Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004613

Physical Location & Seq

Genomic Coordinates Reverse (-)

4979497 .. 4983494

Gene Structure 3998 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16456

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGACGCGCGTCGCGCTTCCCGAACCGTGATCGACCCGAAGGTCCGCCAGGTCGGCTTCTTCACTCCCATCCCCGCCGAGCCCTTACCGGTTCGGACCCAATCCGGACCCGCAGTCCCAACCTCCTCTGTTCCTCTCTCCGAATCTCCAGCCGGCAACTCACTCTCTCCCGTCATGATCCCCCCCTCGCGTCACCTTTCAGACACCGTCGCGATCCGCACGGCCGCCGTGCCGGTTCCGGAATCGGCGATGCGGCGGATGGATTCCGGCGAGCAAGTGCCGGTGGGGAGTTACAACCCGTCGGAGTCGTTGTTAGGGTCCTCTCCGGTGGCCTCGTCGCCGTCGAGCAGGGTCGAGGATGGGACTCTGGGGTTCTCGGAGGAGAACTCCTCGGTCCAGTGGTACCGGCGAAGCGGCTCCGGCAAGATGGCCTCGAGTTTGCCCGGCGGAGGATTTGAATCCGCCGCTTTGAGAACGCCTCTTGAAGTTCCAGAAAAAAGTGCAGAGGTGGTTCCGAAAGCGCAGAATGAAGTTCCTACAAGTTCAGAACAGTCGAAAGCTAGGCCGACTAAGGCCGAAAGGCGTGCCCTGCAGGAGGCTCAACGTGCTGCGAAAGCCGCTGCCAAAGCTGAGGGAAGAAAACCTACCCCTGTATCTGGAGGAGGAGCTACGAGTAAACCTGTAAAGCAGTCTTCCCAAAAGAAAGAGATGCAAAAGAAAGATACTCCTGGCGTTGCATCTTCAGTGGTTGCTTCTGACAAGAAGGGTGGTGATCGACCAACAGATAGGAGGAAAGATGTTCCTCCTCCACGTATGCAGTTTGATGATAAGAGCCGAGTGGAAAAGGCAAAAAGGCGTGCTGTGGTCAATCAAACAGAAGCTAAAAACAGAGTTGAATTGTTCCGGCATTTGCCTCAATATGAACGGGGAACTCAGCTTCCAGATCTCGAGTCAAAGTTTTTTCAACTTGATCCCATGCATCCTGCCATTTATAAGGTTGGACTGAAGTATTTGGCTGGGGATATATCGGGGGGTAATGCTCGTTGTATTGCGATGCTTAACGCATTTCAGGAAGCCATTAGAGACTACTCTACGCCACCAGAGAAAACTCTTGTTCGAGATTTAACAGCAAAAATCAGTAGTTACGTCTCATTTTTTATAGAATGCAGGCCACTTTCTATTAGCATGGGAAATGCAGTTAGGTTTATAAAGAGTCGTGTTGCGAAATTGCCATTGAGCCTTTCCGAATCTGAAGCTAAATCCACGCTTTGTTCAGAAATTGACCGATTTATAAATGACAAGATAATTATTGCTGATAAGGTGATAGTTAGGCATGCTGCTACAAAGATTAGGGATGGTGATGTTCTACTCACATATGGATCATCATGTGTTGTTGAGATGATTTTTCTACACGCCCATGAACTCGGGAAACAGTTTCGTGTTGTGATTGTAGACTCGCGTCCAAAGCTTGAAGGCCAAGCATTACTTCATAGGCTGGTAGCAAAGGGCCTGACTTGTACATATACTCATATAAATGCCGTGTCTTATATCATGCATGAAGTAACACGAGTGTTTTTGGGAGCTGCCTCGGTGTTATCTAATGGAACTGTATATTCGAGAGTTGGCACTGCATGTGTTGCTATGGTTGCTCATGCATTTTGCGTTCCAGTCTTAGTGTGCTGTGAAGCGTACAAGTTTCATGAAAGAGTACAGCTTGATTCCATTTGCTCTAACGAACTAGGTGATCCAGATGCTATTGCAAAAGTTTCTGGAAGAACTGATATAAACTATCTGGAAAATTGGGCAAATAAGGAAAATCTGCAACTTCTGAATTTAATGTATGATGCTACGCCAGCGGATTATGTCTCCATGATTGTCACTGATTATGGCATGATTCCACCCACCAGCGTGCCCGTCATTGTACGGGAATATGGCAGAGAACACCTGTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001541 GO:0002253 GO:0002376 GO:0002429 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007272 GO:0007275 GO:0007399 GO:0007417 GO:0007548 GO:0008150 GO:0008152 GO:0008366 GO:0008406 GO:0008585 GO:0009058 GO:0009059 GO:0009987 GO:0010001 GO:0010467 GO:0014003 GO:0019538 GO:0021782 GO:0022008 GO:0022414 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034645 GO:0042063 GO:0042552 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045137 GO:0046545 GO:0046660 GO:0048468 GO:0048513 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048709 GO:0048731 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050851 GO:0050852 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

IF-2B

Protein Analysis

650

Amino Acids

70.9

Weight (kDa)

9.2

Isoelectric Point (pI)

48.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IF-2B	PF01008	342 - 634	7.5e-78	Initiation factor 2 subunit family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48970 AT1G48970
fragaria_vesca	FvH4_3g05690 FvH4_5g12800 FvH4_5g12800
malus_domestica	MD06G1210100.v1.1 MD14G1221000.v1.1
prunus_persica	Prupe.5G216300_v2.0.a1
pyrus_communis	pycom06g18780 pycom14g18290
rosa_chinensis	RchiOBHm_Chr4g0426391 RchiOBHm_Chr7g0184441
rosa_laevigata	RLG00000004975 RLG00000007298
rosa_multiflora	Rmu_sc0001557.1_g000016 Rmu_sc0006158.1_g000003 Rmu_sc0006158.1_g000004 Rmu_sc0007942.1_g000006
rosa_roxburghii	Rroxscaffold_3G00269610 Rroxscaffold_5G00368400
rosa_rugosa	Rorug04G0210500
rosa_samantha	Rh3DG253600 Rh4BG273600 Rh4CG287800 Rh4CG287900 Rh4DG270400 Rh7AG079900 Rh7BG067300 Rh7CG067600 Rh7DG067300
rosa_wichuraiana	Rw7G005540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	993, 1208, 1292
AasI	GACNNNNNNGTC	1 cut(s)	41
Acc65I	GGTACC	1 cut(s)	402
AccB1I	GGYRCC	1 cut(s)	402
AccI	GTMKAC	1 cut(s)	1452
AccII	CGCG	6 cut(s)	8, 10, 15, 190, 212, 1459
AccIII	TCCGGA	2 cut(s)	104, 238
AclWI	GGATC	5 cut(s)	172, 208, 965, 1387, 1739
AcoI	YGGCCR	1 cut(s)	222
AcsI	RAATTY	1 cut(s)	1831
AcuI	CTGAAG	3 cut(s)	726, 1025, 1272
AfaI	GTAC	5 cut(s)	404, 1519, 1691, 1710, 1923
AfiI	CCNNNNNNNGG	3 cut(s)	449, 595, 656
AgeI	ACCGGT	1 cut(s)	88
AgsI	TTSAA	5 cut(s)	458, 485, 896, 965, 1472
AhdI	GACNNNNNGTC	1 cut(s)	113
AjnI	CCWGG	2 cut(s)	48, 727
AjuI	GAANNNNNNNTTGG	2 cut(s)	1470, 1502
AleI	CACNNNNGTG	1 cut(s)	1907
AloI	GAACNNNNNNTCC	2 cut(s)	922, 954
AluBI	AGCT	9 cut(s)	560, 629, 668, 881, 937, 1256, 1468, 1583, 1714
AluI	AGCT	9 cut(s)	560, 629, 668, 881, 937, 1256, 1468, 1583, 1714
Alw26I	GTCTC	3 cut(s)	1077, 1153, 1870
AlwI	GGATC	5 cut(s)	172, 208, 965, 1387, 1739
Ama87I	CYCGRG	3 cut(s)	433, 947, 1424
Aor13HI	TCCGGA	2 cut(s)	104, 238
AoxI	GGCC	8 cut(s)	222, 330, 429, 563, 573, 1169, 1474, 1507
ApeKI	GCWGC	4 cut(s)	608, 620, 1337, 1583
ApoI	RAATTY	1 cut(s)	1831
AsiGI	ACCGGT	1 cut(s)	88
Asp718I	GGTACC	1 cut(s)	402
AspLEI	GCGC	3 cut(s)	10, 17, 523
AspS9I	GGNCC	6 cut(s)	43, 96, 107, 318, 394, 1507
AsuC2I	CCSGG	1 cut(s)	444
AsuHPI	GGTGA	5 cut(s)	185, 782, 1333, 1370, 1754
AvaI	CYCGRG	3 cut(s)	433, 947, 1424
AvaII	GGWCC	5 cut(s)	43, 96, 107, 318, 394
BaeGI	GKGCMC	2 cut(s)	589, 1914
BaeI	ACNNNNGTAYC	2 cut(s)	636, 669
BanI	GGYRCC	1 cut(s)	402
BanII	GRGCYC	1 cut(s)	84
BarI	GAAGNNNNNNTAC	2 cut(s)	628, 660
BauI	CACGAG	1 cut(s)	1566
BbsI	GAAGAC	1 cut(s)	684
BbvCI	CCTCAGC	1 cut(s)	630
BbvI	GCAGC	4 cut(s)	595, 607, 1324, 1570
BccI	CCATC	5 cut(s)	77, 253, 353, 421, 1349
BceAI	ACGGC	4 cut(s)	212, 237, 325, 1523
BcgI	CGANNNNNNTGC	2 cut(s)	566, 600
BciT130I	CCWGG	2 cut(s)	50, 729
BcnI	CCSGG	1 cut(s)	444
BcoDI	GTCTC	3 cut(s)	1077, 1153, 1870
BfaI	CTAG	2 cut(s)	561, 1739
BfmI	CTRYAG	1 cut(s)	590
BglI	GCCNNNNNGGC	1 cut(s)	54
BglII	AGATCT	1 cut(s)	943
BisI	GCNGC	9 cut(s)	225, 254, 415, 465, 609, 618, 621, 1338, 1584
BlsI	GCNGC	9 cut(s)	226, 255, 416, 466, 610, 619, 622, 1339, 1585
Bme1390I	CCNGG	3 cut(s)	50, 444, 729
Bme18I	GGWCC	5 cut(s)	43, 96, 107, 318, 394
BmeRI	GACNNNNNGTC	1 cut(s)	113
BmeT110I	CYCGRG	3 cut(s)	433, 947, 1424
BmgT120I	GGNCC	6 cut(s)	43, 96, 107, 318, 394, 1507
BmiI	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
BmrFI	CCNGG	3 cut(s)	50, 444, 729
BmsI	GCATC	7 cut(s)	240, 699, 746, 988, 1044, 1741, 1834
BoxI	GACNNNNGTC	2 cut(s)	9, 1458
BpiI	GAAGAC	1 cut(s)	684
BplI	GAGNNNNNCTC	6 cut(s)	371, 403, 374, 406, 463, 495
BpmI	CTGGAG	2 cut(s)	132, 678
Bpu10I	CCTNAGC	1 cut(s)	630
BpuMI	CCSGG	1 cut(s)	444
BsaAI	YACGTR	1 cut(s)	812
BsaBI	GATNNNNATC	1 cut(s)	457
BsaJI	CCNNGG	2 cut(s)	390, 1587
BsaWI	WCCGGW	4 cut(s)	88, 104, 238, 325
BsaXI	ACNNNNNCTCC	2 cut(s)	296, 326
Bsc4I	CCNNNNNNNGG	3 cut(s)	449, 595, 656
Bse118I	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
Bse1I	ACTGG	2 cut(s)	397, 1667
Bse8I	GATNNNNATC	1 cut(s)	457
BseAI	TCCGGA	2 cut(s)	104, 238
BseBI	CCWGG	2 cut(s)	50, 729
BseDI	CCNNGG	2 cut(s)	390, 1587
BseGI	GGATG	5 cut(s)	69, 264, 364, 979, 1360
BseJI	GATNNNNATC	1 cut(s)	457
BseLI	CCNNNNNNNGG	3 cut(s)	449, 595, 656
BseMII	CTCAG	2 cut(s)	621, 947
BseNI	ACTGG	2 cut(s)	397, 1667
BseRI	GAGGAG	6 cut(s)	115, 379, 395, 675, 678, 795
BseSI	GKGCMC	2 cut(s)	589, 1914
BseX3I	CGGCCG	1 cut(s)	222
BseXI	GCAGC	4 cut(s)	595, 607, 1324, 1570
BseYI	CCCAGC	1 cut(s)	1016
BsgI	GTGCAG	1 cut(s)	522
Bsh1236I	CGCG	6 cut(s)	8, 10, 15, 190, 212, 1459
Bsh1285I	CGRYCG	1 cut(s)	225
BshFI	GGCC	8 cut(s)	224, 332, 431, 565, 575, 1171, 1476, 1509
BshNI	GGYRCC	1 cut(s)	402
BshTI	ACCGGT	1 cut(s)	88
BsiEI	CGRYCG	1 cut(s)	225
BsiHKCI	CYCGRG	3 cut(s)	433, 947, 1424
BslFI	GGGAC	2 cut(s)	101, 376
BslI	CCNNNNNNNGG	3 cut(s)	449, 595, 656
BsmAI	GTCTC	3 cut(s)	1077, 1153, 1870
BsmBI	CGTCTC	1 cut(s)	1153
BsmFI	GGGAC	2 cut(s)	101, 376
BsmI	GAATGC	1 cut(s)	1169
BsnI	GGCC	8 cut(s)	224, 332, 431, 565, 575, 1171, 1476, 1509
BsoBI	CYCGRG	3 cut(s)	433, 947, 1424
Bsp1286I	GDGCHC	3 cut(s)	84, 589, 1914
Bsp13I	TCCGGA	2 cut(s)	104, 238
Bsp1407I	TGTACA	1 cut(s)	1517
Bsp143I	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
Bsp68I	TCGCGA	1 cut(s)	212
BspANI	GGCC	8 cut(s)	224, 332, 431, 565, 575, 1171, 1476, 1509
BspCNI	CTCAG	2 cut(s)	622, 946
BspEI	TCCGGA	2 cut(s)	104, 238
BspFNI	CGCG	6 cut(s)	8, 10, 15, 190, 212, 1459
BspHI	TCATGA	2 cut(s)	174, 1699
BspLI	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
BspMAI	CTGCAG	1 cut(s)	594
BspPI	GGATC	5 cut(s)	172, 208, 965, 1387, 1739
BspT107I	GGYRCC	1 cut(s)	402
BsrFI	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
BsrGI	TGTACA	1 cut(s)	1517
BsrI	ACTGG	2 cut(s)	397, 1667
BssAI	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
BssECI	CCNNGG	2 cut(s)	390, 1587
BssMI	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
BssSI	CACGAG	1 cut(s)	1566
Bst2BI	CACGAG	1 cut(s)	1566
Bst2UI	CCWGG	2 cut(s)	50, 729
Bst4CI	ACNGT	5 cut(s)	28, 208, 552, 1434, 1609
BstAPI	GCANNNNNTGC	1 cut(s)	1637
BstAUI	TGTACA	1 cut(s)	1517
BstBAI	YACGTR	1 cut(s)	812
BstC8I	GCNNGC	8 cut(s)	154, 272, 585, 858, 1169, 1335, 1854, 1910
BstDEI	CTNAG	4 cut(s)	570, 630, 933, 1672
BstENI	CCTNNNNNAGG	1 cut(s)	593
BstF5I	GGATG	5 cut(s)	69, 264, 364, 979, 1360
BstFNI	CGCG	6 cut(s)	8, 10, 15, 190, 212, 1459
BstHHI	GCGC	3 cut(s)	10, 17, 523
BstKTI	GATC	8 cut(s)	33, 180, 216, 775, 946, 973, 1382, 1747
BstMAI	GTCTC	3 cut(s)	1077, 1153, 1870
BstMBI	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
BstMCI	CGRYCG	1 cut(s)	225
BstNI	CCWGG	2 cut(s)	50, 729
BstNSI	RCATGY	2 cut(s)	1337, 1635
BstPAI	GACNNNNGTC	2 cut(s)	9, 1458
BstSCI	CCNGG	3 cut(s)	48, 442, 727
BstSFI	CTRYAG	1 cut(s)	590
BstSLI	GKGCMC	2 cut(s)	589, 1914
BstUI	CGCG	6 cut(s)	8, 10, 15, 190, 212, 1459
BstV1I	GCAGC	4 cut(s)	595, 607, 1324, 1570
BstV2I	GAAGAC	1 cut(s)	684
BstX2I	RGATCY	1 cut(s)	943
BstYI	RGATCY	1 cut(s)	943
BstZI	CGGCCG	1 cut(s)	222
BsuRI	GGCC	8 cut(s)	224, 332, 431, 565, 575, 1171, 1476, 1509
BtgZI	GCGATG	2 cut(s)	263, 1067
BtsCI	GGATG	5 cut(s)	69, 264, 364, 979, 1360
BtsI	GCAGTG	1 cut(s)	1626
BtsIMutI	CAGTG	4 cut(s)	404, 750, 1626, 1878
BtuMI	TCGCGA	1 cut(s)	212
Cac8I	GCNNGC	8 cut(s)	154, 272, 585, 858, 1169, 1335, 1854, 1910
CciI	TCATGA	2 cut(s)	174, 1699
CfoI	GCGC	3 cut(s)	10, 17, 523
Cfr10I	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
Cfr13I	GGNCC	6 cut(s)	43, 96, 107, 318, 394, 1507
CseI	GACGC	3 cut(s)	14, 179, 1448
Csp6I	GTAC	5 cut(s)	403, 1518, 1690, 1709, 1922
CspAI	ACCGGT	1 cut(s)	88
CspCI	CAANNNNNGTGG	2 cut(s)	748, 783
CviQI	GTAC	5 cut(s)	403, 1518, 1690, 1709, 1922
DdeI	CTNAG	4 cut(s)	570, 630, 933, 1672
DpnI	GATC	8 cut(s)	32, 179, 215, 774, 945, 972, 1381, 1746
DpnII	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
DrdI	GACNNNNNNGTC	1 cut(s)	41
DriI	GACNNNNNGTC	1 cut(s)	113
DseDI	GACNNNNNNGTC	1 cut(s)	41
EaeI	YGGCCR	1 cut(s)	222
EagI	CGGCCG	1 cut(s)	222
Eam1105I	GACNNNNNGTC	1 cut(s)	113
EciI	GGCGGA	4 cut(s)	35, 271, 451, 462
EclXI	CGGCCG	1 cut(s)	222
Eco24I	GRGCYC	1 cut(s)	84
Eco47I	GGWCC	5 cut(s)	43, 96, 107, 318, 394
Eco52I	CGGCCG	1 cut(s)	222
Eco57I	CTGAAG	3 cut(s)	726, 1025, 1272
Eco88I	CYCGRG	3 cut(s)	433, 947, 1424
EcoNI	CCTNNNNNAGG	1 cut(s)	593
EcoO109I	RGGNCCY	2 cut(s)	318, 1507
EcoRII	CCWGG	2 cut(s)	48, 727
EcoT22I	ATGCAT	3 cut(s)	981, 1557, 1657
EcoT38I	GRGCYC	1 cut(s)	84
Esp3I	CGTCTC	1 cut(s)	1153
FalI	AAGNNNNNCTT	2 cut(s)	1470, 1502
FaqI	GGGAC	2 cut(s)	101, 376
FauI	CCCGC	2 cut(s)	82, 118
FauNDI	CATATG	1 cut(s)	1375
FblI	GTMKAC	1 cut(s)	1452
Fnu4HI	GCNGC	9 cut(s)	225, 254, 415, 465, 609, 618, 621, 1338, 1584
FokI	GGATG	5 cut(s)	56, 271, 371, 966, 1367
FriOI	GRGCYC	1 cut(s)	84
Fsp4HI	GCNGC	9 cut(s)	225, 254, 415, 465, 609, 618, 621, 1338, 1584
FspBI	CTAG	2 cut(s)	561, 1739
GlaI	GCGC	3 cut(s)	9, 16, 522
GluI	GCNGC	9 cut(s)	225, 254, 415, 465, 609, 618, 621, 1338, 1584
GsaI	CCCAGC	1 cut(s)	1020
GsuI	CTGGAG	2 cut(s)	132, 678
HaeIII	GGCC	8 cut(s)	224, 332, 431, 565, 575, 1171, 1476, 1509
HgaI	GACGC	3 cut(s)	14, 179, 1448
HhaI	GCGC	3 cut(s)	10, 17, 523
Hin6I	GCGC	3 cut(s)	8, 15, 521
HinP1I	GCGC	3 cut(s)	8, 15, 521
HindIII	AAGCTT	1 cut(s)	1466
HphI	GGTGA	5 cut(s)	185, 782, 1333, 1370, 1754
Hpy166II	GTNNAC	2 cut(s)	677, 1453
Hpy8I	GTNNAC	2 cut(s)	677, 1453
Hpy99I	CGWCG	5 cut(s)	15, 212, 304, 340, 346
HpyAV	CCTTC	3 cut(s)	34, 757, 1466
HpyCH4III	ACNGT	5 cut(s)	28, 208, 552, 1434, 1609
HpyCH4IV	ACGT	3 cut(s)	604, 811, 1146
HpyF3I	CTNAG	4 cut(s)	570, 630, 933, 1672
HpySE526I	ACGT	3 cut(s)	604, 811, 1146
HspAI	GCGC	3 cut(s)	8, 15, 521
Kpn2I	TCCGGA	2 cut(s)	104, 238
KpnI	GGTACC	1 cut(s)	406
KroI	GCCGGC	1 cut(s)	152
KroNI	GCCGGC	1 cut(s)	154
Kzo9I	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
LmnI	GCTCC	3 cut(s)	422, 665, 1580
Lsp1109I	GCAGC	4 cut(s)	595, 607, 1324, 1570
LweI	GCATC	7 cut(s)	240, 699, 746, 988, 1044, 1741, 1834
MaeI	CTAG	2 cut(s)	561, 1739
MaeII	ACGT	3 cut(s)	604, 811, 1146
MaeIII	GTNAC	5 cut(s)	191, 290, 1142, 1561, 1876
MalI	GATC	8 cut(s)	32, 179, 215, 774, 945, 972, 1381, 1746
MboI	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
MboII	GAAGA	5 cut(s)	52, 648, 684, 732, 1785
MflI	RGATCY	1 cut(s)	943
MhlI	GDGCHC	3 cut(s)	84, 589, 1914
MluCI	AATT	6 cut(s)	896, 1226, 1278, 1305, 1798, 1831
MlyI	GAGTC	5 cut(s)	314, 358, 959, 1222, 1448
MmeI	TCCRAC	2 cut(s)	282, 979
Mph1103I	ATGCAT	3 cut(s)	981, 1557, 1657
MroI	TCCGGA	2 cut(s)	104, 238
MroNI	GCCGGC	1 cut(s)	152
MseI	TTAA	3 cut(s)	1059, 1124, 1835
MslI	CAYNNNNRTG	3 cut(s)	1416, 1533, 1907
MspA1I	CMGCKG	2 cut(s)	620, 1856
MspR9I	CCNGG	3 cut(s)	50, 444, 729
Mva1269I	GAATGC	1 cut(s)	1169
MvaI	CCWGG	2 cut(s)	50, 729
MvnI	CGCG	6 cut(s)	8, 10, 15, 190, 212, 1459
NaeI	GCCGGC	1 cut(s)	154
NciI	CCSGG	1 cut(s)	444
NdeI	CATATG	1 cut(s)	1375
NdeII	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
NgoMIV	GCCGGC	1 cut(s)	152
NlaIV	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
NmeAIII	GCCGAG	2 cut(s)	103, 860
NmuCI	GTSAC	2 cut(s)	191, 1876
NruI	TCGCGA	1 cut(s)	212
NsiI	ATGCAT	3 cut(s)	981, 1557, 1657
NspI	RCATGY	2 cut(s)	1337, 1635
OliI	CACNNNNGTG	1 cut(s)	1907
PaeI	GCATGC	1 cut(s)	1337
PaeR7I	CTCGAG	2 cut(s)	433, 947
PagI	TCATGA	2 cut(s)	174, 1699
PcsI	WCGNNNNNNNCGW	2 cut(s)	19, 341
PctI	GAATGC	1 cut(s)	1169
PdiI	GCCGGC	1 cut(s)	154
PfeI	GAWTC	7 cut(s)	143, 242, 263, 458, 1247, 1718, 1894
PflFI	GACNNNGTC	1 cut(s)	206
PinAI	ACCGGT	1 cut(s)	88
PkrI	GCNGC	9 cut(s)	226, 255, 416, 466, 610, 619, 622, 1339, 1585
PleI	GAGTC	5 cut(s)	313, 358, 958, 1221, 1448
PpsI	GAGTC	5 cut(s)	313, 358, 958, 1221, 1448
Ppu21I	YACGTR	1 cut(s)	812
PpuMI	RGGWCCY	1 cut(s)	318
PshAI	GACNNNNGTC	2 cut(s)	9, 1458
PsiI	TTATAA	3 cut(s)	993, 1208, 1292
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	2 cut(s)	48, 727
PspFI	CCCAGC	1 cut(s)	1016
PspGI	CCWGG	2 cut(s)	48, 727
PspN4I	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
PspPI	GGNCC	6 cut(s)	43, 96, 107, 318, 394, 1507
PspPPI	RGGWCCY	1 cut(s)	318
PspXI	VCTCGAGB	1 cut(s)	433
PstI	CTGCAG	1 cut(s)	594
PsuI	RGATCY	1 cut(s)	943
PsyI	GACNNNGTC	1 cut(s)	206
RruI	TCGCGA	1 cut(s)	212
RsaI	GTAC	5 cut(s)	404, 1519, 1691, 1710, 1923
RsaNI	GTAC	5 cut(s)	403, 1518, 1690, 1709, 1922
RseI	CAYNNNNRTG	3 cut(s)	1416, 1533, 1907
SaqAI	TTAA	3 cut(s)	1059, 1124, 1835
SatI	GCNGC	9 cut(s)	225, 254, 415, 465, 609, 618, 621, 1338, 1584
Sau3AI	GATC	8 cut(s)	30, 177, 213, 772, 943, 970, 1379, 1744
Sau96I	GGNCC	6 cut(s)	43, 96, 107, 318, 394, 1507
SbfI	CCTGCAGG	1 cut(s)	594
SchI	GAGTC	5 cut(s)	314, 358, 959, 1222, 1448
ScrFI	CCNGG	3 cut(s)	50, 444, 729
SdaI	CCTGCAGG	1 cut(s)	594
SduI	GDGCHC	3 cut(s)	84, 589, 1914
SfaNI	GCATC	7 cut(s)	240, 699, 746, 988, 1044, 1741, 1834
SfcI	CTRYAG	1 cut(s)	590
Sfr274I	CTCGAG	2 cut(s)	433, 947
SinI	GGWCC	5 cut(s)	43, 96, 107, 318, 394
SlaI	CTCGAG	2 cut(s)	433, 947
SmiMI	CAYNNNNRTG	3 cut(s)	1416, 1533, 1907
SmlI	CTYRAG	2 cut(s)	433, 947
SmoI	CTYRAG	2 cut(s)	433, 947
SphI	GCATGC	1 cut(s)	1337
Sse8387I	CCTGCAGG	1 cut(s)	594
Sse9I	AATT	6 cut(s)	896, 1226, 1278, 1305, 1798, 1831
SspMI	CTAG	2 cut(s)	561, 1739
StyD4I	CCNGG	3 cut(s)	48, 442, 727
TaaI	ACNGT	5 cut(s)	28, 208, 552, 1434, 1609
TaiI	ACGT	3 cut(s)	607, 814, 1149
TaqI	TCGA	9 cut(s)	33, 344, 354, 434, 554, 775, 948, 1117, 1616
TaqII	GACCGA	2 cut(s)	382, 1299
TasI	AATT	6 cut(s)	896, 1226, 1278, 1305, 1798, 1831
TatI	WGTACW	2 cut(s)	1517, 1708
TauI	GCSGC	5 cut(s)	227, 256, 417, 467, 620
TfiI	GAWTC	7 cut(s)	143, 242, 263, 458, 1247, 1718, 1894
Tru1I	TTAA	3 cut(s)	1059, 1124, 1835
Tru9I	TTAA	3 cut(s)	1059, 1124, 1835
TscAI	CASTG	4 cut(s)	404, 750, 1633, 1885
TseFI	GTSAC	2 cut(s)	191, 1876
TseI	GCWGC	4 cut(s)	608, 620, 1337, 1583
Tsp45I	GTSAC	2 cut(s)	191, 1876
TspDTI	ATGAA	7 cut(s)	543, 936, 1434, 1478, 1572, 1688, 1716
TspRI	CASTG	4 cut(s)	404, 750, 1633, 1885
Tth111I	GACNNNGTC	1 cut(s)	206
VpaK11BI	GGWCC	5 cut(s)	43, 96, 107, 318, 394
XagI	CCTNNNNNAGG	1 cut(s)	593
XapI	RAATTY	1 cut(s)	1831
XceI	RCATGY	2 cut(s)	1337, 1635
XhoI	CTCGAG	2 cut(s)	433, 947
XmiI	GTMKAC	1 cut(s)	1452
XspI	CTAG	2 cut(s)	561, 1739
Zsp2I	ATGCAT	3 cut(s)	981, 1557, 1657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.