGAAAAGAAAATACCCCCAAAATTCTGCAAATAAAGGCTCAAAAGGTAAAAAAGGATTAGAGAGTGCTGTGCTCGATTCTGTTGCTCGCCCTCTTGCTAAGGTTGCATGGTTTAGGGTTGTCCTGGATGAGGCTCAGAGTATTAAGAATCACAGAACTCAAGTAGCTAGGGCCTGTTGGGGTCTTCGCGCGAAACGTAGGTGGTGCTTATCAGGGACTCCTATCCAGAATGCAATTGATGACCTTTATAGCTACTTCAGATTTCTAAAATATGACCCTTATGCTGTATACAAGTCATTTTGCTCTACAATTAAGGTCCCAATCAATAGGAATCCAACAAAAGGGTACAGAAAACTTCAAGCTGTTCTGAAGACAATTATGTTACGCCGCACTAAAGGCACACTTCTTGACGGAGAACCTATTATTACTTTACCACCTAAATCTATAGAATTGAAAAGGGTGGAGTTTTCCAAGGAAGAACGGGATTTCTACTCGAGGCTAGAAGCTGATTCACGTGCTCAGTTTGAAGAATATGCAGCAGCTGGAACTGTTAAACAAAATTATGTTAACATTTTGTTGATGCTTTTGCGTCTTCGACAAGCTTGTGATCGTCCTATTCTTGTTAGACGGTATGATTCAAATTCTTTATTGATCGATCTTCAGTTGAGAAGGCAAAGAAACTTCCTCGTGATAAACAACAATCCCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044764 GO:0045003 GO:0046483 GO:0050896 GO:0051704 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2

Protein Analysis

1070

Amino Acids

118.35

Weight (kDa)

5.18

Isoelectric Point (pI)

52.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNF2-rel_dom	PF00176	635 - 1038	6.9e-61	SNF2-related domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G61140 AT1G61140 AT1G61140
fragaria_vesca	FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580
malus_domestica	MD05G1322200.v1.1 MD10G1300200.v1.1
prunus_persica	Prupe.4G040600_v2.0.a1 Prupe.4G040600_v2.0.a1
pyrus_communis	pycom05g29650 pycom10g25290
rosa_chinensis	RchiOBHm_Chr5g0007521
rosa_laevigata	RLG00000031464
rosa_multiflora	Rmu_co8522595.1_g000001 Rmu_ssc0000182.1_g000011
rosa_roxburghii	Rroxscaffold_1G00068890
rosa_rugosa	Rorug04G0427800 Rorug04G0427900 Rorug04G0428000
rosa_samantha	Rh5AG055800 Rh5BG053400 Rh5CG063200 Rh5DG052400
rosa_wichuraiana	Rw5G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1902
AccB7I	CCANNNNNTGG	3 cut(s)	1721, 1874, 2237
AccI	GTMKAC	3 cut(s)	105, 1261, 2787
AccII	CGCG	2 cut(s)	2688, 2690
AciI	CCGC	5 cut(s)	11, 45, 216, 242, 2887
AclWI	GGATC	4 cut(s)	226, 849, 2354, 2367
AcoI	YGGCCR	2 cut(s)	42, 961
AcuI	CTGAAG	7 cut(s)	207, 549, 1653, 2276, 2740, 2888, 3143
AcvI	CACGTG	1 cut(s)	3014
AcyI	GRCGYC	1 cut(s)	1754
AfaI	GTAC	3 cut(s)	422, 2480, 2846
AflII	CTTAAG	1 cut(s)	2039
AflIII	ACRYGT	1 cut(s)	1149
AgeI	ACCGGT	1 cut(s)	977
AhlI	ACTAGT	1 cut(s)	1685
AjnI	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
AjuI	GAANNNNNNNTTGG	4 cut(s)	149, 181, 913, 945
AloI	GAACNNNNNNTCC	2 cut(s)	1405, 1437
Alw21I	GWGCWC	4 cut(s)	1480, 2085, 2574, 3019
Alw26I	GTCTC	3 cut(s)	461, 1716, 1934
Alw44I	GTGCAC	1 cut(s)	2081
AlwI	GGATC	4 cut(s)	226, 849, 2354, 2367
AlwNI	CAGNNNCTG	2 cut(s)	2237, 3041
Ama87I	CYCGRG	2 cut(s)	410, 2992
AoxI	GGCC	6 cut(s)	42, 532, 961, 2048, 2228, 2670
ApaLI	GTGCAC	1 cut(s)	2081
ApeKI	GCWGC	7 cut(s)	1376, 1694, 1826, 2234, 2431, 3035, 3038
ArsI	GACNNNNNNTTYG	4 cut(s)	350, 382, 1933, 1965
AsiGI	ACCGGT	1 cut(s)	977
Asp700I	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
AspLEI	GCGC	2 cut(s)	1699, 2690
AspS9I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
AsuC2I	CCSGG	2 cut(s)	411, 412
AsuII	TTCGAA	1 cut(s)	1553
AvaI	CYCGRG	2 cut(s)	410, 2992
AvaII	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
BaeGI	GKGCMC	1 cut(s)	2085
BalI	TGGCCA	1 cut(s)	963
BamHI	GGATCC	1 cut(s)	2359
BanI	GGYRCC	1 cut(s)	1902
BauI	CACGAG	3 cut(s)	1800, 2260, 3185
BbrPI	CACGTG	1 cut(s)	3014
BbsI	GAAGAC	3 cut(s)	2675, 2876, 3083
Bbv12I	GWGCWC	4 cut(s)	1480, 2085, 2574, 3019
BbvCI	CCTCAGC	1 cut(s)	2283
BbvI	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
BccI	CCATC	8 cut(s)	44, 323, 397, 880, 1433, 1868, 1921, 2477
BceAI	ACGGC	3 cut(s)	97, 528, 1916
BcgI	CGANNNNNNTGC	6 cut(s)	38, 72, 85, 119, 2564, 2598
BciT130I	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
BclI	TGATCA	1 cut(s)	1282
BcnI	CCSGG	2 cut(s)	411, 412
BcoDI	GTCTC	3 cut(s)	461, 1716, 1934
BcuI	ACTAGT	1 cut(s)	1685
BfaI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
BfmI	CTRYAG	4 cut(s)	246, 575, 1602, 2943
BfrI	CTTAAG	1 cut(s)	2039
BglII	AGATCT	1 cut(s)	562
BisI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
BlpI	GCTNAGC	3 cut(s)	204, 1479, 2376
BlsI	GCNGC	9 cut(s)	46, 1378, 1696, 1828, 2236, 2433, 2888, 3037, 3040
Bme1390I	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
Bme18I	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
BmeT110I	CYCGRG	2 cut(s)	410, 2992
BmgT120I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
BmiI	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
BmrFI	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
BmsI	GCATC	8 cut(s)	172, 190, 524, 820, 1075, 1124, 2149, 3069
BpiI	GAAGAC	3 cut(s)	2675, 2876, 3083
BplI	GAGNNNNNCTC	1 cut(s)	37
BpmI	CTGGAG	3 cut(s)	1698, 1983, 2079
Bpu10I	CCTNAGC	4 cut(s)	212, 2283, 2427, 2598
Bpu1102I	GCTNAGC	3 cut(s)	204, 1479, 2376
Bpu14I	TTCGAA	1 cut(s)	1553
BpuEI	CTTGAG	3 cut(s)	207, 1386, 2643
BpuMI	CCSGG	2 cut(s)	411, 412
Bsa29I	ATCGAT	3 cut(s)	175, 1981, 3153
BsaAI	YACGTR	2 cut(s)	420, 3014
BsaHI	GRCGYC	1 cut(s)	1754
BsaJI	CCNNGG	6 cut(s)	410, 596, 631, 690, 2338, 2970
BsaWI	WCCGGW	3 cut(s)	977, 1870, 2349
BsaXI	ACNNNNNCTCC	2 cut(s)	391, 421
Bse118I	RCCGGY	2 cut(s)	40, 977
Bse1I	ACTGG	3 cut(s)	406, 446, 1027
Bse3DI	GCAATG	2 cut(s)	1829, 2282
BseBI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
BseCI	ATCGAT	3 cut(s)	175, 1981, 3153
BseDI	CCNNGG	6 cut(s)	410, 596, 631, 690, 2338, 2970
BseMI	GCAATG	2 cut(s)	1829, 2282
BseMII	CTCAG	8 cut(s)	218, 1346, 1362, 1493, 1785, 2274, 2648, 3032
BseNI	ACTGG	3 cut(s)	406, 446, 1027
BseRI	GAGGAG	2 cut(s)	2300, 2471
BseSI	GKGCMC	1 cut(s)	2085
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
BsgI	GTGCAG	2 cut(s)	709, 1635
Bsh1236I	CGCG	2 cut(s)	2688, 2690
Bsh1285I	CGRYCG	2 cut(s)	45, 1981
BshFI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BshNI	GGYRCC	1 cut(s)	1902
BshTI	ACCGGT	1 cut(s)	977
BshVI	ATCGAT	3 cut(s)	175, 1981, 3153
BsiEI	CGRYCG	2 cut(s)	45, 1981
BsiHKAI	GWGCWC	4 cut(s)	1480, 2085, 2574, 3019
BsiHKCI	CYCGRG	2 cut(s)	410, 2992
BsiSI	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
BslFI	GGGAC	3 cut(s)	2241, 2728, 2801
BsmAI	GTCTC	3 cut(s)	461, 1716, 1934
BsmFI	GGGAC	3 cut(s)	2241, 2728, 2801
BsmI	GAATGC	1 cut(s)	2734
BsnI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BsoBI	CYCGRG	2 cut(s)	410, 2992
Bsp119I	TTCGAA	1 cut(s)	1553
Bsp1286I	GDGCHC	4 cut(s)	1480, 2085, 2574, 3019
Bsp1720I	GCTNAGC	3 cut(s)	204, 1479, 2376
Bsp19I	CCATGG	1 cut(s)	2338
BspACI	CCGC	5 cut(s)	11, 45, 216, 242, 2887
BspANI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BspCNI	CTCAG	8 cut(s)	217, 1345, 1361, 1492, 1784, 2275, 2647, 3031
BspDI	ATCGAT	3 cut(s)	175, 1981, 3153
BspFNI	CGCG	2 cut(s)	2688, 2690
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
BspMAI	CTGCAG	2 cut(s)	579, 1606
BspPI	GGATC	4 cut(s)	226, 849, 2354, 2367
BspQI	GCTCTTC	1 cut(s)	1672
BspT104I	TTCGAA	1 cut(s)	1553
BspT107I	GGYRCC	1 cut(s)	1902
BspTI	CTTAAG	1 cut(s)	2039
BsrDI	GCAATG	2 cut(s)	1829, 2282
BsrFI	RCCGGY	2 cut(s)	40, 977
BsrI	ACTGG	3 cut(s)	406, 446, 1027
BssAI	RCCGGY	2 cut(s)	40, 977
BssECI	CCNNGG	6 cut(s)	410, 596, 631, 690, 2338, 2970
BssNAI	GTATAC	1 cut(s)	2788
BssNI	GRCGYC	1 cut(s)	1754
BssSI	CACGAG	3 cut(s)	1800, 2260, 3185
BssT1I	CCWWGG	3 cut(s)	631, 2338, 2970
Bst1107I	GTATAC	1 cut(s)	2788
Bst2BI	CACGAG	3 cut(s)	1800, 2260, 3185
Bst2UI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
Bst4CI	ACNGT	7 cut(s)	1266, 1643, 1732, 1958, 2498, 3049, 3129
Bst6I	CTCTTC	1 cut(s)	1672
BstACI	GRCGYC	1 cut(s)	1754
BstAFI	CTTAAG	1 cut(s)	2039
BstBAI	YACGTR	2 cut(s)	420, 3014
BstBI	TTCGAA	1 cut(s)	1553
BstC8I	GCNNGC	4 cut(s)	1544, 2232, 2373, 2587
BstDSI	CCRYGG	2 cut(s)	690, 2338
BstENI	CCTNNNNNAGG	1 cut(s)	2627
BstFNI	CGCG	2 cut(s)	2688, 2690
BstHHI	GCGC	2 cut(s)	1699, 2690
BstMAI	GTCTC	3 cut(s)	461, 1716, 1934
BstMCI	CGRYCG	2 cut(s)	45, 1981
BstMWI	GCNNNNNNNGC	3 cut(s)	2377, 2603, 2895
BstNI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
BstNSI	RCATGY	4 cut(s)	1153, 1383, 1546, 2156
BstSCI	CCNGG	7 cut(s)	268, 409, 410, 595, 963, 1471, 2622
BstSFI	CTRYAG	4 cut(s)	246, 575, 1602, 2943
BstSLI	GKGCMC	1 cut(s)	2085
BstSNI	TACGTA	1 cut(s)	420
BstUI	CGCG	2 cut(s)	2688, 2690
BstV1I	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
BstV2I	GAAGAC	3 cut(s)	2675, 2876, 3083
BstX2I	RGATCY	3 cut(s)	218, 562, 2359
BstXI	CCANNNNNNTGG	2 cut(s)	262, 276
BstYI	RGATCY	3 cut(s)	218, 562, 2359
BstZ17I	GTATAC	1 cut(s)	2788
BstZI	CGGCCG	1 cut(s)	42
Bsu15I	ATCGAT	3 cut(s)	175, 1981, 3153
BsuRI	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
BsuTUI	ATCGAT	3 cut(s)	175, 1981, 3153
BtgI	CCRYGG	2 cut(s)	690, 2338
BtsIMutI	CAGTG	7 cut(s)	399, 825, 1034, 1072, 1356, 1677, 1954
Cac8I	GCNNGC	4 cut(s)	1544, 2232, 2373, 2587
CaiI	CAGNNNCTG	2 cut(s)	2237, 3041
CciI	TCATGA	1 cut(s)	1368
CfoI	GCGC	2 cut(s)	1699, 2690
Cfr10I	RCCGGY	2 cut(s)	40, 977
Cfr13I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
Cfr9I	CCCGGG	1 cut(s)	410
ClaI	ATCGAT	3 cut(s)	175, 1981, 3153
CseI	GACGC	3 cut(s)	1214, 1762, 3077
Csp6I	GTAC	3 cut(s)	421, 2479, 2845
CspAI	ACCGGT	1 cut(s)	977
CviQI	GTAC	3 cut(s)	421, 2479, 2845
DraI	TTTAAA	2 cut(s)	957, 1017
EaeI	YGGCCR	2 cut(s)	42, 961
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	1 cut(s)	1672
EarI	CTCTTC	1 cut(s)	1672
EciI	GGCGGA	1 cut(s)	26
EclXI	CGGCCG	1 cut(s)	42
Eco105I	TACGTA	1 cut(s)	420
Eco130I	CCWWGG	3 cut(s)	631, 2338, 2970
Eco147I	AGGCCT	1 cut(s)	2050
Eco47I	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
Eco52I	CGGCCG	1 cut(s)	42
Eco57I	CTGAAG	7 cut(s)	207, 549, 1653, 2276, 2740, 2888, 3143
Eco72I	CACGTG	1 cut(s)	3014
Eco88I	CYCGRG	2 cut(s)	410, 2992
EcoNI	CCTNNNNNAGG	1 cut(s)	2627
EcoO109I	RGGNCCY	3 cut(s)	1837, 2670, 2815
EcoRI	GAATTC	3 cut(s)	68, 1453, 1968
EcoRII	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
EcoT14I	CCWWGG	3 cut(s)	631, 2338, 2970
ErhI	CCWWGG	3 cut(s)	631, 2338, 2970
FalI	AAGNNNNNCTT	4 cut(s)	2347, 2379, 2886, 2918
FaqI	GGGAC	3 cut(s)	2241, 2728, 2801
FbaI	TGATCA	1 cut(s)	1282
FblI	GTMKAC	3 cut(s)	105, 1261, 2787
Fnu4HI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
Fsp4HI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
FspBI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
GlaI	GCGC	2 cut(s)	1698, 2689
GluI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
GsuI	CTGGAG	3 cut(s)	1698, 1983, 2079
HaeIII	GGCC	6 cut(s)	44, 534, 963, 2050, 2230, 2672
HapII	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
HgaI	GACGC	3 cut(s)	1214, 1762, 3077
HhaI	GCGC	2 cut(s)	1699, 2690
Hin1I	GRCGYC	1 cut(s)	1754
Hin6I	GCGC	2 cut(s)	1697, 2688
HinP1I	GCGC	2 cut(s)	1697, 2688
HincII	GTYRAC	2 cut(s)	106, 3067
HindII	GTYRAC	2 cut(s)	106, 3067
HindIII	AAGCTT	2 cut(s)	300, 3099
HpaI	GTTAAC	1 cut(s)	3067
HpaII	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
Hpy166II	GTNNAC	7 cut(s)	106, 1262, 2083, 2335, 2489, 2788, 3067
Hpy8I	GTNNAC	7 cut(s)	106, 1262, 2083, 2335, 2489, 2788, 3067
Hpy99I	CGWCG	4 cut(s)	77, 80, 83, 89
HpyAV	CCTTC	9 cut(s)	131, 341, 524, 892, 1008, 1510, 2061, 2220, 3162
HpyCH4III	ACNGT	7 cut(s)	1266, 1643, 1732, 1958, 2498, 3049, 3129
HpyCH4IV	ACGT	4 cut(s)	419, 1614, 2695, 3013
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2377, 2603, 2895
HpySE526I	ACGT	4 cut(s)	419, 1614, 2695, 3013
Hsp92I	GRCGYC	1 cut(s)	1754
HspAI	GCGC	2 cut(s)	1697, 2688
Ksp22I	TGATCA	1 cut(s)	1282
KspAI	GTTAAC	1 cut(s)	3067
LguI	GCTCTTC	1 cut(s)	1672
LmnI	GCTCC	5 cut(s)	213, 804, 2060, 2287, 2368
Lsp1109I	GCAGC	7 cut(s)	1363, 1681, 1838, 2221, 2443, 3047, 3050
LweI	GCATC	8 cut(s)	172, 190, 524, 820, 1075, 1124, 2149, 3069
MaeI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
MaeII	ACGT	4 cut(s)	419, 1614, 2695, 3013
MfeI	CAATTG	5 cut(s)	1748, 1811, 2025, 2406, 2733
MflI	RGATCY	3 cut(s)	218, 562, 2359
MhlI	GDGCHC	4 cut(s)	1480, 2085, 2574, 3019
MlsI	TGGCCA	1 cut(s)	963
MluNI	TGGCCA	1 cut(s)	963
MlyI	GAGTC	3 cut(s)	1085, 1295, 2710
MmeI	TCCRAC	3 cut(s)	875, 944, 2858
Mox20I	TGGCCA	1 cut(s)	963
MroXI	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
MscI	TGGCCA	1 cut(s)	963
MslI	CAYNNNNRTG	4 cut(s)	502, 731, 1921, 2157
Msp20I	TGGCCA	1 cut(s)	963
MspA1I	CMGCKG	2 cut(s)	2234, 3041
MspCI	CTTAAG	1 cut(s)	2039
MspI	CCGG	6 cut(s)	41, 411, 978, 1871, 2272, 2350
MspR9I	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
MunI	CAATTG	5 cut(s)	1748, 1811, 2025, 2406, 2733
Mva1269I	GAATGC	1 cut(s)	2734
MvaI	CCWGG	5 cut(s)	270, 597, 965, 1473, 2624
MvnI	CGCG	2 cut(s)	2688, 2690
MwoI	GCNNNNNNNGC	3 cut(s)	2377, 2603, 2895
NciI	CCSGG	2 cut(s)	411, 412
NcoI	CCATGG	1 cut(s)	2338
NlaIV	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
NmeAIII	GCCGAG	1 cut(s)	1782
NmuCI	GTSAC	1 cut(s)	1394
NspI	RCATGY	4 cut(s)	1153, 1383, 1546, 2156
NspV	TTCGAA	1 cut(s)	1553
PaeI	GCATGC	1 cut(s)	1546
PaeR7I	CTCGAG	1 cut(s)	2992
PagI	TCATGA	1 cut(s)	1368
PceI	AGGCCT	1 cut(s)	2050
PciI	ACATGT	1 cut(s)	1149
PciSI	GCTCTTC	1 cut(s)	1672
PcsI	WCGNNNNNNNCGW	4 cut(s)	81, 84, 1698, 2692
PctI	GAATGC	1 cut(s)	2734
PdmI	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
PflMI	CCANNNNNTGG	3 cut(s)	1721, 1874, 2237
PfoI	TCCNGGA	1 cut(s)	2622
PinAI	ACCGGT	1 cut(s)	977
PkrI	GCNGC	9 cut(s)	46, 1378, 1696, 1828, 2236, 2433, 2888, 3037, 3040
Ple19I	CGATCG	1 cut(s)	1981
PleI	GAGTC	3 cut(s)	1085, 1295, 2710
PmaCI	CACGTG	1 cut(s)	3014
PmlI	CACGTG	1 cut(s)	3014
PpsI	GAGTC	3 cut(s)	1085, 1295, 2710
Ppu21I	YACGTR	2 cut(s)	420, 3014
PpuMI	RGGWCCY	2 cut(s)	1837, 2815
PscI	ACATGT	1 cut(s)	1149
Psp5II	RGGWCCY	2 cut(s)	1837, 2815
Psp6I	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
PspCI	CACGTG	1 cut(s)	3014
PspGI	CCWGG	5 cut(s)	268, 595, 963, 1471, 2622
PspN4I	GGNNCC	7 cut(s)	267, 353, 1025, 1904, 2361, 2424, 2817
PspPI	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
PspPPI	RGGWCCY	2 cut(s)	1837, 2815
PspXI	VCTCGAGB	1 cut(s)	2992
PstI	CTGCAG	2 cut(s)	579, 1606
PstNI	CAGNNNCTG	2 cut(s)	2237, 3041
PsuI	RGATCY	3 cut(s)	218, 562, 2359
PvuI	CGATCG	1 cut(s)	1981
PvuII	CAGCTG	2 cut(s)	2234, 3041
RsaI	GTAC	3 cut(s)	422, 2480, 2846
RsaNI	GTAC	3 cut(s)	421, 2479, 2845
RseI	CAYNNNNRTG	4 cut(s)	502, 731, 1921, 2157
SalI	GTCGAC	1 cut(s)	104
SapI	GCTCTTC	1 cut(s)	1672
SatI	GCNGC	9 cut(s)	45, 1377, 1695, 1827, 2235, 2432, 2887, 3036, 3039
Sau96I	GGNCC	6 cut(s)	266, 553, 1837, 2486, 2670, 2815
SbfI	CCTGCAGG	1 cut(s)	579
SchI	GAGTC	3 cut(s)	1085, 1295, 2710
ScrFI	CCNGG	7 cut(s)	270, 411, 412, 597, 965, 1473, 2624
SdaI	CCTGCAGG	1 cut(s)	579
SduI	GDGCHC	4 cut(s)	1480, 2085, 2574, 3019
SfaNI	GCATC	8 cut(s)	172, 190, 524, 820, 1075, 1124, 2149, 3069
SfcI	CTRYAG	4 cut(s)	246, 575, 1602, 2943
Sfr274I	CTCGAG	1 cut(s)	2992
SfuI	TTCGAA	1 cut(s)	1553
SinI	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
SlaI	CTCGAG	1 cut(s)	2992
SmaI	CCCGGG	1 cut(s)	412
SmiI	ATTTAAAT	1 cut(s)	957
SmiMI	CAYNNNNRTG	4 cut(s)	502, 731, 1921, 2157
SmlI	CTYRAG	5 cut(s)	222, 1401, 2039, 2658, 2992
SmoI	CTYRAG	5 cut(s)	222, 1401, 2039, 2658, 2992
SnaBI	TACGTA	1 cut(s)	420
SpeI	ACTAGT	1 cut(s)	1685
SphI	GCATGC	1 cut(s)	1546
Sse8387I	CCTGCAGG	1 cut(s)	579
SseBI	AGGCCT	1 cut(s)	2050
SsiI	CCGC	5 cut(s)	11, 45, 216, 242, 2887
SspMI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999
StuI	AGGCCT	1 cut(s)	2050
StyD4I	CCNGG	7 cut(s)	268, 409, 410, 595, 963, 1471, 2622
StyI	CCWWGG	3 cut(s)	631, 2338, 2970
SwaI	ATTTAAAT	1 cut(s)	957
TaaI	ACNGT	7 cut(s)	1266, 1643, 1732, 1958, 2498, 3049, 3129
TaiI	ACGT	4 cut(s)	422, 1617, 2698, 3016
TauI	GCSGC	2 cut(s)	47, 2889
TscAI	CASTG	7 cut(s)	406, 832, 1034, 1072, 1356, 1677, 1961
TseFI	GTSAC	1 cut(s)	1394
TseI	GCWGC	7 cut(s)	1376, 1694, 1826, 2234, 2431, 3035, 3038
Tsp45I	GTSAC	1 cut(s)	1394
TspGWI	ACGGA	2 cut(s)	707, 2925
TspMI	CCCGGG	1 cut(s)	410
TspRI	CASTG	7 cut(s)	406, 832, 1034, 1072, 1356, 1677, 1961
Van91I	CCANNNNNTGG	3 cut(s)	1721, 1874, 2237
Vha464I	CTTAAG	1 cut(s)	2039
VneI	GTGCAC	1 cut(s)	2081
VpaK11BI	GGWCC	5 cut(s)	266, 553, 1837, 2486, 2815
XagI	CCTNNNNNAGG	1 cut(s)	2627
XceI	RCATGY	4 cut(s)	1153, 1383, 1546, 2156
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1034
XhoI	CTCGAG	1 cut(s)	2992
XmaI	CCCGGG	1 cut(s)	410
XmiI	GTMKAC	3 cut(s)	105, 1261, 2787
XmnI	GAANNNNTTC	3 cut(s)	1075, 1572, 1863
XspI	CTAG	6 cut(s)	519, 855, 1686, 2330, 2667, 2999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.