pycom08g17390

BEACH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0002031
Physical Location & Seq
Forward (+)
17591558 .. 17601670
10113 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4629 bp
ATGCTTAATTTTCTTCTTGATTGGTTTTCACAAGAAGACAATGACAGTGTCATCTTGAAAATTGCCCAACTAATTCAGGTCGTTGGTGGACATAGCACATCTGGAAAGGACATTCGCAAAATCTTTGCCCTTCTCCGAAGTGAGAAAATTGGGAATCAGCAGAAGTATTGCTCACTATTGTTGTCCAGTGTTTTGTCAATGCTAAATGTAAAGGGTCCTACTGCCTTCTTTGACTTCACTGGGAATGATTCTGGGATCATAATAAAAACGCCTGTGCAGTGGCCTCTGAATAAGGGATTTTCTTTTTCATGTTGGCTTCGCGTAGAGAATTTCCCCAGAAGTGGAAAAATGGGTCTTTTCAATTTTCTTGCAGAAAATGGAAGAGGTTGTATGGCTGCACTTGCAAAGGAAAAGTTTCTATATGAGTCAATGAATCTGAAGCGACAATCAGTCCAGTTACAGGTTAATATTGTTAGAAAGAAATGGCATTTTCTATGTATAACTCATAGCATTGGAAGAGCATTTTCTGGGGGTAGCTTATTGAGGTGCTATGTGGATGGTGATCTCGTTTCTTCTGAAAGATGCAGATATGCCAAAGTTAATGAATTATTAACAAGTTGTAGAATTGGCGCAAAATTTGATATTCCTCTGTATGAAGATGGTTTGGCTTTGGAATCTGTAAAAGATTCGCATCCTTTCCTCGGTCAGATTGGTCCTGTTTATTTATTTAATGATGCCATTTCGTCTGAGCAAGTTCAGGGCATCTATTCTCTTGGGCCGAGCTACATGTATTCGTTCCTTGACAATGAAGCTGCCTCATCTAAGGATAACCTGGTGCTTAGTGGGATCCTTGATGCGAAAGATGGTCTTTCATCAAAAATTATTTTTGGACTTAATGCACAGGCATGTGATGGCAGGAAACTCTTTAATGTTTCACCAATGCTGGACCATGTATCAGATAAGAACTCATTTGAAGCAACTGTAATGGTTGGCACGCAGCAATGCTCCAGACGTTTATTGCAACAGATAATTTACTGTGTTGGAGGTGTATCAGTGTTTTTTCCTCTTATCGCGCAGTCTGAAAAATATGAAAGTGAAGAAAGTGGGCAATTTGAGCATACATTGCCTGTTATCACGAGAGAGCGAGTGACTGCTGAAGTTATTGAGCTCATAGCTTCTGTTCTAGATGAGAACTTAGCTAATCAACAACAGATGCATCTTCTGTCTGGATTCTCAATACTAGGGTTCTTGTTGCAATCAGTTCCTCCTCAGCAGCTTAATTTGGAAACACTTTCAGCTTTAAAACATCTATTTAATGTCGTCGCAAACTGCGGCTTATCGGAGCTGCTTACTAAAGAGGCTATATCTAGCATATTTCTTAACCCTCTCATCTGGTTGTATACGGTATATAAGGTGCAGCTTGAATTATACATGTTTCTCATCCAGCAGTTTGATAATGATCCAAGGTTACTTAAAAGCCTTTGCCAGCTCCCTCGTGTTATTGATATAATACGCCAATTTTATTGGGACAATCCAAAAACTCGATTTTCTATTGGAAGCACACCTCTCCTTCATCCCATCACAAAACAAGTTCTTGGAGAGAGACCCAGTAATGAAGAAATACGAAAAATTCGTCTTGTTTTGTTGAGCCTTGGTGAAATGAGCCTCAGGCAGAAAATTGCAGCAGCAGATATCAGAGCTTTAATAGCTTTTTTCGAAACAAGTCAGGATTCAACCTGTATCGAGGATGTTTTACATATGCTTGTTCGAGCACTTACTCAAAAACCACTGCTTGCAGCTTTCCTGGAGCACGTCAACCTGATTGGTGGTTGTCATATGTTTGTTAATCTTCTTCAGAGGGAATATGAACCTATTAGATTGCTCAGCTTGCAGCTCCTTGGGAGACTTTTGGTTGATCATCCGTCTGAGAAGAAGGGAGCAAGATTTTTTAATCTTGCAGTTGGCAGATCTCGGTCTCCTTCAGATGGCCCAAAAAAAATTTGTCTGAAGATGCAACCAATTTTTTCAGCCATGTCTGATAGGTTATTCAGATTTCCACAAACAGATAACTTGTGTGCTTCATTGTTTGATGCTCTTCTTGGTGGTGCTAGCCCCAAACAGGTGTTACAGAAACACAACCAGGTTGAAAGGCAAAGAAGCAAAGCAAATAGCTCTCATTTTCTCCTTCCGCAAATTTTGGTTCTTATTTTTAGATTCCTGTCTGGCTGTGAGGATGCAGGTTCAAGAATGAAAATTGTCAGAGACTTACTTGATCTTCTTGATTCTGATCCTTCAAATGTTGAAGCTTTTATGGAATTTGGCTGGAATGCCTGGTTAACAGCTTGTGTGAAGCTTGGTGTATTCAAAAACTACAAAGTTAATCCCCAAGACCAAGATGATAATGAGAGAAATGAGCAAGATTTGGTGAGGAATCTGTTTGGTGTTGTTCTTTGTTACTATGTTCATTCTGTCAAAGGTGGGTGGCAACAGTTAGAAGAGACAGTGACTTTCCTACTAATGCAGTGTGAACATGGGGGCATTTCATTTAGATACTTGCTTCGAGATATTTATAAGGATTTGATCAGTAAACTTGTGGAATTGTCTTCTGAAGAGAATATCTTTATCTTGCAACCATGCCGGGACAACACGTTATACCTTCTAAGACTGGTCGATGAGATGCTTATCTCTGAAATAGACCAAAAACTTCCGTTTCCGGCAAGTAGCTCTGACTTTTCCCTGGATTCACTGGAGCTAGAACGCCATAAAGATTATGGCTCTGCTTTGTATGAAGTGCTGGAAGGAGAAATTGATAGCCAAACATCCAGGATCCCTGGGAGTTACAAGCAGCCAATTGATAATGCGGATGACATAGTAAATGACAAGTGGTGGAATCTGTATGACAATTTGTGGATTATTATAAGTGACATGAATGGTAAGGGACCAAGCAAGATGTCACCCAAACCATCACCATCTGCAGGTCCATCTTTTGGCCAAAGAGCACGTGGCTTAGTAGAATCTCTGAATATTCCTGCTGCAGAGGTGGCTGCAGTTGTTGTATCAGGAGGGATAGGCAGTGCGCTAGGTGGCAAACCTAACAAAGTTGTTGATAAGGCAATGCTCTTGCGAGGGGAGAGGTGCCCAAGAATCATTTTTCGACTTGTCATCCTATATCTATGCAGATCTTCTCTGGAAAGAGCATCACGTTGCGTCCAACAAGTCATTTCGCTTTTGCCATGTCTCTTGGCAGCTGATGATGAGCAAAGCAAAAGCAGATTGCAGCTGTTCATTTGGGCTTTGCTTGTTGTTAGGTCGCAGTTTGGAATGTTGGATGATGGTGCTCGTTTTCATGTGATATCACACTTGATTCGAGAAACTGTCAACTTTGGCAAATCAATGCTGGCTACTAGCATGATGGGGAGAGATGACCCCTTGGACTCGGCAAATAGTGTAAAAGAAACAGGATCAATTCAAAATTTAATTCAGAGGGATCGAGTGCTAGCAGCAGTAGCTGATGAGGCAAAATATGCAAAGTCATTAGATACAGATCGTCAAAGGCAGTTACGTGAGCTCCATTCTAGGTTAGATGAAAATTCCTCTGCAGAATCTAATACTAGGAAAGCTTTTGAAGATGAGATACAGAGTAGCTTGGTCTCCATTCTTGCTTTAGATGACAGCAGAAGAGCTGCATTCCAGCTCACTCATGAGGAGGAGCAACAAAATGTTGCTGAAAAATGGATACACATGTTTCGTGCTTTGATTGATGAGAGAGGTCCATGGTCTGCTAATCCTTTTCCAAATAGTGCTGTGAGGCATTGGAAACTTGACAAGATAGAGGATGCCTGGCGACGTAGGCAAAAGTTGAGACAGAATTATCATTTTGATGAAAAGCTGTGTCATCCTTCATCATCTATGCCCACTAATGAGGTTGCACCTCCTGTTAATGAAAGTAAATCTGGTTTCGTGGGGCACATTCCTGAGCAAATGAAGCGCTTTTTGCTGAAAGGGGTATGGAAGATAATTGATGATGGGAGCTTAGAACCCAATGAAATTGATAATGAACTTGGTGGGCAGAAACCGACCCTCCCGAAAGATACTTCAGACAGCCAGTGCTCGGAATTATCCAAAGACAGTGGTAATTGGATGCAGGAAAGAAAAGATTCTTCATCCCCTTTACTTGAGACAGAAACTAGTGAGGTTCTTACATCAGTTCCTTGTGTGCTTGTAACCCCAAAAAGAAAATTAGCTGGACATTTGGCAGTGATGAAAAATGTCTTGCATTTCTTTGGTGAATTTTTGGTTGAAGGTAGTGGAGGATCATCTGTTTTCAGAAACTTCCATGCTCCAAGTAATCATGATTTGGCCAAACCTGATCAAAAGCAAAAGTCCCTGAAACAGCCTCTAAATCTTGGTTTGGATTCTGAGAAGGCAGCTACAGTTGATAAATTTGATGCAATGAATGAAACTGTTCTTAATAGAAAACAATTAAAAAATATTAAGCGCCACAGGAGATGGAATATTGGCAAGAAAAGCTGTCAGTTTGACTCGTTATTTGCTTCGATATTCTGCAATAGAGATTTTCTTCAGCGATTCATCTGCACCAGTATTTTTGAATTTTGCATCCCAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Beach DUF4704 DUF4800 Laminin_G_3 PH_BEACH WD40

Protein Analysis

1543

Amino Acids

174.01

Weight (kDa)

6.81

Isoelectric Point (pI)

46.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neurobeachin PF20425 1 - 68 6.9e-34 Neurobeachin alpha solenoid region
Laminin_G_3 PF13385 81 - 253 7.1e-09 Concanavalin A-like lectin/glucanases superfamily
DUF4704 PF15787 320 - 839 1.3e-160 Neurobeachin/BDCP, DUF4704 alpha solenoid region
DUF4800 PF16057 1193 - 1296 2.9e-07 Domain of unknown function (DUF4800)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2571, 2918
Acc36I ACCTGC 2 cut(s) 2228, 2966
AccB1I GGYRCC 1 cut(s) 3135
AccB7I CCANNNNNTGG 1 cut(s) 2987
AccI GTMKAC 1 cut(s) 1400
AccII CGCG 2 cut(s) 321, 1073
AciI CCGC 3 cut(s) 1332, 2189, 2861
AcoI YGGCCR 2 cut(s) 2989, 4359
AcuI CTGAAG 8 cut(s) 458, 1176, 1838, 1965, 2027, 2628, 4080, 4565
AcvI CACGTG 1 cut(s) 3002
AfeI AGCGCT 1 cut(s) 3989
AfiI CCNNNNNNNGG 8 cut(s) 341, 460, 701, 1985, 2119, 2975, 2987, 4111
AflIII ACRYGT 4 cut(s) 786, 1431, 2646, 3741
AhdI GACNNNNNGTC 1 cut(s) 449
AhlI ACTAGT 1 cut(s) 4187
AjiI CACGTC 1 cut(s) 1813
AjnI CCWGG 8 cut(s) 831, 1803, 2139, 2330, 2736, 2822, 2830, 3839
Alw21I GWGCWC 7 cut(s) 1170, 1774, 1812, 3001, 3340, 3570, 4112
Alw26I GTCTC 9 cut(s) 1597, 1897, 1980, 2256, 2492, 3242, 3655, 3856, 4172
AlwNI CAGNNNCTG 1 cut(s) 3509
Aor51HI AGCGCT 1 cut(s) 3989
AoxI GGCC 5 cut(s) 281, 776, 1987, 2989, 4359
ArsI GACNNNNNNTTYG 4 cut(s) 1618, 1650, 4532, 4564
Asp700I GAANNNNTTC 3 cut(s) 414, 4156, 4464
AspLEI GCGC 5 cut(s) 632, 1075, 3079, 3990, 4500
AspS9I GGNCC 8 cut(s) 215, 713, 776, 946, 1988, 2939, 2978, 3770
AsuC2I CCSGG 1 cut(s) 2639
AsuHPI GGTGA 7 cut(s) 572, 927, 1667, 2437, 2946, 2958, 4298
AsuII TTCGAA 1 cut(s) 1716
AsuNHI GCTAGC 2 cut(s) 2108, 3496
AvaII GGWCC 6 cut(s) 215, 713, 946, 2939, 2978, 3770
AxyI CCTNAGG 1 cut(s) 1667
BaeGI GKGCMC 2 cut(s) 3140, 3969
BaeI ACNNNNGTAYC 2 cut(s) 3728, 3761
BalI TGGCCA 2 cut(s) 2991, 4361
BamHI GGATCC 2 cut(s) 846, 2826
BanI GGYRCC 1 cut(s) 3135
BanII GRGCYC 2 cut(s) 1170, 3570
BarI GAAGNNNNNNTAC 2 cut(s) 3618, 3650
BauI CACGAG 2 cut(s) 1135, 1494
BbrPI CACGTG 1 cut(s) 3002
BbsI GAAGAC 2 cut(s) 42, 2595
Bbv12I GWGCWC 7 cut(s) 1170, 1774, 1812, 3001, 3340, 3570, 4112
BbvCI CCTCAGC 1 cut(s) 1269
BcgI CGANNNNNNTGC 2 cut(s) 4575, 4609
BciT130I CCWGG 8 cut(s) 833, 1805, 2141, 2332, 2738, 2824, 2832, 3841
BciVI GTATCC 1 cut(s) 3729
BclI TGATCA 3 cut(s) 1915, 2580, 4369
BcnI CCSGG 1 cut(s) 2639
BcoDI GTCTC 9 cut(s) 1597, 1897, 1980, 2256, 2492, 3242, 3655, 3856, 4172
BcuI ACTAGT 1 cut(s) 4187
BfmI CTRYAG 5 cut(s) 2973, 3033, 3045, 3597, 4431
BfoI RGCGCY 2 cut(s) 3991, 4501
BfuAI ACCTGC 2 cut(s) 2228, 2966
BfuI GTATCC 1 cut(s) 3729
BglII AGATCT 2 cut(s) 1967, 3179
BlpI GCTNAGC 1 cut(s) 1883
Bme1390I CCNGG 9 cut(s) 833, 1805, 2141, 2332, 2639, 2738, 2824, 2832, 3841
Bme18I GGWCC 6 cut(s) 215, 713, 946, 2939, 2978, 3770
BmeRI GACNNNNNGTC 1 cut(s) 449
BmgBI CACGTC 1 cut(s) 1813
BmgT120I GGNCC 8 cut(s) 215, 713, 776, 946, 1988, 2939, 2978, 3770
BmiI GGNNCC 5 cut(s) 216, 848, 2828, 2940, 3137
BmrFI CCNGG 9 cut(s) 833, 1805, 2141, 2332, 2639, 2738, 2824, 2832, 3841
BmrI ACTGGG 2 cut(s) 249, 1602
BmtI GCTAGC 2 cut(s) 2112, 3500
BmuI ACTGGG 2 cut(s) 249, 1602
BpiI GAAGAC 2 cut(s) 42, 2595
BpmI CTGGAG 3 cut(s) 991, 1826, 2768
Bpu10I CCTNAGC 2 cut(s) 1269, 3975
Bpu1102I GCTNAGC 1 cut(s) 1883
Bpu14I TTCGAA 1 cut(s) 1716
BpuEI CTTGAG 1 cut(s) 4196
BpuMI CCSGG 1 cut(s) 2639
BsaAI YACGTR 2 cut(s) 3002, 3563
BsaBI GATNNNNATC 6 cut(s) 561, 690, 1458, 2286, 2681, 3543
BsaI GGTCTC 3 cut(s) 1597, 1980, 3655
BsaJI CCNNGG 9 cut(s) 700, 1463, 1651, 1897, 2736, 2830, 2831, 3429, 3773
BsaXI ACNNNNNCTCC 4 cut(s) 3552, 3582, 4065, 4095
Bsc4I CCNNNNNNNGG 8 cut(s) 341, 460, 701, 1985, 2119, 2975, 2987, 4111
Bse1I ACTGG 8 cut(s) 186, 244, 454, 1608, 2670, 2751, 4105, 4599
Bse21I CCTNAGG 1 cut(s) 1667
Bse3DI GCAATG 4 cut(s) 1007, 1121, 3120, 4458
Bse8I GATNNNNATC 6 cut(s) 561, 690, 1458, 2286, 2681, 3543
BseBI CCWGG 8 cut(s) 833, 1805, 2141, 2332, 2738, 2824, 2832, 3841
BseDI CCNNGG 9 cut(s) 700, 1463, 1651, 1897, 2736, 2830, 2831, 3429, 3773
BseJI GATNNNNATC 6 cut(s) 561, 690, 1458, 2286, 2681, 3543
BseLI CCNNNNNNNGG 8 cut(s) 341, 460, 701, 1985, 2119, 2975, 2987, 4111
BseMI GCAATG 4 cut(s) 1007, 1121, 3120, 4458
BseMII CTCAG 7 cut(s) 738, 1283, 1681, 1897, 1917, 3966, 4410
BseNI ACTGG 8 cut(s) 186, 244, 454, 1608, 2670, 2751, 4105, 4599
BseRI GAGGAG 3 cut(s) 1257, 3719, 3722
BseSI GKGCMC 2 cut(s) 3140, 3969
BsgI GTGCAG 4 cut(s) 296, 381, 1436, 4579
Bsh1236I CGCG 2 cut(s) 321, 1073
BshFI GGCC 5 cut(s) 283, 778, 1989, 2991, 4361
BshNI GGYRCC 1 cut(s) 3135
BsiHKAI GWGCWC 7 cut(s) 1170, 1774, 1812, 3001, 3340, 3570, 4112
BsiSI CCGG 2 cut(s) 2638, 2714
BslFI GGGAC 4 cut(s) 1541, 2654, 2952, 4369
BslI CCNNNNNNNGG 8 cut(s) 341, 460, 701, 1985, 2119, 2975, 2987, 4111
BsmAI GTCTC 9 cut(s) 1597, 1897, 1980, 2256, 2492, 3242, 3655, 3856, 4172
BsmFI GGGAC 4 cut(s) 1541, 2654, 2952, 4369
BsmI GAATGC 2 cut(s) 2332, 3686
BsnI GGCC 5 cut(s) 283, 778, 1989, 2991, 4361
Bso31I GGTCTC 3 cut(s) 1597, 1980, 3655
Bsp119I TTCGAA 1 cut(s) 1716
Bsp1286I GDGCHC 9 cut(s) 1170, 1774, 1812, 3001, 3140, 3340, 3570, 3969, 4112
Bsp1720I GCTNAGC 1 cut(s) 1883
Bsp19I CCATGG 1 cut(s) 3773
BspACI CCGC 3 cut(s) 1332, 2189, 2861
BspANI GGCC 5 cut(s) 283, 778, 1989, 2991, 4361
BspCNI CTCAG 7 cut(s) 739, 1282, 1680, 1896, 1918, 3967, 4411
BspFNI CGCG 2 cut(s) 321, 1073
BspHI TCATGA 2 cut(s) 3700, 4351
BspLI GGNNCC 5 cut(s) 216, 848, 2828, 2940, 3137
BspMAI CTGCAG 4 cut(s) 2977, 3037, 3049, 3601
BspMI ACCTGC 2 cut(s) 2228, 2966
BspOI GCTAGC 2 cut(s) 2112, 3500
BspQI GCTCTTC 3 cut(s) 511, 2100, 3673
BspT104I TTCGAA 1 cut(s) 1716
BspT107I GGYRCC 1 cut(s) 3135
BspTNI GGTCTC 3 cut(s) 1597, 1980, 3655
BsrDI GCAATG 4 cut(s) 1007, 1121, 3120, 4458
BsrI ACTGG 8 cut(s) 186, 244, 454, 1608, 2670, 2751, 4105, 4599
BssECI CCNNGG 9 cut(s) 700, 1463, 1651, 1897, 2736, 2830, 2831, 3429, 3773
BssNAI GTATAC 1 cut(s) 1401
BssSI CACGAG 2 cut(s) 1135, 1494
BssT1I CCWWGG 5 cut(s) 1463, 1651, 1897, 3429, 3773
Bst1107I GTATAC 1 cut(s) 1401
Bst2BI CACGAG 2 cut(s) 1135, 1494
Bst2UI CCWGG 8 cut(s) 833, 1805, 2141, 2332, 2738, 2824, 2832, 3841
Bst6I CTCTTC 6 cut(s) 376, 511, 2100, 2490, 2604, 3673
BstAPI GCANNNNNTGC 2 cut(s) 1123, 3524
BstBAI YACGTR 2 cut(s) 3002, 3563
BstBI TTCGAA 1 cut(s) 1716
BstC8I GCNNGC 7 cut(s) 995, 1487, 1794, 1889, 2110, 3399, 3498
BstDSI CCRYGG 1 cut(s) 3773
BstFNI CGCG 2 cut(s) 321, 1073
BstH2I RGCGCY 2 cut(s) 3991, 4501
BstHHI GCGC 5 cut(s) 632, 1075, 3079, 3990, 4500
BstMAI GTCTC 9 cut(s) 1597, 1897, 1980, 2256, 2492, 3242, 3655, 3856, 4172
BstNI CCWGG 8 cut(s) 833, 1805, 2141, 2332, 2738, 2824, 2832, 3841
BstNSI RCATGY 4 cut(s) 790, 909, 1435, 3745
BstSCI CCNGG 9 cut(s) 831, 1803, 2139, 2330, 2637, 2736, 2822, 2830, 3839
BstSFI CTRYAG 5 cut(s) 2973, 3033, 3045, 3597, 4431
BstSLI GKGCMC 2 cut(s) 3140, 3969
BstUI CGCG 2 cut(s) 321, 1073
BstV2I GAAGAC 2 cut(s) 42, 2595
BstX2I RGATCY 4 cut(s) 846, 1967, 2826, 3179
BstYI RGATCY 4 cut(s) 846, 1967, 2826, 3179
BstZ17I GTATAC 1 cut(s) 1401
Bsu36I CCTNAGG 1 cut(s) 1667
BsuI GTATCC 1 cut(s) 3729
BsuRI GGCC 5 cut(s) 283, 778, 1989, 2991, 4361
BtgI CCRYGG 1 cut(s) 3773
BtrI CACGTC 1 cut(s) 1813
BtsI GCAGTG 5 cut(s) 284, 1787, 2528, 3079, 4263
BveI ACCTGC 2 cut(s) 2228, 2966
Cac8I GCNNGC 7 cut(s) 995, 1487, 1794, 1889, 2110, 3399, 3498
CaiI CAGNNNCTG 1 cut(s) 3509
CciI TCATGA 2 cut(s) 3700, 4351
CfoI GCGC 5 cut(s) 632, 1075, 3079, 3990, 4500
Cfr13I GGNCC 8 cut(s) 215, 713, 776, 946, 1988, 2939, 2978, 3770
CseI GACGC 1 cut(s) 3196
CsiI ACCWGGT 2 cut(s) 831, 2139
CspCI CAANNNNNGTGG 2 cut(s) 4111, 4146
DraI TTTAAA 1 cut(s) 1302
DriI GACNNNNNGTC 1 cut(s) 449
EaeI YGGCCR 2 cut(s) 2989, 4359
Eam1104I CTCTTC 6 cut(s) 376, 511, 2100, 2490, 2604, 3673
Eam1105I GACNNNNNGTC 1 cut(s) 449
EarI CTCTTC 6 cut(s) 376, 511, 2100, 2490, 2604, 3673
Ecl136II GAGCTC 2 cut(s) 1168, 3568
Eco130I CCWWGG 5 cut(s) 1463, 1651, 1897, 3429, 3773
Eco24I GRGCYC 2 cut(s) 1170, 3570
Eco31I GGTCTC 3 cut(s) 1597, 1980, 3655
Eco32I GATATC 2 cut(s) 1693, 3354
Eco47I GGWCC 6 cut(s) 215, 713, 946, 2939, 2978, 3770
Eco47III AGCGCT 1 cut(s) 3989
Eco53kI GAGCTC 2 cut(s) 1168, 3568
Eco57I CTGAAG 8 cut(s) 458, 1176, 1838, 1965, 2027, 2628, 4080, 4565
Eco72I CACGTG 1 cut(s) 3002
Eco81I CCTNAGG 1 cut(s) 1667
EcoICRI GAGCTC 2 cut(s) 1168, 3568
EcoO109I RGGNCCY 1 cut(s) 215
EcoRII CCWGG 8 cut(s) 831, 1803, 2139, 2330, 2736, 2822, 2830, 3839
EcoRV GATATC 2 cut(s) 1693, 3354
EcoT14I CCWWGG 5 cut(s) 1463, 1651, 1897, 3429, 3773
EcoT22I ATGCAT 1 cut(s) 1218
EcoT38I GRGCYC 2 cut(s) 1170, 3570
ErhI CCWWGG 5 cut(s) 1463, 1651, 1897, 3429, 3773
FalI AAGNNNNNCTT 2 cut(s) 852, 884
FaqI GGGAC 4 cut(s) 1541, 2654, 2952, 4369
FauNDI CATATG 2 cut(s) 1758, 1836
FbaI TGATCA 3 cut(s) 1915, 2580, 4369
FblI GTMKAC 1 cut(s) 1400
FriOI GRGCYC 2 cut(s) 1170, 3570
GlaI GCGC 5 cut(s) 631, 1074, 3078, 3989, 4499
GsuI CTGGAG 3 cut(s) 991, 1826, 2768
HaeII RGCGCY 2 cut(s) 3991, 4501
HaeIII GGCC 5 cut(s) 283, 778, 1989, 2991, 4361
HapII CCGG 2 cut(s) 2638, 2714
HgaI GACGC 1 cut(s) 3196
HhaI GCGC 5 cut(s) 632, 1075, 3079, 3990, 4500
Hin6I GCGC 5 cut(s) 630, 1073, 3077, 3988, 4498
HinP1I GCGC 5 cut(s) 630, 1073, 3077, 3988, 4498
HincII GTYRAC 3 cut(s) 1816, 2337, 3379
HindII GTYRAC 3 cut(s) 1816, 2337, 3379
HindIII AAGCTT 3 cut(s) 2304, 2351, 3618
HpaI GTTAAC 1 cut(s) 2337
HpaII CCGG 2 cut(s) 2638, 2714
HphI GGTGA 7 cut(s) 572, 927, 1667, 2437, 2946, 2958, 4298
Hpy166II GTNNAC 7 cut(s) 89, 1401, 1816, 2337, 2528, 2588, 3379
Hpy8I GTNNAC 7 cut(s) 89, 1401, 1816, 2337, 2528, 2588, 3379
Hpy99I CGWCG 2 cut(s) 1325, 3849
HpyCH4IV ACGT 7 cut(s) 1012, 1812, 2648, 3001, 3202, 3562, 3847
HpySE526I ACGT 7 cut(s) 1012, 1812, 2648, 3001, 3202, 3562, 3847
HspAI GCGC 5 cut(s) 630, 1073, 3077, 3988, 4498
Ksp22I TGATCA 3 cut(s) 1915, 2580, 4369
KspAI GTTAAC 1 cut(s) 2337
LguI GCTCTTC 3 cut(s) 511, 2100, 3673
MabI ACCWGGT 2 cut(s) 831, 2139
MaeII ACGT 7 cut(s) 1012, 1812, 2648, 3001, 3202, 3562, 3847
MfeI CAATTG 1 cut(s) 2850
MflI RGATCY 4 cut(s) 846, 1967, 2826, 3179
MhlI GDGCHC 9 cut(s) 1170, 1774, 1812, 3001, 3140, 3340, 3570, 3969, 4112
MlsI TGGCCA 2 cut(s) 2991, 4361
MluNI TGGCCA 2 cut(s) 2991, 4361
MlyI GAGTC 3 cut(s) 434, 3428, 4535
MmeI TCCRAC 3 cut(s) 1021, 3235, 3306
Mox20I TGGCCA 2 cut(s) 2991, 4361
Mph1103I ATGCAT 1 cut(s) 1218
MroXI GAANNNNTTC 3 cut(s) 414, 4156, 4464
MscI TGGCCA 2 cut(s) 2991, 4361
MslI CAYNNNNRTG 2 cut(s) 904, 3879
Msp20I TGGCCA 2 cut(s) 2991, 4361
MspA1I CMGCKG 2 cut(s) 3248, 3280
MspI CCGG 2 cut(s) 2638, 2714
MspR9I CCNGG 9 cut(s) 833, 1805, 2141, 2332, 2639, 2738, 2824, 2832, 3841
MunI CAATTG 1 cut(s) 2850
Mva1269I GAATGC 2 cut(s) 2332, 3686
MvaI CCWGG 8 cut(s) 833, 1805, 2141, 2332, 2738, 2824, 2832, 3841
MvnI CGCG 2 cut(s) 321, 1073
NciI CCSGG 1 cut(s) 2639
NcoI CCATGG 1 cut(s) 3773
NdeI CATATG 2 cut(s) 1758, 1836
NheI GCTAGC 2 cut(s) 2108, 3496
NlaIV GGNNCC 5 cut(s) 216, 848, 2828, 2940, 3137
NmeAIII GCCGAG 2 cut(s) 804, 3416
NmuCI GTSAC 4 cut(s) 1147, 2503, 2921, 2952
NsiI ATGCAT 1 cut(s) 1218
NspI RCATGY 4 cut(s) 790, 909, 1435, 3745
NspV TTCGAA 1 cut(s) 1716
PagI TCATGA 2 cut(s) 3700, 4351
PasI CCCWGGG 1 cut(s) 2831
PciI ACATGT 3 cut(s) 786, 1431, 3741
PciSI GCTCTTC 3 cut(s) 511, 2100, 3673
PcsI WCGNNNNNNNCGW 1 cut(s) 1630
PctI GAATGC 2 cut(s) 2332, 3686
PdmI GAANNNNTTC 3 cut(s) 414, 4156, 4464
PflFI GACNNNGTC 1 cut(s) 47
PflMI CCANNNNNTGG 1 cut(s) 2987
PfoI TCCNGGA 2 cut(s) 1803, 2822
PleI GAGTC 3 cut(s) 433, 3428, 4535
PmaCI CACGTG 1 cut(s) 3002
PmlI CACGTG 1 cut(s) 3002
PpsI GAGTC 3 cut(s) 433, 3428, 4535
Ppu21I YACGTR 2 cut(s) 3002, 3563
PpuMI RGGWCCY 1 cut(s) 215
PscI ACATGT 3 cut(s) 786, 1431, 3741
PsiI TTATAA 2 cut(s) 2571, 2918
Psp124BI GAGCTC 2 cut(s) 1170, 3570
Psp5II RGGWCCY 1 cut(s) 215
Psp6I CCWGG 8 cut(s) 831, 1803, 2139, 2330, 2736, 2822, 2830, 3839
PspCI CACGTG 1 cut(s) 3002
PspGI CCWGG 8 cut(s) 831, 1803, 2139, 2330, 2736, 2822, 2830, 3839
PspN4I GGNNCC 5 cut(s) 216, 848, 2828, 2940, 3137
PspPI GGNCC 8 cut(s) 215, 713, 776, 946, 1988, 2939, 2978, 3770
PspPPI RGGWCCY 1 cut(s) 215
PstI CTGCAG 4 cut(s) 2977, 3037, 3049, 3601
PstNI CAGNNNCTG 1 cut(s) 3509
PsuI RGATCY 4 cut(s) 846, 1967, 2826, 3179
PsyI GACNNNGTC 1 cut(s) 47
PvuII CAGCTG 2 cut(s) 3248, 3280
RseI CAYNNNNRTG 2 cut(s) 904, 3879
SacI GAGCTC 2 cut(s) 1170, 3570
SapI GCTCTTC 3 cut(s) 511, 2100, 3673
Sau96I GGNCC 8 cut(s) 215, 713, 776, 946, 1988, 2939, 2978, 3770
SchI GAGTC 3 cut(s) 434, 3428, 4535
ScrFI CCNGG 9 cut(s) 833, 1805, 2141, 2332, 2639, 2738, 2824, 2832, 3841
SduI GDGCHC 9 cut(s) 1170, 1774, 1812, 3001, 3140, 3340, 3570, 3969, 4112
SexAI ACCWGGT 2 cut(s) 831, 2139
SfcI CTRYAG 5 cut(s) 2973, 3033, 3045, 3597, 4431
SfuI TTCGAA 1 cut(s) 1716
SinI GGWCC 6 cut(s) 215, 713, 946, 2939, 2978, 3770
SmiMI CAYNNNNRTG 2 cut(s) 904, 3879
SmlI CTYRAG 1 cut(s) 4175
SmoI CTYRAG 1 cut(s) 4175
SpeI ACTAGT 1 cut(s) 4187
SsiI CCGC 3 cut(s) 1332, 2189, 2861
SspI AATATT 4 cut(s) 469, 3025, 4492, 4516
SstI GAGCTC 2 cut(s) 1170, 3570
StyD4I CCNGG 9 cut(s) 831, 1803, 2139, 2330, 2637, 2736, 2822, 2830, 3839
StyI CCWWGG 5 cut(s) 1463, 1651, 1897, 3429, 3773
TaiI ACGT 7 cut(s) 1015, 1815, 2651, 3004, 3205, 3565, 3850
TaqII GACCGA 2 cut(s) 692, 1962
TauI GCSGC 1 cut(s) 1335
TseFI GTSAC 4 cut(s) 1147, 2503, 2921, 2952
Tsp45I GTSAC 4 cut(s) 1147, 2503, 2921, 2952
TspGWI ACGGA 2 cut(s) 1911, 2697
Tth111I GACNNNGTC 1 cut(s) 47
Van91I CCANNNNNTGG 1 cut(s) 2987
VpaK11BI GGWCC 6 cut(s) 215, 713, 946, 2939, 2978, 3770
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 4 cut(s) 790, 909, 1435, 3745
XcmI CCANNNNNNNNNTGG 2 cut(s) 2768, 2999
XmiI GTMKAC 1 cut(s) 1400
XmnI GAANNNNTTC 3 cut(s) 414, 4156, 4464
Zsp2I ATGCAT 1 cut(s) 1218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.