Rmu_sc0006158.1_g000003

Belongs to the eIF-2B alpha beta delta subunits family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006158.1
Physical Location & Seq
Reverse (-)
14305 .. 14643
339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006158.1_g000003.1.cds

Sequence Viewer

Length: 339 bp
atggttgcaaatgcattctgcgttccggtctttatctgctgtgaatcttataagtttcatgaaagggcacagctcaattcaatttgctctaacaaactagatgatccagatgatattgcaaaggtttctagaagtgatctgaacttaaagtatgatgctactctatcagattacatatctatgattataacagattatggcatggttctaccaagtaccaacaagcatgcctgcgattatagggatatcgcagagagcacttgtagaacgacaaatatgcctcatggatatataccaagatcaatggcggaaccaggatccaaaacctatctaggctaa

Protein Analysis

112

Amino Acids

12.56

Weight (kDa)

5.47

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 51, 188
AciI CCGC 1 cut(s) 308
AclWI GGATC 3 cut(s) 98, 312, 325
AfaI GTAC 1 cut(s) 217
AgsI TTSAA 1 cut(s) 81
AjnI CCWGG 1 cut(s) 313
AluBI AGCT 1 cut(s) 73
AluI AGCT 1 cut(s) 73
Alw21I GWGCWC 1 cut(s) 260
AlwI GGATC 3 cut(s) 98, 312, 325
BaeGI GKGCMC 1 cut(s) 70
BamHI GGATCC 1 cut(s) 317
Bbv12I GWGCWC 1 cut(s) 260
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 1 cut(s) 315
BfaI CTAG 3 cut(s) 98, 129, 332
Bme1390I CCNGG 1 cut(s) 315
BmiI GGNNCC 2 cut(s) 312, 319
BmrFI CCNGG 1 cut(s) 315
BmsI GCATC 1 cut(s) 145
BsaWI WCCGGW 1 cut(s) 25
BseBI CCWGG 1 cut(s) 315
BseSI GKGCMC 1 cut(s) 70
BsiHKAI GWGCWC 1 cut(s) 260
BsiSI CCGG 1 cut(s) 26
BsmI GAATGC 1 cut(s) 14
Bsp1286I GDGCHC 2 cut(s) 70, 260
Bsp143I GATC 4 cut(s) 103, 136, 299, 317
BspACI CCGC 1 cut(s) 308
BspHI TCATGA 1 cut(s) 58
BspLI GGNNCC 2 cut(s) 312, 319
BspPI GGATC 3 cut(s) 98, 312, 325
BssMI GATC 4 cut(s) 103, 136, 299, 317
Bst2UI CCWGG 1 cut(s) 315
BstC8I GCNNGC 2 cut(s) 228, 232
BstKTI GATC 4 cut(s) 106, 139, 302, 320
BstMBI GATC 4 cut(s) 103, 136, 299, 317
BstNI CCWGG 1 cut(s) 315
BstNSI RCATGY 1 cut(s) 230
BstSCI CCNGG 1 cut(s) 313
BstSLI GKGCMC 1 cut(s) 70
BstX2I RGATCY 1 cut(s) 317
BstYI RGATCY 1 cut(s) 317
Cac8I GCNNGC 2 cut(s) 228, 232
CciI TCATGA 1 cut(s) 58
Csp6I GTAC 1 cut(s) 216
CviAII CATG 4 cut(s) 59, 202, 227, 284
CviJI RGCY 2 cut(s) 73, 336
CviKI_1 RGCY 2 cut(s) 73, 336
CviQI GTAC 1 cut(s) 216
DpnI GATC 4 cut(s) 105, 138, 301, 319
DpnII GATC 4 cut(s) 103, 136, 299, 317
EciI GGCGGA 1 cut(s) 323
Eco32I GATATC 1 cut(s) 247
EcoRII CCWGG 1 cut(s) 313
EcoRV GATATC 1 cut(s) 247
EcoT22I ATGCAT 1 cut(s) 16
FaeI CATG 4 cut(s) 62, 205, 230, 287
FatI CATG 4 cut(s) 58, 201, 226, 283
FspBI CTAG 3 cut(s) 98, 129, 332
HapII CCGG 1 cut(s) 26
Hin1II CATG 4 cut(s) 62, 205, 230, 287
HinfI GANTC 1 cut(s) 44
HpaII CCGG 1 cut(s) 26
Hpy188I TCNGA 2 cut(s) 141, 169
Hpy188III TCNNGA 3 cut(s) 59, 107, 129
HpyCH4V TGCA 3 cut(s) 8, 14, 119
Hsp92II CATG 4 cut(s) 62, 205, 230, 287
Kzo9I GATC 4 cut(s) 103, 136, 299, 317
LpnPI CCDG 5 cut(s) 39, 120, 244, 300, 327
LweI GCATC 1 cut(s) 145
MaeI CTAG 3 cut(s) 98, 129, 332
MalI GATC 4 cut(s) 105, 138, 301, 319
MboI GATC 4 cut(s) 103, 136, 299, 317
MflI RGATCY 1 cut(s) 317
MhlI GDGCHC 2 cut(s) 70, 260
MluCI AATT 2 cut(s) 76, 81
MnlI CCTC 1 cut(s) 291
Mph1103I ATGCAT 1 cut(s) 16
MseI TTAA 1 cut(s) 146
MslI CAYNNNNRTG 1 cut(s) 179
MspI CCGG 1 cut(s) 26
MspR9I CCNGG 1 cut(s) 315
Mva1269I GAATGC 1 cut(s) 14
MvaI CCWGG 1 cut(s) 315
NdeII GATC 4 cut(s) 103, 136, 299, 317
NlaIII CATG 4 cut(s) 62, 205, 230, 287
NlaIV GGNNCC 2 cut(s) 312, 319
NsiI ATGCAT 1 cut(s) 16
NspI RCATGY 1 cut(s) 230
PaeI GCATGC 1 cut(s) 230
PagI TCATGA 1 cut(s) 58
PctI GAATGC 1 cut(s) 14
PfeI GAWTC 1 cut(s) 44
PsiI TTATAA 2 cut(s) 51, 188
Psp6I CCWGG 1 cut(s) 313
PspGI CCWGG 1 cut(s) 313
PspN4I GGNNCC 2 cut(s) 312, 319
PsuI RGATCY 1 cut(s) 317
RsaI GTAC 1 cut(s) 217
RsaNI GTAC 1 cut(s) 216
RseI CAYNNNNRTG 1 cut(s) 179
SaqAI TTAA 1 cut(s) 146
Sau3AI GATC 4 cut(s) 103, 136, 299, 317
ScrFI CCNGG 1 cut(s) 315
SduI GDGCHC 2 cut(s) 70, 260
SetI ASST 3 cut(s) 75, 126, 329
SfaNI GCATC 1 cut(s) 145
SmiMI CAYNNNNRTG 1 cut(s) 179
SphI GCATGC 1 cut(s) 230
Sse9I AATT 2 cut(s) 76, 81
SsiI CCGC 1 cut(s) 308
SspMI CTAG 3 cut(s) 98, 129, 332
StyD4I CCNGG 1 cut(s) 313
TasI AATT 2 cut(s) 76, 81
TfiI GAWTC 1 cut(s) 44
Tru1I TTAA 1 cut(s) 146
Tru9I TTAA 1 cut(s) 146
TspDTI ATGAA 2 cut(s) 47, 75
XbaI TCTAGA 1 cut(s) 128
XceI RCATGY 1 cut(s) 230
XspI CTAG 3 cut(s) 98, 129, 332
Zsp2I ATGCAT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.