pycom06g18780

Belongs to the eIF-2B alpha beta delta subunits family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
22376670 .. 22379297
2628 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g18780.3

Sequence Viewer

Length: 1371 bp
ATGGAAGCGCGTCGCGTCTCCCGCACCGTGATCGACCCCAAGGTCCGCCAAGTCGGGTTCTTCACCCCCAACGCCGAAGCCCCACCCGGTCGGACCCAGTCCGGCCCGGCAATCCCAGCCCCTTCTCTATCCGAATCTCCGGCCAGCAACTCCCTCTATCCCGTCATGATCCCCCCGTCGCGTCATCTTTCCGACACCGTCGCGATCCGTACGGCTGCCGTGCCGGTGCCGGATTCGGCGTTGCGGCGCAAGGAATCCGTCGACGTGCCAGTGGGCAGCTATAATCCGTCGGAGTCGTTGTTAGGGACCTCGCCGGTGTCAGCCTCGCCTTCGAGTCGCGTTGGGGATGGACTCGAATTCTCCGATGAGTCCTCGGCCCTTTGGTGTCGGCGGAGTGGCTCCGGAAAGATGGCTTCGAGCTTGCCCGGCGGAGGATTCGAATCCGCCGCATCGAAGACGCCTGTTGAAGTTCCTGAAAAGAGTGGAGAGGCGGTTGCGGAATCGCAGAAAGAACTTCCGGCAAATGCAGAACCTTTGAAACCCAAGACCACAAAGGCCGAAAGACGTGCCTTGCAAGAGGCTCAACGCGCTGCAAAAGCCGCTGCTAAAGGTGAGGGGAAAAAACCTGCTGCTGTAACTGGGGGTGGCACTCCTGGTAAGACTGCTAAGTCTACAAAGCAAAAGAAGGATACTCCTCAAGTTGCAGCTTCGGTGGCTGCTTCTGATAAAAAAGGGGGTGATCGATCACCAGATAAGGAAAGGAAGAAAGATGTTCCTCCTCCACGTATGCAGTTTGATGATAAAAGCCGAGTGGAGAAGGCAAAAAGGCGTGCAGTGGTCAATCAAATCGAAGCTAAAAACAGAGTTGAATTGTTCCGGCATTTGCCTCAGTATGAGCGTGGAACTCAGCTTCCTGATCTTGAATCAAAAATTTTCCAACTCGATCCAATGCATCCTGCCATTTATAAGGTTGGACTGAAGTATTTAGCTGGAGAAATATCGGGTGGTAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAAGCCATTAGAGACTACTCCACACCACCAGAGAAAGTTCTTGTCAGAGATTTAACTGCAAAAGTCAGTAGTTATGTCTCATTTTTCACTCAATGCAGACCACTTTCAATTAGCATGGGAAATGCAGTTAGGTTTCTTAAGAGTCGTATTGCTAAATTGCCCTTGAGTCTTTCTGAGTCTGAAGCAAAATCTACACTTTGTTCAGAAATTGACCGCTTTATAAATGAGAAGATAATACTTGCTGATAAGGTGATAGTTAGGCACGCTTCTACAAAGGTTAGGGATGGAGATGTTCTTCTCACTTATGGATCGATCATGTGTTGTTGA

Protein Analysis

457

Amino Acids

49.06

Weight (kDa)

9.64

Isoelectric Point (pI)

50.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 966, 1265
AasI GACNNNNNNGTC 2 cut(s) 41, 667
Acc36I ACCTGC 1 cut(s) 634
AccB1I GGYRCC 1 cut(s) 226
AccI GTMKAC 2 cut(s) 261, 671
AccII CGCG 6 cut(s) 10, 15, 181, 203, 339, 588
AccIII TCCGGA 1 cut(s) 401
AclWI GGATC 4 cut(s) 163, 199, 938, 1360
AcoI YGGCCR 1 cut(s) 141
AcsI RAATTY 2 cut(s) 356, 930
AcuI CTGAAG 2 cut(s) 998, 1245
AcyI GRCGYC 1 cut(s) 458
AfaI GTAC 1 cut(s) 211
AfiI CCNNNNNNNGG 1 cut(s) 431
AflII CTTAAG 1 cut(s) 1181
AgsI TTSAA 7 cut(s) 467, 538, 869, 923, 1034, 1043, 1152
AjiI CACGTC 2 cut(s) 265, 566
AjnI CCWGG 1 cut(s) 652
AloI GAACNNNNNNTCC 2 cut(s) 895, 927
AluBI AGCT 6 cut(s) 279, 420, 707, 854, 910, 989
AluI AGCT 6 cut(s) 279, 420, 707, 854, 910, 989
Alw26I GTCTC 3 cut(s) 22, 1050, 1126
AlwI GGATC 4 cut(s) 163, 199, 938, 1360
Aor13HI TCCGGA 1 cut(s) 401
AoxI GGCC 4 cut(s) 103, 141, 375, 555
ApeKI GCWGC 7 cut(s) 215, 276, 590, 602, 629, 704, 716
ApoI RAATTY 2 cut(s) 356, 930
AspLEI GCGC 3 cut(s) 10, 249, 590
AspS9I GGNCC 5 cut(s) 43, 93, 104, 306, 376
AsuC2I CCSGG 3 cut(s) 87, 107, 426
AsuHPI GGTGA 5 cut(s) 55, 623, 738, 749, 1306
AsuII TTCGAA 1 cut(s) 438
AvaII GGWCC 3 cut(s) 43, 93, 306
BanI GGYRCC 1 cut(s) 226
BbsI GAAGAC 1 cut(s) 461
BbvI GCAGC 7 cut(s) 202, 288, 577, 589, 616, 703, 716
BccI CCATC 3 cut(s) 341, 403, 1322
BceAI ACGGC 2 cut(s) 203, 228
BcgI CGANNNNNNTGC 4 cut(s) 13, 47, 548, 582
BciT130I CCWGG 1 cut(s) 654
BciVI GTATCC 1 cut(s) 682
BcnI CCSGG 3 cut(s) 87, 107, 426
BcoDI GTCTC 3 cut(s) 22, 1050, 1126
BfrI CTTAAG 1 cut(s) 1181
BfuAI ACCTGC 1 cut(s) 634
BfuI GTATCC 1 cut(s) 682
Bme1390I CCNGG 4 cut(s) 87, 107, 426, 654
Bme18I GGWCC 3 cut(s) 43, 93, 306
BmgBI CACGTC 2 cut(s) 265, 566
BmgT120I GGNCC 5 cut(s) 43, 93, 104, 306, 376
BmiI GGNNCC 4 cut(s) 95, 228, 307, 400
BmrFI CCNGG 4 cut(s) 87, 107, 426, 654
BmrI ACTGGG 2 cut(s) 91, 648
BmsI GCATC 2 cut(s) 458, 961
BmuI ACTGGG 2 cut(s) 91, 648
BpiI GAAGAC 1 cut(s) 461
BpmI CTGGAG 1 cut(s) 1011
Bpu14I TTCGAA 1 cut(s) 438
BpuEI CTTGAG 2 cut(s) 681, 1228
BpuMI CCSGG 3 cut(s) 87, 107, 426
Bsa29I ATCGAT 2 cut(s) 742, 1355
BsaAI YACGTR 1 cut(s) 785
BsaBI GATNNNNATC 1 cut(s) 439
BsaHI GRCGYC 1 cut(s) 458
BsaJI CCNNGG 2 cut(s) 39, 372
BsaWI WCCGGW 1 cut(s) 401
BsaXI ACNNNNNCTCC 4 cut(s) 284, 314, 477, 507
Bsc4I CCNNNNNNNGG 1 cut(s) 431
Bse118I RCCGGY 2 cut(s) 223, 313
Bse1I ACTGG 3 cut(s) 97, 269, 643
Bse3DI GCAATG 1 cut(s) 1032
Bse8I GATNNNNATC 1 cut(s) 439
BseAI TCCGGA 1 cut(s) 401
BseBI CCWGG 1 cut(s) 654
BseCI ATCGAT 2 cut(s) 742, 1355
BseDI CCNNGG 2 cut(s) 39, 372
BseGI GGATG 3 cut(s) 352, 952, 1333
BseJI GATNNNNATC 1 cut(s) 439
BseLI CCNNNNNNNGG 1 cut(s) 431
BseMI GCAATG 1 cut(s) 1032
BseMII CTCAG 3 cut(s) 902, 920, 1209
BseNI ACTGG 3 cut(s) 97, 269, 643
BseRI GAGGAG 2 cut(s) 684, 768
BseXI GCAGC 7 cut(s) 202, 288, 577, 589, 616, 703, 716
BseYI CCCAGC 1 cut(s) 115
BsgI GTGCAG 1 cut(s) 852
Bsh1236I CGCG 6 cut(s) 10, 15, 181, 203, 339, 588
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 4 cut(s) 105, 143, 377, 557
BshNI GGYRCC 1 cut(s) 226
BshVI ATCGAT 2 cut(s) 742, 1355
BsiEI CGRYCG 1 cut(s) 91
BsiWI CGTACG 1 cut(s) 209
BslFI GGGAC 1 cut(s) 319
BslI CCNNNNNNNGG 1 cut(s) 431
BsmAI GTCTC 3 cut(s) 22, 1050, 1126
BsmBI CGTCTC 1 cut(s) 22
BsmFI GGGAC 1 cut(s) 319
BsnI GGCC 4 cut(s) 105, 143, 377, 557
Bsp119I TTCGAA 1 cut(s) 438
Bsp13I TCCGGA 1 cut(s) 401
Bsp143I GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
Bsp68I TCGCGA 1 cut(s) 203
BspANI GGCC 4 cut(s) 105, 143, 377, 557
BspCNI CTCAG 3 cut(s) 901, 919, 1210
BspDI ATCGAT 2 cut(s) 742, 1355
BspEI TCCGGA 1 cut(s) 401
BspFNI CGCG 6 cut(s) 10, 15, 181, 203, 339, 588
BspHI TCATGA 1 cut(s) 165
BspLI GGNNCC 4 cut(s) 95, 228, 307, 400
BspMI ACCTGC 1 cut(s) 634
BspPI GGATC 4 cut(s) 163, 199, 938, 1360
BspT104I TTCGAA 1 cut(s) 438
BspT107I GGYRCC 1 cut(s) 226
BspTI CTTAAG 1 cut(s) 1181
BsrDI GCAATG 1 cut(s) 1032
BsrFI RCCGGY 2 cut(s) 223, 313
BsrI ACTGG 3 cut(s) 97, 269, 643
BssAI RCCGGY 2 cut(s) 223, 313
BssECI CCNNGG 2 cut(s) 39, 372
BssMI GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
BssNI GRCGYC 1 cut(s) 458
BssT1I CCWWGG 1 cut(s) 39
Bst2UI CCWGG 1 cut(s) 654
Bst4CI ACNGT 2 cut(s) 28, 199
BstACI GRCGYC 1 cut(s) 458
BstAFI CTTAAG 1 cut(s) 1181
BstBAI YACGTR 1 cut(s) 785
BstBI TTCGAA 1 cut(s) 438
BstC8I GCNNGC 4 cut(s) 145, 422, 831, 1308
BstDEI CTNAG 4 cut(s) 666, 888, 906, 1218
BstF5I GGATG 3 cut(s) 352, 952, 1333
BstFNI CGCG 6 cut(s) 10, 15, 181, 203, 339, 588
BstHHI GCGC 3 cut(s) 10, 249, 590
BstKTI GATC 9 cut(s) 33, 171, 207, 742, 746, 919, 946, 1355, 1359
BstMAI GTCTC 3 cut(s) 22, 1050, 1126
BstMBI GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 7 cut(s) 21, 116, 426, 587, 596, 599, 713
BstNI CCWGG 1 cut(s) 654
BstSCI CCNGG 4 cut(s) 85, 105, 424, 652
BstUI CGCG 6 cut(s) 10, 15, 181, 203, 339, 588
BstV1I GCAGC 7 cut(s) 202, 288, 577, 589, 616, 703, 716
BstV2I GAAGAC 1 cut(s) 461
Bsu15I ATCGAT 2 cut(s) 742, 1355
BsuI GTATCC 1 cut(s) 682
BsuRI GGCC 4 cut(s) 105, 143, 377, 557
BsuTUI ATCGAT 2 cut(s) 742, 1355
BtrI CACGTC 2 cut(s) 265, 566
BtsCI GGATG 3 cut(s) 352, 952, 1333
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 2 cut(s) 276, 840
BtuMI TCGCGA 1 cut(s) 203
BveI ACCTGC 1 cut(s) 634
Cac8I GCNNGC 4 cut(s) 145, 422, 831, 1308
CciI TCATGA 1 cut(s) 165
CfoI GCGC 3 cut(s) 10, 249, 590
Cfr10I RCCGGY 2 cut(s) 223, 313
Cfr13I GGNCC 5 cut(s) 43, 93, 104, 306, 376
ClaI ATCGAT 2 cut(s) 742, 1355
CseI GACGC 3 cut(s) 4, 170, 466
Csp6I GTAC 1 cut(s) 210
CviAII CATG 3 cut(s) 166, 1159, 1360
CviQI GTAC 1 cut(s) 210
DdeI CTNAG 4 cut(s) 666, 888, 906, 1218
DpnI GATC 9 cut(s) 32, 170, 206, 741, 745, 918, 945, 1354, 1358
DpnII GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
DrdI GACNNNNNNGTC 2 cut(s) 41, 667
DseDI GACNNNNNNGTC 2 cut(s) 41, 667
EaeI YGGCCR 1 cut(s) 141
EciI GGCGGA 4 cut(s) 35, 406, 433, 444
Eco130I CCWWGG 1 cut(s) 39
Eco47I GGWCC 3 cut(s) 43, 93, 306
Eco57I CTGAAG 2 cut(s) 998, 1245
EcoO109I RGGNCCY 1 cut(s) 306
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 652
EcoT14I CCWWGG 1 cut(s) 39
EcoT22I ATGCAT 1 cut(s) 954
ErhI CCWWGG 1 cut(s) 39
Esp3I CGTCTC 1 cut(s) 22
FaeI CATG 3 cut(s) 169, 1162, 1363
FaqI GGGAC 1 cut(s) 319
FatI CATG 3 cut(s) 165, 1158, 1359
FauI CCCGC 1 cut(s) 29
FblI GTMKAC 2 cut(s) 261, 671
FokI GGATG 3 cut(s) 359, 939, 1340
GlaI GCGC 3 cut(s) 9, 248, 589
GsaI CCCAGC 1 cut(s) 119
GsuI CTGGAG 1 cut(s) 1011
HaeIII GGCC 4 cut(s) 105, 143, 377, 557
HgaI GACGC 3 cut(s) 4, 170, 466
HhaI GCGC 3 cut(s) 10, 249, 590
Hin1I GRCGYC 1 cut(s) 458
Hin1II CATG 3 cut(s) 169, 1162, 1363
Hin6I GCGC 3 cut(s) 8, 247, 588
HinP1I GCGC 3 cut(s) 8, 247, 588
HincII GTYRAC 1 cut(s) 262
HindII GTYRAC 1 cut(s) 262
HphI GGTGA 5 cut(s) 55, 623, 738, 749, 1306
Hpy166II GTNNAC 2 cut(s) 262, 672
Hpy188III TCNNGA 7 cut(s) 166, 202, 402, 473, 914, 920, 1043
Hpy8I GTNNAC 2 cut(s) 262, 672
Hpy99I CGWCG 6 cut(s) 15, 181, 203, 263, 266, 292
HpyAV CCTTC 4 cut(s) 132, 339, 679, 811
HpyCH4III ACNGT 2 cut(s) 28, 199
HpyCH4IV ACGT 3 cut(s) 264, 565, 784
HpyF10VI GCNNNNNNNGC 7 cut(s) 21, 116, 426, 587, 596, 599, 713
HpyF3I CTNAG 4 cut(s) 666, 888, 906, 1218
HpySE526I ACGT 3 cut(s) 264, 565, 784
Hsp92I GRCGYC 1 cut(s) 458
Hsp92II CATG 3 cut(s) 169, 1162, 1363
HspAI GCGC 3 cut(s) 8, 247, 588
Kpn2I TCCGGA 1 cut(s) 401
Kzo9I GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
LmnI GCTCC 1 cut(s) 404
Lsp1109I GCAGC 7 cut(s) 202, 288, 577, 589, 616, 703, 716
LweI GCATC 2 cut(s) 458, 961
MaeII ACGT 3 cut(s) 264, 565, 784
MaeIII GTNAC 1 cut(s) 634
MalI GATC 9 cut(s) 32, 170, 206, 741, 745, 918, 945, 1354, 1358
MboI GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
MboII GAAGA 5 cut(s) 52, 466, 775, 1285, 1331
MluCI AATT 6 cut(s) 356, 869, 930, 1152, 1199, 1251
MlyI GAGTC 7 cut(s) 302, 343, 345, 377, 1195, 1219, 1229
MmeI TCCRAC 5 cut(s) 71, 216, 270, 952, 961
Mph1103I ATGCAT 1 cut(s) 954
MroI TCCGGA 1 cut(s) 401
MseI TTAA 2 cut(s) 1097, 1182
MspA1I CMGCKG 1 cut(s) 602
MspCI CTTAAG 1 cut(s) 1181
MspR9I CCNGG 4 cut(s) 87, 107, 426, 654
MvaI CCWGG 1 cut(s) 654
MvnI CGCG 6 cut(s) 10, 15, 181, 203, 339, 588
MwoI GCNNNNNNNGC 7 cut(s) 21, 116, 426, 587, 596, 599, 713
NciI CCSGG 3 cut(s) 87, 107, 426
NdeII GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
NlaIII CATG 3 cut(s) 169, 1162, 1363
NlaIV GGNNCC 4 cut(s) 95, 228, 307, 400
NmeAIII GCCGAG 2 cut(s) 353, 833
NruI TCGCGA 1 cut(s) 203
NsiI ATGCAT 1 cut(s) 954
NspV TTCGAA 1 cut(s) 438
PagI TCATGA 1 cut(s) 165
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PfeI GAWTC 7 cut(s) 134, 233, 254, 435, 440, 500, 923
Pfl23II CGTACG 1 cut(s) 209
PflFI GACNNNGTC 2 cut(s) 97, 197
PleI GAGTC 7 cut(s) 301, 342, 345, 376, 1194, 1218, 1228
PpsI GAGTC 7 cut(s) 301, 342, 345, 376, 1194, 1218, 1228
Ppu21I YACGTR 1 cut(s) 785
PpuMI RGGWCCY 1 cut(s) 306
PsiI TTATAA 2 cut(s) 966, 1265
Psp5II RGGWCCY 1 cut(s) 306
Psp6I CCWGG 1 cut(s) 652
PspFI CCCAGC 1 cut(s) 115
PspGI CCWGG 1 cut(s) 652
PspLI CGTACG 1 cut(s) 209
PspN4I GGNNCC 4 cut(s) 95, 228, 307, 400
PspPI GGNCC 5 cut(s) 43, 93, 104, 306, 376
PspPPI RGGWCCY 1 cut(s) 306
PsyI GACNNNGTC 2 cut(s) 97, 197
RruI TCGCGA 1 cut(s) 203
RsaI GTAC 1 cut(s) 211
RsaNI GTAC 1 cut(s) 210
SalI GTCGAC 1 cut(s) 260
SaqAI TTAA 2 cut(s) 1097, 1182
Sau3AI GATC 9 cut(s) 30, 168, 204, 739, 743, 916, 943, 1352, 1356
Sau96I GGNCC 5 cut(s) 43, 93, 104, 306, 376
SchI GAGTC 7 cut(s) 302, 343, 345, 377, 1195, 1219, 1229
ScrFI CCNGG 4 cut(s) 87, 107, 426, 654
SfaNI GCATC 2 cut(s) 458, 961
SfuI TTCGAA 1 cut(s) 438
SgrAI CRCCGGYG 1 cut(s) 313
SgrDI CGTCGACG 1 cut(s) 260
SinI GGWCC 3 cut(s) 43, 93, 306
SmlI CTYRAG 3 cut(s) 696, 1181, 1207
SmoI CTYRAG 3 cut(s) 696, 1181, 1207
Sse9I AATT 6 cut(s) 356, 869, 930, 1152, 1199, 1251
StyD4I CCNGG 4 cut(s) 85, 105, 424, 652
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 2 cut(s) 28, 199
TaiI ACGT 3 cut(s) 267, 568, 787
TasI AATT 6 cut(s) 356, 869, 930, 1152, 1199, 1251
TauI GCSGC 3 cut(s) 247, 449, 602
TfiI GAWTC 7 cut(s) 134, 233, 254, 435, 440, 500, 923
Tru1I TTAA 2 cut(s) 1097, 1182
Tru9I TTAA 2 cut(s) 1097, 1182
TscAI CASTG 2 cut(s) 276, 840
TseI GCWGC 7 cut(s) 215, 276, 590, 602, 629, 704, 716
TspGWI ACGGA 3 cut(s) 197, 247, 276
TspRI CASTG 2 cut(s) 276, 840
Tth111I GACNNNGTC 2 cut(s) 97, 197
Vha464I CTTAAG 1 cut(s) 1181
VpaK11BI GGWCC 3 cut(s) 43, 93, 306
XapI RAATTY 2 cut(s) 356, 930
XmiI GTMKAC 2 cut(s) 261, 671
Zsp2I ATGCAT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.