Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001833

Physical Location & Seq

Genomic Coordinates Reverse (-)

15570966 .. 15573459

Gene Structure 2494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g10190.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGCTCAAATACGACAAATCATTCCCTGTCGTAAACCAAATTATTGAGTCCGGTAGCCCAAACTCACAAATCTCTTCTCTTCTTCCGGTCCCTGTGTCGTTGCCTGAGAGTCGTCCTTCGCTCATTTCTTCAACATGTAAAACGATGTGGAGAAGCACCCGCGTCCCCTACCGCCACGTATCCCCGAGGGAATATTCTCGAATATGCCCTCCGCCGCCCGCAGGCGGCGAGCCGCTCATCCGGGTGTCAAACCACGTGGCTAGATTGGGCCCGCCGAAGGAAGGCCCGAAGCCGAGGCAACTCCTGTCTTTGCCGCCTTTTCCGGGCCACCCTTTGCCGGGGAAGAGGTCGCACGAAGACGGCGCCGTTTCGCGCGTCACCGCCGTCAGCTGGGTTAAGTATTACTTCGACGAGATTCGTGACTCTGCCATTCAGTCCCACTTCAACAAAGGCCTTGTTCAGATGGAATGCCCAAATTTGATTGAAAAGGAAGGGCGAATGAAACCCATGAGACAGATTAGGCCTAGTGATGTAGTGGATGTTGGGGCAAGAGTGTTTGTGCCGGTTTCGGTTGCAGAGAGTAGGGTTTCGAGGAGATTCGACTGCATTCCAAGCGGAACATTAAACCCGAATGCTGATGAGATTAAATACTTGCAGAGGCTTGTCAAGTACAAGGACTCTGCTGTCATCGTGTTGAATAAGCCCCCGAAATTGCCAGTCAAGGGTAATCTGCCTGTACATAATGGCATGGATGCATTGGCAGCGGCAGCGTTATCTTATGATTTTAAAGAAGGTCCTAAGTTGGTTCATCGGCTTGACACAGAGAGCAGTGGCCTCCACTTAATGGGGAGAACAAGAGAGAGTGTTTCTCTTCTGCAATGGTTATACACTGACATCGATAAAGGAAAATCACCGTGCAAGGCATGGAACGATGCATGCGATGCAAAATATCAGAGTTATTGGGCATTGGTCATTGGCTCTCCGAAGGAGAAGGAAGGCTTGATCTGTGCTCCTCTTACAAAGGTTGTTCTTGACGATGGGAAGACAGAGAGGGTCATCTTGGCTCATCAATCAGGGTTCCAAACTTCCCAACAGGCTATAACTCAATACCGGGTACTTGGTCCTACGATAAATGGATGCTCATGGATTGAGTTACGTCCACTCACTAGTCGGAAGCATCAGCTCCGTGTCCATTGTGCTGAAGCCCTTGGCACACCAATTGTGGGTGACTTTAAGTACGGGTGGTTTGTGCACAAGAGATGGAAACAAATACCTCAAGTTGATATCGAGCCAACATCTGGGCTACCATACAAGTTGCGGAGGCCAGCAGGCCTGGATGTGCAGAAGGGAAGTGTTCTGTCAAAAGTTCCTCTGCTACATCTACACTGTAGAGAGCTCGTTCTTCCGAATATTGCCAAGTTCCTGCTGTTATTGGATCAGAAGCTGGACGACCAGCACCCCGCAGTTGTTTCAAAACCAGATCTCCTTCGGTTTTGTGCATCGATGCCTTCCCACATGAAAATTAGTTGGAATCTCATGTCATCCTACTTAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016853 GO:0016866 GO:0031119 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

519

Amino Acids

57.94

Weight (kDa)

9.54

Isoelectric Point (pI)

53.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78910 AT1G78910
fragaria_vesca	FvH4_5g04730 FvH4_5g04730 FvH4_5g04730 FvH4_5g04730
malus_domestica	MD06G1108500.v1.1
prunus_persica	Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1
pyrus_communis	pycom06g10190
rosa_chinensis	RchiOBHm_Chr1g0363621 RchiOBHm_Chr6g0299231 RchiOBHm_Chr7g0194671
rosa_laevigata	RLG00000004184 RLG00000011451
rosa_multiflora	Rmu_sc0000548.1_g000009 Rmu_sc0015513.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261180 Rroxscaffold_3G00261210 Rroxscaffold_7G00168890
rosa_rugosa	Rorug01G0308200 Rorug01G0308200 Rorug06G0286400 Rorug07G0016600 Rorug07G0016700
rosa_samantha	Rh1AG317100 Rh6CG412300 Rh6DG399000 Rh7BG144500 Rh7CG148400 Rh7DG145800
rosa_wichuraiana	Rw1G028120 Rw6G034810 Rw7G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	683
AccB1I	GGYRCC	1 cut(s)	362
AccB7I	CCANNNNNTGG	2 cut(s)	844, 1298
AccBSI	CCGCTC	1 cut(s)	235
AccII	CGCG	3 cut(s)	162, 373, 375
AclWI	GGATC	1 cut(s)	1443
AcsI	RAATTY	1 cut(s)	475
AcuI	CTGAAG	1 cut(s)	1221
AcvI	CACGTG	1 cut(s)	256
AcyI	GRCGYC	1 cut(s)	363
AfaI	GTAC	4 cut(s)	671, 738, 1116, 1238
AflIII	ACRYGT	1 cut(s)	134
AgsI	TTSAA	5 cut(s)	132, 445, 485, 697, 1473
AhlI	ACTAGT	1 cut(s)	1166
AjnI	CCWGG	1 cut(s)	1332
AluBI	AGCT	4 cut(s)	390, 1183, 1396, 1444
AluI	AGCT	4 cut(s)	390, 1183, 1396, 1444
Alw21I	GWGCWC	3 cut(s)	1012, 1254, 1398
Alw26I	GTCTC	1 cut(s)	505
Alw44I	GTGCAC	1 cut(s)	1250
AlwI	GGATC	1 cut(s)	1443
AlwNI	CAGNNNCTG	1 cut(s)	1444
Ama87I	CYCGRG	1 cut(s)	184
AoxI	GGCC	8 cut(s)	268, 283, 325, 451, 521, 832, 1322, 1330
ApaI	GGGCCC	1 cut(s)	272
ApaLI	GTGCAC	1 cut(s)	1250
ApeKI	GCWGC	2 cut(s)	761, 767
ApoI	RAATTY	1 cut(s)	475
AspLEI	GCGC	2 cut(s)	365, 375
AspS9I	GGNCC	7 cut(s)	88, 268, 269, 284, 325, 794, 1121
AsuC2I	CCSGG	4 cut(s)	242, 324, 339, 1112
AsuHPI	GGTGA	3 cut(s)	370, 903, 1238
AvaI	CYCGRG	1 cut(s)	184
AvaII	GGWCC	3 cut(s)	88, 794, 1121
BaeGI	GKGCMC	2 cut(s)	272, 1254
BanI	GGYRCC	1 cut(s)	362
BanII	GRGCYC	2 cut(s)	272, 1398
BbrPI	CACGTG	1 cut(s)	256
BbsI	GAAGAC	2 cut(s)	363, 1049
Bbv12I	GWGCWC	3 cut(s)	1012, 1254, 1398
BbvI	GCAGC	2 cut(s)	773, 779
BccI	CCATC	3 cut(s)	457, 1031, 1254
BceAI	ACGGC	3 cut(s)	350, 368, 376
BciT130I	CCWGG	1 cut(s)	1334
BciVI	GTATCC	1 cut(s)	190
BcnI	CCSGG	4 cut(s)	242, 324, 339, 1112
BcoDI	GTCTC	1 cut(s)	505
BcuI	ACTAGT	1 cut(s)	1166
BfaI	CTAG	3 cut(s)	261, 525, 1167
BfmI	CTRYAG	1 cut(s)	1387
BfoI	RGCGCY	1 cut(s)	366
BfuI	GTATCC	1 cut(s)	190
BglII	AGATCT	1 cut(s)	1480
BisI	GCNGC	7 cut(s)	215, 226, 233, 314, 762, 765, 768
BlsI	GCNGC	7 cut(s)	216, 227, 234, 315, 763, 766, 769
Bme1390I	CCNGG	5 cut(s)	242, 324, 339, 1112, 1334
Bme18I	GGWCC	3 cut(s)	88, 794, 1121
BmeT110I	CYCGRG	1 cut(s)	184
BmgT120I	GGNCC	7 cut(s)	88, 268, 269, 284, 325, 794, 1121
BmiI	GGNNCC	4 cut(s)	90, 270, 364, 1079
BmrFI	CCNGG	5 cut(s)	242, 324, 339, 1112, 1334
BmsI	GCATC	7 cut(s)	742, 922, 931, 1127, 1186, 1494, 1508
BpiI	GAAGAC	2 cut(s)	363, 1049
BplI	GAGNNNNNCTC	2 cut(s)	853, 885
BpuEI	CTTGAG	1 cut(s)	1260
BpuMI	CCSGG	4 cut(s)	242, 324, 339, 1112
Bsa29I	ATCGAT	2 cut(s)	897, 1502
BsaAI	YACGTR	2 cut(s)	178, 256
BsaHI	GRCGYC	1 cut(s)	363
BsaJI	CCNNGG	4 cut(s)	185, 293, 338, 1207
BsaWI	WCCGGW	2 cut(s)	50, 85
BsaXI	ACNNNNNCTCC	2 cut(s)	1467, 1497
Bse118I	RCCGGY	1 cut(s)	562
Bse1I	ACTGG	1 cut(s)	716
Bse3DI	GCAATG	1 cut(s)	884
BseBI	CCWGG	1 cut(s)	1334
BseCI	ATCGAT	2 cut(s)	897, 1502
BseDI	CCNNGG	4 cut(s)	185, 293, 338, 1207
BseGI	GGATG	6 cut(s)	237, 544, 757, 1142, 1342, 1541
BseMI	GCAATG	1 cut(s)	884
BseMII	CTCAG	1 cut(s)	96
BseNI	ACTGG	1 cut(s)	716
BseRI	GAGGAG	2 cut(s)	607, 1002
BseSI	GKGCMC	2 cut(s)	272, 1254
BseXI	GCAGC	2 cut(s)	773, 779
BseYI	CCCAGC	1 cut(s)	390
BsgI	GTGCAG	1 cut(s)	1361
Bsh1236I	CGCG	3 cut(s)	162, 373, 375
BshFI	GGCC	8 cut(s)	270, 285, 327, 453, 523, 834, 1324, 1332
BshNI	GGYRCC	1 cut(s)	362
BshVI	ATCGAT	2 cut(s)	897, 1502
BsiHKAI	GWGCWC	3 cut(s)	1012, 1254, 1398
BsiHKCI	CYCGRG	1 cut(s)	184
BsiSI	CCGG	7 cut(s)	51, 86, 241, 323, 338, 563, 1111
BslFI	GGGAC	3 cut(s)	74, 149, 421
BsmAI	GTCTC	1 cut(s)	505
BsmFI	GGGAC	3 cut(s)	74, 149, 421
BsmI	GAATGC	3 cut(s)	473, 606, 637
BsnI	GGCC	8 cut(s)	270, 285, 327, 453, 523, 834, 1324, 1332
BsoBI	CYCGRG	1 cut(s)	184
Bsp120I	GGGCCC	1 cut(s)	268
Bsp1286I	GDGCHC	4 cut(s)	272, 1012, 1254, 1398
Bsp1407I	TGTACA	1 cut(s)	736
Bsp143I	GATC	3 cut(s)	1002, 1435, 1480
BspANI	GGCC	8 cut(s)	270, 285, 327, 453, 523, 834, 1324, 1332
BspCNI	CTCAG	1 cut(s)	97
BspDI	ATCGAT	2 cut(s)	897, 1502
BspFNI	CGCG	3 cut(s)	162, 373, 375
BspLI	GGNNCC	4 cut(s)	90, 270, 364, 1079
BspPI	GGATC	1 cut(s)	1443
BspT107I	GGYRCC	1 cut(s)	362
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	1 cut(s)	884
BsrFI	RCCGGY	1 cut(s)	562
BsrGI	TGTACA	1 cut(s)	736
BsrI	ACTGG	1 cut(s)	716
BssAI	RCCGGY	1 cut(s)	562
BssECI	CCNNGG	4 cut(s)	185, 293, 338, 1207
BssMI	GATC	3 cut(s)	1002, 1435, 1480
BssNI	GRCGYC	1 cut(s)	363
BssT1I	CCWWGG	1 cut(s)	1207
Bst2UI	CCWGG	1 cut(s)	1334
Bst4CI	ACNGT	2 cut(s)	915, 1388
Bst6I	CTCTTC	4 cut(s)	79, 84, 338, 876
BstACI	GRCGYC	1 cut(s)	363
BstAPI	GCANNNNNTGC	1 cut(s)	941
BstAUI	TGTACA	1 cut(s)	736
BstBAI	YACGTR	2 cut(s)	178, 256
BstC8I	GCNNGC	7 cut(s)	219, 223, 230, 272, 937, 1326, 1330
BstDEI	CTNAG	3 cut(s)	105, 798, 1549
BstF5I	GGATG	6 cut(s)	237, 544, 757, 1142, 1342, 1541
BstFNI	CGCG	3 cut(s)	162, 373, 375
BstH2I	RGCGCY	1 cut(s)	366
BstHHI	GCGC	2 cut(s)	365, 375
BstKTI	GATC	3 cut(s)	1005, 1438, 1483
BstMAI	GTCTC	1 cut(s)	505
BstMBI	GATC	3 cut(s)	1002, 1435, 1480
BstMWI	GCNNNNNNNGC	4 cut(s)	612, 761, 767, 941
BstNI	CCWGG	1 cut(s)	1334
BstNSI	RCATGY	2 cut(s)	138, 939
BstSCI	CCNGG	5 cut(s)	240, 322, 337, 1110, 1332
BstSFI	CTRYAG	1 cut(s)	1387
BstSLI	GKGCMC	2 cut(s)	272, 1254
BstUI	CGCG	3 cut(s)	162, 373, 375
BstV1I	GCAGC	2 cut(s)	773, 779
BstV2I	GAAGAC	2 cut(s)	363, 1049
BstX2I	RGATCY	1 cut(s)	1480
BstYI	RGATCY	1 cut(s)	1480
Bsu15I	ATCGAT	2 cut(s)	897, 1502
BsuI	GTATCC	1 cut(s)	190
BsuRI	GGCC	8 cut(s)	270, 285, 327, 453, 523, 834, 1324, 1332
BsuTUI	ATCGAT	2 cut(s)	897, 1502
BtgZI	GCGATG	1 cut(s)	954
BtsCI	GGATG	6 cut(s)	237, 544, 757, 1142, 1342, 1541
BtsI	GCAGTG	1 cut(s)	835
BtsIMutI	CAGTG	3 cut(s)	835, 888, 1384
Cac8I	GCNNGC	7 cut(s)	219, 223, 230, 272, 937, 1326, 1330
CaiI	CAGNNNCTG	1 cut(s)	1444
CfoI	GCGC	2 cut(s)	365, 375
Cfr10I	RCCGGY	1 cut(s)	562
Cfr13I	GGNCC	7 cut(s)	88, 268, 269, 284, 325, 794, 1121
ClaI	ATCGAT	2 cut(s)	897, 1502
CseI	GACGC	2 cut(s)	151, 364
Csp6I	GTAC	4 cut(s)	670, 737, 1115, 1237
CspCI	CAANNNNNGTGG	2 cut(s)	237, 272
CviAII	CATG	8 cut(s)	135, 508, 748, 924, 936, 1143, 1516, 1537
CviQI	GTAC	4 cut(s)	670, 737, 1115, 1237
DdeI	CTNAG	3 cut(s)	105, 798, 1549
DinI	GGCGCC	1 cut(s)	364
DpnI	GATC	3 cut(s)	1004, 1437, 1482
DpnII	GATC	3 cut(s)	1002, 1435, 1480
DraI	TTTAAA	1 cut(s)	787
DrdI	GACNNNNNNGTC	1 cut(s)	683
DseDI	GACNNNNNNGTC	1 cut(s)	683
Eam1104I	CTCTTC	4 cut(s)	79, 84, 338, 876
EarI	CTCTTC	4 cut(s)	79, 84, 338, 876
EciI	GGCGGA	1 cut(s)	201
Ecl136II	GAGCTC	1 cut(s)	1396
Eco130I	CCWWGG	1 cut(s)	1207
Eco147I	AGGCCT	3 cut(s)	453, 523, 1332
Eco24I	GRGCYC	2 cut(s)	272, 1398
Eco32I	GATATC	1 cut(s)	1285
Eco47I	GGWCC	3 cut(s)	88, 794, 1121
Eco53kI	GAGCTC	1 cut(s)	1396
Eco57I	CTGAAG	1 cut(s)	1221
Eco72I	CACGTG	1 cut(s)	256
Eco88I	CYCGRG	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	1396
EcoO109I	RGGNCCY	1 cut(s)	794
EcoRII	CCWGG	1 cut(s)	1332
EcoRV	GATATC	1 cut(s)	1285
EcoT14I	CCWWGG	1 cut(s)	1207
EcoT22I	ATGCAT	2 cut(s)	757, 937
EcoT38I	GRGCYC	2 cut(s)	272, 1398
EgeI	GGCGCC	1 cut(s)	364
EheI	GGCGCC	1 cut(s)	364
ErhI	CCWWGG	1 cut(s)	1207
FaeI	CATG	8 cut(s)	138, 511, 751, 927, 939, 1146, 1519, 1540
FalI	AAGNNNNNCTT	4 cut(s)	389, 421, 983, 1015
FaqI	GGGAC	3 cut(s)	74, 149, 421
FatI	CATG	8 cut(s)	134, 507, 747, 923, 935, 1142, 1515, 1536
FauI	CCCGC	4 cut(s)	167, 226, 279, 1468
Fnu4HI	GCNGC	7 cut(s)	215, 226, 233, 314, 762, 765, 768
FokI	GGATG	6 cut(s)	224, 551, 764, 1149, 1349, 1528
FriOI	GRGCYC	2 cut(s)	272, 1398
Fsp4HI	GCNGC	7 cut(s)	215, 226, 233, 314, 762, 765, 768
FspBI	CTAG	3 cut(s)	261, 525, 1167
GlaI	GCGC	2 cut(s)	364, 374
GluI	GCNGC	7 cut(s)	215, 226, 233, 314, 762, 765, 768
GsaI	CCCAGC	1 cut(s)	394
HaeII	RGCGCY	1 cut(s)	366
HaeIII	GGCC	8 cut(s)	270, 285, 327, 453, 523, 834, 1324, 1332
HapII	CCGG	7 cut(s)	51, 86, 241, 323, 338, 563, 1111
HgaI	GACGC	2 cut(s)	151, 364
HhaI	GCGC	2 cut(s)	365, 375
Hin1I	GRCGYC	1 cut(s)	363
Hin1II	CATG	8 cut(s)	138, 511, 751, 927, 939, 1146, 1519, 1540
Hin6I	GCGC	2 cut(s)	363, 373
HinP1I	GCGC	2 cut(s)	363, 373
HinfI	GANTC	7 cut(s)	47, 109, 415, 422, 597, 677, 1531
HpaII	CCGG	7 cut(s)	51, 86, 241, 323, 338, 563, 1111
HphI	GGTGA	3 cut(s)	370, 903, 1238
Hpy166II	GTNNAC	3 cut(s)	34, 1160, 1252
Hpy188I	TCNGA	6 cut(s)	462, 954, 984, 1173, 1407, 1440
Hpy188III	TCNNGA	3 cut(s)	198, 419, 1031
Hpy8I	GTNNAC	3 cut(s)	34, 1160, 1252
Hpy99I	CGWCG	1 cut(s)	413
HpyCH4III	ACNGT	2 cut(s)	915, 1388
HpyCH4IV	ACGT	3 cut(s)	177, 255, 1156
HpyF10VI	GCNNNNNNNGC	4 cut(s)	612, 761, 767, 941
HpyF3I	CTNAG	3 cut(s)	105, 798, 1549
HpySE526I	ACGT	3 cut(s)	177, 255, 1156
Hsp92I	GRCGYC	1 cut(s)	363
Hsp92II	CATG	8 cut(s)	138, 511, 751, 927, 939, 1146, 1519, 1540
HspAI	GCGC	2 cut(s)	363, 373
KasI	GGCGCC	1 cut(s)	362
Kzo9I	GATC	3 cut(s)	1002, 1435, 1480
LmnI	GCTCC	2 cut(s)	1015, 1188
Lsp1109I	GCAGC	2 cut(s)	773, 779
LweI	GCATC	7 cut(s)	742, 922, 931, 1127, 1186, 1494, 1508
MaeI	CTAG	3 cut(s)	261, 525, 1167
MaeII	ACGT	3 cut(s)	177, 255, 1156
MaeIII	GTNAC	4 cut(s)	376, 419, 1152, 1226
MalI	GATC	3 cut(s)	1004, 1437, 1482
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	3 cut(s)	1002, 1435, 1480
MboII	GAAGA	9 cut(s)	66, 71, 74, 120, 355, 368, 863, 1054, 1394
MfeI	CAATTG	1 cut(s)	1218
MflI	RGATCY	1 cut(s)	1480
MhlI	GDGCHC	4 cut(s)	272, 1012, 1254, 1398
MluCI	AATT	5 cut(s)	39, 475, 710, 1218, 1521
Mly113I	GGCGCC	1 cut(s)	363
MlyI	GAGTC	4 cut(s)	56, 118, 416, 671
MmeI	TCCRAC	2 cut(s)	1151, 1508
Mph1103I	ATGCAT	2 cut(s)	757, 937
MseI	TTAA	6 cut(s)	396, 623, 645, 786, 842, 1233
MslI	CAYNNNNRTG	1 cut(s)	242
MspA1I	CMGCKG	2 cut(s)	390, 764
MspI	CCGG	7 cut(s)	51, 86, 241, 323, 338, 563, 1111
MspR9I	CCNGG	5 cut(s)	242, 324, 339, 1112, 1334
MunI	CAATTG	1 cut(s)	1218
Mva1269I	GAATGC	3 cut(s)	473, 606, 637
MvaI	CCWGG	1 cut(s)	1334
MvnI	CGCG	3 cut(s)	162, 373, 375
MwoI	GCNNNNNNNGC	4 cut(s)	612, 761, 767, 941
NarI	GGCGCC	1 cut(s)	363
NciI	CCSGG	4 cut(s)	242, 324, 339, 1112
NdeII	GATC	3 cut(s)	1002, 1435, 1480
NlaIII	CATG	8 cut(s)	138, 511, 751, 927, 939, 1146, 1519, 1540
NlaIV	GGNNCC	4 cut(s)	90, 270, 364, 1079
NmeAIII	GCCGAG	1 cut(s)	318
NmuCI	GTSAC	3 cut(s)	376, 419, 1226
NsiI	ATGCAT	2 cut(s)	757, 937
NspI	RCATGY	2 cut(s)	138, 939
PaeI	GCATGC	1 cut(s)	939
PceI	AGGCCT	3 cut(s)	453, 523, 1332
PciI	ACATGT	1 cut(s)	134
PcsI	WCGNNNNNNNCGW	1 cut(s)	936
PctI	GAATGC	3 cut(s)	473, 606, 637
PfeI	GAWTC	3 cut(s)	415, 597, 1531
PflMI	CCANNNNNTGG	2 cut(s)	844, 1298
PkrI	GCNGC	7 cut(s)	216, 227, 234, 315, 763, 766, 769
PleI	GAGTC	4 cut(s)	55, 117, 416, 671
PluTI	GGCGCC	1 cut(s)	366
PmaCI	CACGTG	1 cut(s)	256
PmlI	CACGTG	1 cut(s)	256
PpsI	GAGTC	4 cut(s)	55, 117, 416, 671
Ppu21I	YACGTR	2 cut(s)	178, 256
PpuMI	RGGWCCY	1 cut(s)	794
PscI	ACATGT	1 cut(s)	134
Psp124BI	GAGCTC	1 cut(s)	1398
Psp5II	RGGWCCY	1 cut(s)	794
Psp6I	CCWGG	1 cut(s)	1332
PspCI	CACGTG	1 cut(s)	256
PspFI	CCCAGC	1 cut(s)	390
PspGI	CCWGG	1 cut(s)	1332
PspN4I	GGNNCC	4 cut(s)	90, 270, 364, 1079
PspOMI	GGGCCC	1 cut(s)	268
PspPI	GGNCC	7 cut(s)	88, 268, 269, 284, 325, 794, 1121
PspPPI	RGGWCCY	1 cut(s)	794
PstNI	CAGNNNCTG	1 cut(s)	1444
PsuI	RGATCY	1 cut(s)	1480
PvuII	CAGCTG	1 cut(s)	390
RsaI	GTAC	4 cut(s)	671, 738, 1116, 1238
RsaNI	GTAC	4 cut(s)	670, 737, 1115, 1237
RseI	CAYNNNNRTG	1 cut(s)	242
SacI	GAGCTC	1 cut(s)	1398
SaqAI	TTAA	6 cut(s)	396, 623, 645, 786, 842, 1233
SatI	GCNGC	7 cut(s)	215, 226, 233, 314, 762, 765, 768
Sau3AI	GATC	3 cut(s)	1002, 1435, 1480
Sau96I	GGNCC	7 cut(s)	88, 268, 269, 284, 325, 794, 1121
SchI	GAGTC	4 cut(s)	56, 118, 416, 671
ScrFI	CCNGG	5 cut(s)	242, 324, 339, 1112, 1334
SduI	GDGCHC	4 cut(s)	272, 1012, 1254, 1398
SfaNI	GCATC	7 cut(s)	742, 922, 931, 1127, 1186, 1494, 1508
SfcI	CTRYAG	1 cut(s)	1387
SfoI	GGCGCC	1 cut(s)	364
SinI	GGWCC	3 cut(s)	88, 794, 1121
SmiMI	CAYNNNNRTG	1 cut(s)	242
SmlI	CTYRAG	1 cut(s)	1275
SmoI	CTYRAG	1 cut(s)	1275
SpeI	ACTAGT	1 cut(s)	1166
SphI	GCATGC	1 cut(s)	939
Sse9I	AATT	5 cut(s)	39, 475, 710, 1218, 1521
SseBI	AGGCCT	3 cut(s)	453, 523, 1332
SspDI	GGCGCC	1 cut(s)	362
SspI	AATATT	2 cut(s)	194, 1411
SspMI	CTAG	3 cut(s)	261, 525, 1167
SstI	GAGCTC	1 cut(s)	1398
StuI	AGGCCT	3 cut(s)	453, 523, 1332
StyD4I	CCNGG	5 cut(s)	240, 322, 337, 1110, 1332
StyI	CCWWGG	1 cut(s)	1207
TaaI	ACNGT	2 cut(s)	915, 1388
TaiI	ACGT	3 cut(s)	180, 258, 1159
TaqI	TCGA	7 cut(s)	199, 408, 590, 600, 897, 1287, 1502
TasI	AATT	5 cut(s)	39, 475, 710, 1218, 1521
TatI	WGTACW	2 cut(s)	669, 736
TauI	GCSGC	5 cut(s)	217, 228, 235, 316, 767
TfiI	GAWTC	3 cut(s)	415, 597, 1531
Tru1I	TTAA	6 cut(s)	396, 623, 645, 786, 842, 1233
Tru9I	TTAA	6 cut(s)	396, 623, 645, 786, 842, 1233
TscAI	CASTG	3 cut(s)	835, 895, 1391
TseFI	GTSAC	3 cut(s)	376, 419, 1226
TseI	GCWGC	2 cut(s)	761, 767
Tsp45I	GTSAC	3 cut(s)	376, 419, 1226
TspDTI	ATGAA	3 cut(s)	515, 797, 1532
TspGWI	ACGGA	1 cut(s)	1175
TspRI	CASTG	3 cut(s)	835, 895, 1391
Van91I	CCANNNNNTGG	2 cut(s)	844, 1298
VneI	GTGCAC	1 cut(s)	1250
VpaK11BI	GGWCC	3 cut(s)	88, 794, 1121
XapI	RAATTY	1 cut(s)	475
XceI	RCATGY	2 cut(s)	138, 939
XspI	CTAG	3 cut(s)	261, 525, 1167
Zsp2I	ATGCAT	2 cut(s)	757, 937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.