pycom07g08950

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
8145093 .. 8148933
3841 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g08950.1

Sequence Viewer

Length: 1470 bp
ATGGGCCCTGAATTGGAGCCGAAACCAAAGTCGGGAACTGGAATGGAACTGTCAGTTGCTAAGGATGGAAGTATCAACCGGGACCTAGAAGATAAACTTATGCCTTGTGTAAGTAACTACAAAGATAATATTTTTGACATGGAAACGCGATTGGTTGGACAAACTTCTGCATCAAATGTAAGGGAGAATGTGGAGGTAAACAGAACTGGGTTTCCAAGTCCTAATGTTGTGCAGATCGTTGAAAGCGAATGCGGGGATTTGACGGAGAGTTCGAGTTCTTTTGGTGATACAACTTCAGGGACAGAGAATGGTTATGTGTCGGATGGTGATGAAGTTCAGTCGCCGTTGCATGGAAATGAGTTCGCCCCTTTCTATGATGAATATTTTGGTGCATTTGAAACAAGGAGGAAAAGGTTGACCACTCATTGGAATAAGTTTATACGTCCTCTTATGTGGCGCTTGAAATGGCTGGAACTGAAGATTAAGGAACTTCAGTCTCAGGACAAAAAATATGATTTACAGCTTGCAAAGTATGCCCAAATAGAGCAGTCTGAATTTGATGCAATGTCAAAGTTAACGAAAAGGAAGAAAAGAAAGAGAGTTGAAGATACTACCAATATAGCATGTTATATGTCCCAACATAATCTTTTCTCCTATGAAAGTAAGAGGTCTCGTGCTAATGGTGTTTTCATGGAGGGAGACTGGGGTGATTCTGCAGGAGACAAAACTTGCACTGGCAATAAAGATGTTGAGACAAAGGATATATGGTCATCTCTTGAATTCAGGGATGGTAATAGTTCCTTGGAAGATATTCTTTGGAAGATTGAAGTGGTACATTCAAAAGTATGGAAGTTGAAGACTCGAGTGGACAAGGTCGTGAAGGAAAATCAAGGAAACATTTCTTCAGCTAACAACTTCCTAGTACCCTGTGATGCATTGATGGGATCTGCTCAAAATCCTGCTTTTCGTGGTGAAAATGGAAATAGATTACTGTTCGAAAGTTTATCCACTGCATCTATGCATATCAAATGTGACACGGGAGATCCATTCTTGCCTGAGATTGCAGTTTCAAGTCTTGCAGAGCTGACCCCTCGTCCTGGTATTACTGTAAACACAGATCAGCCTCTGGTTGGCAGTGTGCTTGAAAATGCCGGGGATATACACCTTATACCTAAGGATGCTGTCAAGGCTGAGCCATGTGATTTAGAAGTTAAAGATCCGTTCATACGGAAGCCTTGCATATCACCTCAAGAGCAGAAAACCAGTTGTCCTGCTCCAGTTTCGGAAACTGTGTTGCCCACAAATGTTCCTGTTCGGTATTCAGAAAAAGTGATGCCCACAAACTCCAGTGTACCTAATGCAACTGAAGAACCAGATTCCTCTACCAGGACTGCCTTGCCTTGGAACACAAGAAATCAAGGGAGGCGAAAACCCGGCTCGTACTTGAAAACTTTAAACCGGAAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

490

Amino Acids

54.74

Weight (kDa)

5.77

Isoelectric Point (pI)

55.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 426
AccII CGCG 1 cut(s) 148
AciI CCGC 1 cut(s) 252
AclWI GGATC 3 cut(s) 952, 1037, 1211
AcsI RAATTY 2 cut(s) 554, 779
AcuI CTGAAG 5 cut(s) 279, 476, 497, 888, 1386
AfaI GTAC 4 cut(s) 834, 924, 1353, 1442
AfiI CCNNNNNNNGG 8 cut(s) 13, 32, 350, 426, 1097, 1130, 1386, 1401
AhdI GACNNNNNGTC 1 cut(s) 1092
AjnI CCWGG 2 cut(s) 1096, 1385
AloI GAACNNNNNNTCC 2 cut(s) 196, 228
AluBI AGCT 3 cut(s) 523, 908, 1084
AluI AGCT 3 cut(s) 523, 908, 1084
Alw26I GTCTC 5 cut(s) 501, 675, 693, 714, 746
AlwI GGATC 3 cut(s) 952, 1037, 1211
AlwNI CAGNNNCTG 1 cut(s) 1126
Ama87I CYCGRG 1 cut(s) 861
AoxI GGCC 1 cut(s) 4
ApaI GGGCCC 1 cut(s) 8
ApoI RAATTY 2 cut(s) 554, 779
ArsI GACNNNNNNTTYG 4 cut(s) 14, 46, 253, 285
Asp700I GAANNNNTTC 2 cut(s) 810, 898
AspLEI GCGC 1 cut(s) 459
AspS9I GGNCC 3 cut(s) 4, 5, 82
AsuC2I CCSGG 3 cut(s) 80, 1153, 1434
AsuHPI GGTGA 5 cut(s) 296, 338, 719, 983, 1236
AsuII TTCGAA 1 cut(s) 996
AvaI CYCGRG 1 cut(s) 861
AvaII GGWCC 1 cut(s) 82
AxyI CCTNAGG 1 cut(s) 1173
BaeGI GKGCMC 1 cut(s) 8
BanII GRGCYC 1 cut(s) 8
BauI CACGAG 1 cut(s) 672
BbsI GAAGAC 1 cut(s) 863
BccI CCATC 4 cut(s) 59, 317, 782, 934
BceAI ACGGC 1 cut(s) 328
BciT130I CCWGG 2 cut(s) 1098, 1387
BcnI CCSGG 3 cut(s) 80, 1153, 1434
BcoDI GTCTC 5 cut(s) 501, 675, 693, 714, 746
BfaI CTAG 2 cut(s) 86, 920
BfmI CTRYAG 1 cut(s) 714
BfoI RGCGCY 1 cut(s) 460
BlpI GCTNAGC 1 cut(s) 1191
Bme1390I CCNGG 5 cut(s) 80, 1098, 1153, 1387, 1434
Bme18I GGWCC 1 cut(s) 82
BmeRI GACNNNNNGTC 1 cut(s) 1092
BmeT110I CYCGRG 1 cut(s) 861
BmgT120I GGNCC 3 cut(s) 4, 5, 82
BmiI GGNNCC 3 cut(s) 6, 18, 83
BmrFI CCNGG 5 cut(s) 80, 1098, 1153, 1387, 1434
BmrI ACTGGG 2 cut(s) 216, 712
BmsI GCATC 6 cut(s) 179, 550, 922, 1022, 1168, 1323
BmuI ACTGGG 2 cut(s) 216, 712
BpiI GAAGAC 1 cut(s) 863
BpmI CTGGAG 2 cut(s) 1260, 1330
Bpu10I CCTNAGC 1 cut(s) 60
Bpu1102I GCTNAGC 1 cut(s) 1191
Bpu14I TTCGAA 1 cut(s) 996
BpuEI CTTGAG 1 cut(s) 1233
BpuMI CCSGG 3 cut(s) 80, 1153, 1434
BsaI GGTCTC 1 cut(s) 675
BsaJI CCNNGG 3 cut(s) 801, 1152, 1400
BsaWI WCCGGW 1 cut(s) 1458
Bsc4I CCNNNNNNNGG 8 cut(s) 13, 32, 350, 426, 1097, 1130, 1386, 1401
Bse1I ACTGG 7 cut(s) 43, 211, 707, 739, 1263, 1277, 1347
Bse21I CCTNAGG 1 cut(s) 1173
Bse3DI GCAATG 1 cut(s) 570
BseBI CCWGG 2 cut(s) 1098, 1387
BseDI CCNNGG 3 cut(s) 801, 1152, 1400
BseGI GGATG 4 cut(s) 70, 328, 793, 1183
BseLI CCNNNNNNNGG 8 cut(s) 13, 32, 350, 426, 1097, 1130, 1386, 1401
BseMI GCAATG 1 cut(s) 570
BseMII CTCAG 3 cut(s) 512, 1047, 1182
BseNI ACTGG 7 cut(s) 43, 211, 707, 739, 1263, 1277, 1347
BseSI GKGCMC 1 cut(s) 8
BsgI GTGCAG 1 cut(s) 251
Bsh1236I CGCG 1 cut(s) 148
BshFI GGCC 1 cut(s) 6
BsiHKCI CYCGRG 1 cut(s) 861
BsiSI CCGG 4 cut(s) 79, 1152, 1434, 1459
BslFI GGGAC 3 cut(s) 95, 313, 619
BslI CCNNNNNNNGG 8 cut(s) 13, 32, 350, 426, 1097, 1130, 1386, 1401
BsmAI GTCTC 5 cut(s) 501, 675, 693, 714, 746
BsmFI GGGAC 3 cut(s) 95, 313, 619
BsmI GAATGC 1 cut(s) 254
BsnI GGCC 1 cut(s) 6
Bso31I GGTCTC 1 cut(s) 675
BsoBI CYCGRG 1 cut(s) 861
Bsp119I TTCGAA 1 cut(s) 996
Bsp120I GGGCCC 1 cut(s) 4
Bsp1286I GDGCHC 1 cut(s) 8
Bsp143I GATC 5 cut(s) 234, 944, 1042, 1117, 1216
Bsp1720I GCTNAGC 1 cut(s) 1191
BspACI CCGC 1 cut(s) 252
BspANI GGCC 1 cut(s) 6
BspCNI CTCAG 3 cut(s) 511, 1048, 1183
BspFNI CGCG 1 cut(s) 148
BspLI GGNNCC 3 cut(s) 6, 18, 83
BspMAI CTGCAG 1 cut(s) 718
BspPI GGATC 3 cut(s) 952, 1037, 1211
BspT104I TTCGAA 1 cut(s) 996
BspTNI GGTCTC 1 cut(s) 675
BsrDI GCAATG 1 cut(s) 570
BsrI ACTGG 7 cut(s) 43, 211, 707, 739, 1263, 1277, 1347
BssECI CCNNGG 3 cut(s) 801, 1152, 1400
BssMI GATC 5 cut(s) 234, 944, 1042, 1117, 1216
BssSI CACGAG 1 cut(s) 672
BssT1I CCWWGG 2 cut(s) 801, 1400
Bst2BI CACGAG 1 cut(s) 672
Bst2UI CCWGG 2 cut(s) 1098, 1387
Bst4CI ACNGT 4 cut(s) 51, 993, 1108, 1291
BstAPI GCANNNNNTGC 1 cut(s) 533
BstBI TTCGAA 1 cut(s) 996
BstC8I GCNNGC 1 cut(s) 525
BstDEI CTNAG 5 cut(s) 60, 498, 1056, 1173, 1191
BstENI CCTNNNNNAGG 1 cut(s) 1384
BstF5I GGATG 4 cut(s) 70, 328, 793, 1183
BstFNI CGCG 1 cut(s) 148
BstH2I RGCGCY 1 cut(s) 460
BstHHI GCGC 1 cut(s) 459
BstKTI GATC 5 cut(s) 237, 947, 1045, 1120, 1219
BstMAI GTCTC 5 cut(s) 501, 675, 693, 714, 746
BstMBI GATC 5 cut(s) 234, 944, 1042, 1117, 1216
BstMWI GCNNNNNNNGC 2 cut(s) 533, 1187
BstNI CCWGG 2 cut(s) 1098, 1387
BstNSI RCATGY 1 cut(s) 627
BstSCI CCNGG 5 cut(s) 78, 1096, 1151, 1385, 1432
BstSFI CTRYAG 1 cut(s) 714
BstSLI GKGCMC 1 cut(s) 8
BstUI CGCG 1 cut(s) 148
BstV2I GAAGAC 1 cut(s) 863
BstX2I RGATCY 3 cut(s) 944, 1042, 1216
BstYI RGATCY 3 cut(s) 944, 1042, 1216
Bsu36I CCTNAGG 1 cut(s) 1173
BsuRI GGCC 1 cut(s) 6
BtsCI GGATG 4 cut(s) 70, 328, 793, 1183
BtsI GCAGTG 2 cut(s) 1008, 1141
BtsIMutI CAGTG 4 cut(s) 732, 1008, 1141, 1354
Cac8I GCNNGC 1 cut(s) 525
CaiI CAGNNNCTG 1 cut(s) 1126
CfoI GCGC 1 cut(s) 459
Cfr13I GGNCC 3 cut(s) 4, 5, 82
Csp6I GTAC 4 cut(s) 833, 923, 1352, 1441
CviAII CATG 5 cut(s) 139, 350, 624, 691, 1197
CviQI GTAC 4 cut(s) 833, 923, 1352, 1441
DdeI CTNAG 5 cut(s) 60, 498, 1056, 1173, 1191
DpnI GATC 5 cut(s) 236, 946, 1044, 1119, 1218
DpnII GATC 5 cut(s) 234, 944, 1042, 1117, 1216
DraI TTTAAA 1 cut(s) 1455
DriI GACNNNNNGTC 1 cut(s) 1092
Eam1105I GACNNNNNGTC 1 cut(s) 1092
Eco130I CCWWGG 2 cut(s) 801, 1400
Eco24I GRGCYC 1 cut(s) 8
Eco31I GGTCTC 1 cut(s) 675
Eco47I GGWCC 1 cut(s) 82
Eco57I CTGAAG 5 cut(s) 279, 476, 497, 888, 1386
Eco81I CCTNAGG 1 cut(s) 1173
Eco88I CYCGRG 1 cut(s) 861
EcoNI CCTNNNNNAGG 1 cut(s) 1384
EcoO109I RGGNCCY 2 cut(s) 5, 82
EcoRI GAATTC 1 cut(s) 779
EcoRII CCWGG 2 cut(s) 1096, 1385
EcoT14I CCWWGG 2 cut(s) 801, 1400
EcoT22I ATGCAT 2 cut(s) 937, 1023
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 2 cut(s) 801, 1400
FaeI CATG 5 cut(s) 142, 353, 627, 694, 1200
FalI AAGNNNNNCTT 4 cut(s) 81, 113, 798, 830
FaqI GGGAC 3 cut(s) 95, 313, 619
FatI CATG 5 cut(s) 138, 349, 623, 690, 1196
FauI CCCGC 1 cut(s) 245
FokI GGATG 4 cut(s) 77, 335, 800, 1190
FriOI GRGCYC 1 cut(s) 8
FspBI CTAG 2 cut(s) 86, 920
GlaI GCGC 1 cut(s) 458
GsuI CTGGAG 2 cut(s) 1260, 1330
HaeII RGCGCY 1 cut(s) 460
HaeIII GGCC 1 cut(s) 6
HapII CCGG 4 cut(s) 79, 1152, 1434, 1459
HhaI GCGC 1 cut(s) 459
Hin1II CATG 5 cut(s) 142, 353, 627, 694, 1200
Hin6I GCGC 1 cut(s) 457
HinP1I GCGC 1 cut(s) 457
HincII GTYRAC 2 cut(s) 417, 576
HindII GTYRAC 2 cut(s) 417, 576
HinfI GANTC 3 cut(s) 710, 859, 1376
HpaI GTTAAC 1 cut(s) 576
HpaII CCGG 4 cut(s) 79, 1152, 1434, 1459
HphI GGTGA 5 cut(s) 296, 338, 719, 983, 1236
Hpy166II GTNNAC 6 cut(s) 199, 417, 576, 868, 1111, 1352
Hpy188I TCNGA 4 cut(s) 322, 553, 1285, 1324
Hpy188III TCNNGA 5 cut(s) 33, 500, 776, 877, 1250
Hpy8I GTNNAC 6 cut(s) 199, 417, 576, 868, 1111, 1352
HpyAV CCTTC 1 cut(s) 874
HpyCH4III ACNGT 4 cut(s) 51, 993, 1108, 1291
HpyCH4IV ACGT 1 cut(s) 442
HpyF10VI GCNNNNNNNGC 2 cut(s) 533, 1187
HpyF3I CTNAG 5 cut(s) 60, 498, 1056, 1173, 1191
HpySE526I ACGT 1 cut(s) 442
Hsp92II CATG 5 cut(s) 142, 353, 627, 694, 1200
HspAI GCGC 1 cut(s) 457
KspAI GTTAAC 1 cut(s) 576
Kzo9I GATC 5 cut(s) 234, 944, 1042, 1117, 1216
LmnI GCTCC 2 cut(s) 16, 1279
LweI GCATC 6 cut(s) 179, 550, 922, 1022, 1168, 1323
MaeI CTAG 2 cut(s) 86, 920
MaeII ACGT 1 cut(s) 442
MaeIII GTNAC 2 cut(s) 113, 1031
MalI GATC 5 cut(s) 236, 946, 1044, 1119, 1218
MboI GATC 5 cut(s) 234, 944, 1042, 1117, 1216
MboII GAAGA 9 cut(s) 101, 490, 598, 617, 818, 832, 868, 894, 1379
MflI RGATCY 3 cut(s) 944, 1042, 1216
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 3 cut(s) 11, 554, 779
MlyI GAGTC 1 cut(s) 853
MmeI TCCRAC 2 cut(s) 136, 300
Mph1103I ATGCAT 2 cut(s) 937, 1023
MroXI GAANNNNTTC 2 cut(s) 810, 898
MseI TTAA 4 cut(s) 483, 575, 1212, 1454
MslI CAYNNNNRTG 1 cut(s) 354
MspI CCGG 4 cut(s) 79, 1152, 1434, 1459
MspR9I CCNGG 5 cut(s) 80, 1098, 1153, 1387, 1434
Mva1269I GAATGC 1 cut(s) 254
MvaI CCWGG 2 cut(s) 1098, 1387
MvnI CGCG 1 cut(s) 148
MwoI GCNNNNNNNGC 2 cut(s) 533, 1187
NciI CCSGG 3 cut(s) 80, 1153, 1434
NdeII GATC 5 cut(s) 234, 944, 1042, 1117, 1216
NlaIII CATG 5 cut(s) 142, 353, 627, 694, 1200
NlaIV GGNNCC 3 cut(s) 6, 18, 83
NmuCI GTSAC 1 cut(s) 1031
NsiI ATGCAT 2 cut(s) 937, 1023
NspI RCATGY 1 cut(s) 627
NspV TTCGAA 1 cut(s) 996
PaeR7I CTCGAG 1 cut(s) 861
PcsI WCGNNNNNNNCGW 2 cut(s) 243, 269
PctI GAATGC 1 cut(s) 254
PdmI GAANNNNTTC 2 cut(s) 810, 898
PfeI GAWTC 2 cut(s) 710, 1376
PflFI GACNNNGTC 1 cut(s) 872
PflMI CCANNNNNTGG 1 cut(s) 426
PleI GAGTC 1 cut(s) 853
PpsI GAGTC 1 cut(s) 853
PpuMI RGGWCCY 1 cut(s) 82
Psp5II RGGWCCY 1 cut(s) 82
Psp6I CCWGG 2 cut(s) 1096, 1385
PspGI CCWGG 2 cut(s) 1096, 1385
PspN4I GGNNCC 3 cut(s) 6, 18, 83
PspOMI GGGCCC 1 cut(s) 4
PspPI GGNCC 3 cut(s) 4, 5, 82
PspPPI RGGWCCY 1 cut(s) 82
PspXI VCTCGAGB 1 cut(s) 861
PstI CTGCAG 1 cut(s) 718
PstNI CAGNNNCTG 1 cut(s) 1126
PsuI RGATCY 3 cut(s) 944, 1042, 1216
PsyI GACNNNGTC 1 cut(s) 872
RsaI GTAC 4 cut(s) 834, 924, 1353, 1442
RsaNI GTAC 4 cut(s) 833, 923, 1352, 1441
RseI CAYNNNNRTG 1 cut(s) 354
SaqAI TTAA 4 cut(s) 483, 575, 1212, 1454
Sau3AI GATC 5 cut(s) 234, 944, 1042, 1117, 1216
Sau96I GGNCC 3 cut(s) 4, 5, 82
SchI GAGTC 1 cut(s) 853
ScrFI CCNGG 5 cut(s) 80, 1098, 1153, 1387, 1434
SduI GDGCHC 1 cut(s) 8
SfaNI GCATC 6 cut(s) 179, 550, 922, 1022, 1168, 1323
SfcI CTRYAG 1 cut(s) 714
Sfr274I CTCGAG 1 cut(s) 861
SfuI TTCGAA 1 cut(s) 996
SinI GGWCC 1 cut(s) 82
SlaI CTCGAG 1 cut(s) 861
SmiMI CAYNNNNRTG 1 cut(s) 354
SmlI CTYRAG 2 cut(s) 861, 1248
SmoI CTYRAG 2 cut(s) 861, 1248
Sse9I AATT 3 cut(s) 11, 554, 779
SsiI CCGC 1 cut(s) 252
SspI AATATT 2 cut(s) 130, 383
SspMI CTAG 2 cut(s) 86, 920
StyD4I CCNGG 5 cut(s) 78, 1096, 1151, 1385, 1432
StyI CCWWGG 2 cut(s) 801, 1400
TaaI ACNGT 4 cut(s) 51, 993, 1108, 1291
TaiI ACGT 1 cut(s) 445
TaqI TCGA 3 cut(s) 272, 862, 996
TasI AATT 3 cut(s) 11, 554, 779
TfiI GAWTC 2 cut(s) 710, 1376
Tru1I TTAA 4 cut(s) 483, 575, 1212, 1454
Tru9I TTAA 4 cut(s) 483, 575, 1212, 1454
TscAI CASTG 4 cut(s) 739, 1015, 1141, 1354
TseFI GTSAC 1 cut(s) 1031
Tsp45I GTSAC 1 cut(s) 1031
TspDTI ATGAA 5 cut(s) 345, 393, 672, 679, 1213
TspGWI ACGGA 3 cut(s) 278, 1209, 1243
TspRI CASTG 4 cut(s) 739, 1015, 1141, 1354
Tth111I GACNNNGTC 1 cut(s) 872
Van91I CCANNNNNTGG 1 cut(s) 426
VpaK11BI GGWCC 1 cut(s) 82
XagI CCTNNNNNAGG 1 cut(s) 1384
XapI RAATTY 2 cut(s) 554, 779
XceI RCATGY 1 cut(s) 627
XhoI CTCGAG 1 cut(s) 861
XmnI GAANNNNTTC 2 cut(s) 810, 898
XspI CTAG 2 cut(s) 86, 920
Zsp2I ATGCAT 2 cut(s) 937, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.