Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001557.1

Orthogroup ID

OG0004613

Physical Location & Seq

Genomic Coordinates Forward (+)

56831 .. 61330

Gene Structure 4500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001557.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

atggacgcgcgtcgcgcttcccgaaccgtgatcgacccgaaggtccgccaggtcggcttcttcactcccatccccgccgagcccttaccggttcggacccaatccggacccgcagtcccaacctcctctgttcctctctccgaatctccggccggcaactcactctctcccgtcatgatccccccctcgcgtcacctttcagacaccgtcgcgatccgcacggccgccgtgccggttccggaatcggcgatgcggcggatggattccggcgagcaagtgccggtggggagttacaacccgtcggagtcgttgttagggtcctctccggtggcctcgtcgccgtcgagtagggtcgaggatgggactctggggttctcggaggagaactcctcggtccagtggtaccggcgaagcggctccggcaagatggcctcgagtttgcccggcggaggatttgaatccgccgctttgagaacgcctcttgaagttccagaaaaaagtgcagaggtggttccgaaagtgcagaatgaagttcctacaagttcagaacagtcgaaagctaagccgactaaggccgaaaggcgtgccctgcaggaggctcaacgtgctgcaaaagccgctgccaaagctgagggaagaaaacctacccctgtatctggaggaggagctacgagtaaacctgtaaagcagtcttcccaaaagaaagagatgcaaaagaaagatactcctggcgttgcatcttcagtggttgcttctgacaagaagggtggtgatcgaccaacagataggaggaaagatgttcctcctccacgtatgcagtttgatgataagagccgagtggaaaaggcaaaaaggcgtgctgtggtcaatcaaacagaagctaaaaacagagttgaattgttccggcatttgcctcaatatgaacggggaactcagcttccagatctcgagtcaaagttttttcaacttgatcccatgcatcctgccatttataaggttggactgaagtatttggctggggatatatcggggggtaatgctcgttgtattgcaatgcttaaagcatttcaggaagccattagagactactctacgccaccagagaaaactcttgttcgagatttaacagcaaaaatcagtagttacgtctcattttttatagaatgcaggccactttctattagcatgggaaatgcagttaggtttataaagagtcgtgttgcgaaattgccattgagcctttccgagtctgaagctaaatccacgctttgttcagaaattgaccgatttataaatgacaagataattattgctgataaggtgatagttaggcatgctgctacaaagattagggatggtgatgttctactcacatatggatcatcatgtgttgttgagatgatttttctacacgcccatgaactcgggaaacagtttcgtgttgtgattgtagactcgcgtccaaagcttgaaggccaagcattacttcataggcttgtagcaaagggcctgacttgtacatatactcatataaatgccgtgtcttatatcatgcatgaagttggactgaagtatttggctggggatatatcggggggtaatgctcgttgtattgcaatgcttaaagcatttcaggaagccattagagactactctacgccaccagagaaaactcttgttcgagatttaacagcaaaaatcagtagttacgtctcattttttatagaatgcaggccactttctattagcatgggaaatgcagttaggtttataaagagtcgtgttgcgaaattgccattgagcctttccgagtatgtccaaagtaatgttggactgaagtatttggctggggatatatcggggggtaatgctcgttgtattgcaatgcttaaagcatttcaggaagccattagagactactctacgccaccagagaaaactcttgttcgagatttaacagcaaaaatcagtagttacgtctcattttttatagaatgcaggccactttctattagcatgggaaatgcagttaggtttataaagagtcgtgttgcgaaattgccattgagcctttccgagtctgaagctaaatccacgctttgttcagaaattgaccgatttataaatgacaagataattattgctgataaggtgatagttaggcatgctgctacaaagattagggatggtgatgttctactcacatatggatcatcatgtgttgttgagatgatttttctacacgcccatgaactcgggaaacagtttcgtgttgtgattgtagactcgcgtccaaagcttgaaggccaagcattacttcataggcttgtagcaaagggcctgacttgtacatatactcatataaatgccgtgtcttatatcatgcatgaagtaacacgagtgtttttgggagctgcctcggttttatctaatggaactgtatattcgagagttggcactgcatgtgttgctatggttgctcatgcattttgcgttccagtcttagtgtgctgtgaagcttacaagtttcatgaaagagtacagcttgattccatttgctctaacgaactaggtgatccagatgctattgcaaaagtttctggaagaactgatataaactatctggaaaattgggcgaataaggaaaatctgcaacttctgaatttaatgtatgatgctacgccagcggattatgtctccatgattgtcactgattatggcatgattccacccaccagcgtgcccgtcattgtacgggaatatggcagagaacacctgtattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001541 GO:0002253 GO:0002376 GO:0002429 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007272 GO:0007275 GO:0007399 GO:0007417 GO:0007548 GO:0008150 GO:0008152 GO:0008366 GO:0008406 GO:0008585 GO:0009058 GO:0009059 GO:0009987 GO:0010001 GO:0010467 GO:0014003 GO:0019538 GO:0021782 GO:0022008 GO:0022414 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034645 GO:0042063 GO:0042552 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045137 GO:0046545 GO:0046660 GO:0048468 GO:0048513 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048709 GO:0048731 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050851 GO:0050852 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

IF-2B

Protein Analysis

927

Amino Acids

101.54

Weight (kDa)

9.3

Isoelectric Point (pI)

43.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48970 AT1G48970
fragaria_vesca	FvH4_3g05690 FvH4_5g12800 FvH4_5g12800
malus_domestica	MD06G1210100.v1.1 MD14G1221000.v1.1
prunus_persica	Prupe.5G216300_v2.0.a1
pyrus_communis	pycom06g18780 pycom14g18290
rosa_chinensis	RchiOBHm_Chr4g0426391 RchiOBHm_Chr7g0184441
rosa_laevigata	RLG00000004975 RLG00000007298
rosa_multiflora	Rmu_sc0001557.1_g000016 Rmu_sc0006158.1_g000003 Rmu_sc0006158.1_g000004 Rmu_sc0007942.1_g000006
rosa_roxburghii	Rroxscaffold_3G00269610 Rroxscaffold_5G00368400
rosa_rugosa	Rorug04G0210500
rosa_samantha	Rh3DG253600 Rh4BG273600 Rh4CG287800 Rh4CG287900 Rh4DG270400 Rh7AG079900 Rh7BG067300 Rh7CG067600 Rh7DG067300
rosa_wichuraiana	Rw7G005540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	6 cut(s)	993, 1208, 1292, 1772, 2039, 2123
AasI	GACNNNNNNGTC	1 cut(s)	41
Acc65I	GGTACC	1 cut(s)	402
AccB1I	GGYRCC	1 cut(s)	402
AccI	GTMKAC	2 cut(s)	1452, 2283
AccII	CGCG	7 cut(s)	8, 10, 15, 190, 212, 1459, 2290
AccIII	TCCGGA	2 cut(s)	104, 238
AclWI	GGATC	6 cut(s)	172, 208, 965, 1387, 2218, 2570
AcoI	YGGCCR	2 cut(s)	150, 222
AcsI	RAATTY	1 cut(s)	2662
AcuI	CTGAAG	6 cut(s)	726, 1025, 1272, 1589, 1856, 2103
AfaI	GTAC	5 cut(s)	404, 1519, 2350, 2541, 2754
AfiI	CCNNNNNNNGG	3 cut(s)	449, 595, 656
AgeI	ACCGGT	1 cut(s)	88
AgsI	TTSAA	6 cut(s)	458, 485, 896, 965, 1472, 2303
AhdI	GACNNNNNGTC	1 cut(s)	113
AjnI	CCWGG	2 cut(s)	48, 727
AjuI	GAANNNNNNNTTGG	4 cut(s)	1470, 1502, 2301, 2333
AleI	CACNNNNGTG	1 cut(s)	2738
AloI	GAACNNNNNNTCC	2 cut(s)	922, 954
Alw26I	GTCTC	7 cut(s)	1077, 1153, 1641, 1717, 1908, 1984, 2701
AlwI	GGATC	6 cut(s)	172, 208, 965, 1387, 2218, 2570
Ama87I	CYCGRG	4 cut(s)	433, 947, 1424, 2255
Aor13HI	TCCGGA	2 cut(s)	104, 238
ApeKI	GCWGC	5 cut(s)	608, 620, 1337, 2168, 2414
ApoI	RAATTY	1 cut(s)	2662
AsiGI	ACCGGT	1 cut(s)	88
Asp718I	GGTACC	1 cut(s)	402
AspLEI	GCGC	2 cut(s)	10, 17
AspS9I	GGNCC	7 cut(s)	43, 96, 107, 318, 394, 1507, 2338
AsuC2I	CCSGG	1 cut(s)	444
AsuHPI	GGTGA	7 cut(s)	185, 782, 1333, 1370, 2164, 2201, 2585
AvaI	CYCGRG	4 cut(s)	433, 947, 1424, 2255
AvaII	GGWCC	5 cut(s)	43, 96, 107, 318, 394
BaeGI	GKGCMC	2 cut(s)	589, 2745
BaeI	ACNNNNGTAYC	2 cut(s)	636, 669
BanI	GGYRCC	1 cut(s)	402
BanII	GRGCYC	1 cut(s)	84
BarI	GAAGNNNNNNTAC	2 cut(s)	628, 660
BauI	CACGAG	1 cut(s)	2397
BbsI	GAAGAC	1 cut(s)	684
BbvCI	CCTCAGC	1 cut(s)	630
BbvI	GCAGC	5 cut(s)	595, 607, 1324, 2155, 2401
BccI	CCATC	6 cut(s)	77, 253, 353, 421, 1349, 2180
BceAI	ACGGC	5 cut(s)	212, 237, 325, 1523, 2354
BcgI	CGANNNNNNTGC	2 cut(s)	566, 600
BciT130I	CCWGG	2 cut(s)	50, 729
BcnI	CCSGG	1 cut(s)	444
BcoDI	GTCTC	7 cut(s)	1077, 1153, 1641, 1717, 1908, 1984, 2701
BfaI	CTAG	1 cut(s)	2570
BfmI	CTRYAG	1 cut(s)	590
BglI	GCCNNNNNGGC	1 cut(s)	54
BglII	AGATCT	1 cut(s)	943
BlpI	GCTNAGC	1 cut(s)	561
Bme1390I	CCNGG	3 cut(s)	50, 444, 729
Bme18I	GGWCC	5 cut(s)	43, 96, 107, 318, 394
BmeRI	GACNNNNNGTC	1 cut(s)	113
BmeT110I	CYCGRG	4 cut(s)	433, 947, 1424, 2255
BmgT120I	GGNCC	7 cut(s)	43, 96, 107, 318, 394, 1507, 2338
BmiI	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
BmrFI	CCNGG	3 cut(s)	50, 444, 729
BmsI	GCATC	6 cut(s)	240, 699, 746, 988, 2572, 2665
BoxI	GACNNNNGTC	3 cut(s)	9, 1458, 2289
BpiI	GAAGAC	1 cut(s)	684
BplI	GAGNNNNNCTC	6 cut(s)	371, 403, 374, 406, 463, 495
BpmI	CTGGAG	1 cut(s)	678
Bpu10I	CCTNAGC	1 cut(s)	630
Bpu1102I	GCTNAGC	1 cut(s)	561
BpuMI	CCSGG	1 cut(s)	444
BsaAI	YACGTR	1 cut(s)	812
BsaBI	GATNNNNATC	1 cut(s)	457
BsaJI	CCNNGG	2 cut(s)	390, 2418
BsaWI	WCCGGW	4 cut(s)	88, 104, 238, 325
BsaXI	ACNNNNNCTCC	2 cut(s)	296, 326
Bsc4I	CCNNNNNNNGG	3 cut(s)	449, 595, 656
Bse118I	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
Bse1I	ACTGG	2 cut(s)	397, 2498
Bse3DI	GCAATG	3 cut(s)	1059, 1623, 1890
Bse8I	GATNNNNATC	1 cut(s)	457
BseAI	TCCGGA	2 cut(s)	104, 238
BseBI	CCWGG	2 cut(s)	50, 729
BseDI	CCNNGG	2 cut(s)	390, 2418
BseGI	GGATG	6 cut(s)	69, 264, 364, 979, 1360, 2191
BseJI	GATNNNNATC	1 cut(s)	457
BseLI	CCNNNNNNNGG	3 cut(s)	449, 595, 656
BseMI	GCAATG	3 cut(s)	1059, 1623, 1890
BseMII	CTCAG	2 cut(s)	621, 947
BseNI	ACTGG	2 cut(s)	397, 2498
BseRI	GAGGAG	6 cut(s)	115, 379, 395, 675, 678, 795
BseSI	GKGCMC	2 cut(s)	589, 2745
BseX3I	CGGCCG	2 cut(s)	150, 222
BseXI	GCAGC	5 cut(s)	595, 607, 1324, 2155, 2401
BseYI	CCCAGC	3 cut(s)	1016, 1580, 1847
BsgI	GTGCAG	2 cut(s)	522, 542
Bsh1236I	CGCG	7 cut(s)	8, 10, 15, 190, 212, 1459, 2290
Bsh1285I	CGRYCG	2 cut(s)	153, 225
BshNI	GGYRCC	1 cut(s)	402
BshTI	ACCGGT	1 cut(s)	88
BsiEI	CGRYCG	2 cut(s)	153, 225
BsiHKCI	CYCGRG	4 cut(s)	433, 947, 1424, 2255
BslFI	GGGAC	2 cut(s)	101, 376
BslI	CCNNNNNNNGG	3 cut(s)	449, 595, 656
BsmAI	GTCTC	7 cut(s)	1077, 1153, 1641, 1717, 1908, 1984, 2701
BsmBI	CGTCTC	3 cut(s)	1153, 1717, 1984
BsmFI	GGGAC	2 cut(s)	101, 376
BsmI	GAATGC	3 cut(s)	1169, 1733, 2000
BsoBI	CYCGRG	4 cut(s)	433, 947, 1424, 2255
Bsp1286I	GDGCHC	3 cut(s)	84, 589, 2745
Bsp13I	TCCGGA	2 cut(s)	104, 238
Bsp1407I	TGTACA	2 cut(s)	1517, 2348
Bsp143I	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
Bsp1720I	GCTNAGC	1 cut(s)	561
Bsp68I	TCGCGA	1 cut(s)	212
BspCNI	CTCAG	2 cut(s)	622, 946
BspEI	TCCGGA	2 cut(s)	104, 238
BspFNI	CGCG	7 cut(s)	8, 10, 15, 190, 212, 1459, 2290
BspHI	TCATGA	2 cut(s)	174, 2530
BspLI	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
BspMAI	CTGCAG	1 cut(s)	594
BspPI	GGATC	6 cut(s)	172, 208, 965, 1387, 2218, 2570
BspT107I	GGYRCC	1 cut(s)	402
BsrDI	GCAATG	3 cut(s)	1059, 1623, 1890
BsrFI	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
BsrGI	TGTACA	2 cut(s)	1517, 2348
BsrI	ACTGG	2 cut(s)	397, 2498
BssAI	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
BssECI	CCNNGG	2 cut(s)	390, 2418
BssMI	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
BssSI	CACGAG	1 cut(s)	2397
Bst2BI	CACGAG	1 cut(s)	2397
Bst2UI	CCWGG	2 cut(s)	50, 729
Bst4CI	ACNGT	6 cut(s)	28, 208, 552, 1434, 2265, 2440
BstAPI	GCANNNNNTGC	1 cut(s)	2468
BstAUI	TGTACA	2 cut(s)	1517, 2348
BstBAI	YACGTR	1 cut(s)	812
BstDEI	CTNAG	5 cut(s)	561, 570, 630, 933, 2503
BstENI	CCTNNNNNAGG	1 cut(s)	593
BstF5I	GGATG	6 cut(s)	69, 264, 364, 979, 1360, 2191
BstFNI	CGCG	7 cut(s)	8, 10, 15, 190, 212, 1459, 2290
BstHHI	GCGC	2 cut(s)	10, 17
BstKTI	GATC	9 cut(s)	33, 180, 216, 775, 946, 973, 1382, 2213, 2578
BstMAI	GTCTC	7 cut(s)	1077, 1153, 1641, 1717, 1908, 1984, 2701
BstMBI	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
BstMCI	CGRYCG	2 cut(s)	153, 225
BstNI	CCWGG	2 cut(s)	50, 729
BstNSI	RCATGY	3 cut(s)	1337, 2168, 2466
BstPAI	GACNNNNGTC	3 cut(s)	9, 1458, 2289
BstSCI	CCNGG	3 cut(s)	48, 442, 727
BstSFI	CTRYAG	1 cut(s)	590
BstSLI	GKGCMC	2 cut(s)	589, 2745
BstUI	CGCG	7 cut(s)	8, 10, 15, 190, 212, 1459, 2290
BstV1I	GCAGC	5 cut(s)	595, 607, 1324, 2155, 2401
BstV2I	GAAGAC	1 cut(s)	684
BstX2I	RGATCY	1 cut(s)	943
BstYI	RGATCY	1 cut(s)	943
BstZI	CGGCCG	2 cut(s)	150, 222
BtgZI	GCGATG	1 cut(s)	263
BtsCI	GGATG	6 cut(s)	69, 264, 364, 979, 1360, 2191
BtsI	GCAGTG	1 cut(s)	2457
BtsIMutI	CAGTG	4 cut(s)	404, 750, 2457, 2709
BtuMI	TCGCGA	1 cut(s)	212
CciI	TCATGA	2 cut(s)	174, 2530
CfoI	GCGC	2 cut(s)	10, 17
Cfr10I	RCCGGY	5 cut(s)	88, 152, 232, 280, 405
Cfr13I	GGNCC	7 cut(s)	43, 96, 107, 318, 394, 1507, 2338
CseI	GACGC	4 cut(s)	14, 179, 1448, 2279
Csp6I	GTAC	5 cut(s)	403, 1518, 2349, 2540, 2753
CspAI	ACCGGT	1 cut(s)	88
CspCI	CAANNNNNGTGG	2 cut(s)	748, 783
CviQI	GTAC	5 cut(s)	403, 1518, 2349, 2540, 2753
DdeI	CTNAG	5 cut(s)	561, 570, 630, 933, 2503
DpnI	GATC	9 cut(s)	32, 179, 215, 774, 945, 972, 1381, 2212, 2577
DpnII	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
DrdI	GACNNNNNNGTC	1 cut(s)	41
DriI	GACNNNNNGTC	1 cut(s)	113
DseDI	GACNNNNNNGTC	1 cut(s)	41
EaeI	YGGCCR	2 cut(s)	150, 222
EagI	CGGCCG	2 cut(s)	150, 222
Eam1105I	GACNNNNNGTC	1 cut(s)	113
EciI	GGCGGA	4 cut(s)	35, 271, 451, 462
EclXI	CGGCCG	2 cut(s)	150, 222
Eco24I	GRGCYC	1 cut(s)	84
Eco47I	GGWCC	5 cut(s)	43, 96, 107, 318, 394
Eco52I	CGGCCG	2 cut(s)	150, 222
Eco57I	CTGAAG	6 cut(s)	726, 1025, 1272, 1589, 1856, 2103
Eco88I	CYCGRG	4 cut(s)	433, 947, 1424, 2255
EcoNI	CCTNNNNNAGG	1 cut(s)	593
EcoO109I	RGGNCCY	3 cut(s)	318, 1507, 2338
EcoRII	CCWGG	2 cut(s)	48, 727
EcoT22I	ATGCAT	4 cut(s)	981, 1557, 2388, 2488
EcoT38I	GRGCYC	1 cut(s)	84
Esp3I	CGTCTC	3 cut(s)	1153, 1717, 1984
FalI	AAGNNNNNCTT	4 cut(s)	1470, 1502, 2301, 2333
FaqI	GGGAC	2 cut(s)	101, 376
FauI	CCCGC	2 cut(s)	82, 118
FauNDI	CATATG	2 cut(s)	1375, 2206
FblI	GTMKAC	2 cut(s)	1452, 2283
FokI	GGATG	6 cut(s)	56, 271, 371, 966, 1367, 2198
FriOI	GRGCYC	1 cut(s)	84
FspBI	CTAG	1 cut(s)	2570
GlaI	GCGC	2 cut(s)	9, 16
GsaI	CCCAGC	3 cut(s)	1020, 1584, 1851
GsuI	CTGGAG	1 cut(s)	678
HgaI	GACGC	4 cut(s)	14, 179, 1448, 2279
HhaI	GCGC	2 cut(s)	10, 17
Hin6I	GCGC	2 cut(s)	8, 15
HinP1I	GCGC	2 cut(s)	8, 15
HindIII	AAGCTT	3 cut(s)	1466, 2297, 2517
HphI	GGTGA	7 cut(s)	185, 782, 1333, 1370, 2164, 2201, 2585
Hpy166II	GTNNAC	3 cut(s)	677, 1453, 2284
Hpy8I	GTNNAC	3 cut(s)	677, 1453, 2284
Hpy99I	CGWCG	5 cut(s)	15, 212, 304, 340, 346
HpyAV	CCTTC	4 cut(s)	34, 757, 1466, 2297
HpyCH4III	ACNGT	6 cut(s)	28, 208, 552, 1434, 2265, 2440
HpyCH4IV	ACGT	5 cut(s)	604, 811, 1146, 1710, 1977
HpyF3I	CTNAG	5 cut(s)	561, 570, 630, 933, 2503
HpySE526I	ACGT	5 cut(s)	604, 811, 1146, 1710, 1977
HspAI	GCGC	2 cut(s)	8, 15
Kpn2I	TCCGGA	2 cut(s)	104, 238
KpnI	GGTACC	1 cut(s)	406
KroI	GCCGGC	1 cut(s)	152
KroNI	GCCGGC	1 cut(s)	154
Kzo9I	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
LmnI	GCTCC	3 cut(s)	422, 665, 2411
Lsp1109I	GCAGC	5 cut(s)	595, 607, 1324, 2155, 2401
LweI	GCATC	6 cut(s)	240, 699, 746, 988, 2572, 2665
MaeI	CTAG	1 cut(s)	2570
MaeII	ACGT	5 cut(s)	604, 811, 1146, 1710, 1977
MaeIII	GTNAC	7 cut(s)	191, 290, 1142, 1706, 1973, 2392, 2707
MalI	GATC	9 cut(s)	32, 179, 215, 774, 945, 972, 1381, 2212, 2577
MboI	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
MboII	GAAGA	5 cut(s)	52, 648, 684, 732, 2616
MflI	RGATCY	1 cut(s)	943
MhlI	GDGCHC	3 cut(s)	84, 589, 2745
MmeI	TCCRAC	4 cut(s)	282, 979, 1543, 1810
Mph1103I	ATGCAT	4 cut(s)	981, 1557, 2388, 2488
MroI	TCCGGA	2 cut(s)	104, 238
MroNI	GCCGGC	1 cut(s)	152
MseI	TTAA	7 cut(s)	1059, 1124, 1623, 1688, 1890, 1955, 2666
MslI	CAYNNNNRTG	5 cut(s)	1416, 1533, 2247, 2364, 2738
MspA1I	CMGCKG	2 cut(s)	620, 2687
MspR9I	CCNGG	3 cut(s)	50, 444, 729
Mva1269I	GAATGC	3 cut(s)	1169, 1733, 2000
MvaI	CCWGG	2 cut(s)	50, 729
MvnI	CGCG	7 cut(s)	8, 10, 15, 190, 212, 1459, 2290
NaeI	GCCGGC	1 cut(s)	154
NciI	CCSGG	1 cut(s)	444
NdeI	CATATG	2 cut(s)	1375, 2206
NdeII	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
NgoMIV	GCCGGC	1 cut(s)	152
NlaIV	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
NmeAIII	GCCGAG	2 cut(s)	103, 860
NmuCI	GTSAC	2 cut(s)	191, 2707
NruI	TCGCGA	1 cut(s)	212
NsiI	ATGCAT	4 cut(s)	981, 1557, 2388, 2488
NspI	RCATGY	3 cut(s)	1337, 2168, 2466
OliI	CACNNNNGTG	1 cut(s)	2738
PaeI	GCATGC	2 cut(s)	1337, 2168
PaeR7I	CTCGAG	2 cut(s)	433, 947
PagI	TCATGA	2 cut(s)	174, 2530
PcsI	WCGNNNNNNNCGW	2 cut(s)	19, 341
PctI	GAATGC	3 cut(s)	1169, 1733, 2000
PdiI	GCCGGC	1 cut(s)	154
PfeI	GAWTC	6 cut(s)	143, 242, 263, 458, 2549, 2725
PflFI	GACNNNGTC	1 cut(s)	206
PinAI	ACCGGT	1 cut(s)	88
Ppu21I	YACGTR	1 cut(s)	812
PpuMI	RGGWCCY	1 cut(s)	318
PshAI	GACNNNNGTC	3 cut(s)	9, 1458, 2289
PsiI	TTATAA	6 cut(s)	993, 1208, 1292, 1772, 2039, 2123
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	2 cut(s)	48, 727
PspFI	CCCAGC	3 cut(s)	1016, 1580, 1847
PspGI	CCWGG	2 cut(s)	48, 727
PspN4I	GGNNCC	7 cut(s)	98, 109, 237, 319, 404, 418, 513
PspPI	GGNCC	7 cut(s)	43, 96, 107, 318, 394, 1507, 2338
PspPPI	RGGWCCY	1 cut(s)	318
PspXI	VCTCGAGB	1 cut(s)	433
PstI	CTGCAG	1 cut(s)	594
PsuI	RGATCY	1 cut(s)	943
PsyI	GACNNNGTC	1 cut(s)	206
RruI	TCGCGA	1 cut(s)	212
RsaI	GTAC	5 cut(s)	404, 1519, 2350, 2541, 2754
RsaNI	GTAC	5 cut(s)	403, 1518, 2349, 2540, 2753
RseI	CAYNNNNRTG	5 cut(s)	1416, 1533, 2247, 2364, 2738
SaqAI	TTAA	7 cut(s)	1059, 1124, 1623, 1688, 1890, 1955, 2666
Sau3AI	GATC	9 cut(s)	30, 177, 213, 772, 943, 970, 1379, 2210, 2575
Sau96I	GGNCC	7 cut(s)	43, 96, 107, 318, 394, 1507, 2338
SbfI	CCTGCAGG	1 cut(s)	594
ScrFI	CCNGG	3 cut(s)	50, 444, 729
SdaI	CCTGCAGG	1 cut(s)	594
SduI	GDGCHC	3 cut(s)	84, 589, 2745
SfaNI	GCATC	6 cut(s)	240, 699, 746, 988, 2572, 2665
SfcI	CTRYAG	1 cut(s)	590
Sfr274I	CTCGAG	2 cut(s)	433, 947
SinI	GGWCC	5 cut(s)	43, 96, 107, 318, 394
SlaI	CTCGAG	2 cut(s)	433, 947
SmiMI	CAYNNNNRTG	5 cut(s)	1416, 1533, 2247, 2364, 2738
SmlI	CTYRAG	2 cut(s)	433, 947
SmoI	CTYRAG	2 cut(s)	433, 947
SphI	GCATGC	2 cut(s)	1337, 2168
Sse8387I	CCTGCAGG	1 cut(s)	594
SspMI	CTAG	1 cut(s)	2570
StyD4I	CCNGG	3 cut(s)	48, 442, 727
TaaI	ACNGT	6 cut(s)	28, 208, 552, 1434, 2265, 2440
TaiI	ACGT	5 cut(s)	607, 814, 1149, 1713, 1980
TaqII	GACCGA	3 cut(s)	382, 1299, 2130
TatI	WGTACW	3 cut(s)	1517, 2348, 2539
TauI	GCSGC	5 cut(s)	227, 256, 417, 467, 620
TfiI	GAWTC	6 cut(s)	143, 242, 263, 458, 2549, 2725
Tru1I	TTAA	7 cut(s)	1059, 1124, 1623, 1688, 1890, 1955, 2666
Tru9I	TTAA	7 cut(s)	1059, 1124, 1623, 1688, 1890, 1955, 2666
TscAI	CASTG	4 cut(s)	404, 750, 2464, 2716
TseFI	GTSAC	2 cut(s)	191, 2707
TseI	GCWGC	5 cut(s)	608, 620, 1337, 2168, 2414
Tsp45I	GTSAC	2 cut(s)	191, 2707
TspRI	CASTG	4 cut(s)	404, 750, 2464, 2716
Tth111I	GACNNNGTC	1 cut(s)	206
VpaK11BI	GGWCC	5 cut(s)	43, 96, 107, 318, 394
XagI	CCTNNNNNAGG	1 cut(s)	593
XapI	RAATTY	1 cut(s)	2662
XceI	RCATGY	3 cut(s)	1337, 2168, 2466
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1826
XhoI	CTCGAG	2 cut(s)	433, 947
XmiI	GTMKAC	2 cut(s)	1452, 2283
XspI	CTAG	1 cut(s)	2570
Zsp2I	ATGCAT	4 cut(s)	981, 1557, 2388, 2488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.