Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001833

Physical Location & Seq

Genomic Coordinates Reverse (-)

60415619 .. 60418144

Gene Structure 2526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26867

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGCGGAGAAGAATCATCCGCTTCTGCCACGCGTCACTCTGTACTCGCCAATACTCTAGCGCATCGGAAATCGCCGGACCGCCGCCGCTCATCCGAGTATCGAACCACGTGGCCAAATTGGGCCCACTGAAAGAAGGCCCAAAGCCCAGGCAGCTACTCTCCTTGCCGCCTTTTCCCGGTCGACATTTGCCGGGGAAGAAGAAGAAGAAGAAGAAGTCATACCAAGACGGCGTCGTTTCACGACCCTCACACGTCACCGCTGTCAGTTGGCTCAAGTGTTACTTCCATGAGATTGACGACACTGCCATTCGGTCCCATTTCAACAAAGGTCTTGTTCAGATGGAATGCCCAAGTTCAGTTCGGAAGGAAGGGCAAGTGAAACATATGAGAAAGATTAGGCCTAGTGAGGTAATGGAGGAAGGTGCAAGAGTATATGTGCCCGTATCGATTGCGGATAGTAAAGTTTCAAGGAGATTTGACTGCATACCGAGTGAGACATTGTACCCAAATGCGGATGAGATTGACTACTTGCAAAGGCTTGTCAAGTACAAGGACTCTGCTATAATAGTGCTGAACAAGCCCCCAAAATTGCCGGTTAAGGGTAATGTGCCAGTCCATAACAGCATGGATGCGTTGGCAGCAGCAGCGTTATCTTATGATTATGATGAAGGTCCTAAATTGGTTCATCGGCTTGATAGAGAGAGCAGTGGCCTCCTTTTAATAGGAAGAGCAAAAGAAAGTGCATCTCTTCTGCAGTCATTATACACTGACATCAACATTGGGAAATCATCGTGCAGGGCTTGGAATGATGCATGTAGAGCAAAATGTCAGAGGTACTGGGCATTGGTTATAGGGGTCACCCAAGGAAAAGGAAGGCTTAATTTGTGCTCCTCTTACGAAGAGAGGATCATCTTGGCTCATCAATCAGGATTAGAAGCTTCCCAACCGGCTCTAACTCAATATCGGGTGCTTGGTCCTACGATAAATGGATGCTCATGGATTGAATTACAACCACTCACTAGCCGAAAGCATCAGCTCCGTGTTCATTGTGCTGAAGCTCTAGGCACACCAATTGTGGGTGACTATAAATATGGGTGGTTTGTTCACCGGAGATGGAAACAAATGCCTCAAGTCGATATTGAGCCAGCAACTGGGCTACAATACAAGTTGCGGAGGCCAGCAGGTCTGGATGTACAGAAGGGAAGTGTTCTATCAAAAGTCCCTCTTTTACATCTACATTGTAGAGAGCTCGTACTCCCCAATATTGCTAAGTTCCTTGTTTTATTGGATCAGAAGTTAGACAACCAGCACCCTGTAGATAGTTCGAAGCCAGATGTCCTTCGGTTTGTGGCATCAATGCCAACCCACATGAAACTTAGTTGGAATCTCATGTCATCGTATTTGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016853 GO:0016866 GO:0031119 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

469

Amino Acids

52.85

Weight (kDa)

9.7

Isoelectric Point (pI)

53.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	188 - 351	7.2e-20	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78910 AT1G78910
fragaria_vesca	FvH4_5g04730 FvH4_5g04730 FvH4_5g04730 FvH4_5g04730
malus_domestica	MD06G1108500.v1.1
prunus_persica	Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1 Prupe.5G121100_v2.0.a1
pyrus_communis	pycom06g10190
rosa_chinensis	RchiOBHm_Chr1g0363621 RchiOBHm_Chr6g0299231 RchiOBHm_Chr7g0194671
rosa_laevigata	RLG00000004184 RLG00000011451
rosa_multiflora	Rmu_sc0000548.1_g000009 Rmu_sc0015513.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261180 Rroxscaffold_3G00261210 Rroxscaffold_7G00168890
rosa_rugosa	Rorug01G0308200 Rorug01G0308200 Rorug06G0286400 Rorug07G0016600 Rorug07G0016700
rosa_samantha	Rh1AG317100 Rh6CG412300 Rh6DG399000 Rh7BG144500 Rh7CG148400 Rh7DG145800
rosa_wichuraiana	Rw1G028120 Rw6G034810 Rw7G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1172
AccB7I	CCANNNNNTGG	1 cut(s)	1151
AccBSI	CCGCTC	1 cut(s)	88
AccI	GTMKAC	1 cut(s)	181
AccII	CGCG	1 cut(s)	32
AclWI	GGATC	2 cut(s)	914, 1296
AcoI	YGGCCR	1 cut(s)	111
AcuI	CTGAAG	1 cut(s)	1074
AcvI	CACGTG	1 cut(s)	109
AcyI	GRCGYC	1 cut(s)	231
AfaI	GTAC	6 cut(s)	43, 503, 548, 836, 1194, 1254
AfiI	CCNNNNNNNGG	5 cut(s)	176, 511, 599, 1076, 1151
AflIII	ACRYGT	2 cut(s)	30, 250
AgsI	TTSAA	3 cut(s)	322, 468, 1004
AjiI	CACGTC	1 cut(s)	253
AjnI	CCWGG	1 cut(s)	146
AluBI	AGCT	5 cut(s)	154, 938, 1036, 1058, 1249
AluI	AGCT	5 cut(s)	154, 938, 1036, 1058, 1249
Alw21I	GWGCWC	2 cut(s)	890, 1251
Alw26I	GTCTC	1 cut(s)	488
AlwI	GGATC	2 cut(s)	914, 1296
AlwNI	CAGNNNCTG	1 cut(s)	1151
AoxI	GGCC	6 cut(s)	111, 121, 136, 398, 709, 1175
ApaI	GGGCCC	1 cut(s)	125
ApeKI	GCWGC	4 cut(s)	151, 638, 641, 644
AspLEI	GCGC	1 cut(s)	62
AspS9I	GGNCC	7 cut(s)	77, 121, 122, 137, 312, 671, 974
AsuC2I	CCSGG	2 cut(s)	177, 192
AsuHPI	GGTGA	4 cut(s)	247, 850, 1091, 1097
AsuII	TTCGAA	1 cut(s)	1325
AvaII	GGWCC	4 cut(s)	77, 312, 671, 974
BaeGI	GKGCMC	2 cut(s)	125, 441
BalI	TGGCCA	1 cut(s)	113
BanII	GRGCYC	2 cut(s)	125, 1251
BarI	GAAGNNNNNNTAC	2 cut(s)	203, 235
BbrPI	CACGTG	1 cut(s)	109
Bbv12I	GWGCWC	2 cut(s)	890, 1251
BbvI	GCAGC	4 cut(s)	163, 650, 653, 656
BccI	CCATC	2 cut(s)	334, 1107
BceAI	ACGGC	1 cut(s)	244
BciT130I	CCWGG	1 cut(s)	148
BcnI	CCSGG	2 cut(s)	177, 192
BcoDI	GTCTC	1 cut(s)	488
BfaI	CTAG	4 cut(s)	57, 402, 1020, 1061
BfmI	CTRYAG	2 cut(s)	752, 1314
BfuAI	ACCTGC	1 cut(s)	1172
BisI	GCNGC	7 cut(s)	83, 86, 152, 167, 639, 642, 645
BlsI	GCNGC	7 cut(s)	84, 87, 153, 168, 640, 643, 646
Bme1390I	CCNGG	3 cut(s)	148, 177, 192
Bme18I	GGWCC	4 cut(s)	77, 312, 671, 974
BmgBI	CACGTC	1 cut(s)	253
BmgT120I	GGNCC	7 cut(s)	77, 121, 122, 137, 312, 671, 974
BmiI	GGNNCC	2 cut(s)	123, 314
BmrFI	CCNGG	3 cut(s)	148, 177, 192
BmrI	ACTGGG	2 cut(s)	847, 1161
BmsI	GCATC	7 cut(s)	71, 619, 752, 799, 980, 1039, 1361
BmuI	ACTGGG	2 cut(s)	847, 1161
Bpu14I	TTCGAA	1 cut(s)	1325
BpuEI	CTTGAG	2 cut(s)	257, 1113
BpuMI	CCSGG	2 cut(s)	177, 192
Bsa29I	ATCGAT	1 cut(s)	446
BsaAI	YACGTR	1 cut(s)	109
BsaHI	GRCGYC	1 cut(s)	231
BsaJI	CCNNGG	3 cut(s)	146, 191, 862
BsaWI	WCCGGW	1 cut(s)	1107
Bsc4I	CCNNNNNNNGG	5 cut(s)	176, 511, 599, 1076, 1151
Bse118I	RCCGGY	2 cut(s)	592, 946
Bse1I	ACTGG	3 cut(s)	611, 842, 1156
BseBI	CCWGG	1 cut(s)	148
BseCI	ATCGAT	1 cut(s)	446
BseDI	CCNNGG	3 cut(s)	146, 191, 862
BseGI	GGATG	6 cut(s)	15, 90, 520, 634, 995, 1195
BseLI	CCNNNNNNNGG	5 cut(s)	176, 511, 599, 1076, 1151
BseNI	ACTGG	3 cut(s)	611, 842, 1156
BseRI	GAGGAG	1 cut(s)	880
BseSI	GKGCMC	2 cut(s)	125, 441
BseXI	GCAGC	4 cut(s)	163, 650, 653, 656
BsgI	GTGCAG	1 cut(s)	814
Bsh1236I	CGCG	1 cut(s)	32
Bsh1285I	CGRYCG	1 cut(s)	181
BshFI	GGCC	6 cut(s)	113, 123, 138, 400, 711, 1177
BshVI	ATCGAT	1 cut(s)	446
BsiEI	CGRYCG	1 cut(s)	181
BsiHKAI	GWGCWC	2 cut(s)	890, 1251
BsiSI	CCGG	6 cut(s)	75, 177, 191, 593, 947, 1108
BslFI	GGGAC	2 cut(s)	298, 1205
BslI	CCNNNNNNNGG	5 cut(s)	176, 511, 599, 1076, 1151
BsmAI	GTCTC	1 cut(s)	488
BsmFI	GGGAC	2 cut(s)	298, 1205
BsmI	GAATGC	1 cut(s)	350
BsnI	GGCC	6 cut(s)	113, 123, 138, 400, 711, 1177
Bsp119I	TTCGAA	1 cut(s)	1325
Bsp120I	GGGCCC	1 cut(s)	121
Bsp1286I	GDGCHC	4 cut(s)	125, 441, 890, 1251
Bsp1407I	TGTACA	1 cut(s)	1192
Bsp143I	GATC	2 cut(s)	906, 1288
BspANI	GGCC	6 cut(s)	113, 123, 138, 400, 711, 1177
BspDI	ATCGAT	1 cut(s)	446
BspFNI	CGCG	1 cut(s)	32
BspLI	GGNNCC	2 cut(s)	123, 314
BspMAI	CTGCAG	1 cut(s)	756
BspMI	ACCTGC	1 cut(s)	1172
BspPI	GGATC	2 cut(s)	914, 1296
BspQI	GCTCTTC	1 cut(s)	721
BspT104I	TTCGAA	1 cut(s)	1325
BsrBI	CCGCTC	1 cut(s)	88
BsrFI	RCCGGY	2 cut(s)	592, 946
BsrGI	TGTACA	1 cut(s)	1192
BsrI	ACTGG	3 cut(s)	611, 842, 1156
BssAI	RCCGGY	2 cut(s)	592, 946
BssECI	CCNNGG	3 cut(s)	146, 191, 862
BssMI	GATC	2 cut(s)	906, 1288
BssNI	GRCGYC	1 cut(s)	231
BssT1I	CCWWGG	1 cut(s)	862
Bst2UI	CCWGG	1 cut(s)	148
Bst6I	CTCTTC	3 cut(s)	721, 753, 894
BstACI	GRCGYC	1 cut(s)	231
BstAUI	TGTACA	1 cut(s)	1192
BstBAI	YACGTR	1 cut(s)	109
BstBI	TTCGAA	1 cut(s)	1325
BstC8I	GCNNGC	2 cut(s)	1146, 1179
BstDEI	CTNAG	2 cut(s)	1269, 1376
BstEII	GGTNACC	1 cut(s)	856
BstF5I	GGATG	6 cut(s)	15, 90, 520, 634, 995, 1195
BstFNI	CGCG	1 cut(s)	32
BstHHI	GCGC	1 cut(s)	62
BstKTI	GATC	2 cut(s)	909, 1291
BstMAI	GTCTC	1 cut(s)	488
BstMBI	GATC	2 cut(s)	906, 1288
BstMCI	CGRYCG	1 cut(s)	181
BstMWI	GCNNNNNNNGC	5 cut(s)	151, 577, 638, 644, 818
BstNI	CCWGG	1 cut(s)	148
BstNSI	RCATGY	1 cut(s)	816
BstPI	GGTNACC	1 cut(s)	856
BstSCI	CCNGG	3 cut(s)	146, 175, 190
BstSFI	CTRYAG	2 cut(s)	752, 1314
BstSLI	GKGCMC	2 cut(s)	125, 441
BstUI	CGCG	1 cut(s)	32
BstV1I	GCAGC	4 cut(s)	163, 650, 653, 656
Bsu15I	ATCGAT	1 cut(s)	446
BsuRI	GGCC	6 cut(s)	113, 123, 138, 400, 711, 1177
BsuTUI	ATCGAT	1 cut(s)	446
BtrI	CACGTC	1 cut(s)	253
BtsCI	GGATG	6 cut(s)	15, 90, 520, 634, 995, 1195
BtsI	GCAGTG	2 cut(s)	300, 712
BtsIMutI	CAGTG	4 cut(s)	125, 300, 712, 765
BveI	ACCTGC	1 cut(s)	1172
Cac8I	GCNNGC	2 cut(s)	1146, 1179
CaiI	CAGNNNCTG	1 cut(s)	1151
CfoI	GCGC	1 cut(s)	62
Cfr10I	RCCGGY	2 cut(s)	592, 946
Cfr13I	GGNCC	7 cut(s)	77, 121, 122, 137, 312, 671, 974
ClaI	ATCGAT	1 cut(s)	446
CpoI	CGGWCCG	1 cut(s)	77
CseI	GACGC	2 cut(s)	21, 220
Csp6I	GTAC	6 cut(s)	42, 502, 547, 835, 1193, 1253
CspI	CGGWCCG	1 cut(s)	77
CviAII	CATG	6 cut(s)	287, 625, 813, 996, 1369, 1390
CviQI	GTAC	6 cut(s)	42, 502, 547, 835, 1193, 1253
DdeI	CTNAG	2 cut(s)	1269, 1376
DpnI	GATC	2 cut(s)	908, 1290
DpnII	GATC	2 cut(s)	906, 1288
EaeI	YGGCCR	1 cut(s)	111
Eam1104I	CTCTTC	3 cut(s)	721, 753, 894
EarI	CTCTTC	3 cut(s)	721, 753, 894
Ecl136II	GAGCTC	1 cut(s)	1249
Eco130I	CCWWGG	1 cut(s)	862
Eco147I	AGGCCT	1 cut(s)	400
Eco24I	GRGCYC	2 cut(s)	125, 1251
Eco47I	GGWCC	4 cut(s)	77, 312, 671, 974
Eco53kI	GAGCTC	1 cut(s)	1249
Eco57I	CTGAAG	1 cut(s)	1074
Eco72I	CACGTG	1 cut(s)	109
Eco91I	GGTNACC	1 cut(s)	856
EcoICRI	GAGCTC	1 cut(s)	1249
EcoO109I	RGGNCCY	1 cut(s)	671
EcoO65I	GGTNACC	1 cut(s)	856
EcoRII	CCWGG	1 cut(s)	146
EcoT14I	CCWWGG	1 cut(s)	862
EcoT22I	ATGCAT	1 cut(s)	814
EcoT38I	GRGCYC	2 cut(s)	125, 1251
ErhI	CCWWGG	1 cut(s)	862
FaeI	CATG	6 cut(s)	290, 628, 816, 999, 1372, 1393
FalI	AAGNNNNNCTT	6 cut(s)	266, 298, 861, 893, 1209, 1241
FaqI	GGGAC	2 cut(s)	298, 1205
FatI	CATG	6 cut(s)	286, 624, 812, 995, 1368, 1389
FauNDI	CATATG	1 cut(s)	384
FblI	GTMKAC	1 cut(s)	181
Fnu4HI	GCNGC	7 cut(s)	83, 86, 152, 167, 639, 642, 645
FokI	GGATG	6 cut(s)	2, 77, 527, 641, 1002, 1202
FriOI	GRGCYC	2 cut(s)	125, 1251
Fsp4HI	GCNGC	7 cut(s)	83, 86, 152, 167, 639, 642, 645
FspBI	CTAG	4 cut(s)	57, 402, 1020, 1061
GlaI	GCGC	1 cut(s)	61
GluI	GCNGC	7 cut(s)	83, 86, 152, 167, 639, 642, 645
HaeIII	GGCC	6 cut(s)	113, 123, 138, 400, 711, 1177
HapII	CCGG	6 cut(s)	75, 177, 191, 593, 947, 1108
HgaI	GACGC	2 cut(s)	21, 220
HhaI	GCGC	1 cut(s)	62
Hin1I	GRCGYC	1 cut(s)	231
Hin1II	CATG	6 cut(s)	290, 628, 816, 999, 1372, 1393
Hin6I	GCGC	1 cut(s)	60
HinP1I	GCGC	1 cut(s)	60
HincII	GTYRAC	1 cut(s)	182
HindII	GTYRAC	1 cut(s)	182
HindIII	AAGCTT	1 cut(s)	936
HinfI	GANTC	3 cut(s)	12, 554, 1384
HpaII	CCGG	6 cut(s)	75, 177, 191, 593, 947, 1108
HphI	GGTGA	4 cut(s)	247, 850, 1091, 1097
Hpy166II	GTNNAC	2 cut(s)	182, 1105
Hpy188I	TCNGA	6 cut(s)	67, 95, 339, 363, 831, 1293
Hpy188III	TCNNGA	3 cut(s)	240, 927, 1187
Hpy8I	GTNNAC	2 cut(s)	182, 1105
Hpy99I	CGWCG	1 cut(s)	236
HpyAV	CCTTC	8 cut(s)	128, 358, 362, 413, 662, 867, 1192, 1349
HpyCH4IV	ACGT	2 cut(s)	108, 252
HpyCH4V	TGCA	7 cut(s)	425, 483, 532, 743, 754, 795, 812
HpyF10VI	GCNNNNNNNGC	5 cut(s)	151, 577, 638, 644, 818
HpyF3I	CTNAG	2 cut(s)	1269, 1376
HpySE526I	ACGT	2 cut(s)	108, 252
Hsp92I	GRCGYC	1 cut(s)	231
Hsp92II	CATG	6 cut(s)	290, 628, 816, 999, 1372, 1393
HspAI	GCGC	1 cut(s)	60
Kzo9I	GATC	2 cut(s)	906, 1288
LguI	GCTCTTC	1 cut(s)	721
LmnI	GCTCC	2 cut(s)	893, 1041
Lsp1109I	GCAGC	4 cut(s)	163, 650, 653, 656
LweI	GCATC	7 cut(s)	71, 619, 752, 799, 980, 1039, 1361
MaeI	CTAG	4 cut(s)	57, 402, 1020, 1061
MaeII	ACGT	2 cut(s)	108, 252
MaeIII	GTNAC	5 cut(s)	33, 253, 278, 856, 1079
MalI	GATC	2 cut(s)	908, 1290
MbiI	CCGCTC	1 cut(s)	88
MboI	GATC	2 cut(s)	906, 1288
MfeI	CAATTG	1 cut(s)	1071
MhlI	GDGCHC	4 cut(s)	125, 441, 890, 1251
MlsI	TGGCCA	1 cut(s)	113
MluCI	AATT	6 cut(s)	116, 587, 677, 880, 1004, 1071
MluI	ACGCGT	1 cut(s)	30
MluNI	TGGCCA	1 cut(s)	113
MlyI	GAGTC	1 cut(s)	548
MmeI	TCCRAC	1 cut(s)	1361
Mox20I	TGGCCA	1 cut(s)	113
Mph1103I	ATGCAT	1 cut(s)	814
MscI	TGGCCA	1 cut(s)	113
MseI	TTAA	3 cut(s)	597, 719, 879
Msp20I	TGGCCA	1 cut(s)	113
MspA1I	CMGCKG	1 cut(s)	260
MspI	CCGG	6 cut(s)	75, 177, 191, 593, 947, 1108
MspR9I	CCNGG	3 cut(s)	148, 177, 192
MunI	CAATTG	1 cut(s)	1071
Mva1269I	GAATGC	1 cut(s)	350
MvaI	CCWGG	1 cut(s)	148
MvnI	CGCG	1 cut(s)	32
MwoI	GCNNNNNNNGC	5 cut(s)	151, 577, 638, 644, 818
NciI	CCSGG	2 cut(s)	177, 192
NdeI	CATATG	1 cut(s)	384
NdeII	GATC	2 cut(s)	906, 1288
NlaIII	CATG	6 cut(s)	290, 628, 816, 999, 1372, 1393
NlaIV	GGNNCC	2 cut(s)	123, 314
NmuCI	GTSAC	4 cut(s)	33, 253, 856, 1079
NsiI	ATGCAT	1 cut(s)	814
NspI	RCATGY	1 cut(s)	816
NspV	TTCGAA	1 cut(s)	1325
PceI	AGGCCT	1 cut(s)	400
PciSI	GCTCTTC	1 cut(s)	721
PctI	GAATGC	1 cut(s)	350
PfeI	GAWTC	2 cut(s)	12, 1384
PflFI	GACNNNGTC	1 cut(s)	230
PflMI	CCANNNNNTGG	1 cut(s)	1151
PkrI	GCNGC	7 cut(s)	84, 87, 153, 168, 640, 643, 646
PleI	GAGTC	1 cut(s)	548
PmaCI	CACGTG	1 cut(s)	109
PmlI	CACGTG	1 cut(s)	109
PpsI	GAGTC	1 cut(s)	548
Ppu21I	YACGTR	1 cut(s)	109
PpuMI	RGGWCCY	1 cut(s)	671
Psp124BI	GAGCTC	1 cut(s)	1251
Psp5II	RGGWCCY	1 cut(s)	671
Psp6I	CCWGG	1 cut(s)	146
PspCI	CACGTG	1 cut(s)	109
PspEI	GGTNACC	1 cut(s)	856
PspGI	CCWGG	1 cut(s)	146
PspN4I	GGNNCC	2 cut(s)	123, 314
PspOMI	GGGCCC	1 cut(s)	121
PspPI	GGNCC	7 cut(s)	77, 121, 122, 137, 312, 671, 974
PspPPI	RGGWCCY	1 cut(s)	671
PstI	CTGCAG	1 cut(s)	756
PstNI	CAGNNNCTG	1 cut(s)	1151
PsyI	GACNNNGTC	1 cut(s)	230
RsaI	GTAC	6 cut(s)	43, 503, 548, 836, 1194, 1254
RsaNI	GTAC	6 cut(s)	42, 502, 547, 835, 1193, 1253
Rsr2I	CGGWCCG	1 cut(s)	77
RsrII	CGGWCCG	1 cut(s)	77
SacI	GAGCTC	1 cut(s)	1251
SalI	GTCGAC	1 cut(s)	180
SapI	GCTCTTC	1 cut(s)	721
SaqAI	TTAA	3 cut(s)	597, 719, 879
SatI	GCNGC	7 cut(s)	83, 86, 152, 167, 639, 642, 645
Sau3AI	GATC	2 cut(s)	906, 1288
Sau96I	GGNCC	7 cut(s)	77, 121, 122, 137, 312, 671, 974
SchI	GAGTC	1 cut(s)	548
ScrFI	CCNGG	3 cut(s)	148, 177, 192
SduI	GDGCHC	4 cut(s)	125, 441, 890, 1251
SfaNI	GCATC	7 cut(s)	71, 619, 752, 799, 980, 1039, 1361
SfcI	CTRYAG	2 cut(s)	752, 1314
SfuI	TTCGAA	1 cut(s)	1325
SinI	GGWCC	4 cut(s)	77, 312, 671, 974
SmlI	CTYRAG	2 cut(s)	272, 1128
SmoI	CTYRAG	2 cut(s)	272, 1128
Sse9I	AATT	6 cut(s)	116, 587, 677, 880, 1004, 1071
SseBI	AGGCCT	1 cut(s)	400
SspI	AATATT	1 cut(s)	1264
SspMI	CTAG	4 cut(s)	57, 402, 1020, 1061
SstI	GAGCTC	1 cut(s)	1251
StuI	AGGCCT	1 cut(s)	400
StyD4I	CCNGG	3 cut(s)	146, 175, 190
StyI	CCWWGG	1 cut(s)	862
TaiI	ACGT	2 cut(s)	111, 255
TaqI	TCGA	5 cut(s)	101, 181, 446, 1134, 1325
TaqII	GACCGA	1 cut(s)	300
TasI	AATT	6 cut(s)	116, 587, 677, 880, 1004, 1071
TatI	WGTACW	3 cut(s)	41, 546, 1192
TauI	GCSGC	3 cut(s)	85, 88, 169
TfiI	GAWTC	2 cut(s)	12, 1384
Tru1I	TTAA	3 cut(s)	597, 719, 879
Tru9I	TTAA	3 cut(s)	597, 719, 879
TscAI	CASTG	4 cut(s)	132, 307, 712, 772
TseFI	GTSAC	4 cut(s)	33, 253, 856, 1079
TseI	GCWGC	4 cut(s)	151, 638, 641, 644
Tsp45I	GTSAC	4 cut(s)	33, 253, 856, 1079
TspDTI	ATGAA	4 cut(s)	674, 681, 1034, 1385
TspGWI	ACGGA	1 cut(s)	1028
TspRI	CASTG	4 cut(s)	132, 307, 712, 772
Tth111I	GACNNNGTC	1 cut(s)	230
Van91I	CCANNNNNTGG	1 cut(s)	1151
VpaK11BI	GGWCC	4 cut(s)	77, 312, 671, 974
XceI	RCATGY	1 cut(s)	816
XmiI	GTMKAC	1 cut(s)	181
XspI	CTAG	4 cut(s)	57, 402, 1020, 1061
Zsp2I	ATGCAT	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.