Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0003732

Physical Location & Seq

Genomic Coordinates Reverse (-)

43266124 .. 43270368

Gene Structure 4245 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG297700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGGAGCCCGACGGCGCAGCGCCGATGCAAGTCGAGTCCGCGGCGGACAAAAGCCCTAACTCGGAGCTCCCTCCCAAATCCAGAGAAGAAGGCGAGCTCTCTTCCGATGATAATGACGAAAATCCTGTTTTCTCGGTTGCACGTTCCACTGGTACTCCCGGGCCCATGCTGGTTCCACCAGTGAACAAATTCACCCATGGGAATCAAGCGGGGAAGGCTGTATCTCCTGCAAGCTCTACTGATATTCAGTGCCAAACCTCCAAGCAACCTACTTCCCAGAAGAGCAATGATGCGAACAGAGTACCGTTAAAACCTGCTACACCTGGATGGCGTCCTCCACGTGCCCACTCGGGGCCCAACAATAATCTTGTGATAAGCTTCTCAGATGATGACAGTCAGAGTGATTCTGAAGAAAAGGAGCGTGGGAAACTAAAAGCTTCACAAACTAAAAGTAATATGGCTCGAGGGAATGCTAATGGAAAACCACCCATTTCTTCACTTGCAAAACCAAACAAGTTGGGACAGCCTGCCAGAAATGTGAACAAAGTTATGCCCAAAAAGTTGTCTATGAATCGCACATTTATGACATCAATGGCGAATATCCGTGGAGTTAATTCTAGAGATTCTGTGCCTTCATCAGTTGAGCAAGGATCTCGAGCTGGAAATTTCAATTCCATGAACAAAAATATAGTGAACAGAGAGCGTGGATATGAACTTCAAGACTTGCGACAGCAGATTGCACTTAAGGAGACTGAACTGAAGCTCAAGGAAAGTGAACTGAAGCTTAAGTCTGCCCAGCGAACTAAGGAATCAGTTACATGCAAGGATGAGAATGCTAAGGGCCTGCACAGAGATGGAGCTGGTAAGTACAGTACAGGATATTCTGATGGTATGCAGACAGAACCAAAAGAGCCAGATAAAAAGCGTATAAAAGTCAGCGGTGCTTTTTCAACTCAGCTAACTGCACTAAGCCCACAAGAATTACCTGTTGCAAAACCTTTATTACCATCAAAAACCCCAGCAATGGAGGACAATACTCAATTGAACACCAGTAAGATTGATTATCTCCAAAAAGAAAATCAAGTGCGTCCAACAGAGTCGAGCATTGTAAAATGGCAAGATCCTAATGATAAACATGTTGCTGGAATGTTGGGAAATATACATACTGGACTGAAAGATGGTGCTGGCATCAATGCTAGATATATCCAGTCTGATGGGAGGGGTAAGCAGATGGATTCTGTTGTTACACCAAACCAGGGTAAATCACTGGCAAATATGACGTGCATTGATTTTCCAAATAACTTGAATAGTGTGGAGTTGAATCATACAAATACTAACACAAACACAAATAGCGGCCATCCAGAACCTGGATCCTTCTTAAACAATCCAACATCAGGAAAGAATTTAATGGGAAGTGGTGACCATCAGGAAACCATATCCATTGACAAGAGACTTGAGCCCTCATTCTACAGTAAATGTCAGGCACTCCTAAACAACACAAACCTCTCGAACTGTTTTGGTAATGCAAACGTTATAGGAGATGACAACATGAAGATGCAGTCATTGGTTCAAATGGAGGAAATGCTAGACAAGAATCTGGAGGAAGCACAAGAGCATAGGCGAAGGTGTGAAATTGAAGAACAAAATGCTCTTAAAGCTTATCGTAAAGCGCAGAGGGCTCTTCTTGAGGCGAATGCTACGTGTGATGTTCTTTATCGGAAAAGGGAACTATATTCTGCCGACTTCCGTGCTTATGTTATTAACAATCCCAGTTTGTTATGTTCCTCAAGGCAGAACGAACAAGCTGGACTTGGGTTGGATCACCCTAATAACTTGTCTGAAAATGTGAATTTGATACCCACGTCAAGCCATCAGATGCCGCCGGTCCAGAATGACTGCAATCTAGCGGTTATTGATTCCAACATCCAATGCGTTAACAGCGCTCAGATCCCGAATCCCTACCAGCATTTGAGTGGAGAAAACATTGGCTCAGAACCAGGCAGTGAACCTGACGCTAGTACATCTGAGCCAGTGCCTCTTCTGGGCAATACTGGCACAGATGGAGTTTGCTCTCCATCCAATGAACCAAATGGTTCAGCAAATGAAGATGATGATACATTTTCATTCGAAAATGAATCTGTTCAACCCAATGGTGAATGCCATCTTGTAGACAAACAAAAGGAGACAGATAATGAATCAAATAGGATAATGTCTATTGACCCCAACGAGGAATCTTTACTTCTCGAAAAAGCTTTGAGGTCTACACTATTTGCAAAGCTAGGAACAAAAAATGTGTCGAAGAACAGTGTTGTATGTAATGGCACAGGGATTGCAGTGGAACGAGAGGCTGAAAATGATGCAAGAAGTGAAGAACCACAAAAAGTAAACGGGAGTTCTCCCGTCTCAGAGGTGGAGAAAAATCAACAATCTGATATTGAAGGCGTTGATGTGCATGAAAAAAAGTTTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3H1

Protein Analysis

823

Amino Acids

89.83

Weight (kDa)

5.55

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39580 AT2G39580
fragaria_vesca	FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930 FvH4_7g21930
malus_domestica	MD07G1193600.v1.1
prunus_persica	Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1 Prupe.2G231200_v2.0.a1
pyrus_communis	pycom07g18270
rosa_chinensis	RchiOBHm_Chr1g0366201 RchiOBHm_Chr1g0366211
rosa_laevigata	RLG00000027361
rosa_roxburghii	Rroxscaffold_4G00290440
rosa_samantha	Rh1AG336200 Rh1BG297600 Rh1BG297700 Rh1CG313500 Rh1DG329300
rosa_wichuraiana	Rw1G029820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	322
AccB7I	CCANNNNNTGG	1 cut(s)	1367
AccI	GTMKAC	2 cut(s)	2169, 2261
AccII	CGCG	1 cut(s)	41
AciI	CCGC	8 cut(s)	39, 41, 44, 209, 939, 1353, 1880, 1907
AclI	AACGTT	1 cut(s)	1530
AclWI	GGATC	6 cut(s)	658, 1115, 1365, 1378, 1827, 1942
AcoI	YGGCCR	1 cut(s)	1354
AcsI	RAATTY	4 cut(s)	188, 664, 1402, 1849
AcuI	CTGAAG	3 cut(s)	429, 779, 800
AcvI	CACGTG	1 cut(s)	341
AcyI	GRCGYC	1 cut(s)	331
AfaI	GTAC	5 cut(s)	154, 303, 869, 874, 2020
AfeI	AGCGCT	1 cut(s)	1942
AfiI	CCNNNNNNNGG	8 cut(s)	61, 351, 1024, 1256, 1367, 1394, 2042, 2227
AflII	CTTAAG	2 cut(s)	743, 785
AflIII	ACRYGT	2 cut(s)	1135, 1700
AjiI	CACGTC	2 cut(s)	1281, 1863
AjnI	CCWGG	4 cut(s)	322, 1254, 1366, 1996
Alw21I	GWGCWC	2 cut(s)	69, 99
Alw26I	GTCTC	4 cut(s)	743, 1444, 2177, 2407
AlwI	GGATC	6 cut(s)	658, 1115, 1365, 1378, 1827, 1942
AlwNI	CAGNNNCTG	1 cut(s)	1367
Ama87I	CYCGRG	4 cut(s)	158, 349, 462, 654
Aor51HI	AGCGCT	1 cut(s)	1942
AoxI	GGCC	4 cut(s)	161, 353, 841, 1354
ApaI	GGGCCC	2 cut(s)	165, 357
ApeKI	GCWGC	1 cut(s)	17
ApoI	RAATTY	4 cut(s)	188, 664, 1402, 1849
ArsI	GACNNNNNNTTYG	2 cut(s)	2279, 2311
Asp700I	GAANNNNTTC	2 cut(s)	188, 2139
AspLEI	GCGC	4 cut(s)	17, 22, 1672, 1943
AspS9I	GGNCC	6 cut(s)	161, 162, 353, 354, 841, 1885
AsuC2I	CCSGG	2 cut(s)	159, 160
AsuHPI	GGTGA	4 cut(s)	184, 1430, 1814, 2165
AsuII	TTCGAA	1 cut(s)	2127
AvaI	CYCGRG	4 cut(s)	158, 349, 462, 654
AvaII	GGWCC	1 cut(s)	1885
BaeGI	GKGCMC	3 cut(s)	165, 346, 357
BaeI	ACNNNNGTAYC	2 cut(s)	1847, 1880
BamHI	GGATCC	1 cut(s)	1370
BanII	GRGCYC	7 cut(s)	9, 69, 99, 165, 357, 1461, 1681
BbrPI	CACGTG	1 cut(s)	341
Bbv12I	GWGCWC	2 cut(s)	69, 99
BbvI	GCAGC	1 cut(s)	29
BceAI	ACGGC	1 cut(s)	28
BcgI	CGANNNNNNTGC	4 cut(s)	635, 669, 1730, 1764
BciT130I	CCWGG	4 cut(s)	324, 1256, 1368, 1998
BcnI	CCSGG	2 cut(s)	159, 160
BcoDI	GTCTC	4 cut(s)	743, 1444, 2177, 2407
BfaI	CTAG	6 cut(s)	618, 1197, 1586, 1904, 2016, 2279
BfmI	CTRYAG	1 cut(s)	1468
BfoI	RGCGCY	2 cut(s)	23, 1944
BfrI	CTTAAG	2 cut(s)	743, 785
BfuAI	ACCTGC	1 cut(s)	322
BisI	GCNGC	4 cut(s)	18, 42, 1354, 1880
BlsI	GCNGC	4 cut(s)	19, 43, 1355, 1881
Bme1390I	CCNGG	6 cut(s)	159, 160, 324, 1256, 1368, 1998
Bme18I	GGWCC	1 cut(s)	1885
BmeT110I	CYCGRG	4 cut(s)	158, 349, 462, 654
BmgBI	CACGTC	2 cut(s)	1281, 1863
BmgT120I	GGNCC	6 cut(s)	161, 162, 353, 354, 841, 1885
BmiI	GGNNCC	6 cut(s)	6, 163, 174, 354, 355, 1372
BmrFI	CCNGG	6 cut(s)	159, 160, 324, 1256, 1368, 1998
BmrI	ACTGGG	1 cut(s)	1764
BmsI	GCATC	6 cut(s)	15, 280, 1197, 1545, 1866, 2347
BmuI	ACTGGG	1 cut(s)	1764
BpmI	CTGGAG	1 cut(s)	1619
Bpu10I	CCTNAGC	1 cut(s)	837
Bpu14I	TTCGAA	1 cut(s)	2127
BpuEI	CTTGAG	4 cut(s)	749, 1475, 1706, 1771
BpuMI	CCSGG	2 cut(s)	159, 160
BsaAI	YACGTR	2 cut(s)	341, 1701
BsaHI	GRCGYC	1 cut(s)	331
BsaJI	CCNNGG	5 cut(s)	39, 158, 196, 604, 1255
BsaXI	ACNNNNNCTCC	2 cut(s)	139, 169
Bsc4I	CCNNNNNNNGG	8 cut(s)	61, 351, 1024, 1256, 1367, 1394, 2042, 2227
Bse118I	RCCGGY	1 cut(s)	1882
Bse1I	ACTGG	9 cut(s)	154, 179, 1050, 1171, 1207, 1272, 1770, 2030, 2056
Bse3DI	GCAATG	2 cut(s)	292, 1029
BseBI	CCWGG	4 cut(s)	324, 1256, 1368, 1998
BseDI	CCNNGG	5 cut(s)	39, 158, 196, 604, 1255
BseGI	GGATG	5 cut(s)	332, 832, 1357, 1923, 2075
BseLI	CCNNNNNNNGG	8 cut(s)	61, 351, 1024, 1256, 1367, 1394, 2042, 2227
BseMI	GCAATG	2 cut(s)	292, 1029
BseMII	CTCAG	6 cut(s)	396, 968, 1958, 2004, 2016, 2418
BseNI	ACTGG	9 cut(s)	154, 179, 1050, 1171, 1207, 1272, 1770, 2030, 2056
BseSI	GKGCMC	3 cut(s)	165, 346, 357
BseXI	GCAGC	1 cut(s)	29
BseYI	CCCAGC	2 cut(s)	795, 1018
BsgI	GTGCAG	2 cut(s)	830, 948
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	4 cut(s)	163, 355, 843, 1356
BsiHKAI	GWGCWC	2 cut(s)	69, 99
BsiHKCI	CYCGRG	4 cut(s)	158, 349, 462, 654
BsiSI	CCGG	2 cut(s)	159, 1883
BslFI	GGGAC	1 cut(s)	534
BslI	CCNNNNNNNGG	8 cut(s)	61, 351, 1024, 1256, 1367, 1394, 2042, 2227
BsmAI	GTCTC	4 cut(s)	743, 1444, 2177, 2407
BsmBI	CGTCTC	1 cut(s)	2407
BsmFI	GGGAC	1 cut(s)	534
BsmI	GAATGC	4 cut(s)	475, 838, 1699, 2162
BsnI	GGCC	4 cut(s)	163, 355, 843, 1356
BsoBI	CYCGRG	4 cut(s)	158, 349, 462, 654
Bsp119I	TTCGAA	1 cut(s)	2127
Bsp120I	GGGCCC	2 cut(s)	161, 353
Bsp1286I	GDGCHC	8 cut(s)	9, 69, 99, 165, 346, 357, 1461, 1681
Bsp143I	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
Bsp19I	CCATGG	1 cut(s)	196
BspACI	CCGC	8 cut(s)	39, 41, 44, 209, 939, 1353, 1880, 1907
BspANI	GGCC	4 cut(s)	163, 355, 843, 1356
BspCNI	CTCAG	6 cut(s)	395, 967, 1957, 2003, 2017, 2417
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	6 cut(s)	6, 163, 174, 354, 355, 1372
BspMI	ACCTGC	1 cut(s)	322
BspPI	GGATC	6 cut(s)	658, 1115, 1365, 1378, 1827, 1942
BspQI	GCTCTTC	2 cut(s)	275, 1686
BspT104I	TTCGAA	1 cut(s)	2127
BspTI	CTTAAG	2 cut(s)	743, 785
BsrDI	GCAATG	2 cut(s)	292, 1029
BsrFI	RCCGGY	1 cut(s)	1882
BsrI	ACTGG	9 cut(s)	154, 179, 1050, 1171, 1207, 1272, 1770, 2030, 2056
BssAI	RCCGGY	1 cut(s)	1882
BssECI	CCNNGG	5 cut(s)	39, 158, 196, 604, 1255
BssMI	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
BssNI	GRCGYC	1 cut(s)	331
BssT1I	CCWWGG	1 cut(s)	196
Bst2UI	CCWGG	4 cut(s)	324, 1256, 1368, 1998
Bst4CI	ACNGT	6 cut(s)	306, 395, 872, 1472, 1514, 2306
Bst6I	CTCTTC	4 cut(s)	106, 275, 1686, 2043
BstACI	GRCGYC	1 cut(s)	331
BstAFI	CTTAAG	2 cut(s)	743, 785
BstBAI	YACGTR	2 cut(s)	341, 1701
BstBI	TTCGAA	1 cut(s)	2127
BstC8I	GCNNGC	5 cut(s)	95, 232, 528, 845, 1186
BstDEI	CTNAG	9 cut(s)	382, 804, 837, 954, 968, 1944, 1990, 2025, 2404
BstDSI	CCRYGG	3 cut(s)	39, 196, 604
BstEII	GGTNACC	1 cut(s)	1418
BstF5I	GGATG	5 cut(s)	332, 832, 1357, 1923, 2075
BstFNI	CGCG	1 cut(s)	41
BstH2I	RGCGCY	2 cut(s)	23, 1944
BstHHI	GCGC	4 cut(s)	17, 22, 1672, 1943
BstKTI	GATC	5 cut(s)	653, 1123, 1373, 1822, 1950
BstMAI	GTCTC	4 cut(s)	743, 1444, 2177, 2407
BstMBI	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
BstMWI	GCNNNNNNNGC	5 cut(s)	215, 1655, 1676, 1938, 2052
BstNI	CCWGG	4 cut(s)	324, 1256, 1368, 1998
BstNSI	RCATGY	2 cut(s)	822, 1139
BstPI	GGTNACC	1 cut(s)	1418
BstSCI	CCNGG	6 cut(s)	157, 158, 322, 1254, 1366, 1996
BstSFI	CTRYAG	1 cut(s)	1468
BstSLI	GKGCMC	3 cut(s)	165, 346, 357
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	1 cut(s)	29
BstX2I	RGATCY	4 cut(s)	650, 1120, 1370, 1947
BstXI	CCANNNNNNTGG	1 cut(s)	1214
BstYI	RGATCY	4 cut(s)	650, 1120, 1370, 1947
BsuRI	GGCC	4 cut(s)	163, 355, 843, 1356
BtgI	CCRYGG	3 cut(s)	39, 196, 604
BtrI	CACGTC	2 cut(s)	1281, 1863
BtsCI	GGATG	5 cut(s)	332, 832, 1357, 1923, 2075
BtsI	GCAGTG	2 cut(s)	2008, 2340
BtsIMutI	CAGTG	9 cut(s)	147, 186, 254, 1265, 2008, 2037, 2311, 2340, 2467
BveI	ACCTGC	1 cut(s)	322
Cac8I	GCNNGC	5 cut(s)	95, 232, 528, 845, 1186
CaiI	CAGNNNCTG	1 cut(s)	1367
CfoI	GCGC	4 cut(s)	17, 22, 1672, 1943
Cfr10I	RCCGGY	1 cut(s)	1882
Cfr13I	GGNCC	6 cut(s)	161, 162, 353, 354, 841, 1885
Cfr42I	CCGCGG	1 cut(s)	42
Cfr9I	CCCGGG	1 cut(s)	158
CseI	GACGC	3 cut(s)	320, 1076, 2021
Csp6I	GTAC	5 cut(s)	153, 302, 868, 873, 2019
CviAII	CATG	7 cut(s)	166, 197, 676, 819, 1136, 1549, 2453
CviQI	GTAC	5 cut(s)	153, 302, 868, 873, 2019
DdeI	CTNAG	9 cut(s)	382, 804, 837, 954, 968, 1944, 1990, 2025, 2404
DpnI	GATC	5 cut(s)	652, 1122, 1372, 1821, 1949
DpnII	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
EaeI	YGGCCR	1 cut(s)	1354
Eam1104I	CTCTTC	4 cut(s)	106, 275, 1686, 2043
EarI	CTCTTC	4 cut(s)	106, 275, 1686, 2043
EciI	GGCGGA	1 cut(s)	59
Ecl136II	GAGCTC	2 cut(s)	67, 97
Eco130I	CCWWGG	1 cut(s)	196
Eco24I	GRGCYC	7 cut(s)	9, 69, 99, 165, 357, 1461, 1681
Eco47I	GGWCC	1 cut(s)	1885
Eco47III	AGCGCT	1 cut(s)	1942
Eco53kI	GAGCTC	2 cut(s)	67, 97
Eco57I	CTGAAG	3 cut(s)	429, 779, 800
Eco72I	CACGTG	1 cut(s)	341
Eco88I	CYCGRG	4 cut(s)	158, 349, 462, 654
Eco91I	GGTNACC	1 cut(s)	1418
EcoICRI	GAGCTC	2 cut(s)	67, 97
EcoO109I	RGGNCCY	2 cut(s)	353, 841
EcoO65I	GGTNACC	1 cut(s)	1418
EcoRII	CCWGG	4 cut(s)	322, 1254, 1366, 1996
EcoT14I	CCWWGG	1 cut(s)	196
EcoT38I	GRGCYC	7 cut(s)	9, 69, 99, 165, 357, 1461, 1681
ErhI	CCWWGG	1 cut(s)	196
Esp3I	CGTCTC	1 cut(s)	2407
FaeI	CATG	7 cut(s)	169, 200, 679, 822, 1139, 1552, 2456
FalI	AAGNNNNNCTT	2 cut(s)	1794, 1826
FaqI	GGGAC	1 cut(s)	534
FatI	CATG	7 cut(s)	165, 196, 675, 818, 1135, 1548, 2452
FauI	CCCGC	1 cut(s)	202
FblI	GTMKAC	2 cut(s)	2169, 2261
Fnu4HI	GCNGC	4 cut(s)	18, 42, 1354, 1880
FokI	GGATG	5 cut(s)	339, 839, 1344, 1910, 2062
FriOI	GRGCYC	7 cut(s)	9, 69, 99, 165, 357, 1461, 1681
Fsp4HI	GCNGC	4 cut(s)	18, 42, 1354, 1880
FspBI	CTAG	6 cut(s)	618, 1197, 1586, 1904, 2016, 2279
GlaI	GCGC	4 cut(s)	16, 21, 1671, 1942
GluI	GCNGC	4 cut(s)	18, 42, 1354, 1880
GsaI	CCCAGC	2 cut(s)	799, 1022
GsuI	CTGGAG	1 cut(s)	1619
HaeII	RGCGCY	2 cut(s)	23, 1944
HaeIII	GGCC	4 cut(s)	163, 355, 843, 1356
HapII	CCGG	2 cut(s)	159, 1883
HgaI	GACGC	3 cut(s)	320, 1076, 2021
HhaI	GCGC	4 cut(s)	17, 22, 1672, 1943
Hin1I	GRCGYC	1 cut(s)	331
Hin1II	CATG	7 cut(s)	169, 200, 679, 822, 1139, 1552, 2456
Hin6I	GCGC	4 cut(s)	15, 20, 1670, 1941
HinP1I	GCGC	4 cut(s)	15, 20, 1670, 1941
HincII	GTYRAC	1 cut(s)	1936
HindII	GTYRAC	1 cut(s)	1936
HindIII	AAGCTT	5 cut(s)	376, 435, 782, 1656, 2250
HpaI	GTTAAC	1 cut(s)	1936
HpaII	CCGG	2 cut(s)	159, 1883
HphI	GGTGA	4 cut(s)	184, 1430, 1814, 2165
Hpy166II	GTNNAC	9 cut(s)	184, 541, 694, 776, 1936, 2006, 2170, 2262, 2386
Hpy8I	GTNNAC	9 cut(s)	184, 541, 694, 776, 1936, 2006, 2170, 2262, 2386
Hpy99I	CGWCG	1 cut(s)	14
HpyAV	CCTTC	6 cut(s)	83, 208, 642, 1384, 1617, 2432
HpyCH4III	ACNGT	6 cut(s)	306, 395, 872, 1472, 1514, 2306
HpyCH4IV	ACGT	6 cut(s)	142, 340, 1280, 1530, 1700, 1862
HpyF10VI	GCNNNNNNNGC	5 cut(s)	215, 1655, 1676, 1938, 2052
HpyF3I	CTNAG	9 cut(s)	382, 804, 837, 954, 968, 1944, 1990, 2025, 2404
HpySE526I	ACGT	6 cut(s)	142, 340, 1280, 1530, 1700, 1862
Hsp92I	GRCGYC	1 cut(s)	331
Hsp92II	CATG	7 cut(s)	169, 200, 679, 822, 1139, 1552, 2456
HspAI	GCGC	4 cut(s)	15, 20, 1670, 1941
KspAI	GTTAAC	1 cut(s)	1936
KspI	CCGCGG	1 cut(s)	42
Kzo9I	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
LguI	GCTCTTC	2 cut(s)	275, 1686
LmnI	GCTCC	5 cut(s)	4, 64, 72, 418, 857
Lsp1109I	GCAGC	1 cut(s)	29
LweI	GCATC	6 cut(s)	15, 280, 1197, 1545, 1866, 2347
MaeI	CTAG	6 cut(s)	618, 1197, 1586, 1904, 2016, 2279
MaeII	ACGT	6 cut(s)	142, 340, 1280, 1530, 1700, 1862
MaeIII	GTNAC	3 cut(s)	814, 1243, 1418
MalI	GATC	5 cut(s)	652, 1122, 1372, 1821, 1949
MboI	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
MfeI	CAATTG	1 cut(s)	1040
MflI	RGATCY	4 cut(s)	650, 1120, 1370, 1947
MhlI	GDGCHC	8 cut(s)	9, 69, 99, 165, 346, 357, 1461, 1681
MluCI	AATT	9 cut(s)	188, 613, 664, 670, 980, 1040, 1402, 1632, 1849
MlyI	GAGTC	2 cut(s)	44, 1106
MmeI	TCCRAC	4 cut(s)	1115, 1412, 1797, 1944
MroXI	GAANNNNTTC	2 cut(s)	188, 2139
MseI	TTAA	9 cut(s)	308, 612, 744, 786, 1379, 1406, 1653, 1761, 1935
MslI	CAYNNNNRTG	5 cut(s)	325, 581, 852, 1553, 1971
MspA1I	CMGCKG	2 cut(s)	41, 939
MspCI	CTTAAG	2 cut(s)	743, 785
MspI	CCGG	2 cut(s)	159, 1883
MspR9I	CCNGG	6 cut(s)	159, 160, 324, 1256, 1368, 1998
MteI	GCGCNGCGC	1 cut(s)	18
MunI	CAATTG	1 cut(s)	1040
Mva1269I	GAATGC	4 cut(s)	475, 838, 1699, 2162
MvaI	CCWGG	4 cut(s)	324, 1256, 1368, 1998
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	5 cut(s)	215, 1655, 1676, 1938, 2052
NciI	CCSGG	2 cut(s)	159, 160
NcoI	CCATGG	1 cut(s)	196
NdeII	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
NlaIII	CATG	7 cut(s)	169, 200, 679, 822, 1139, 1552, 2456
NlaIV	GGNNCC	6 cut(s)	6, 163, 174, 354, 355, 1372
NmuCI	GTSAC	1 cut(s)	1418
NspI	RCATGY	2 cut(s)	822, 1139
NspV	TTCGAA	1 cut(s)	2127
PaeR7I	CTCGAG	2 cut(s)	462, 654
PciI	ACATGT	1 cut(s)	1135
PciSI	GCTCTTC	2 cut(s)	275, 1686
PctI	GAATGC	4 cut(s)	475, 838, 1699, 2162
PdmI	GAANNNNTTC	2 cut(s)	188, 2139
PflMI	CCANNNNNTGG	1 cut(s)	1367
PkrI	GCNGC	4 cut(s)	19, 43, 1355, 1881
PleI	GAGTC	2 cut(s)	43, 1105
PmaCI	CACGTG	1 cut(s)	341
PmlI	CACGTG	1 cut(s)	341
PpsI	GAGTC	2 cut(s)	43, 1105
Ppu21I	YACGTR	2 cut(s)	341, 1701
PscI	ACATGT	1 cut(s)	1135
Psp124BI	GAGCTC	2 cut(s)	69, 99
Psp1406I	AACGTT	1 cut(s)	1530
Psp6I	CCWGG	4 cut(s)	322, 1254, 1366, 1996
PspCI	CACGTG	1 cut(s)	341
PspEI	GGTNACC	1 cut(s)	1418
PspFI	CCCAGC	2 cut(s)	795, 1018
PspGI	CCWGG	4 cut(s)	322, 1254, 1366, 1996
PspN4I	GGNNCC	6 cut(s)	6, 163, 174, 354, 355, 1372
PspOMI	GGGCCC	2 cut(s)	161, 353
PspPI	GGNCC	6 cut(s)	161, 162, 353, 354, 841, 1885
PspXI	VCTCGAGB	1 cut(s)	462
PstNI	CAGNNNCTG	1 cut(s)	1367
PsuI	RGATCY	4 cut(s)	650, 1120, 1370, 1947
RsaI	GTAC	5 cut(s)	154, 303, 869, 874, 2020
RsaNI	GTAC	5 cut(s)	153, 302, 868, 873, 2019
RseI	CAYNNNNRTG	5 cut(s)	325, 581, 852, 1553, 1971
SacI	GAGCTC	2 cut(s)	69, 99
SacII	CCGCGG	1 cut(s)	42
SapI	GCTCTTC	2 cut(s)	275, 1686
SaqAI	TTAA	9 cut(s)	308, 612, 744, 786, 1379, 1406, 1653, 1761, 1935
SatI	GCNGC	4 cut(s)	18, 42, 1354, 1880
Sau3AI	GATC	5 cut(s)	650, 1120, 1370, 1819, 1947
Sau96I	GGNCC	6 cut(s)	161, 162, 353, 354, 841, 1885
SchI	GAGTC	2 cut(s)	44, 1106
ScrFI	CCNGG	6 cut(s)	159, 160, 324, 1256, 1368, 1998
SduI	GDGCHC	8 cut(s)	9, 69, 99, 165, 346, 357, 1461, 1681
SfaNI	GCATC	6 cut(s)	15, 280, 1197, 1545, 1866, 2347
SfcI	CTRYAG	1 cut(s)	1468
Sfr274I	CTCGAG	2 cut(s)	462, 654
Sfr303I	CCGCGG	1 cut(s)	42
SfuI	TTCGAA	1 cut(s)	2127
SgrBI	CCGCGG	1 cut(s)	42
SinI	GGWCC	1 cut(s)	1885
SlaI	CTCGAG	2 cut(s)	462, 654
SmaI	CCCGGG	1 cut(s)	160
SmiMI	CAYNNNNRTG	5 cut(s)	325, 581, 852, 1553, 1971
SmlI	CTYRAG	8 cut(s)	462, 654, 743, 764, 785, 1454, 1685, 1786
SmoI	CTYRAG	8 cut(s)	462, 654, 743, 764, 785, 1454, 1685, 1786
Sse9I	AATT	9 cut(s)	188, 613, 664, 670, 980, 1040, 1402, 1632, 1849
SsiI	CCGC	8 cut(s)	39, 41, 44, 209, 939, 1353, 1880, 1907
SspMI	CTAG	6 cut(s)	618, 1197, 1586, 1904, 2016, 2279
SstI	GAGCTC	2 cut(s)	69, 99
StyD4I	CCNGG	6 cut(s)	157, 158, 322, 1254, 1366, 1996
StyI	CCWWGG	1 cut(s)	196
TaaI	ACNGT	6 cut(s)	306, 395, 872, 1472, 1514, 2306
TaiI	ACGT	6 cut(s)	145, 343, 1283, 1533, 1703, 1865
TaqI	TCGA	8 cut(s)	33, 463, 655, 1100, 1508, 2127, 2244, 2297
TasI	AATT	9 cut(s)	188, 613, 664, 670, 980, 1040, 1402, 1632, 1849
TatI	WGTACW	3 cut(s)	867, 872, 2018
TauI	GCSGC	3 cut(s)	44, 1356, 1882
Tru1I	TTAA	9 cut(s)	308, 612, 744, 786, 1379, 1406, 1653, 1761, 1935
Tru9I	TTAA	9 cut(s)	308, 612, 744, 786, 1379, 1406, 1653, 1761, 1935
TscAI	CASTG	8 cut(s)	154, 186, 254, 1272, 2008, 2037, 2311, 2340
TseFI	GTSAC	1 cut(s)	1418
TseI	GCWGC	1 cut(s)	17
Tsp45I	GTSAC	1 cut(s)	1418
TspGWI	ACGGA	2 cut(s)	593, 1736
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	8 cut(s)	154, 186, 254, 1272, 2008, 2037, 2311, 2340
Van91I	CCANNNNNTGG	1 cut(s)	1367
Vha464I	CTTAAG	2 cut(s)	743, 785
VpaK11BI	GGWCC	1 cut(s)	1885
XapI	RAATTY	4 cut(s)	188, 664, 1402, 1849
XbaI	TCTAGA	1 cut(s)	617
XceI	RCATGY	2 cut(s)	822, 1139
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1364, 1970
XhoI	CTCGAG	2 cut(s)	462, 654
XmaI	CCCGGG	1 cut(s)	158
XmiI	GTMKAC	2 cut(s)	2169, 2261
XmnI	GAANNNNTTC	2 cut(s)	188, 2139
XspI	CTAG	6 cut(s)	618, 1197, 1586, 1904, 2016, 2279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.