Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003440

Physical Location & Seq

Genomic Coordinates Forward (+)

14584690 .. 14589460

Gene Structure 4771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g15080.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3021 bp

ATGTCGAGGATCACTAGGTGGAAGCTTGAGAAGACAAAAGTAAAAGTGGTTTTCAGGTTACAGTTCCATGCCACACATGTTCCACAAACCGGATGGGATAAGCTGTTTATATCTTTCATACCTGCTGATTCCGGAAAAGCAACTGCAAAAACAACCAAGGCAAACGTGAGGAATGGGACCTGCAAATGGGGAGACCCCATCTATGAAACTACAAGGCTTCTACAAGACACCAAAACCAAACAATACGATGAGAAGCTTTACAAACTTGTGGTAACCATGGGTTCTTCAAGGTCTAGTATCCTTGGTGAGACTAATATCAACCTTGCTGATTATGCTGATGCATCAAAGCCTTCGTCCGTTGCTCTGCCTCTTCTTGGATGTGATTCTGGAACTGTTTTACATGTCACGGTACAGCTGCTAACTTCTAAAACTGGCTTCAGAGAGTTTGAGCAGCAGAGGGAGCTCAGAGAGAGCGGTCTACGAACAACCTCTGACCAAAACAGAAATGATGTATCCACTACTAGAAGAATATCATCTTCTGAAGATGCAGTAAATGAGCAGATGGATAAGATGAATTTGAAAGTTAGATTCAAAGAACTCTGTCCCCATGAAGAAGGGGCTGGTCTGAATGAAGAGTATGCTGATTCAACTGGTGGATTTGAATATTCTTCCACTACTTCAGAAAGTTTATATGCTGAGAAACATGACGCGTCTAGCACCCATGAGATTGACAGTATTAAGAGTACCACCTCTGCTGATCTAGGGGGATTGTCCCTTAGTCAAAGTCCCGGACAAGAGAAACAACATCCCTCGGATCAGCAATTCTTGGTACAGGGGACCAGTGAGTGGGCTCATAGCTGGGGCTCTGAATTTTCTCCAGATGCTTATTTACCAAATGCTTCTGAGGAAAATAGCAGGCTTAGCAGAAGCTTGGAAGCAGCTGAATCATCCATTCTTGACCTTAAGCAGGAGGTGAACTCTTTACAGGTTCATGCTGATGAAATCGGCAATGATGCAGAAAAATTTAGTCTTCAACTTGATGCTGAAATTGCTTCTGGAGAACAATTAGCAAAAGAAATTTCCACACTGAGATCCGAATGTTCAAAGTTAAAAGAAGATCTTGAGGAGCAAAAAAGTTTCAAACTAAGCATTCCATTCTCCCACAGGGAAACTATTGAGACAGGCCAAGATCGCATTTTTCATGAGTTACGGCTCAGGTGGTTTAAGGGCCTTTCAAGCATGGAGGATAAATTAAAAGGGCTTCAGAGCAAGGCATTATTTGGAGCAAATGAAAGGGACTTCCAGTCCTGTCACTCGGATTTCGAGGCATTGCTTGGTGTTTTGCAAGTTCTCAAACAAGAGACTGGACAGGCAAGTTCAGGGCTGAACGTGACAAGCGTAAAGGCTGATGAAATAAGTTTACATAAAGGTGAGCAATTAGTACTAGGAACGAGGGTGGATGCAGATTCCCATCAACCCGAGGGTGCCGTTCATTGTCTAAGTATACCTGGCCTGGTGTCACTAGACTTTGATTCTGTAGATGCTGCCAATGCAATGAAAGGGAAGTTTGTTGAAATTTTAAGAGAGTTGGATGAGATGAAAGCTGATCGAGAAAGCCTTGCAAAGAAAGCAGACCAGATGGAGTGCTACTATGAAGCTCTCATTCATGAACTTGAGGAAAACCAGAGACAGATGATTGGAGAATTGCAGAATCTCAGGAATGAGCATTCTACTTGCTTGTACACAATTTCATCTGCTAACGCTGAGATGGAGAGAATCCAGCAAGACATGAACAACGAGCGAAGAATATTTTCCAAAGAAAAGCGTGATTTGGACTCTCTGAACAAGGAGTTTGAAAGAAGGGCTACTACAGCAGAAGCAGCACTTAAAAGGGCACGCATGAATTACTCTATTGCAGTGAACCAGTTACAGAAGGACCTTGAATTGCTTTCATTCCAGGTTCAGTCCATGCATGAGACTAATGAGAACCTCATTAAGCAGGCTTTTGAAGATTCTTTGATTCCAATGTTTCAGGGTTGTGAAGAAACAGTGCAGAATAAGAAATCGGATTCAGAGGAATTTCCATCTGCAAAACACTTACAGTGTCAGAATCAATGCTACGGGATAAAGAAACAGCAGTTAGATGGGAATGCATTATCAGATGATTTGAGAAGATCCCTCCACTTGCAGAAGGGTATCTACCAAAAGATTGAAGAAGAACTTTATGAGGTGCATCTGGTGAATGTGTATTTGGATGTATTGTCAAAGACTCTACAAGTTACTTTGATTGAAGCAAGTGCTGCCTTCGGATTGACGAAAGAGAAAGTGCATGAACTTTCACAACAGCTGGAGCTTTCAACTGAGTCCAATGAGTTGTTGATGCTGAGGCTGCAGACTGCATTGGATGAGATTCGCCGCCTGAAGGAGTACAAGGAAACTTGTAATTCAATCCGCAATGACTTGGTTCTGAAGAACCAAATTTTGGAAGCAGATTTACAAAACGCTATTAGTGAAAATGGCCTTCTTACCCAGAAGATTGTTGAATGGAAAGGTATGATAAAAGAATATGAAACTTATGAGAGCAAATACAAGGCCTGCACTACTGAAAAATTACAGCTGGAAAATTTGTTGCAAAAGGAAACCCTAGAAAACGGCATTCTTCAGAATAAACTTTCCTCTTTGCAGGAAGAGTTGAAATCTGTCAGAACCGACTTTGATGAGCTAGCTTGCACGAAGGAGGATCTGCAGAATATTGTGAATTTTCTACAGGGTAAGTTATGGAATCTGTTGGCATCATATGACCAAAAGTATAAAAGCCTGGCTCTTTGCGGCGGATGTGTCTGTCAAGGCTTGGAATCCAGAGATTTAACAGGTGTAGTGATGCAAATAGAAGAGCTTCAGAACAATGTATATGGAAAGTTTCTCCAAATGATGGAAGAGAAGAAAGAGCTAGCACAAGAAAGAGATATTGCTCAAGAGTCTTTACGTGCAGCAGAGTCTGATAATCTGATCGATCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NT-C2

Protein Analysis

1007

Amino Acids

113.93

Weight (kDa)

5.1

Isoelectric Point (pI)

50.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003440)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22060 AT1G22060
fragaria_vesca	FvH4_5g38230 FvH4_5g38230 FvH4_5g38230 FvH4_5g38230 FvH4_5g38230 FvH4_5g38230 FvH4_5g38230 FvH4_5g38230 FvH4_5g38230
malus_domestica	MD08G1176200.v1.1 MD15G1361900.v1.1
prunus_persica	Prupe.1G510000_v2.0.a1 Prupe.1G510000_v2.0.a1 Prupe.1G510000_v2.0.a1 Prupe.1G510000_v2.0.a1 Prupe.1G510000_v2.0.a1
pyrus_communis	pycom08g15080 pycom08g15090 pycom08g15100 pycom08g15110 pycom08g15120 pycom15g32460
rosa_chinensis	RchiOBHm_Chr7g0240181
rosa_laevigata	RLG00000000692
rosa_multiflora	Rmu_sc0005008.1_g000001
rosa_roxburghii	Rroxscaffold_3G00220340
rosa_rugosa	Rorug07G0334100 Rorug07G0334100 Rorug07G0334200
rosa_samantha	Rh7AG487700 Rh7BG461000 Rh7CG504300 Rh7DG472500
rosa_wichuraiana	Rw7G040860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	130, 188
AccB1I	GGYRCC	1 cut(s)	1484
AccB7I	CCANNNNNTGG	3 cut(s)	846, 2482, 2932
AccBSI	CCGCTC	1 cut(s)	474
AccI	GTMKAC	2 cut(s)	478, 1504
AccII	CGCG	1 cut(s)	710
AccIII	TCCGGA	1 cut(s)	131
AciI	CCGC	5 cut(s)	474, 2416, 2452, 2829, 2832
AclWI	GGATC	5 cut(s)	17, 822, 1086, 2169, 2748
AcsI	RAATTY	9 cut(s)	574, 869, 1022, 1077, 1575, 2078, 2478, 2623, 2758
AcuI	CTGAAG	8 cut(s)	421, 561, 663, 1247, 2441, 2489, 2645, 2882
AdeI	CACNNNGTG	1 cut(s)	18
AfaI	GTAC	6 cut(s)	411, 745, 831, 1443, 1742, 2429
AfiI	CCNNNNNNNGG	8 cut(s)	89, 186, 374, 846, 967, 2422, 2482, 2932
AflII	CTTAAG	1 cut(s)	962
AflIII	ACRYGT	3 cut(s)	76, 400, 708
AhdI	GACNNNNNGTC	1 cut(s)	1303
AjnI	CCWGG	4 cut(s)	1507, 1512, 1956, 2817
AjuI	GAANNNNNNNTTGG	4 cut(s)	2234, 2266, 2465, 2497
Alw21I	GWGCWC	1 cut(s)	465
Alw26I	GTCTC	6 cut(s)	186, 302, 1172, 1355, 1681, 1970
AlwI	GGATC	5 cut(s)	17, 822, 1086, 2169, 2748
AlwNI	CAGNNNCTG	1 cut(s)	2999
Ama87I	CYCGRG	1 cut(s)	1478
Aor13HI	TCCGGA	1 cut(s)	131
AoxI	GGCC	5 cut(s)	1183, 1228, 1510, 2518, 2592
ApeKI	GCWGC	8 cut(s)	415, 451, 938, 1544, 1880, 2300, 2389, 2990
ApoI	RAATTY	9 cut(s)	574, 869, 1022, 1077, 1575, 2078, 2478, 2623, 2758
ArsI	GACNNNNNNTTYG	2 cut(s)	338, 370
Asp700I	GAANNNNTTC	2 cut(s)	1810, 2895
AspS9I	GGNCC	4 cut(s)	177, 837, 1228, 1936
AsuC2I	CCSGG	1 cut(s)	789
AsuHPI	GGTGA	4 cut(s)	317, 985, 1442, 2251
AsuNHI	GCTAGC	2 cut(s)	2722, 2950
AvaI	CYCGRG	1 cut(s)	1478
AvaII	GGWCC	3 cut(s)	177, 837, 1936
BaeGI	GKGCMC	1 cut(s)	1897
BanI	GGYRCC	1 cut(s)	1484
BanII	GRGCYC	3 cut(s)	465, 853, 866
BarI	GAAGNNNNNNTAC	6 cut(s)	1852, 1884, 2183, 2215, 2478, 2510
BbsI	GAAGAC	2 cut(s)	38, 1022
Bbv12I	GWGCWC	1 cut(s)	465
BbvCI	CCTCAGC	1 cut(s)	2384
BbvI	GCAGC	8 cut(s)	402, 463, 950, 1531, 1892, 2287, 2376, 3002
BccI	CCATC	9 cut(s)	87, 206, 556, 1479, 1633, 1762, 2092, 2138, 2926
BceAI	ACGGC	3 cut(s)	1226, 1472, 2668
BciT130I	CCWGG	4 cut(s)	1509, 1514, 1958, 2819
BciVI	GTATCC	2 cut(s)	308, 523
BcnI	CCSGG	1 cut(s)	789
BcoDI	GTCTC	6 cut(s)	186, 302, 1172, 1355, 1681, 1970
BfmI	CTRYAG	5 cut(s)	1536, 1869, 2390, 2744, 2765
BfrI	CTTAAG	1 cut(s)	962
BfuAI	ACCTGC	2 cut(s)	130, 188
BfuI	GTATCC	2 cut(s)	308, 523
BglII	AGATCT	1 cut(s)	1117
BlpI	GCTNAGC	1 cut(s)	920
BmcAI	AGTACT	1 cut(s)	1443
Bme1390I	CCNGG	5 cut(s)	789, 1509, 1514, 1958, 2819
Bme18I	GGWCC	3 cut(s)	177, 837, 1936
BmeRI	GACNNNNNGTC	1 cut(s)	1303
BmeT110I	CYCGRG	1 cut(s)	1478
BmgT120I	GGNCC	4 cut(s)	177, 837, 1228, 1936
BmiI	GGNNCC	3 cut(s)	178, 838, 1486
BmrFI	CCNGG	5 cut(s)	789, 1509, 1514, 1958, 2819
BmtI	GCTAGC	2 cut(s)	2726, 2954
BpiI	GAAGAC	2 cut(s)	38, 1022
BplI	GAGNNNNNCTC	2 cut(s)	962, 994
BpmI	CTGGAG	3 cut(s)	861, 1077, 2369
Bpu10I	CCTNAGC	2 cut(s)	1214, 2384
Bpu1102I	GCTNAGC	1 cut(s)	920
BpuEI	CTTGAG	4 cut(s)	47, 1142, 1694, 2958
BpuMI	CCSGG	1 cut(s)	789
Bsa29I	ATCGAT	2 cut(s)	3012, 3016
BsaAI	YACGTR	1 cut(s)	2987
BsaBI	GATNNNNATC	1 cut(s)	1470
BsaI	GGTCTC	1 cut(s)	186
BsaJI	CCNNGG	5 cut(s)	156, 276, 301, 810, 1479
BsaWI	WCCGGW	2 cut(s)	89, 131
Bsc4I	CCNNNNNNNGG	8 cut(s)	89, 186, 374, 846, 967, 2422, 2482, 2932
Bse1I	ACTGG	6 cut(s)	436, 655, 840, 1303, 1369, 1924
Bse3DI	GCAATG	4 cut(s)	1015, 1328, 1560, 2461
Bse8I	GATNNNNATC	1 cut(s)	1470
BseAI	TCCGGA	1 cut(s)	131
BseBI	CCWGG	4 cut(s)	1509, 1514, 1958, 2819
BseCI	ATCGAT	2 cut(s)	3012, 3016
BseDI	CCNNGG	5 cut(s)	156, 276, 301, 810, 1479
BseGI	GGATG	9 cut(s)	98, 383, 805, 947, 1465, 1597, 2260, 2410, 2840
BseJI	GATNNNNATC	1 cut(s)	1470
BseLI	CCNNNNNNNGG	8 cut(s)	89, 186, 374, 846, 967, 2422, 2482, 2932
BseMI	GCAATG	4 cut(s)	1015, 1328, 1560, 2461
BseMII	CTCAG	9 cut(s)	478, 687, 894, 1079, 1228, 1729, 1755, 2352, 2375
BseNI	ACTGG	6 cut(s)	436, 655, 840, 1303, 1369, 1924
BseRI	GAGGAG	1 cut(s)	1139
BseSI	GKGCMC	1 cut(s)	1897
BseXI	GCAGC	8 cut(s)	402, 463, 950, 1531, 1892, 2287, 2376, 3002
BseYI	CCCAGC	1 cut(s)	858
BsgI	GTGCAG	3 cut(s)	2072, 2581, 3009
Bsh1236I	CGCG	1 cut(s)	710
Bsh1285I	CGRYCG	1 cut(s)	3016
BshFI	GGCC	5 cut(s)	1185, 1230, 1512, 2520, 2594
BshNI	GGYRCC	1 cut(s)	1484
BshVI	ATCGAT	2 cut(s)	3012, 3016
BsiEI	CGRYCG	1 cut(s)	3016
BsiHKAI	GWGCWC	1 cut(s)	465
BsiHKCI	CYCGRG	1 cut(s)	1478
BsiSI	CCGG	3 cut(s)	90, 132, 789
BslFI	GGGAC	6 cut(s)	190, 588, 757, 771, 850, 1310
BslI	CCNNNNNNNGG	8 cut(s)	89, 186, 374, 846, 967, 2422, 2482, 2932
BsmAI	GTCTC	6 cut(s)	186, 302, 1172, 1355, 1681, 1970
BsmFI	GGGAC	6 cut(s)	190, 588, 757, 771, 850, 1310
BsmI	GAATGC	4 cut(s)	1149, 1726, 2155, 2655
BsnI	GGCC	5 cut(s)	1185, 1230, 1512, 2520, 2594
Bso31I	GGTCTC	1 cut(s)	186
BsoBI	CYCGRG	1 cut(s)	1478
Bsp1286I	GDGCHC	4 cut(s)	465, 853, 866, 1897
Bsp13I	TCCGGA	1 cut(s)	131
Bsp1407I	TGTACA	1 cut(s)	1740
Bsp1720I	GCTNAGC	1 cut(s)	920
Bsp19I	CCATGG	1 cut(s)	276
BspACI	CCGC	5 cut(s)	474, 2416, 2452, 2829, 2832
BspANI	GGCC	5 cut(s)	1185, 1230, 1512, 2520, 2594
BspCNI	CTCAG	9 cut(s)	477, 688, 895, 1080, 1227, 1728, 1756, 2353, 2376
BspDI	ATCGAT	2 cut(s)	3012, 3016
BspEI	TCCGGA	1 cut(s)	131
BspFNI	CGCG	1 cut(s)	710
BspHI	TCATGA	2 cut(s)	1201, 1666
BspLI	GGNNCC	3 cut(s)	178, 838, 1486
BspMAI	CTGCAG	2 cut(s)	2394, 2748
BspMI	ACCTGC	2 cut(s)	130, 188
BspOI	GCTAGC	2 cut(s)	2726, 2954
BspPI	GGATC	5 cut(s)	17, 822, 1086, 2169, 2748
BspQI	GCTCTTC	1 cut(s)	2886
BspT107I	GGYRCC	1 cut(s)	1484
BspTI	CTTAAG	1 cut(s)	962
BspTNI	GGTCTC	1 cut(s)	186
BsrBI	CCGCTC	1 cut(s)	474
BsrDI	GCAATG	4 cut(s)	1015, 1328, 1560, 2461
BsrGI	TGTACA	1 cut(s)	1740
BsrI	ACTGG	6 cut(s)	436, 655, 840, 1303, 1369, 1924
BssECI	CCNNGG	5 cut(s)	156, 276, 301, 810, 1479
BssNAI	GTATAC	1 cut(s)	1505
BssT1I	CCWWGG	3 cut(s)	156, 276, 301
Bst1107I	GTATAC	1 cut(s)	1505
Bst2UI	CCWGG	4 cut(s)	1509, 1514, 1958, 2819
Bst4CI	ACNGT	6 cut(s)	63, 394, 409, 734, 2050, 2103
Bst6I	CTCTTC	5 cut(s)	375, 627, 2682, 2886, 2931
BstAFI	CTTAAG	1 cut(s)	962
BstAPI	GCANNNNNTGC	1 cut(s)	2300
BstAUI	TGTACA	1 cut(s)	1740
BstBAI	YACGTR	1 cut(s)	2987
BstC8I	GCNNGC	7 cut(s)	917, 1897, 2001, 2596, 2724, 2728, 2952
BstDSI	CCRYGG	1 cut(s)	276
BstEII	GGTNACC	1 cut(s)	271
BstENI	CCTNNNNNAGG	1 cut(s)	965
BstF5I	GGATG	9 cut(s)	98, 383, 805, 947, 1465, 1597, 2260, 2410, 2840
BstFNI	CGCG	1 cut(s)	710
BstMAI	GTCTC	6 cut(s)	186, 302, 1172, 1355, 1681, 1970
BstMCI	CGRYCG	1 cut(s)	3016
BstNI	CCWGG	4 cut(s)	1509, 1514, 1958, 2819
BstNSI	RCATGY	2 cut(s)	80, 404
BstPI	GGTNACC	1 cut(s)	271
BstSCI	CCNGG	5 cut(s)	787, 1507, 1512, 1956, 2817
BstSFI	CTRYAG	5 cut(s)	1536, 1869, 2390, 2744, 2765
BstSLI	GKGCMC	1 cut(s)	1897
BstUI	CGCG	1 cut(s)	710
BstV1I	GCAGC	8 cut(s)	402, 463, 950, 1531, 1892, 2287, 2376, 3002
BstV2I	GAAGAC	2 cut(s)	38, 1022
BstX2I	RGATCY	4 cut(s)	1091, 1117, 2174, 2740
BstYI	RGATCY	4 cut(s)	1091, 1117, 2174, 2740
BstZ17I	GTATAC	1 cut(s)	1505
Bsu15I	ATCGAT	2 cut(s)	3012, 3016
BsuI	GTATCC	2 cut(s)	308, 523
BsuRI	GGCC	5 cut(s)	1185, 1230, 1512, 2520, 2594
BsuTUI	ATCGAT	2 cut(s)	3012, 3016
BtgI	CCRYGG	1 cut(s)	276
BtsCI	GGATG	9 cut(s)	98, 383, 805, 947, 1465, 1597, 2260, 2410, 2840
BtsI	GCAGTG	1 cut(s)	1923
BtsIMutI	CAGTG	5 cut(s)	847, 1085, 1923, 2055, 2108
BveI	ACCTGC	2 cut(s)	130, 188
Cac8I	GCNNGC	7 cut(s)	917, 1897, 2001, 2596, 2724, 2728, 2952
CaiI	CAGNNNCTG	1 cut(s)	2999
CciI	TCATGA	2 cut(s)	1201, 1666
Cfr13I	GGNCC	4 cut(s)	177, 837, 1228, 1936
ClaI	ATCGAT	2 cut(s)	3012, 3016
CseI	GACGC	2 cut(s)	699, 716
Csp6I	GTAC	6 cut(s)	410, 744, 830, 1442, 1741, 2428
CviQI	GTAC	6 cut(s)	410, 744, 830, 1442, 1741, 2428
DraIII	CACNNNGTG	1 cut(s)	18
DriI	GACNNNNNGTC	1 cut(s)	1303
Eam1104I	CTCTTC	5 cut(s)	375, 627, 2682, 2886, 2931
Eam1105I	GACNNNNNGTC	1 cut(s)	1303
EarI	CTCTTC	5 cut(s)	375, 627, 2682, 2886, 2931
EciI	GGCGGA	1 cut(s)	2847
Ecl136II	GAGCTC	1 cut(s)	463
Eco130I	CCWWGG	3 cut(s)	156, 276, 301
Eco147I	AGGCCT	1 cut(s)	2594
Eco24I	GRGCYC	3 cut(s)	465, 853, 866
Eco31I	GGTCTC	1 cut(s)	186
Eco47I	GGWCC	3 cut(s)	177, 837, 1936
Eco53kI	GAGCTC	1 cut(s)	463
Eco57I	CTGAAG	8 cut(s)	421, 561, 663, 1247, 2441, 2489, 2645, 2882
Eco88I	CYCGRG	1 cut(s)	1478
Eco91I	GGTNACC	1 cut(s)	271
EcoICRI	GAGCTC	1 cut(s)	463
EcoNI	CCTNNNNNAGG	1 cut(s)	965
EcoO109I	RGGNCCY	3 cut(s)	177, 1228, 1936
EcoO65I	GGTNACC	1 cut(s)	271
EcoRII	CCWGG	4 cut(s)	1507, 1512, 1956, 2817
EcoT14I	CCWWGG	3 cut(s)	156, 276, 301
EcoT22I	ATGCAT	3 cut(s)	343, 1974, 2155
EcoT38I	GRGCYC	3 cut(s)	465, 853, 866
ErhI	CCWWGG	3 cut(s)	156, 276, 301
FalI	AAGNNNNNCTT	6 cut(s)	1104, 1136, 1869, 1901, 2205, 2237
FaqI	GGGAC	6 cut(s)	190, 588, 757, 771, 850, 1310
FauNDI	CATATG	1 cut(s)	2797
FblI	GTMKAC	2 cut(s)	478, 1504
FokI	GGATG	9 cut(s)	105, 390, 792, 934, 1472, 1604, 2267, 2417, 2847
FriOI	GRGCYC	3 cut(s)	465, 853, 866
GsaI	CCCAGC	1 cut(s)	862
GsuI	CTGGAG	3 cut(s)	861, 1077, 2369
HaeIII	GGCC	5 cut(s)	1185, 1230, 1512, 2520, 2594
HapII	CCGG	3 cut(s)	90, 132, 789
HgaI	GACGC	2 cut(s)	699, 716
HindIII	AAGCTT	3 cut(s)	23, 254, 928
HpaII	CCGG	3 cut(s)	90, 132, 789
HphI	GGTGA	4 cut(s)	317, 985, 1442, 2251
Hpy166II	GTNNAC	6 cut(s)	479, 976, 1421, 1505, 1743, 1921
Hpy8I	GTNNAC	6 cut(s)	479, 976, 1421, 1505, 1743, 1921
HpyAV	CCTTC	9 cut(s)	360, 608, 1854, 1927, 2185, 2314, 2416, 2531, 2728
HpyCH4III	ACNGT	6 cut(s)	63, 394, 409, 734, 2050, 2103
HpyCH4IV	ACGT	3 cut(s)	165, 1389, 2986
HpySE526I	ACGT	3 cut(s)	165, 1389, 2986
Kpn2I	TCCGGA	1 cut(s)	131
LguI	GCTCTTC	1 cut(s)	2886
LmnI	GCTCC	4 cut(s)	460, 1126, 1283, 2350
Lsp1109I	GCAGC	8 cut(s)	402, 463, 950, 1531, 1892, 2287, 2376, 3002
MaeII	ACGT	3 cut(s)	165, 1389, 2986
MaeIII	GTNAC	9 cut(s)	57, 271, 403, 1206, 1310, 1390, 1518, 1926, 2278
MbiI	CCGCTC	1 cut(s)	474
MflI	RGATCY	4 cut(s)	1091, 1117, 2174, 2740
MhlI	GDGCHC	4 cut(s)	465, 853, 866, 1897
MluI	ACGCGT	1 cut(s)	708
MlyI	GAGTC	5 cut(s)	1829, 2263, 2372, 2987, 3005
MmeI	TCCRAC	1 cut(s)	1569
Mph1103I	ATGCAT	3 cut(s)	343, 1974, 2155
MroI	TCCGGA	1 cut(s)	131
MroXI	GAANNNNTTC	2 cut(s)	1810, 2895
MseI	TTAA	9 cut(s)	738, 963, 1109, 1224, 1253, 1580, 1887, 1995, 2867
MslI	CAYNNNNRTG	2 cut(s)	996, 1428
MspA1I	CMGCKG	4 cut(s)	415, 941, 2347, 2617
MspCI	CTTAAG	1 cut(s)	962
MspI	CCGG	3 cut(s)	90, 132, 789
MspR9I	CCNGG	5 cut(s)	789, 1509, 1514, 1958, 2819
Mva1269I	GAATGC	4 cut(s)	1149, 1726, 2155, 2655
MvaI	CCWGG	4 cut(s)	1509, 1514, 1958, 2819
MvnI	CGCG	1 cut(s)	710
NciI	CCSGG	1 cut(s)	789
NcoI	CCATGG	1 cut(s)	276
NdeI	CATATG	1 cut(s)	2797
NheI	GCTAGC	2 cut(s)	2722, 2950
NlaIV	GGNNCC	3 cut(s)	178, 838, 1486
NmuCI	GTSAC	4 cut(s)	403, 1310, 1390, 1518
NsiI	ATGCAT	3 cut(s)	343, 1974, 2155
NspI	RCATGY	2 cut(s)	80, 404
PagI	TCATGA	2 cut(s)	1201, 1666
PceI	AGGCCT	1 cut(s)	2594
PciI	ACATGT	2 cut(s)	76, 400
PciSI	GCTCTTC	1 cut(s)	2886
PcsI	WCGNNNNNNNCGW	1 cut(s)	1395
PctI	GAATGC	4 cut(s)	1149, 1726, 2155, 2655
PdmI	GAANNNNTTC	2 cut(s)	1810, 2895
PflMI	CCANNNNNTGG	3 cut(s)	846, 2482, 2932
PfoI	TCCNGGA	1 cut(s)	787
Ple19I	CGATCG	1 cut(s)	3016
PleI	GAGTC	5 cut(s)	1829, 2263, 2371, 2986, 3004
PpsI	GAGTC	5 cut(s)	1829, 2263, 2371, 2986, 3004
Ppu21I	YACGTR	1 cut(s)	2987
PpuMI	RGGWCCY	2 cut(s)	177, 1936
PscI	ACATGT	2 cut(s)	76, 400
Psp124BI	GAGCTC	1 cut(s)	465
Psp5II	RGGWCCY	2 cut(s)	177, 1936
Psp6I	CCWGG	4 cut(s)	1507, 1512, 1956, 2817
PspEI	GGTNACC	1 cut(s)	271
PspFI	CCCAGC	1 cut(s)	858
PspGI	CCWGG	4 cut(s)	1507, 1512, 1956, 2817
PspN4I	GGNNCC	3 cut(s)	178, 838, 1486
PspPI	GGNCC	4 cut(s)	177, 837, 1228, 1936
PspPPI	RGGWCCY	2 cut(s)	177, 1936
PstI	CTGCAG	2 cut(s)	2394, 2748
PstNI	CAGNNNCTG	1 cut(s)	2999
PsuI	RGATCY	4 cut(s)	1091, 1117, 2174, 2740
PvuI	CGATCG	1 cut(s)	3016
PvuII	CAGCTG	4 cut(s)	415, 941, 2347, 2617
RsaI	GTAC	6 cut(s)	411, 745, 831, 1443, 1742, 2429
RsaNI	GTAC	6 cut(s)	410, 744, 830, 1442, 1741, 2428
RseI	CAYNNNNRTG	2 cut(s)	996, 1428
SacI	GAGCTC	1 cut(s)	465
SapI	GCTCTTC	1 cut(s)	2886
SaqAI	TTAA	9 cut(s)	738, 963, 1109, 1224, 1253, 1580, 1887, 1995, 2867
Sau96I	GGNCC	4 cut(s)	177, 837, 1228, 1936
ScaI	AGTACT	1 cut(s)	1443
SchI	GAGTC	5 cut(s)	1829, 2263, 2372, 2987, 3005
ScrFI	CCNGG	5 cut(s)	789, 1509, 1514, 1958, 2819
SduI	GDGCHC	4 cut(s)	465, 853, 866, 1897
SfcI	CTRYAG	5 cut(s)	1536, 1869, 2390, 2744, 2765
SinI	GGWCC	3 cut(s)	177, 837, 1936
SmiMI	CAYNNNNRTG	2 cut(s)	996, 1428
SmlI	CTYRAG	5 cut(s)	26, 962, 1121, 1673, 2973
SmoI	CTYRAG	5 cut(s)	26, 962, 1121, 1673, 2973
SseBI	AGGCCT	1 cut(s)	2594
SsiI	CCGC	5 cut(s)	474, 2416, 2452, 2829, 2832
SspI	AATATT	3 cut(s)	665, 1809, 2752
SstI	GAGCTC	1 cut(s)	465
StuI	AGGCCT	1 cut(s)	2594
StyD4I	CCNGG	5 cut(s)	787, 1507, 1512, 1956, 2817
StyI	CCWWGG	3 cut(s)	156, 276, 301
TaaI	ACNGT	6 cut(s)	63, 394, 409, 734, 2050, 2103
TaiI	ACGT	3 cut(s)	168, 1392, 2989
TaqI	TCGA	5 cut(s)	5, 1323, 1609, 3012, 3016
TatI	WGTACW	3 cut(s)	1441, 1740, 2427
TauI	GCSGC	2 cut(s)	2418, 2832
Tru1I	TTAA	9 cut(s)	738, 963, 1109, 1224, 1253, 1580, 1887, 1995, 2867
Tru9I	TTAA	9 cut(s)	738, 963, 1109, 1224, 1253, 1580, 1887, 1995, 2867
TscAI	CASTG	5 cut(s)	847, 1092, 1923, 2055, 2108
TseFI	GTSAC	4 cut(s)	403, 1310, 1390, 1518
TseI	GCWGC	8 cut(s)	415, 451, 938, 1544, 1880, 2300, 2389, 2990
Tsp45I	GTSAC	4 cut(s)	403, 1310, 1390, 1518
TspGWI	ACGGA	1 cut(s)	346
TspRI	CASTG	5 cut(s)	847, 1092, 1923, 2055, 2108
Van91I	CCANNNNNTGG	3 cut(s)	846, 2482, 2932
Vha464I	CTTAAG	1 cut(s)	962
VpaK11BI	GGWCC	3 cut(s)	177, 837, 1936
XagI	CCTNNNNNAGG	1 cut(s)	965
XapI	RAATTY	9 cut(s)	574, 869, 1022, 1077, 1575, 2078, 2478, 2623, 2758
XceI	RCATGY	2 cut(s)	80, 404
XcmI	CCANNNNNNNNNTGG	1 cut(s)	90
XmiI	GTMKAC	2 cut(s)	478, 1504
XmnI	GAANNNNTTC	2 cut(s)	1810, 2895
ZrmI	AGTACT	1 cut(s)	1443
Zsp2I	ATGCAT	3 cut(s)	343, 1974, 2155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.