RNA processing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39580 AT2G39580 |
| fragaria_vesca | FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 |
| malus_domestica | MD07G1193600.v1.1 |
| prunus_persica | Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 |
| pyrus_communis | pycom07g18270 |
| rosa_chinensis | RchiOBHm_Chr1g0366201 RchiOBHm_Chr1g0366211 |
| rosa_laevigata | RLG00000027361 |
| rosa_roxburghii | Rroxscaffold_4G00290440 |
| rosa_samantha | Rh1AG336200 Rh1BG297600 Rh1BG297700 Rh1CG313500 Rh1DG329300 |
| rosa_wichuraiana | Rw1G029820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 434 |
| AccB1I | GGYRCC | 1 cut(s) | 401 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3193 |
| AccI | GTMKAC | 3 cut(s) | 338, 4044, 5308 |
| AccII | CGCG | 2 cut(s) | 83, 666 |
| AccIII | TCCGGA | 1 cut(s) | 1502 |
| AcoI | YGGCCR | 4 cut(s) | 27, 1189, 2882, 4292 |
| AcuI | CTGAAG | 8 cut(s) | 201, 489, 788, 845, 2526, 2644, 4334, 4822 |
| AfaI | GTAC | 8 cut(s) | 333, 1107, 2122, 2383, 2998, 3237, 4193, 4435 |
| AflII | CTTAAG | 1 cut(s) | 2674 |
| AflIII | ACRYGT | 6 cut(s) | 941, 1255, 1730, 2941, 3531, 4453 |
| AgeI | ACCGGT | 1 cut(s) | 3615 |
| AjiI | CACGTC | 1 cut(s) | 770 |
| AjnI | CCWGG | 8 cut(s) | 391, 590, 1204, 1474, 2325, 3360, 3387, 4306 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2612, 2644, 4470, 4502 |
| Alw21I | GWGCWC | 6 cut(s) | 102, 483, 2050, 2598, 3445, 4734 |
| Alw26I | GTCTC | 7 cut(s) | 1144, 1421, 1644, 2262, 2807, 4094, 4238 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 224 |
| Ama87I | CYCGRG | 3 cut(s) | 714, 2768, 4227 |
| Aor13HI | TCCGGA | 1 cut(s) | 1502 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2378, 2410, 4237, 4269, 4514, 4546 |
| AsiGI | ACCGGT | 1 cut(s) | 3615 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2241, 3141 |
| AsuC2I | CCSGG | 1 cut(s) | 890 |
| AsuHPI | GGTGA | 7 cut(s) | 1377, 1390, 3075, 3356, 4004, 4879, 4934 |
| AsuNHI | GCTAGC | 1 cut(s) | 5066 |
| AvaI | CYCGRG | 3 cut(s) | 714, 2768, 4227 |
| AvaII | GGWCC | 9 cut(s) | 414, 689, 1160, 1208, 2260, 2781, 2861, 4387, 4895 |
| BaeGI | GKGCMC | 4 cut(s) | 406, 4234, 4348, 4609 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4017, 4050 |
| BalI | TGGCCA | 3 cut(s) | 1191, 2884, 4294 |
| BamHI | GGATCC | 2 cut(s) | 1354, 2329 |
| BanI | GGYRCC | 1 cut(s) | 401 |
| BanII | GRGCYC | 3 cut(s) | 102, 2553, 3445 |
| BauI | CACGAG | 2 cut(s) | 850, 3438 |
| BbsI | GAAGAC | 1 cut(s) | 138 |
| Bbv12I | GWGCWC | 6 cut(s) | 102, 483, 2050, 2598, 3445, 4734 |
| BceAI | ACGGC | 3 cut(s) | 42, 1449, 3167 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 941, 975, 1593, 1627, 2096, 2130, 2895, 2929 |
| BciT130I | CCWGG | 8 cut(s) | 393, 592, 1206, 1476, 2327, 3362, 3389, 4308 |
| BciVI | GTATCC | 1 cut(s) | 4018 |
| BclI | TGATCA | 4 cut(s) | 772, 829, 1183, 3352 |
| BcnI | CCSGG | 1 cut(s) | 890 |
| BcoDI | GTCTC | 7 cut(s) | 1144, 1421, 1644, 2262, 2807, 4094, 4238 |
| BfmI | CTRYAG | 3 cut(s) | 3499, 4041, 5262 |
| BfrI | CTTAAG | 1 cut(s) | 2674 |
| BfuI | GTATCC | 1 cut(s) | 4018 |
| BglII | AGATCT | 1 cut(s) | 4933 |
| BlpI | GCTNAGC | 1 cut(s) | 4591 |
| BmcAI | AGTACT | 1 cut(s) | 2998 |
| Bme1390I | CCNGG | 9 cut(s) | 393, 592, 890, 1206, 1476, 2327, 3362, 3389, 4308 |
| Bme18I | GGWCC | 9 cut(s) | 414, 689, 1160, 1208, 2260, 2781, 2861, 4387, 4895 |
| BmeT110I | CYCGRG | 3 cut(s) | 714, 2768, 4227 |
| BmgBI | CACGTC | 1 cut(s) | 770 |
| BmiI | GGNNCC | 9 cut(s) | 403, 415, 1356, 1480, 2331, 2863, 3267, 4166, 4504 |
| BmrFI | CCNGG | 9 cut(s) | 393, 592, 890, 1206, 1476, 2327, 3362, 3389, 4308 |
| BmrI | ACTGGG | 1 cut(s) | 1072 |
| BmtI | GCTAGC | 1 cut(s) | 5070 |
| BmuI | ACTGGG | 1 cut(s) | 1072 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1158 |
| BpiI | GAAGAC | 1 cut(s) | 138 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3406, 3438 |
| BpmI | CTGGAG | 3 cut(s) | 543, 1724, 3383 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1989, 3103 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4591 |
| BpuEI | CTTGAG | 9 cut(s) | 240, 893, 1811, 1870, 2600, 2715, 3425, 3467, 4091 |
| BpuMI | CCSGG | 1 cut(s) | 890 |
| Bsa29I | ATCGAT | 2 cut(s) | 650, 3562 |
| BsaAI | YACGTR | 1 cut(s) | 827 |
| BsaBI | GATNNNNATC | 2 cut(s) | 4179, 4512 |
| BsaJI | CCNNGG | 7 cut(s) | 195, 664, 2263, 2325, 2933, 3978, 4306 |
| BsaWI | WCCGGW | 6 cut(s) | 1502, 2778, 2806, 3615, 4909, 5113 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2612, 2642, 3521, 3551, 4470, 4500 |
| Bse118I | RCCGGY | 2 cut(s) | 3615, 5030 |
| Bse1I | ACTGG | 9 cut(s) | 526, 993, 1078, 1327, 1548, 1875, 1948, 2863, 4315 |
| Bse3DI | GCAATG | 8 cut(s) | 361, 2132, 3020, 3076, 3664, 3792, 4107, 5032 |
| Bse8I | GATNNNNATC | 2 cut(s) | 4179, 4512 |
| BseAI | TCCGGA | 1 cut(s) | 1502 |
| BseBI | CCWGG | 8 cut(s) | 393, 592, 1206, 1476, 2327, 3362, 3389, 4308 |
| BseCI | ATCGAT | 2 cut(s) | 650, 3562 |
| BseDI | CCNNGG | 7 cut(s) | 195, 664, 2263, 2325, 2933, 3978, 4306 |
| BseJI | GATNNNNATC | 2 cut(s) | 4179, 4512 |
| BseMI | GCAATG | 8 cut(s) | 361, 2132, 3020, 3076, 3664, 3792, 4107, 5032 |
| BseNI | ACTGG | 9 cut(s) | 526, 993, 1078, 1327, 1548, 1875, 1948, 2863, 4315 |
| BseRI | GAGGAG | 5 cut(s) | 63, 1561, 1662, 2565, 3330 |
| BseSI | GKGCMC | 4 cut(s) | 406, 4234, 4348, 4609 |
| BseX3I | CGGCCG | 1 cut(s) | 27 |
| BseYI | CCCAGC | 1 cut(s) | 2008 |
| BsgI | GTGCAG | 3 cut(s) | 2178, 3623, 4538 |
| Bsh1236I | CGCG | 2 cut(s) | 83, 666 |
| Bsh1285I | CGRYCG | 2 cut(s) | 30, 3616 |
| BshNI | GGYRCC | 1 cut(s) | 401 |
| BshTI | ACCGGT | 1 cut(s) | 3615 |
| BshVI | ATCGAT | 2 cut(s) | 650, 3562 |
| BsiEI | CGRYCG | 2 cut(s) | 30, 3616 |
| BsiHKAI | GWGCWC | 6 cut(s) | 102, 483, 2050, 2598, 3445, 4734 |
| BsiHKCI | CYCGRG | 3 cut(s) | 714, 2768, 4227 |
| BsiSI | CCGG | 8 cut(s) | 889, 1503, 2779, 2807, 3616, 4910, 5031, 5114 |
| BslFI | GGGAC | 6 cut(s) | 962, 2503, 2847, 2963, 4289, 5087 |
| BsmAI | GTCTC | 7 cut(s) | 1144, 1421, 1644, 2262, 2807, 4094, 4238 |
| BsmBI | CGTCTC | 1 cut(s) | 4238 |
| BsmFI | GGGAC | 6 cut(s) | 962, 2503, 2847, 2963, 4289, 5087 |
| BsmI | GAATGC | 7 cut(s) | 261, 601, 1663, 3127, 3690, 4618, 5281 |
| BsoBI | CYCGRG | 3 cut(s) | 714, 2768, 4227 |
| Bsp13I | TCCGGA | 1 cut(s) | 1502 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4591 |
| Bsp19I | CCATGG | 2 cut(s) | 2933, 3978 |
| BspDI | ATCGAT | 2 cut(s) | 650, 3562 |
| BspEI | TCCGGA | 1 cut(s) | 1502 |
| BspFNI | CGCG | 2 cut(s) | 83, 666 |
| BspLI | GGNNCC | 9 cut(s) | 403, 415, 1356, 1480, 2331, 2863, 3267, 4166, 4504 |
| BspOI | GCTAGC | 1 cut(s) | 5070 |
| BspQI | GCTCTTC | 2 cut(s) | 344, 1334 |
| BspT107I | GGYRCC | 1 cut(s) | 401 |
| BspTI | CTTAAG | 1 cut(s) | 2674 |
| BsrDI | GCAATG | 8 cut(s) | 361, 2132, 3020, 3076, 3664, 3792, 4107, 5032 |
| BsrFI | RCCGGY | 2 cut(s) | 3615, 5030 |
| BsrI | ACTGG | 9 cut(s) | 526, 993, 1078, 1327, 1548, 1875, 1948, 2863, 4315 |
| BssAI | RCCGGY | 2 cut(s) | 3615, 5030 |
| BssECI | CCNNGG | 7 cut(s) | 195, 664, 2263, 2325, 2933, 3978, 4306 |
| BssNAI | GTATAC | 1 cut(s) | 5309 |
| BssSI | CACGAG | 2 cut(s) | 850, 3438 |
| BssT1I | CCWWGG | 3 cut(s) | 2263, 2933, 3978 |
| Bst1107I | GTATAC | 1 cut(s) | 5309 |
| Bst2BI | CACGAG | 2 cut(s) | 850, 3438 |
| Bst2UI | CCWGG | 8 cut(s) | 393, 592, 1206, 1476, 2327, 3362, 3389, 4308 |
| Bst6I | CTCTTC | 7 cut(s) | 126, 344, 1334, 2145, 2805, 2830, 3791 |
| BstAFI | CTTAAG | 1 cut(s) | 2674 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 305, 4613 |
| BstBAI | YACGTR | 1 cut(s) | 827 |
| BstDSI | CCRYGG | 4 cut(s) | 195, 664, 2933, 3978 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 216, 2142 |
| BstFNI | CGCG | 2 cut(s) | 83, 666 |
| BstMAI | GTCTC | 7 cut(s) | 1144, 1421, 1644, 2262, 2807, 4094, 4238 |
| BstMCI | CGRYCG | 2 cut(s) | 30, 3616 |
| BstNI | CCWGG | 8 cut(s) | 393, 592, 1206, 1476, 2327, 3362, 3389, 4308 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1158 |
| BstSCI | CCNGG | 9 cut(s) | 391, 590, 888, 1204, 1474, 2325, 3360, 3387, 4306 |
| BstSFI | CTRYAG | 3 cut(s) | 3499, 4041, 5262 |
| BstSLI | GKGCMC | 4 cut(s) | 406, 4234, 4348, 4609 |
| BstUI | CGCG | 2 cut(s) | 83, 666 |
| BstV2I | GAAGAC | 1 cut(s) | 138 |
| BstX2I | RGATCY | 6 cut(s) | 710, 1354, 1699, 2329, 2846, 4933 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 764, 4815 |
| BstYI | RGATCY | 6 cut(s) | 710, 1354, 1699, 2329, 2846, 4933 |
| BstZ17I | GTATAC | 1 cut(s) | 5309 |
| BstZI | CGGCCG | 1 cut(s) | 27 |
| Bsu15I | ATCGAT | 2 cut(s) | 650, 3562 |
| BsuI | GTATCC | 1 cut(s) | 4018 |
| BsuTUI | ATCGAT | 2 cut(s) | 650, 3562 |
| BtgI | CCRYGG | 4 cut(s) | 195, 664, 2933, 3978 |
| BtgZI | GCGATG | 1 cut(s) | 5049 |
| BtrI | CACGTC | 1 cut(s) | 770 |
| BtsI | GCAGTG | 2 cut(s) | 466, 2794 |
| CaiI | CAGNNNCTG | 1 cut(s) | 224 |
| Cfr10I | RCCGGY | 2 cut(s) | 3615, 5030 |
| Cfr42I | CCGCGG | 1 cut(s) | 667 |
| ClaI | ATCGAT | 2 cut(s) | 650, 3562 |
| CseI | GACGC | 3 cut(s) | 29, 2738, 3014 |
| CsiI | ACCWGGT | 1 cut(s) | 1474 |
| Csp6I | GTAC | 8 cut(s) | 332, 1106, 2121, 2382, 2997, 3236, 4192, 4434 |
| CspAI | ACCGGT | 1 cut(s) | 3615 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2874, 2909, 4614, 4649 |
| CviQI | GTAC | 8 cut(s) | 332, 1106, 2121, 2382, 2997, 3236, 4192, 4434 |
| EaeI | YGGCCR | 4 cut(s) | 27, 1189, 2882, 4292 |
| EagI | CGGCCG | 1 cut(s) | 27 |
| Eam1104I | CTCTTC | 7 cut(s) | 126, 344, 1334, 2145, 2805, 2830, 3791 |
| EarI | CTCTTC | 7 cut(s) | 126, 344, 1334, 2145, 2805, 2830, 3791 |
| Ecl136II | GAGCTC | 2 cut(s) | 100, 3443 |
| EclXI | CGGCCG | 1 cut(s) | 27 |
| Eco130I | CCWWGG | 3 cut(s) | 2263, 2933, 3978 |
| Eco24I | GRGCYC | 3 cut(s) | 102, 2553, 3445 |
| Eco47I | GGWCC | 9 cut(s) | 414, 689, 1160, 1208, 2260, 2781, 2861, 4387, 4895 |
| Eco52I | CGGCCG | 1 cut(s) | 27 |
| Eco53kI | GAGCTC | 2 cut(s) | 100, 3443 |
| Eco57I | CTGAAG | 8 cut(s) | 201, 489, 788, 845, 2526, 2644, 4334, 4822 |
| Eco88I | CYCGRG | 3 cut(s) | 714, 2768, 4227 |
| EcoICRI | GAGCTC | 2 cut(s) | 100, 3443 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 216, 2142 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3265 |
| EcoRI | GAATTC | 1 cut(s) | 1200 |
| EcoRII | CCWGG | 8 cut(s) | 391, 590, 1204, 1474, 2325, 3360, 3387, 4306 |
| EcoT14I | CCWWGG | 3 cut(s) | 2263, 2933, 3978 |
| EcoT22I | ATGCAT | 6 cut(s) | 1665, 1986, 3690, 3704, 3743, 4660 |
| EcoT38I | GRGCYC | 3 cut(s) | 102, 2553, 3445 |
| ErhI | CCWWGG | 3 cut(s) | 2263, 2933, 3978 |
| Esp3I | CGTCTC | 1 cut(s) | 4238 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1034, 1066, 1384, 1416, 2668, 2700, 4266, 4298 |
| FaqI | GGGAC | 6 cut(s) | 962, 2503, 2847, 2963, 4289, 5087 |
| FauI | CCCGC | 2 cut(s) | 304, 2872 |
| FauNDI | CATATG | 3 cut(s) | 2705, 3133, 3628 |
| FbaI | TGATCA | 4 cut(s) | 772, 829, 1183, 3352 |
| FblI | GTMKAC | 3 cut(s) | 338, 4044, 5308 |
| FriOI | GRGCYC | 3 cut(s) | 102, 2553, 3445 |
| GsaI | CCCAGC | 1 cut(s) | 2012 |
| GsuI | CTGGAG | 3 cut(s) | 543, 1724, 3383 |
| HapII | CCGG | 8 cut(s) | 889, 1503, 2779, 2807, 3616, 4910, 5031, 5114 |
| HgaI | GACGC | 3 cut(s) | 29, 2738, 3014 |
| HincII | GTYRAC | 3 cut(s) | 2041, 2744, 4459 |
| HindII | GTYRAC | 3 cut(s) | 2041, 2744, 4459 |
| HindIII | AAGCTT | 3 cut(s) | 1559, 1761, 3336 |
| HpaI | GTTAAC | 2 cut(s) | 2041, 4459 |
| HpaII | CCGG | 8 cut(s) | 889, 1503, 2779, 2807, 3616, 4910, 5031, 5114 |
| HphI | GGTGA | 7 cut(s) | 1377, 1390, 3075, 3356, 4004, 4879, 4934 |
| Hpy99I | CGWCG | 6 cut(s) | 52, 155, 158, 161, 2606, 3030 |
| HpyCH4IV | ACGT | 6 cut(s) | 769, 826, 1730, 4335, 4524, 4797 |
| HpySE526I | ACGT | 6 cut(s) | 769, 826, 1730, 4335, 4524, 4797 |
| Kpn2I | TCCGGA | 1 cut(s) | 1502 |
| KroI | GCCGGC | 1 cut(s) | 5030 |
| KroNI | GCCGGC | 1 cut(s) | 5032 |
| Ksp22I | TGATCA | 4 cut(s) | 772, 829, 1183, 3352 |
| KspAI | GTTAAC | 2 cut(s) | 2041, 4459 |
| KspI | CCGCGG | 1 cut(s) | 667 |
| LguI | GCTCTTC | 2 cut(s) | 344, 1334 |
| LmnI | GCTCC | 8 cut(s) | 52, 97, 105, 190, 668, 980, 3667, 4729 |
| MabI | ACCWGGT | 1 cut(s) | 1474 |
| MaeII | ACGT | 6 cut(s) | 769, 826, 1730, 4335, 4524, 4797 |
| MflI | RGATCY | 6 cut(s) | 710, 1354, 1699, 2329, 2846, 4933 |
| MlsI | TGGCCA | 3 cut(s) | 1191, 2884, 4294 |
| MluNI | TGGCCA | 3 cut(s) | 1191, 2884, 4294 |
| MlyI | GAGTC | 5 cut(s) | 247, 2809, 3777, 4040, 4821 |
| MmeI | TCCRAC | 9 cut(s) | 30, 174, 441, 1235, 1902, 2777, 2824, 2992, 5001 |
| Mox20I | TGGCCA | 3 cut(s) | 1191, 2884, 4294 |
| Mph1103I | ATGCAT | 6 cut(s) | 1665, 1986, 3690, 3704, 3743, 4660 |
| MroI | TCCGGA | 1 cut(s) | 1502 |
| MroNI | GCCGGC | 1 cut(s) | 5030 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2241, 3141 |
| MscI | TGGCCA | 3 cut(s) | 1191, 2884, 4294 |
| Msp20I | TGGCCA | 3 cut(s) | 1191, 2884, 4294 |
| MspA1I | CMGCKG | 5 cut(s) | 666, 1148, 2867, 4392, 5019 |
| MspCI | CTTAAG | 1 cut(s) | 2674 |
| MspI | CCGG | 8 cut(s) | 889, 1503, 2779, 2807, 3616, 4910, 5031, 5114 |
| MspR9I | CCNGG | 9 cut(s) | 393, 592, 890, 1206, 1476, 2327, 3362, 3389, 4308 |
| Mva1269I | GAATGC | 7 cut(s) | 261, 601, 1663, 3127, 3690, 4618, 5281 |
| MvaI | CCWGG | 8 cut(s) | 393, 592, 1206, 1476, 2327, 3362, 3389, 4308 |
| MvnI | CGCG | 2 cut(s) | 83, 666 |
| NaeI | GCCGGC | 1 cut(s) | 5032 |
| NciI | CCSGG | 1 cut(s) | 890 |
| NcoI | CCATGG | 2 cut(s) | 2933, 3978 |
| NdeI | CATATG | 3 cut(s) | 2705, 3133, 3628 |
| NgoMIV | GCCGGC | 1 cut(s) | 5030 |
| NheI | GCTAGC | 1 cut(s) | 5066 |
| NlaIV | GGNNCC | 9 cut(s) | 403, 415, 1356, 1480, 2331, 2863, 3267, 4166, 4504 |
| NmuCI | GTSAC | 7 cut(s) | 517, 1378, 1540, 1550, 3254, 3344, 3435 |
| NsiI | ATGCAT | 6 cut(s) | 1665, 1986, 3690, 3704, 3743, 4660 |
| PaeI | GCATGC | 2 cut(s) | 3692, 3702 |
| PaeR7I | CTCGAG | 1 cut(s) | 714 |
| PciI | ACATGT | 5 cut(s) | 941, 1255, 2941, 3531, 4453 |
| PciSI | GCTCTTC | 2 cut(s) | 344, 1334 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 162 |
| PctI | GAATGC | 7 cut(s) | 261, 601, 1663, 3127, 3690, 4618, 5281 |
| PdiI | GCCGGC | 1 cut(s) | 5032 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2241, 3141 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3193 |
| PfoI | TCCNGGA | 1 cut(s) | 888 |
| PinAI | ACCGGT | 1 cut(s) | 3615 |
| PleI | GAGTC | 5 cut(s) | 247, 2809, 3777, 4040, 4820 |
| PpsI | GAGTC | 5 cut(s) | 247, 2809, 3777, 4040, 4820 |
| Ppu21I | YACGTR | 1 cut(s) | 827 |
| PscI | ACATGT | 5 cut(s) | 941, 1255, 2941, 3531, 4453 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1158 |
| PsiI | TTATAA | 1 cut(s) | 434 |
| Psp124BI | GAGCTC | 2 cut(s) | 102, 3445 |
| Psp6I | CCWGG | 8 cut(s) | 391, 590, 1204, 1474, 2325, 3360, 3387, 4306 |
| PspFI | CCCAGC | 1 cut(s) | 2008 |
| PspGI | CCWGG | 8 cut(s) | 391, 590, 1204, 1474, 2325, 3360, 3387, 4306 |
| PspN4I | GGNNCC | 9 cut(s) | 403, 415, 1356, 1480, 2331, 2863, 3267, 4166, 4504 |
| PstNI | CAGNNNCTG | 1 cut(s) | 224 |
| PsuI | RGATCY | 6 cut(s) | 710, 1354, 1699, 2329, 2846, 4933 |
| RsaI | GTAC | 8 cut(s) | 333, 1107, 2122, 2383, 2998, 3237, 4193, 4435 |
| RsaNI | GTAC | 8 cut(s) | 332, 1106, 2121, 2382, 2997, 3236, 4192, 4434 |
| SacI | GAGCTC | 2 cut(s) | 102, 3445 |
| SacII | CCGCGG | 1 cut(s) | 667 |
| SapI | GCTCTTC | 2 cut(s) | 344, 1334 |
| ScaI | AGTACT | 1 cut(s) | 2998 |
| SchI | GAGTC | 5 cut(s) | 247, 2809, 3777, 4040, 4821 |
| ScrFI | CCNGG | 9 cut(s) | 393, 592, 890, 1206, 1476, 2327, 3362, 3389, 4308 |
| SexAI | ACCWGGT | 1 cut(s) | 1474 |
| SfcI | CTRYAG | 3 cut(s) | 3499, 4041, 5262 |
| Sfr274I | CTCGAG | 1 cut(s) | 714 |
| Sfr303I | CCGCGG | 1 cut(s) | 667 |
| SgrBI | CCGCGG | 1 cut(s) | 667 |
| SinI | GGWCC | 9 cut(s) | 414, 689, 1160, 1208, 2260, 2781, 2861, 4387, 4895 |
| SlaI | CTCGAG | 1 cut(s) | 714 |
| SphI | GCATGC | 2 cut(s) | 3692, 3702 |
| SspI | AATATT | 1 cut(s) | 5155 |
| SstI | GAGCTC | 2 cut(s) | 102, 3445 |
| StyD4I | CCNGG | 9 cut(s) | 391, 590, 888, 1204, 1474, 2325, 3360, 3387, 4306 |
| StyI | CCWWGG | 3 cut(s) | 2263, 2933, 3978 |
| TaiI | ACGT | 6 cut(s) | 772, 829, 1733, 4338, 4527, 4800 |
| TaqI | TCGA | 9 cut(s) | 650, 715, 1613, 2553, 2604, 2905, 3028, 3562, 5072 |
| TatI | WGTACW | 3 cut(s) | 2120, 2996, 3235 |
| TseFI | GTSAC | 7 cut(s) | 517, 1378, 1540, 1550, 3254, 3344, 3435 |
| Tsp45I | GTSAC | 7 cut(s) | 517, 1378, 1540, 1550, 3254, 3344, 3435 |
| TspGWI | ACGGA | 6 cut(s) | 110, 319, 2480, 2590, 3327, 4987 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3193 |
| Vha464I | CTTAAG | 1 cut(s) | 2674 |
| VpaK11BI | GGWCC | 9 cut(s) | 414, 689, 1160, 1208, 2260, 2781, 2861, 4387, 4895 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 216, 2142 |
| XbaI | TCTAGA | 1 cut(s) | 1468 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 974, 1913 |
| XhoI | CTCGAG | 1 cut(s) | 714 |
| XmiI | GTMKAC | 3 cut(s) | 338, 4044, 5308 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2241, 3141 |
| ZrmI | AGTACT | 1 cut(s) | 2998 |
| Zsp2I | ATGCAT | 6 cut(s) | 1665, 1986, 3690, 3704, 3743, 4660 |