Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000548.1

Orthogroup ID

OG0001833

Physical Location & Seq

Genomic Coordinates Forward (+)

38001 .. 40385

Gene Structure 2385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000548.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

atgcggagaagaatcgtaacctactgccacgtgtccccctttactcgccaatactctagcttatctcctccgccgccgctcatccgagtgtcgaaccacgtcgccaaactgggcccaccgaaagaaggcccgaaacccaggcagctcctctccttgccgcctttccccggcggtcgacatttgccggggaagaagaagtcataccaagacggcgccgtttcacgaccctcacacgtcaccgccgtcagttggctcaagtattacttccatgagattgacgacaccgccattcggtcccatttcaacaaaggccttgttcagatggaaggcccggattcaattgggaaggaagggcaagtgaaacgtatgagaaagattaggcctagtgaggtaatggaggaaggtgcaagagtatatgtacccgtatcgattgcagagagtaaaatttcaaggagattcgactgcataccgagtgagacattgtacccaaatgcggatgagattgactacttgcaaaggcttgtcaagtacaaggactctgctataatagtgctgaacaagcccccaaaattgccagtcaagggtaatgtgccagtccataacagcatggatgcattggcagcagcagcattatcttatgattatgatgaaggtcctaaattggttcatcggcttgacagagagagcagtggcctccttttaatgggaagaacaaaagacagtgtatctcttctgcattcgttatacactgacatcaacattgggaaatcatcatgcagggcttggaatgatgcatgtagaacaaaatgtcagaggtactgggcattggttatagggtcgcccaaggaaaaggaaggcttaatttgtgctcctctcatgaaggtgcttcttgacgatgggaagacagagagggtcatcttggctcctcagtcaggattagaagcttcccaaccggctctaactcaatatcgggtgcttggtcctacgataaatggatgctcatggattgaattacaaccactcactagccgaaagcatcagctccgtgttcattgtgctgaagctttaggcacgccaattgtgggtgactataagtatgggtggtttgttcaccggagatggaaacaaatgcctcaagtcgatattgagccggcaactgggctacaatacaagttgcggaggccagcaggtctggatgtacagaagggaagtgttctatcaaaagtccctcttttgcatctacactgtagagagctcgtactccccaatattgctaagttccttgttttattggatcagaagtcagacaactggcaccctgtagacagtttgaagccagatatccttcggtttgtggcatcgatgccaacccacatgaaacttagttggaatctcatgtcatcttatttggtgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016853 GO:0016866 GO:0031119 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

471

Amino Acids

53.08

Weight (kDa)

9.59

Isoelectric Point (pI)

54.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78910 AT1G78910
fragaria_vesca	FvH4_5g04730 FvH4_5g04730 FvH4_5g04730 FvH4_5g04730
malus_domestica	MD06G1108500.v1.1
prunus_persica	Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1
pyrus_communis	pycom06g10190
rosa_chinensis	RchiOBHm_Chr1g0363621 RchiOBHm_Chr6g0299231 RchiOBHm_Chr7g0194671
rosa_laevigata	RLG00000004184 RLG00000011451
rosa_multiflora	Rmu_sc0000548.1_g000009 Rmu_sc0015513.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261180 Rroxscaffold_3G00261210 Rroxscaffold_7G00168890
rosa_rugosa	Rorug01G0308200 Rorug01G0308200 Rorug06G0286400 Rorug07G0016600 Rorug07G0016700
rosa_samantha	Rh1AG317100 Rh6CG412300 Rh6DG399000 Rh7BG144500 Rh7CG148400 Rh7DG145800
rosa_wichuraiana	Rw1G028120 Rw6G034810 Rw7G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1178
AccB1I	GGYRCC	2 cut(s)	212, 1314
AccBSI	CCGCTC	1 cut(s)	79
AccI	GTMKAC	2 cut(s)	175, 1323
AclWI	GGATC	1 cut(s)	1302
AcsI	RAATTY	1 cut(s)	444
AcuI	CTGAAG	1 cut(s)	1080
AcvI	CACGTG	1 cut(s)	31
AcyI	GRCGYC	1 cut(s)	213
AfaI	GTAC	6 cut(s)	420, 485, 530, 818, 1200, 1260
AflIII	ACRYGT	2 cut(s)	30, 232
AgsI	TTSAA	5 cut(s)	304, 339, 450, 1010, 1333
AjiI	CACGTC	2 cut(s)	100, 235
AjnI	CCWGG	1 cut(s)	137
AluBI	AGCT	6 cut(s)	60, 145, 944, 1042, 1064, 1255
AluI	AGCT	6 cut(s)	60, 145, 944, 1042, 1064, 1255
Alw21I	GWGCWC	2 cut(s)	871, 1257
Alw26I	GTCTC	1 cut(s)	470
AlwI	GGATC	1 cut(s)	1302
AoxI	GGCC	7 cut(s)	112, 127, 310, 328, 380, 691, 1181
ApaI	GGGCCC	1 cut(s)	116
ApeKI	GCWGC	4 cut(s)	142, 620, 623, 626
ApoI	RAATTY	1 cut(s)	444
AspLEI	GCGC	1 cut(s)	215
AspS9I	GGNCC	7 cut(s)	112, 113, 128, 294, 329, 653, 980
AsuC2I	CCSGG	3 cut(s)	168, 186, 332
AsuHPI	GGTGA	3 cut(s)	229, 1097, 1103
AvaII	GGWCC	3 cut(s)	294, 653, 980
BaeGI	GKGCMC	1 cut(s)	116
BanI	GGYRCC	2 cut(s)	212, 1314
BanII	GRGCYC	2 cut(s)	116, 1257
BarI	GAAGNNNNNNTAC	2 cut(s)	185, 217
BbrPI	CACGTG	1 cut(s)	31
BbsI	GAAGAC	1 cut(s)	908
Bbv12I	GWGCWC	2 cut(s)	871, 1257
BbvI	GCAGC	4 cut(s)	154, 632, 635, 638
BccI	CCATC	3 cut(s)	316, 890, 1113
BceAI	ACGGC	3 cut(s)	200, 226, 227
BciT130I	CCWGG	1 cut(s)	139
BcnI	CCSGG	3 cut(s)	168, 186, 332
BcoDI	GTCTC	1 cut(s)	470
BfaI	CTAG	3 cut(s)	57, 384, 1026
BfmI	CTRYAG	2 cut(s)	1246, 1320
BfoI	RGCGCY	1 cut(s)	216
BfuAI	ACCTGC	1 cut(s)	1178
BisI	GCNGC	7 cut(s)	74, 77, 143, 158, 621, 624, 627
BlsI	GCNGC	7 cut(s)	75, 78, 144, 159, 622, 625, 628
Bme1390I	CCNGG	4 cut(s)	139, 168, 186, 332
Bme18I	GGWCC	3 cut(s)	294, 653, 980
BmgBI	CACGTC	2 cut(s)	100, 235
BmgT120I	GGNCC	7 cut(s)	112, 113, 128, 294, 329, 653, 980
BmiI	GGNNCC	5 cut(s)	114, 214, 296, 924, 1316
BmrFI	CCNGG	4 cut(s)	139, 168, 186, 332
BmrI	ACTGGG	3 cut(s)	119, 829, 1167
BmsI	GCATC	7 cut(s)	601, 781, 986, 1045, 1246, 1353, 1367
BmuI	ACTGGG	3 cut(s)	119, 829, 1167
BpiI	GAAGAC	1 cut(s)	908
BpuEI	CTTGAG	2 cut(s)	239, 1119
BpuMI	CCSGG	3 cut(s)	168, 186, 332
Bsa29I	ATCGAT	2 cut(s)	428, 1361
BsaAI	YACGTR	1 cut(s)	31
BsaHI	GRCGYC	1 cut(s)	213
BsaJI	CCNNGG	4 cut(s)	137, 166, 185, 843
BsaWI	WCCGGW	1 cut(s)	1113
Bse118I	RCCGGY	2 cut(s)	952, 1150
Bse1I	ACTGG	6 cut(s)	114, 575, 593, 824, 1162, 1316
BseBI	CCWGG	1 cut(s)	139
BseCI	ATCGAT	2 cut(s)	428, 1361
BseDI	CCNNGG	4 cut(s)	137, 166, 185, 843
BseGI	GGATG	5 cut(s)	81, 502, 616, 1001, 1201
BseMII	CTCAG	1 cut(s)	941
BseNI	ACTGG	6 cut(s)	114, 575, 593, 824, 1162, 1316
BseRI	GAGGAG	4 cut(s)	57, 137, 861, 915
BseSI	GKGCMC	1 cut(s)	116
BseXI	GCAGC	4 cut(s)	154, 632, 635, 638
Bsh1285I	CGRYCG	1 cut(s)	175
BshFI	GGCC	7 cut(s)	114, 129, 312, 330, 382, 693, 1183
BshNI	GGYRCC	2 cut(s)	212, 1314
BshVI	ATCGAT	2 cut(s)	428, 1361
BsiEI	CGRYCG	1 cut(s)	175
BsiHKAI	GWGCWC	2 cut(s)	871, 1257
BsiSI	CCGG	6 cut(s)	168, 185, 332, 953, 1114, 1151
BslFI	GGGAC	3 cut(s)	19, 280, 1211
BsmAI	GTCTC	1 cut(s)	470
BsmFI	GGGAC	3 cut(s)	19, 280, 1211
BsmI	GAATGC	1 cut(s)	736
BsnI	GGCC	7 cut(s)	114, 129, 312, 330, 382, 693, 1183
Bsp120I	GGGCCC	1 cut(s)	112
Bsp1286I	GDGCHC	3 cut(s)	116, 871, 1257
Bsp1407I	TGTACA	1 cut(s)	1198
Bsp143I	GATC	1 cut(s)	1294
BspANI	GGCC	7 cut(s)	114, 129, 312, 330, 382, 693, 1183
BspCNI	CTCAG	1 cut(s)	940
BspDI	ATCGAT	2 cut(s)	428, 1361
BspHI	TCATGA	1 cut(s)	876
BspLI	GGNNCC	5 cut(s)	114, 214, 296, 924, 1316
BspMI	ACCTGC	1 cut(s)	1178
BspPI	GGATC	1 cut(s)	1302
BspT107I	GGYRCC	2 cut(s)	212, 1314
BsrBI	CCGCTC	1 cut(s)	79
BsrFI	RCCGGY	2 cut(s)	952, 1150
BsrGI	TGTACA	1 cut(s)	1198
BsrI	ACTGG	6 cut(s)	114, 575, 593, 824, 1162, 1316
BssAI	RCCGGY	2 cut(s)	952, 1150
BssECI	CCNNGG	4 cut(s)	137, 166, 185, 843
BssMI	GATC	1 cut(s)	1294
BssNI	GRCGYC	1 cut(s)	213
BssT1I	CCWWGG	1 cut(s)	843
Bst2UI	CCWGG	1 cut(s)	139
Bst4CI	ACNGT	3 cut(s)	722, 1247, 1328
Bst6I	CTCTTC	1 cut(s)	735
BstACI	GRCGYC	1 cut(s)	213
BstAUI	TGTACA	1 cut(s)	1198
BstBAI	YACGTR	1 cut(s)	31
BstC8I	GCNNGC	3 cut(s)	1073, 1152, 1185
BstDEI	CTNAG	3 cut(s)	927, 1275, 1382
BstENI	CCTNNNNNAGG	1 cut(s)	930
BstF5I	GGATG	5 cut(s)	81, 502, 616, 1001, 1201
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	1 cut(s)	215
BstKTI	GATC	1 cut(s)	1297
BstMAI	GTCTC	1 cut(s)	470
BstMBI	GATC	1 cut(s)	1294
BstMCI	CGRYCG	1 cut(s)	175
BstMWI	GCNNNNNNNGC	3 cut(s)	559, 620, 626
BstNI	CCWGG	1 cut(s)	139
BstNSI	RCATGY	1 cut(s)	798
BstSCI	CCNGG	4 cut(s)	137, 166, 184, 330
BstSFI	CTRYAG	2 cut(s)	1246, 1320
BstSLI	GKGCMC	1 cut(s)	116
BstV1I	GCAGC	4 cut(s)	154, 632, 635, 638
BstV2I	GAAGAC	1 cut(s)	908
Bsu15I	ATCGAT	2 cut(s)	428, 1361
BsuRI	GGCC	7 cut(s)	114, 129, 312, 330, 382, 693, 1183
BsuTUI	ATCGAT	2 cut(s)	428, 1361
BtrI	CACGTC	2 cut(s)	100, 235
BtsCI	GGATG	5 cut(s)	81, 502, 616, 1001, 1201
BtsI	GCAGTG	1 cut(s)	694
BtsIMutI	CAGTG	4 cut(s)	694, 727, 747, 1243
BveI	ACCTGC	1 cut(s)	1178
Cac8I	GCNNGC	3 cut(s)	1073, 1152, 1185
CciI	TCATGA	1 cut(s)	876
CfoI	GCGC	1 cut(s)	215
Cfr10I	RCCGGY	2 cut(s)	952, 1150
Cfr13I	GGNCC	7 cut(s)	112, 113, 128, 294, 329, 653, 980
ClaI	ATCGAT	2 cut(s)	428, 1361
Csp6I	GTAC	6 cut(s)	419, 484, 529, 817, 1199, 1259
CviAII	CATG	8 cut(s)	269, 607, 774, 795, 877, 1002, 1375, 1396
CviQI	GTAC	6 cut(s)	419, 484, 529, 817, 1199, 1259
DdeI	CTNAG	3 cut(s)	927, 1275, 1382
DinI	GGCGCC	1 cut(s)	214
DpnI	GATC	1 cut(s)	1296
DpnII	GATC	1 cut(s)	1294
Eam1104I	CTCTTC	1 cut(s)	735
EarI	CTCTTC	1 cut(s)	735
EciI	GGCGGA	1 cut(s)	60
Ecl136II	GAGCTC	1 cut(s)	1255
Eco130I	CCWWGG	1 cut(s)	843
Eco147I	AGGCCT	2 cut(s)	312, 382
Eco24I	GRGCYC	2 cut(s)	116, 1257
Eco32I	GATATC	1 cut(s)	1342
Eco47I	GGWCC	3 cut(s)	294, 653, 980
Eco53kI	GAGCTC	1 cut(s)	1255
Eco57I	CTGAAG	1 cut(s)	1080
Eco72I	CACGTG	1 cut(s)	31
EcoICRI	GAGCTC	1 cut(s)	1255
EcoNI	CCTNNNNNAGG	1 cut(s)	930
EcoO109I	RGGNCCY	1 cut(s)	653
EcoRII	CCWGG	1 cut(s)	137
EcoRV	GATATC	1 cut(s)	1342
EcoT14I	CCWWGG	1 cut(s)	843
EcoT22I	ATGCAT	2 cut(s)	616, 796
EcoT38I	GRGCYC	2 cut(s)	116, 1257
EgeI	GGCGCC	1 cut(s)	214
EheI	GGCGCC	1 cut(s)	214
ErhI	CCWWGG	1 cut(s)	843
FaeI	CATG	8 cut(s)	272, 610, 777, 798, 880, 1005, 1378, 1399
FalI	AAGNNNNNCTT	6 cut(s)	248, 280, 842, 874, 1215, 1247
FaqI	GGGAC	3 cut(s)	19, 280, 1211
FatI	CATG	8 cut(s)	268, 606, 773, 794, 876, 1001, 1374, 1395
FblI	GTMKAC	2 cut(s)	175, 1323
Fnu4HI	GCNGC	7 cut(s)	74, 77, 143, 158, 621, 624, 627
FokI	GGATG	5 cut(s)	68, 509, 623, 1008, 1208
FriOI	GRGCYC	2 cut(s)	116, 1257
Fsp4HI	GCNGC	7 cut(s)	74, 77, 143, 158, 621, 624, 627
FspBI	CTAG	3 cut(s)	57, 384, 1026
GlaI	GCGC	1 cut(s)	214
GluI	GCNGC	7 cut(s)	74, 77, 143, 158, 621, 624, 627
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	7 cut(s)	114, 129, 312, 330, 382, 693, 1183
HapII	CCGG	6 cut(s)	168, 185, 332, 953, 1114, 1151
HhaI	GCGC	1 cut(s)	215
Hin1I	GRCGYC	1 cut(s)	213
Hin1II	CATG	8 cut(s)	272, 610, 777, 798, 880, 1005, 1378, 1399
Hin6I	GCGC	1 cut(s)	213
HinP1I	GCGC	1 cut(s)	213
HincII	GTYRAC	1 cut(s)	176
HindII	GTYRAC	1 cut(s)	176
HindIII	AAGCTT	2 cut(s)	942, 1062
HinfI	GANTC	5 cut(s)	12, 335, 456, 536, 1390
HpaII	CCGG	6 cut(s)	168, 185, 332, 953, 1114, 1151
HphI	GGTGA	3 cut(s)	229, 1097, 1103
Hpy166II	GTNNAC	3 cut(s)	176, 1111, 1324
Hpy188I	TCNGA	5 cut(s)	86, 321, 813, 1299, 1306
Hpy188III	TCNNGA	5 cut(s)	222, 877, 890, 933, 1193
Hpy8I	GTNNAC	3 cut(s)	176, 1111, 1324
Hpy99I	CGWCG	1 cut(s)	104
HpyCH4III	ACNGT	3 cut(s)	722, 1247, 1328
HpyCH4IV	ACGT	4 cut(s)	30, 99, 234, 364
HpyCH4V	TGCA	9 cut(s)	407, 434, 465, 514, 614, 736, 777, 794, 1237
HpyF10VI	GCNNNNNNNGC	3 cut(s)	559, 620, 626
HpyF3I	CTNAG	3 cut(s)	927, 1275, 1382
HpySE526I	ACGT	4 cut(s)	30, 99, 234, 364
Hsp92I	GRCGYC	1 cut(s)	213
Hsp92II	CATG	8 cut(s)	272, 610, 777, 798, 880, 1005, 1378, 1399
HspAI	GCGC	1 cut(s)	213
KasI	GGCGCC	1 cut(s)	212
KroI	GCCGGC	1 cut(s)	1150
KroNI	GCCGGC	1 cut(s)	1152
Kzo9I	GATC	1 cut(s)	1294
LmnI	GCTCC	4 cut(s)	150, 874, 928, 1047
Lsp1109I	GCAGC	4 cut(s)	154, 632, 635, 638
LweI	GCATC	7 cut(s)	601, 781, 986, 1045, 1246, 1353, 1367
MaeI	CTAG	3 cut(s)	57, 384, 1026
MaeII	ACGT	4 cut(s)	30, 99, 234, 364
MaeIII	GTNAC	3 cut(s)	16, 235, 1085
MalI	GATC	1 cut(s)	1296
MbiI	CCGCTC	1 cut(s)	79
MboI	GATC	1 cut(s)	1294
MboII	GAAGA	6 cut(s)	21, 202, 205, 720, 722, 913
MfeI	CAATTG	2 cut(s)	339, 1077
MhlI	GDGCHC	3 cut(s)	116, 871, 1257
MluCI	AATT	7 cut(s)	339, 444, 569, 659, 861, 1010, 1077
Mly113I	GGCGCC	1 cut(s)	213
MlyI	GAGTC	1 cut(s)	530
MmeI	TCCRAC	1 cut(s)	1367
Mph1103I	ATGCAT	2 cut(s)	616, 796
MroNI	GCCGGC	1 cut(s)	1150
MseI	TTAA	2 cut(s)	701, 860
MslI	CAYNNNNRTG	2 cut(s)	86, 881
MspI	CCGG	6 cut(s)	168, 185, 332, 953, 1114, 1151
MspR9I	CCNGG	4 cut(s)	139, 168, 186, 332
MunI	CAATTG	2 cut(s)	339, 1077
Mva1269I	GAATGC	1 cut(s)	736
MvaI	CCWGG	1 cut(s)	139
MwoI	GCNNNNNNNGC	3 cut(s)	559, 620, 626
NaeI	GCCGGC	1 cut(s)	1152
NarI	GGCGCC	1 cut(s)	213
NciI	CCSGG	3 cut(s)	168, 186, 332
NdeII	GATC	1 cut(s)	1294
NgoMIV	GCCGGC	1 cut(s)	1150
NlaIII	CATG	8 cut(s)	272, 610, 777, 798, 880, 1005, 1378, 1399
NlaIV	GGNNCC	5 cut(s)	114, 214, 296, 924, 1316
NmuCI	GTSAC	2 cut(s)	235, 1085
NsiI	ATGCAT	2 cut(s)	616, 796
NspI	RCATGY	1 cut(s)	798
PagI	TCATGA	1 cut(s)	876
PceI	AGGCCT	2 cut(s)	312, 382
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PctI	GAATGC	1 cut(s)	736
PdiI	GCCGGC	1 cut(s)	1152
PfeI	GAWTC	4 cut(s)	12, 335, 456, 1390
PkrI	GCNGC	7 cut(s)	75, 78, 144, 159, 622, 625, 628
PleI	GAGTC	1 cut(s)	530
PluTI	GGCGCC	1 cut(s)	216
PmaCI	CACGTG	1 cut(s)	31
PmlI	CACGTG	1 cut(s)	31
PpsI	GAGTC	1 cut(s)	530
Ppu21I	YACGTR	1 cut(s)	31
PpuMI	RGGWCCY	1 cut(s)	653
Psp124BI	GAGCTC	1 cut(s)	1257
Psp5II	RGGWCCY	1 cut(s)	653
Psp6I	CCWGG	1 cut(s)	137
PspCI	CACGTG	1 cut(s)	31
PspGI	CCWGG	1 cut(s)	137
PspN4I	GGNNCC	5 cut(s)	114, 214, 296, 924, 1316
PspOMI	GGGCCC	1 cut(s)	112
PspPI	GGNCC	7 cut(s)	112, 113, 128, 294, 329, 653, 980
PspPPI	RGGWCCY	1 cut(s)	653
RsaI	GTAC	6 cut(s)	420, 485, 530, 818, 1200, 1260
RsaNI	GTAC	6 cut(s)	419, 484, 529, 817, 1199, 1259
RseI	CAYNNNNRTG	2 cut(s)	86, 881
SacI	GAGCTC	1 cut(s)	1257
SalI	GTCGAC	1 cut(s)	174
SaqAI	TTAA	2 cut(s)	701, 860
SatI	GCNGC	7 cut(s)	74, 77, 143, 158, 621, 624, 627
Sau3AI	GATC	1 cut(s)	1294
Sau96I	GGNCC	7 cut(s)	112, 113, 128, 294, 329, 653, 980
SchI	GAGTC	1 cut(s)	530
ScrFI	CCNGG	4 cut(s)	139, 168, 186, 332
SduI	GDGCHC	3 cut(s)	116, 871, 1257
SfaNI	GCATC	7 cut(s)	601, 781, 986, 1045, 1246, 1353, 1367
SfcI	CTRYAG	2 cut(s)	1246, 1320
SfoI	GGCGCC	1 cut(s)	214
SinI	GGWCC	3 cut(s)	294, 653, 980
SmiMI	CAYNNNNRTG	2 cut(s)	86, 881
SmlI	CTYRAG	2 cut(s)	254, 1134
SmoI	CTYRAG	2 cut(s)	254, 1134
Sse9I	AATT	7 cut(s)	339, 444, 569, 659, 861, 1010, 1077
SseBI	AGGCCT	2 cut(s)	312, 382
SspDI	GGCGCC	1 cut(s)	212
SspI	AATATT	1 cut(s)	1270
SspMI	CTAG	3 cut(s)	57, 384, 1026
SstI	GAGCTC	1 cut(s)	1257
StuI	AGGCCT	2 cut(s)	312, 382
StyD4I	CCNGG	4 cut(s)	137, 166, 184, 330
StyI	CCWWGG	1 cut(s)	843
TaaI	ACNGT	3 cut(s)	722, 1247, 1328
TaiI	ACGT	4 cut(s)	33, 102, 237, 367
TaqI	TCGA	6 cut(s)	92, 175, 428, 459, 1140, 1361
TaqII	GACCGA	1 cut(s)	282
TasI	AATT	7 cut(s)	339, 444, 569, 659, 861, 1010, 1077
TatI	WGTACW	2 cut(s)	528, 1198
TauI	GCSGC	3 cut(s)	76, 79, 160
TfiI	GAWTC	4 cut(s)	12, 335, 456, 1390
Tru1I	TTAA	2 cut(s)	701, 860
Tru9I	TTAA	2 cut(s)	701, 860
TscAI	CASTG	4 cut(s)	694, 727, 754, 1250
TseFI	GTSAC	2 cut(s)	235, 1085
TseI	GCWGC	4 cut(s)	142, 620, 623, 626
Tsp45I	GTSAC	2 cut(s)	235, 1085
TspDTI	ATGAA	5 cut(s)	656, 663, 893, 1040, 1391
TspGWI	ACGGA	1 cut(s)	1034
TspRI	CASTG	4 cut(s)	694, 727, 754, 1250
VpaK11BI	GGWCC	3 cut(s)	294, 653, 980
XagI	CCTNNNNNAGG	1 cut(s)	930
XapI	RAATTY	1 cut(s)	444
XceI	RCATGY	1 cut(s)	798
XmiI	GTMKAC	2 cut(s)	175, 1323
XspI	CTAG	3 cut(s)	57, 384, 1026
Zsp2I	ATGCAT	2 cut(s)	616, 796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.