Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001833

Physical Location & Seq

Genomic Coordinates Forward (+)

10704871 .. 10707275

Gene Structure 2405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG144500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGCGGAGAAGAATCGTAACCTACTGCCACGTGTCACTCTGTACTCGCCAATACTCTACCTTATCTCCTCCACCGCCGCAGACCGCCGGACCGCCGCCGCTCATCCGAGTGTCGAACTCGAACCACGTCGCCAAACTGGGCCCACCGAAAGAAGGCCCGAAGCCCAGGCAGCTCCTCTCCTTGCCGCCTTTCCCCGGCGGTCGACATTTGCCGGGGAAGAAGAAGTCATGCCAAGACGGCGCCGTTTCACGACCCTCACACGTCACCGCCGTCAGTTGGCTCAAGTATTACTTCCATGAGATTGACGACACCGCCATTCGGTCCCATTTCAACAAAGGCCTTGTTCAGATGGAATGCCCGGATTCAATTGGGAAGGAAGGGCAAGTGAAACGTATGAGAAAGATTAGGCCTAGTGAGGTAATGGAGGAAGGTGCAAGAGTATATGTACCCGTATCGATTGCGGAGAGTAAAGTTTCAAGGAGATTCGACTGCATACCGAGTGAGACATTGTACCCAAATGCGGATGAGATTGACTACTTGCAAAGGCTTGTCAAGTACAAGGATTCTGCTATAATAGTGCTGAACAAGCCCCCAAAATTGCCAGTCAAGGGTAATGTGCCAGTCCATAACAGCATGGATGCATTGGCAGCAGCAGCATTATCTTATGATTATGATGAAGGTCCTAAATTGGCTTGGAATGATGCATGTAGAACAAAATGTCAGAGGTACTGGGCATTGGTTATAGGGTCGCCCAAGGAAAAGGAAGGCTTAATTTGTGCTCCTCTCATGAAGGTGCTTCTTGACGATGGGAAGACAGAGAGGGTCATCTTGGCTCATCAATCAGGATTAGAAGCTTCCCAACCGGCTCTAACTCAATATCGGGTGCTTGGTCCTACGATAAATGGATGCTCATGGATTGAATTACAACCACTCACTAGCCGAAAGCATCAGCTCCGCGTTCATTGTGCTGAAGCTCTAGGCACGCCAATTGTGGGTGACTATAAGTATGGGTGGTTTGTTCACCGGAGATGGAAACAAATGCCTCAAGTCGATATTGAGCCGGCAACTGGGCTACAATACAAGTTGCGGAGGCCAGCAGGTCTGGATGTACAAAAGGGAAGTGTTCTATCAAAAGTCCCTCTTTTACATCTACACTGTAGAGAGCTCGTACTCCCCAATATTGCTAAGTTCCTTGTTTTATTGGATCAGAAGTCAGACAACCGGCACCCTGTAGATAGTTTGAAGCCAGATATCCTTCGGTTTGTGGCATCGATGCCAACCCACATGAAACTTAGTTGGAATCTCATGTCATCTTATTTGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016853 GO:0016866 GO:0031119 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

441

Amino Acids

49.56

Weight (kDa)

9.53

Isoelectric Point (pI)

55.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	242 - 323	1.2e-08	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78910 AT1G78910
fragaria_vesca	FvH4_5g04730 FvH4_5g04730 FvH4_5g04730 FvH4_5g04730
malus_domestica	MD06G1108500.v1.1
prunus_persica	Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1
pyrus_communis	pycom06g10190
rosa_chinensis	RchiOBHm_Chr1g0363621 RchiOBHm_Chr6g0299231 RchiOBHm_Chr7g0194671
rosa_laevigata	RLG00000004184 RLG00000011451
rosa_multiflora	Rmu_sc0000548.1_g000009 Rmu_sc0015513.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261180 Rroxscaffold_3G00261210 Rroxscaffold_7G00168890
rosa_rugosa	Rorug01G0308200 Rorug01G0308200 Rorug06G0286400 Rorug07G0016600 Rorug07G0016700
rosa_samantha	Rh1AG317100 Rh6CG412300 Rh6DG399000 Rh7BG144500 Rh7CG148400 Rh7DG145800
rosa_wichuraiana	Rw1G028120 Rw6G034810 Rw7G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1088
AccB1I	GGYRCC	2 cut(s)	239, 1224
AccBSI	CCGCTC	1 cut(s)	100
AccI	GTMKAC	1 cut(s)	202
AccII	CGCG	1 cut(s)	957
AclWI	GGATC	1 cut(s)	1212
AcuI	CTGAAG	1 cut(s)	990
AcvI	CACGTG	1 cut(s)	31
AcyI	GRCGYC	1 cut(s)	240
AfaI	GTAC	7 cut(s)	43, 447, 512, 557, 728, 1110, 1170
AfiI	CCNNNNNNNGG	8 cut(s)	152, 194, 276, 318, 520, 608, 992, 1067
AflIII	ACRYGT	2 cut(s)	30, 259
AgsI	TTSAA	5 cut(s)	331, 366, 477, 920, 1243
AjiI	CACGTC	2 cut(s)	127, 262
AjnI	CCWGG	1 cut(s)	164
AluBI	AGCT	5 cut(s)	172, 854, 952, 974, 1165
AluI	AGCT	5 cut(s)	172, 854, 952, 974, 1165
Alw21I	GWGCWC	2 cut(s)	781, 1167
Alw26I	GTCTC	1 cut(s)	497
AlwI	GGATC	1 cut(s)	1212
AoxI	GGCC	5 cut(s)	139, 154, 337, 407, 1091
ApaI	GGGCCC	1 cut(s)	143
ApeKI	GCWGC	4 cut(s)	169, 647, 650, 653
AspLEI	GCGC	1 cut(s)	242
AspS9I	GGNCC	7 cut(s)	89, 139, 140, 155, 321, 680, 890
AsuC2I	CCSGG	3 cut(s)	195, 213, 359
AsuHPI	GGTGA	3 cut(s)	256, 1007, 1013
AvaII	GGWCC	4 cut(s)	89, 321, 680, 890
BaeGI	GKGCMC	1 cut(s)	143
BanI	GGYRCC	2 cut(s)	239, 1224
BanII	GRGCYC	2 cut(s)	143, 1167
BbrPI	CACGTG	1 cut(s)	31
BbsI	GAAGAC	1 cut(s)	818
Bbv12I	GWGCWC	2 cut(s)	781, 1167
BbvI	GCAGC	4 cut(s)	181, 659, 662, 665
BccI	CCATC	3 cut(s)	343, 800, 1023
BceAI	ACGGC	3 cut(s)	227, 253, 254
BciT130I	CCWGG	1 cut(s)	166
BcnI	CCSGG	3 cut(s)	195, 213, 359
BcoDI	GTCTC	1 cut(s)	497
BfaI	CTAG	3 cut(s)	411, 936, 977
BfmI	CTRYAG	2 cut(s)	1156, 1230
BfoI	RGCGCY	1 cut(s)	243
BfuAI	ACCTGC	1 cut(s)	1088
BglI	GCCNNNNNGGC	1 cut(s)	237
BisI	GCNGC	8 cut(s)	77, 95, 98, 170, 185, 648, 651, 654
BlsI	GCNGC	8 cut(s)	78, 96, 99, 171, 186, 649, 652, 655
Bme1390I	CCNGG	4 cut(s)	166, 195, 213, 359
Bme18I	GGWCC	4 cut(s)	89, 321, 680, 890
BmgBI	CACGTC	2 cut(s)	127, 262
BmgT120I	GGNCC	7 cut(s)	89, 139, 140, 155, 321, 680, 890
BmiI	GGNNCC	4 cut(s)	141, 241, 323, 1226
BmrFI	CCNGG	4 cut(s)	166, 195, 213, 359
BmrI	ACTGGG	3 cut(s)	146, 739, 1077
BmsI	GCATC	6 cut(s)	628, 691, 896, 955, 1263, 1277
BmuI	ACTGGG	3 cut(s)	146, 739, 1077
BpiI	GAAGAC	1 cut(s)	818
BpuEI	CTTGAG	2 cut(s)	266, 1029
BpuMI	CCSGG	3 cut(s)	195, 213, 359
Bsa29I	ATCGAT	2 cut(s)	455, 1271
BsaAI	YACGTR	1 cut(s)	31
BsaHI	GRCGYC	1 cut(s)	240
BsaJI	CCNNGG	4 cut(s)	164, 193, 212, 753
BsaWI	WCCGGW	1 cut(s)	1023
BsaXI	ACNNNNNCTCC	2 cut(s)	49, 79
Bsc4I	CCNNNNNNNGG	8 cut(s)	152, 194, 276, 318, 520, 608, 992, 1067
Bse118I	RCCGGY	3 cut(s)	862, 1060, 1221
Bse1I	ACTGG	5 cut(s)	141, 602, 620, 734, 1072
BseBI	CCWGG	1 cut(s)	166
BseCI	ATCGAT	2 cut(s)	455, 1271
BseDI	CCNNGG	4 cut(s)	164, 193, 212, 753
BseGI	GGATG	5 cut(s)	102, 529, 643, 911, 1111
BseLI	CCNNNNNNNGG	8 cut(s)	152, 194, 276, 318, 520, 608, 992, 1067
BseNI	ACTGG	5 cut(s)	141, 602, 620, 734, 1072
BseRI	GAGGAG	3 cut(s)	57, 164, 771
BseSI	GKGCMC	1 cut(s)	143
BseXI	GCAGC	4 cut(s)	181, 659, 662, 665
Bsh1236I	CGCG	1 cut(s)	957
Bsh1285I	CGRYCG	1 cut(s)	202
BshFI	GGCC	5 cut(s)	141, 156, 339, 409, 1093
BshNI	GGYRCC	2 cut(s)	239, 1224
BshVI	ATCGAT	2 cut(s)	455, 1271
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	2 cut(s)	781, 1167
BsiSI	CCGG	8 cut(s)	87, 195, 212, 359, 863, 1024, 1061, 1222
BslFI	GGGAC	2 cut(s)	307, 1121
BslI	CCNNNNNNNGG	8 cut(s)	152, 194, 276, 318, 520, 608, 992, 1067
BsmAI	GTCTC	1 cut(s)	497
BsmFI	GGGAC	2 cut(s)	307, 1121
BsmI	GAATGC	1 cut(s)	359
BsnI	GGCC	5 cut(s)	141, 156, 339, 409, 1093
Bsp120I	GGGCCC	1 cut(s)	139
Bsp1286I	GDGCHC	3 cut(s)	143, 781, 1167
Bsp1407I	TGTACA	1 cut(s)	1108
Bsp143I	GATC	1 cut(s)	1204
BspANI	GGCC	5 cut(s)	141, 156, 339, 409, 1093
BspDI	ATCGAT	2 cut(s)	455, 1271
BspFNI	CGCG	1 cut(s)	957
BspHI	TCATGA	1 cut(s)	786
BspLI	GGNNCC	4 cut(s)	141, 241, 323, 1226
BspMI	ACCTGC	1 cut(s)	1088
BspPI	GGATC	1 cut(s)	1212
BspT107I	GGYRCC	2 cut(s)	239, 1224
BsrBI	CCGCTC	1 cut(s)	100
BsrFI	RCCGGY	3 cut(s)	862, 1060, 1221
BsrGI	TGTACA	1 cut(s)	1108
BsrI	ACTGG	5 cut(s)	141, 602, 620, 734, 1072
BssAI	RCCGGY	3 cut(s)	862, 1060, 1221
BssECI	CCNNGG	4 cut(s)	164, 193, 212, 753
BssMI	GATC	1 cut(s)	1204
BssNI	GRCGYC	1 cut(s)	240
BssT1I	CCWWGG	1 cut(s)	753
Bst2UI	CCWGG	1 cut(s)	166
Bst4CI	ACNGT	1 cut(s)	1157
BstACI	GRCGYC	1 cut(s)	240
BstAUI	TGTACA	1 cut(s)	1108
BstBAI	YACGTR	1 cut(s)	31
BstC8I	GCNNGC	3 cut(s)	983, 1062, 1095
BstDEI	CTNAG	2 cut(s)	1185, 1292
BstF5I	GGATG	5 cut(s)	102, 529, 643, 911, 1111
BstFNI	CGCG	1 cut(s)	957
BstH2I	RGCGCY	1 cut(s)	243
BstHHI	GCGC	1 cut(s)	242
BstKTI	GATC	1 cut(s)	1207
BstMAI	GTCTC	1 cut(s)	497
BstMBI	GATC	1 cut(s)	1204
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	5 cut(s)	169, 237, 586, 647, 653
BstNI	CCWGG	1 cut(s)	166
BstNSI	RCATGY	1 cut(s)	708
BstSCI	CCNGG	4 cut(s)	164, 193, 211, 357
BstSFI	CTRYAG	2 cut(s)	1156, 1230
BstSLI	GKGCMC	1 cut(s)	143
BstUI	CGCG	1 cut(s)	957
BstV1I	GCAGC	4 cut(s)	181, 659, 662, 665
BstV2I	GAAGAC	1 cut(s)	818
Bsu15I	ATCGAT	2 cut(s)	455, 1271
BsuRI	GGCC	5 cut(s)	141, 156, 339, 409, 1093
BsuTUI	ATCGAT	2 cut(s)	455, 1271
BtrI	CACGTC	2 cut(s)	127, 262
BtsCI	GGATG	5 cut(s)	102, 529, 643, 911, 1111
BtsIMutI	CAGTG	1 cut(s)	1153
BveI	ACCTGC	1 cut(s)	1088
Cac8I	GCNNGC	3 cut(s)	983, 1062, 1095
CciI	TCATGA	1 cut(s)	786
CfoI	GCGC	1 cut(s)	242
Cfr10I	RCCGGY	3 cut(s)	862, 1060, 1221
Cfr13I	GGNCC	7 cut(s)	89, 139, 140, 155, 321, 680, 890
ClaI	ATCGAT	2 cut(s)	455, 1271
CpoI	CGGWCCG	1 cut(s)	89
Csp6I	GTAC	7 cut(s)	42, 446, 511, 556, 727, 1109, 1169
CspI	CGGWCCG	1 cut(s)	89
CviAII	CATG	8 cut(s)	228, 296, 634, 705, 787, 912, 1285, 1306
CviQI	GTAC	7 cut(s)	42, 446, 511, 556, 727, 1109, 1169
DdeI	CTNAG	2 cut(s)	1185, 1292
DinI	GGCGCC	1 cut(s)	241
DpnI	GATC	1 cut(s)	1206
DpnII	GATC	1 cut(s)	1204
Ecl136II	GAGCTC	1 cut(s)	1165
Eco130I	CCWWGG	1 cut(s)	753
Eco147I	AGGCCT	2 cut(s)	339, 409
Eco24I	GRGCYC	2 cut(s)	143, 1167
Eco32I	GATATC	1 cut(s)	1252
Eco47I	GGWCC	4 cut(s)	89, 321, 680, 890
Eco53kI	GAGCTC	1 cut(s)	1165
Eco57I	CTGAAG	1 cut(s)	990
Eco72I	CACGTG	1 cut(s)	31
EcoICRI	GAGCTC	1 cut(s)	1165
EcoO109I	RGGNCCY	1 cut(s)	680
EcoRII	CCWGG	1 cut(s)	164
EcoRV	GATATC	1 cut(s)	1252
EcoT14I	CCWWGG	1 cut(s)	753
EcoT22I	ATGCAT	2 cut(s)	643, 706
EcoT38I	GRGCYC	2 cut(s)	143, 1167
EgeI	GGCGCC	1 cut(s)	241
EheI	GGCGCC	1 cut(s)	241
ErhI	CCWWGG	1 cut(s)	753
FaeI	CATG	8 cut(s)	231, 299, 637, 708, 790, 915, 1288, 1309
FalI	AAGNNNNNCTT	6 cut(s)	275, 307, 752, 784, 1125, 1157
FaqI	GGGAC	2 cut(s)	307, 1121
FatI	CATG	8 cut(s)	227, 295, 633, 704, 786, 911, 1284, 1305
FblI	GTMKAC	1 cut(s)	202
Fnu4HI	GCNGC	8 cut(s)	77, 95, 98, 170, 185, 648, 651, 654
FokI	GGATG	5 cut(s)	89, 536, 650, 918, 1118
FriOI	GRGCYC	2 cut(s)	143, 1167
Fsp4HI	GCNGC	8 cut(s)	77, 95, 98, 170, 185, 648, 651, 654
FspBI	CTAG	3 cut(s)	411, 936, 977
GlaI	GCGC	1 cut(s)	241
GluI	GCNGC	8 cut(s)	77, 95, 98, 170, 185, 648, 651, 654
HaeII	RGCGCY	1 cut(s)	243
HaeIII	GGCC	5 cut(s)	141, 156, 339, 409, 1093
HapII	CCGG	8 cut(s)	87, 195, 212, 359, 863, 1024, 1061, 1222
HhaI	GCGC	1 cut(s)	242
Hin1I	GRCGYC	1 cut(s)	240
Hin1II	CATG	8 cut(s)	231, 299, 637, 708, 790, 915, 1288, 1309
Hin6I	GCGC	1 cut(s)	240
HinP1I	GCGC	1 cut(s)	240
HincII	GTYRAC	1 cut(s)	203
HindII	GTYRAC	1 cut(s)	203
HindIII	AAGCTT	1 cut(s)	852
HinfI	GANTC	5 cut(s)	12, 362, 483, 563, 1300
HpaII	CCGG	8 cut(s)	87, 195, 212, 359, 863, 1024, 1061, 1222
HphI	GGTGA	3 cut(s)	256, 1007, 1013
Hpy166II	GTNNAC	2 cut(s)	203, 1021
Hpy188I	TCNGA	5 cut(s)	107, 348, 723, 1209, 1216
Hpy188III	TCNNGA	5 cut(s)	249, 787, 800, 843, 1103
Hpy8I	GTNNAC	2 cut(s)	203, 1021
Hpy99I	CGWCG	1 cut(s)	131
HpyAV	CCTTC	8 cut(s)	146, 367, 371, 422, 671, 758, 784, 1265
HpyCH4III	ACNGT	1 cut(s)	1157
HpyCH4IV	ACGT	4 cut(s)	30, 126, 261, 391
HpyCH4V	TGCA	5 cut(s)	434, 492, 541, 641, 704
HpyF10VI	GCNNNNNNNGC	5 cut(s)	169, 237, 586, 647, 653
HpyF3I	CTNAG	2 cut(s)	1185, 1292
HpySE526I	ACGT	4 cut(s)	30, 126, 261, 391
Hsp92I	GRCGYC	1 cut(s)	240
Hsp92II	CATG	8 cut(s)	231, 299, 637, 708, 790, 915, 1288, 1309
HspAI	GCGC	1 cut(s)	240
KasI	GGCGCC	1 cut(s)	239
KroI	GCCGGC	1 cut(s)	1060
KroNI	GCCGGC	1 cut(s)	1062
Kzo9I	GATC	1 cut(s)	1204
LmnI	GCTCC	3 cut(s)	177, 784, 957
Lsp1109I	GCAGC	4 cut(s)	181, 659, 662, 665
LweI	GCATC	6 cut(s)	628, 691, 896, 955, 1263, 1277
MaeI	CTAG	3 cut(s)	411, 936, 977
MaeII	ACGT	4 cut(s)	30, 126, 261, 391
MaeIII	GTNAC	4 cut(s)	16, 33, 262, 995
MalI	GATC	1 cut(s)	1206
MbiI	CCGCTC	1 cut(s)	100
MboI	GATC	1 cut(s)	1204
MboII	GAAGA	4 cut(s)	21, 229, 232, 823
MfeI	CAATTG	2 cut(s)	366, 987
MhlI	GDGCHC	3 cut(s)	143, 781, 1167
MluCI	AATT	6 cut(s)	366, 596, 686, 771, 920, 987
Mly113I	GGCGCC	1 cut(s)	240
MmeI	TCCRAC	1 cut(s)	1277
Mph1103I	ATGCAT	2 cut(s)	643, 706
MroNI	GCCGGC	1 cut(s)	1060
MseI	TTAA	1 cut(s)	770
MslI	CAYNNNNRTG	2 cut(s)	107, 791
MspI	CCGG	8 cut(s)	87, 195, 212, 359, 863, 1024, 1061, 1222
MspR9I	CCNGG	4 cut(s)	166, 195, 213, 359
MunI	CAATTG	2 cut(s)	366, 987
Mva1269I	GAATGC	1 cut(s)	359
MvaI	CCWGG	1 cut(s)	166
MvnI	CGCG	1 cut(s)	957
MwoI	GCNNNNNNNGC	5 cut(s)	169, 237, 586, 647, 653
NaeI	GCCGGC	1 cut(s)	1062
NarI	GGCGCC	1 cut(s)	240
NciI	CCSGG	3 cut(s)	195, 213, 359
NdeII	GATC	1 cut(s)	1204
NgoMIV	GCCGGC	1 cut(s)	1060
NlaIII	CATG	8 cut(s)	231, 299, 637, 708, 790, 915, 1288, 1309
NlaIV	GGNNCC	4 cut(s)	141, 241, 323, 1226
NmuCI	GTSAC	3 cut(s)	33, 262, 995
NsiI	ATGCAT	2 cut(s)	643, 706
NspI	RCATGY	1 cut(s)	708
PagI	TCATGA	1 cut(s)	786
PceI	AGGCCT	2 cut(s)	339, 409
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PctI	GAATGC	1 cut(s)	359
PdiI	GCCGGC	1 cut(s)	1062
PfeI	GAWTC	5 cut(s)	12, 362, 483, 563, 1300
PkrI	GCNGC	8 cut(s)	78, 96, 99, 171, 186, 649, 652, 655
PluTI	GGCGCC	1 cut(s)	243
PmaCI	CACGTG	1 cut(s)	31
PmlI	CACGTG	1 cut(s)	31
Ppu21I	YACGTR	1 cut(s)	31
PpuMI	RGGWCCY	1 cut(s)	680
Psp124BI	GAGCTC	1 cut(s)	1167
Psp5II	RGGWCCY	1 cut(s)	680
Psp6I	CCWGG	1 cut(s)	164
PspCI	CACGTG	1 cut(s)	31
PspGI	CCWGG	1 cut(s)	164
PspN4I	GGNNCC	4 cut(s)	141, 241, 323, 1226
PspOMI	GGGCCC	1 cut(s)	139
PspPI	GGNCC	7 cut(s)	89, 139, 140, 155, 321, 680, 890
PspPPI	RGGWCCY	1 cut(s)	680
RsaI	GTAC	7 cut(s)	43, 447, 512, 557, 728, 1110, 1170
RsaNI	GTAC	7 cut(s)	42, 446, 511, 556, 727, 1109, 1169
RseI	CAYNNNNRTG	2 cut(s)	107, 791
Rsr2I	CGGWCCG	1 cut(s)	89
RsrII	CGGWCCG	1 cut(s)	89
SacI	GAGCTC	1 cut(s)	1167
SalI	GTCGAC	1 cut(s)	201
SaqAI	TTAA	1 cut(s)	770
SatI	GCNGC	8 cut(s)	77, 95, 98, 170, 185, 648, 651, 654
Sau3AI	GATC	1 cut(s)	1204
Sau96I	GGNCC	7 cut(s)	89, 139, 140, 155, 321, 680, 890
ScrFI	CCNGG	4 cut(s)	166, 195, 213, 359
SduI	GDGCHC	3 cut(s)	143, 781, 1167
SfaNI	GCATC	6 cut(s)	628, 691, 896, 955, 1263, 1277
SfcI	CTRYAG	2 cut(s)	1156, 1230
SfoI	GGCGCC	1 cut(s)	241
SinI	GGWCC	4 cut(s)	89, 321, 680, 890
SmiMI	CAYNNNNRTG	2 cut(s)	107, 791
SmlI	CTYRAG	2 cut(s)	281, 1044
SmoI	CTYRAG	2 cut(s)	281, 1044
Sse9I	AATT	6 cut(s)	366, 596, 686, 771, 920, 987
SseBI	AGGCCT	2 cut(s)	339, 409
SspDI	GGCGCC	1 cut(s)	239
SspI	AATATT	1 cut(s)	1180
SspMI	CTAG	3 cut(s)	411, 936, 977
SstI	GAGCTC	1 cut(s)	1167
StuI	AGGCCT	2 cut(s)	339, 409
StyD4I	CCNGG	4 cut(s)	164, 193, 211, 357
StyI	CCWWGG	1 cut(s)	753
TaaI	ACNGT	1 cut(s)	1157
TaiI	ACGT	4 cut(s)	33, 129, 264, 394
TaqI	TCGA	7 cut(s)	113, 119, 202, 455, 486, 1050, 1271
TaqII	GACCGA	1 cut(s)	309
TasI	AATT	6 cut(s)	366, 596, 686, 771, 920, 987
TatI	WGTACW	3 cut(s)	41, 555, 1108
TauI	GCSGC	4 cut(s)	79, 97, 100, 187
TfiI	GAWTC	5 cut(s)	12, 362, 483, 563, 1300
Tru1I	TTAA	1 cut(s)	770
Tru9I	TTAA	1 cut(s)	770
TscAI	CASTG	1 cut(s)	1160
TseFI	GTSAC	3 cut(s)	33, 262, 995
TseI	GCWGC	4 cut(s)	169, 647, 650, 653
Tsp45I	GTSAC	3 cut(s)	33, 262, 995
TspDTI	ATGAA	4 cut(s)	690, 803, 950, 1301
TspRI	CASTG	1 cut(s)	1160
VpaK11BI	GGWCC	4 cut(s)	89, 321, 680, 890
XceI	RCATGY	1 cut(s)	708
XmiI	GTMKAC	1 cut(s)	202
XspI	CTAG	3 cut(s)	411, 936, 977
Zsp2I	ATGCAT	2 cut(s)	643, 706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.