Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0005162

Physical Location & Seq

Genomic Coordinates Reverse (-)

6696704 .. 6704457

Gene Structure 7754 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGTTAAAATTGAAGTTTAAGTTGAAGGAGACATCCCACGGCCCACTCACTTTCTTGCCTTCAGTCCTCTCCTCCGACCCCTGGACCGTGCAGCCAGTTAACCTAGCCATCCTCTTCTTCTTTTCGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGATGGCGGAGGAGGCAATTCTAGGATACCTGGAGTCAAAGGATGAAATATCAGATTCCGGTCAGTTTGCAACTGAACGTGGACTCGATCACAACGAGGTTGTCAACGTTATCAAGAGCCTCCATGGTTTCAGATACGTTGTTGCACAGGACATCAAAAGAGAGATGTGGATGCTTACTGACGAAGGAAATGCATACACTGTTACCGGGTCACCGGAAGTGCAGCTGTTCCTGGCCATACCACCTGAGGGTATCCCCAAAGAAGAGTTGCAGAAAAAGCTGGACCCATCAGTTTTCAAAATAGGTAGCGCTCAGGCTGCAAAGAGAAAATGGGTGGAGATGGGCAAGCAACTAGTAACCCGAAAGATCCAACATGTGGAGGACGAAGTTAAAAATTTGCTTCTACAGATACAAGATGGGCAGGCCATCAACCAAGATGAAATTAAAGCTCTCAAAGCAAGAAAACTTATTGTTCCACAAACGTGGAAGGGCTACTCGGTTAAAAAGGGCCCCAATTATGCTCCAAAGAGAAAGAAAGTAGCTACAGATTTGACTCGAGAGAATCTTCAAAGGGGTGATTGGAAGGAACTAGAGTTCAAAGAGTATAACTTCAGTGCTAAAGGTCTGCCTATTGAAAGTGGTCATCTTCATCCACTGCTCAAGGTACGACATCAGTTGAAGGGTATTTTCAGGCAAATGGGGTTTGAGGAGATGCCTACAAACAATTATGTTGAGAGCAGCTTCTGGAACTTTGATGCACTTTTCCAGCCACAACAACACCCTGCCCGTGATTCGCATGATACATTTTTCCTACAAGTTCCTTCAACCACCAAGCAACTGCCCGAAGATTACGTTGAGCGGGTGAAGCAGATTCATGAGTCTGGTGGTTATCAATCCCGAGGATATGGATATGATTGGAAAAGAGAGGAAGCAGACAAAAATCTTCTGCGAACTCACACAACCGCTGTTTCCTCCAGGATGCTGTACGCACTAGCCCAGAAACCATTTGTGCCCAAAAAGTACTACTCTATAGATCGTGTGTTCAGAAATGAAGCAGTAGATCGAACACATCTTGCAGAGTTCCACCAGATAGAAGGTTTGGTATGTGATCGAGGGCTTGCTCTTGGTGACTTGTTAGGAGTACTCAAAGAATTCTTCTCACGTCTGGGCATGTCGAAACTGCGTTTCAAGCCGGCTTATAACCCATATACTGAGCCTAGCATGGAGATTTTCAGTTTTCATGAAGGCCTGGGGAAATGGGTGGAGATTGGAAATTCGGGCATGTTTAGACCTGAAATGCTGCTTCCTATGGGACTCCCAGAAGATGTTCGCGTTATTGCATGGGGCCTCTCCCTTGAAAGACCGACCATGATTCTCTATGGGATTGATAACATCAGGGATCTTTTCGGACACAAGGTCGATCTTGGTCTCATCAAGAAGAACTCGATCTGTCGCCTTGGATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2d

Protein Analysis

540

Amino Acids

62.01

Weight (kDa)

8.76

Isoelectric Point (pI)

37.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD1	PF18552	55 - 105	3.8e-09	PheRS DNA binding domain 1
PheRS_DBD3	PF18553	122 - 177	6.6e-14	PheRS DNA binding domain 3
tRNA-synt_2d	PF01409	253 - 526	4.2e-90	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39280 AT4G39280
fragaria_vesca	FvH4_2g08790 FvH4_2g08790 FvH4_3g28200 FvH4_3g28200
malus_domestica	MD05G1066200.v1.1 MD10G1076200.v1.1
prunus_persica	Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1 Prupe.8G096800_v2.0.a1
pyrus_communis	pycom10g05960
rosa_chinensis	RchiOBHm_Chr6g0264251 RchiOBHm_Chr7g0204471
rosa_laevigata	RLG00000003457 RLG00000014275
rosa_multiflora	Rmu_co8442849.1_g000001 Rmu_sc0010483.1_g000023
rosa_roxburghii	Rroxscaffold_176G00431660 Rroxscaffold_3G00253060
rosa_rugosa	Rorug06G0011500 Rorug07G0084400
rosa_samantha	Rh6AG130900 Rh6BG128000 Rh6CG126400 Rh6DG113500 Rh7AG213800 Rh7CG226600 Rh7DG221200
rosa_wichuraiana	Rw6G011440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1353, 1618
AccB7I	CCANNNNNTGG	1 cut(s)	529
AccBSI	CCGCTC	1 cut(s)	1012
AccII	CGCG	2 cut(s)	155, 1485
AciI	CCGC	3 cut(s)	161, 1012, 1116
AclI	AACGTT	1 cut(s)	261
AclWI	GGATC	2 cut(s)	514, 1560
AcoI	YGGCCR	1 cut(s)	387
AcsI	RAATTY	3 cut(s)	547, 1304, 1426
AcuI	CTGAAG	2 cut(s)	45, 748
AfaI	GTAC	4 cut(s)	819, 1139, 1175, 1296
AfeI	AGCGCT	1 cut(s)	463
AfiI	CCNNNNNNNGG	3 cut(s)	81, 401, 529
AflIII	ACRYGT	1 cut(s)	526
AhdI	GACNNNNNGTC	1 cut(s)	1568
AhlI	ACTAGT	1 cut(s)	505
AjiI	CACGTC	1 cut(s)	1316
AjnI	CCWGG	5 cut(s)	80, 183, 384, 1127, 1401
AleI	CACNNNNGTG	1 cut(s)	634
AloI	GAACNNNNNNTCC	2 cut(s)	731, 763
AluBI	AGCT	5 cut(s)	379, 433, 602, 695, 894
AluI	AGCT	5 cut(s)	379, 433, 602, 695, 894
Alw26I	GTCTC	2 cut(s)	23, 1586
AlwI	GGATC	2 cut(s)	514, 1560
AlwNI	CAGNNNCTG	1 cut(s)	897
Ama87I	CYCGRG	2 cut(s)	708, 1050
Aor51HI	AGCGCT	1 cut(s)	463
AoxI	GGCC	6 cut(s)	40, 387, 576, 661, 1399, 1498
ApaI	GGGCCC	1 cut(s)	665
ApeKI	GCWGC	5 cut(s)	91, 376, 470, 891, 1453
ApoI	RAATTY	3 cut(s)	547, 1304, 1426
Asp700I	GAANNNNTTC	1 cut(s)	1479
AspLEI	GCGC	2 cut(s)	155, 464
AspS9I	GGNCC	6 cut(s)	41, 84, 436, 661, 662, 1498
AsuC2I	CCSGG	1 cut(s)	361
AsuHPI	GGTGA	4 cut(s)	357, 740, 1027, 1292
AvaI	CYCGRG	2 cut(s)	708, 1050
AvaII	GGWCC	2 cut(s)	84, 436
AxyI	CCTNAGG	1 cut(s)	399
BaeGI	GKGCMC	2 cut(s)	665, 1167
BalI	TGGCCA	1 cut(s)	389
BanII	GRGCYC	1 cut(s)	665
BbvI	GCAGC	5 cut(s)	103, 388, 457, 903, 1440
BccI	CCATC	6 cut(s)	116, 151, 448, 487, 563, 587
BceAI	ACGGC	1 cut(s)	55
BcgI	CGANNNNNNTGC	2 cut(s)	326, 360
BciT130I	CCWGG	5 cut(s)	82, 185, 386, 1129, 1403
BciVI	GTATCC	2 cut(s)	173, 416
BcnI	CCSGG	1 cut(s)	361
BcoDI	GTCTC	2 cut(s)	23, 1586
BcuI	ACTAGT	1 cut(s)	505
BfaI	CTAG	6 cut(s)	104, 176, 506, 743, 1145, 1371
BfmI	CTRYAG	3 cut(s)	557, 696, 1182
BfoI	RGCGCY	1 cut(s)	465
BfuI	GTATCC	2 cut(s)	173, 416
BisI	GCNGC	5 cut(s)	92, 377, 471, 892, 1454
BlsI	GCNGC	5 cut(s)	93, 378, 472, 893, 1455
BmcAI	AGTACT	2 cut(s)	1175, 1296
Bme1390I	CCNGG	6 cut(s)	82, 185, 361, 386, 1129, 1403
Bme18I	GGWCC	2 cut(s)	84, 436
BmeRI	GACNNNNNGTC	1 cut(s)	1568
BmeT110I	CYCGRG	2 cut(s)	708, 1050
BmgBI	CACGTC	1 cut(s)	1316
BmgT120I	GGNCC	6 cut(s)	41, 84, 436, 661, 662, 1498
BmiI	GGNNCC	4 cut(s)	438, 663, 664, 1499
BmrFI	CCNGG	6 cut(s)	82, 185, 361, 386, 1129, 1403
BmsI	GCATC	4 cut(s)	315, 855, 898, 1122
BpmI	CTGGAG	2 cut(s)	206, 1111
Bpu10I	CCTNAGC	1 cut(s)	465
BpuEI	CTTGAG	1 cut(s)	797
BpuMI	CCSGG	1 cut(s)	361
BsaI	GGTCTC	1 cut(s)	1586
BsaJI	CCNNGG	6 cut(s)	37, 80, 277, 1051, 1402, 1609
BsaWI	WCCGGW	2 cut(s)	212, 367
Bsc4I	CCNNNNNNNGG	3 cut(s)	81, 401, 529
Bse118I	RCCGGY	1 cut(s)	1345
Bse1I	ACTGG	1 cut(s)	95
Bse21I	CCTNAGG	1 cut(s)	399
BseBI	CCWGG	5 cut(s)	82, 185, 386, 1129, 1403
BseDI	CCNNGG	6 cut(s)	37, 80, 277, 1051, 1402, 1609
BseGI	GGATG	6 cut(s)	32, 108, 202, 330, 802, 1137
BseLI	CCNNNNNNNGG	3 cut(s)	81, 401, 529
BseMII	CTCAG	3 cut(s)	390, 479, 1356
BseNI	ACTGG	1 cut(s)	95
BseRI	GAGGAG	3 cut(s)	61, 179, 875
BseSI	GKGCMC	2 cut(s)	665, 1167
BseXI	GCAGC	5 cut(s)	103, 388, 457, 903, 1440
BsgI	GTGCAG	2 cut(s)	110, 395
Bsh1236I	CGCG	2 cut(s)	155, 1485
BshFI	GGCC	6 cut(s)	42, 389, 578, 663, 1401, 1500
BsiHKCI	CYCGRG	2 cut(s)	708, 1050
BsiSI	CCGG	4 cut(s)	213, 360, 368, 1346
BslFI	GGGAC	1 cut(s)	1479
BslI	CCNNNNNNNGG	3 cut(s)	81, 401, 529
BsmAI	GTCTC	2 cut(s)	23, 1586
BsmFI	GGGAC	1 cut(s)	1479
BsnI	GGCC	6 cut(s)	42, 389, 578, 663, 1401, 1500
Bso31I	GGTCTC	1 cut(s)	1586
BsoBI	CYCGRG	2 cut(s)	708, 1050
Bsp120I	GGGCCC	1 cut(s)	661
Bsp1286I	GDGCHC	2 cut(s)	665, 1167
Bsp143I	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
Bsp19I	CCATGG	1 cut(s)	277
BspACI	CCGC	3 cut(s)	161, 1012, 1116
BspANI	GGCC	6 cut(s)	42, 389, 578, 663, 1401, 1500
BspCNI	CTCAG	3 cut(s)	391, 478, 1357
BspFNI	CGCG	2 cut(s)	155, 1485
BspHI	TCATGA	2 cut(s)	1027, 1393
BspLI	GGNNCC	4 cut(s)	438, 663, 664, 1499
BspPI	GGATC	2 cut(s)	514, 1560
BspTNI	GGTCTC	1 cut(s)	1586
BsrBI	CCGCTC	1 cut(s)	1012
BsrFI	RCCGGY	1 cut(s)	1345
BsrI	ACTGG	1 cut(s)	95
BssAI	RCCGGY	1 cut(s)	1345
BssECI	CCNNGG	6 cut(s)	37, 80, 277, 1051, 1402, 1609
BssMI	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
BssT1I	CCWWGG	2 cut(s)	277, 1609
Bst2UI	CCWGG	5 cut(s)	82, 185, 386, 1129, 1403
Bst4CI	ACNGT	2 cut(s)	88, 355
Bst6I	CTCTTC	2 cut(s)	119, 411
BstC8I	GCNNGC	4 cut(s)	500, 576, 1272, 1347
BstDEI	CTNAG	3 cut(s)	399, 465, 1365
BstDSI	CCRYGG	2 cut(s)	37, 277
BstEII	GGTNACC	1 cut(s)	363
BstF5I	GGATG	6 cut(s)	32, 108, 202, 330, 802, 1137
BstFNI	CGCG	2 cut(s)	155, 1485
BstH2I	RGCGCY	1 cut(s)	465
BstHHI	GCGC	2 cut(s)	155, 464
BstKTI	GATC	8 cut(s)	244, 522, 1189, 1216, 1264, 1555, 1576, 1602
BstMAI	GTCTC	2 cut(s)	23, 1586
BstMBI	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
BstMWI	GCNNNNNNNGC	6 cut(s)	167, 430, 470, 608, 1018, 1342
BstNI	CCWGG	5 cut(s)	82, 185, 386, 1129, 1403
BstNSI	RCATGY	3 cut(s)	530, 1327, 1438
BstPI	GGTNACC	1 cut(s)	363
BstSCI	CCNGG	6 cut(s)	80, 183, 359, 384, 1127, 1401
BstSFI	CTRYAG	3 cut(s)	557, 696, 1182
BstSLI	GKGCMC	2 cut(s)	665, 1167
BstUI	CGCG	2 cut(s)	155, 1485
BstV1I	GCAGC	5 cut(s)	103, 388, 457, 903, 1440
BstX2I	RGATCY	2 cut(s)	519, 1552
BstXI	CCANNNNNNTGG	1 cut(s)	636
BstYI	RGATCY	2 cut(s)	519, 1552
Bsu36I	CCTNAGG	1 cut(s)	399
BsuI	GTATCC	2 cut(s)	173, 416
BsuRI	GGCC	6 cut(s)	42, 389, 578, 663, 1401, 1500
BtgI	CCRYGG	2 cut(s)	37, 277
BtgZI	GCGATG	1 cut(s)	170
BtrI	CACGTC	1 cut(s)	1316
BtsCI	GGATG	6 cut(s)	32, 108, 202, 330, 802, 1137
BtsI	GCAGTG	1 cut(s)	806
BtsIMutI	CAGTG	3 cut(s)	351, 772, 806
Cac8I	GCNNGC	4 cut(s)	500, 576, 1272, 1347
CaiI	CAGNNNCTG	1 cut(s)	897
CciI	TCATGA	2 cut(s)	1027, 1393
CfoI	GCGC	2 cut(s)	155, 464
Cfr10I	RCCGGY	1 cut(s)	1345
Cfr13I	GGNCC	6 cut(s)	41, 84, 436, 661, 662, 1498
Csp6I	GTAC	4 cut(s)	818, 1138, 1174, 1295
CviQI	GTAC	4 cut(s)	818, 1138, 1174, 1295
DdeI	CTNAG	3 cut(s)	399, 465, 1365
DpnI	GATC	8 cut(s)	243, 521, 1188, 1215, 1263, 1554, 1575, 1601
DpnII	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
DriI	GACNNNNNGTC	1 cut(s)	1568
EaeI	YGGCCR	1 cut(s)	387
Eam1104I	CTCTTC	2 cut(s)	119, 411
Eam1105I	GACNNNNNGTC	1 cut(s)	1568
EarI	CTCTTC	2 cut(s)	119, 411
EciI	GGCGGA	1 cut(s)	176
Eco130I	CCWWGG	2 cut(s)	277, 1609
Eco147I	AGGCCT	1 cut(s)	1401
Eco24I	GRGCYC	1 cut(s)	665
Eco31I	GGTCTC	1 cut(s)	1586
Eco47I	GGWCC	2 cut(s)	84, 436
Eco47III	AGCGCT	1 cut(s)	463
Eco57I	CTGAAG	2 cut(s)	45, 748
Eco81I	CCTNAGG	1 cut(s)	399
Eco88I	CYCGRG	2 cut(s)	708, 1050
Eco91I	GGTNACC	1 cut(s)	363
EcoO109I	RGGNCCY	3 cut(s)	661, 662, 1498
EcoO65I	GGTNACC	1 cut(s)	363
EcoRI	GAATTC	1 cut(s)	1304
EcoRII	CCWGG	5 cut(s)	80, 183, 384, 1127, 1401
EcoT14I	CCWWGG	2 cut(s)	277, 1609
EcoT22I	ATGCAT	1 cut(s)	349
EcoT38I	GRGCYC	1 cut(s)	665
ErhI	CCWWGG	2 cut(s)	277, 1609
FaqI	GGGAC	1 cut(s)	1479
FauI	CCCGC	1 cut(s)	1005
Fnu4HI	GCNGC	5 cut(s)	92, 377, 471, 892, 1454
FokI	GGATG	6 cut(s)	19, 95, 209, 337, 789, 1144
FriOI	GRGCYC	1 cut(s)	665
Fsp4HI	GCNGC	5 cut(s)	92, 377, 471, 892, 1454
FspBI	CTAG	6 cut(s)	104, 176, 506, 743, 1145, 1371
GlaI	GCGC	2 cut(s)	154, 463
GluI	GCNGC	5 cut(s)	92, 377, 471, 892, 1454
GsuI	CTGGAG	2 cut(s)	206, 1111
HaeII	RGCGCY	1 cut(s)	465
HaeIII	GGCC	6 cut(s)	42, 389, 578, 663, 1401, 1500
HapII	CCGG	4 cut(s)	213, 360, 368, 1346
HhaI	GCGC	2 cut(s)	155, 464
Hin6I	GCGC	2 cut(s)	153, 462
HinP1I	GCGC	2 cut(s)	153, 462
HincII	GTYRAC	2 cut(s)	100, 259
HindII	GTYRAC	2 cut(s)	100, 259
HpaI	GTTAAC	1 cut(s)	100
HpaII	CCGG	4 cut(s)	213, 360, 368, 1346
HphI	GGTGA	4 cut(s)	357, 740, 1027, 1292
Hpy166II	GTNNAC	3 cut(s)	100, 236, 259
Hpy188I	TCNGA	5 cut(s)	76, 208, 287, 1199, 1562
Hpy188III	TCNNGA	8 cut(s)	126, 268, 710, 898, 1028, 1050, 1394, 1588
Hpy8I	GTNNAC	3 cut(s)	100, 236, 259
HpyAV	CCTTC	9 cut(s)	19, 69, 332, 634, 730, 826, 984, 1241, 1391
HpyCH4III	ACNGT	2 cut(s)	88, 355
HpyCH4IV	ACGT	6 cut(s)	232, 261, 291, 635, 1005, 1315
HpyF10VI	GCNNNNNNNGC	6 cut(s)	167, 430, 470, 608, 1018, 1342
HpyF3I	CTNAG	3 cut(s)	399, 465, 1365
HpySE526I	ACGT	6 cut(s)	232, 261, 291, 635, 1005, 1315
HspAI	GCGC	2 cut(s)	153, 462
KroI	GCCGGC	1 cut(s)	1345
KroNI	GCCGGC	1 cut(s)	1347
KspAI	GTTAAC	1 cut(s)	100
Kzo9I	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
LmnI	GCTCC	1 cut(s)	679
Lsp1109I	GCAGC	5 cut(s)	103, 388, 457, 903, 1440
LweI	GCATC	4 cut(s)	315, 855, 898, 1122
MaeI	CTAG	6 cut(s)	104, 176, 506, 743, 1145, 1371
MaeII	ACGT	6 cut(s)	232, 261, 291, 635, 1005, 1315
MaeIII	GTNAC	4 cut(s)	355, 363, 508, 1280
MalI	GATC	8 cut(s)	243, 521, 1188, 1215, 1263, 1554, 1575, 1601
MbiI	CCGCTC	1 cut(s)	1012
MboI	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
MflI	RGATCY	2 cut(s)	519, 1552
MhlI	GDGCHC	2 cut(s)	665, 1167
MlsI	TGGCCA	1 cut(s)	389
MluCI	AATT	8 cut(s)	8, 171, 547, 594, 667, 877, 1304, 1426
MluNI	TGGCCA	1 cut(s)	389
MlyI	GAGTC	5 cut(s)	197, 231, 700, 1040, 1461
MmeI	TCCRAC	2 cut(s)	99, 547
Mox20I	TGGCCA	1 cut(s)	389
Mph1103I	ATGCAT	1 cut(s)	349
MroNI	GCCGGC	1 cut(s)	1345
MroXI	GAANNNNTTC	1 cut(s)	1479
MscI	TGGCCA	1 cut(s)	389
MseI	TTAA	6 cut(s)	5, 18, 99, 543, 597, 654
MslI	CAYNNNNRTG	1 cut(s)	634
Msp20I	TGGCCA	1 cut(s)	389
MspA1I	CMGCKG	2 cut(s)	379, 1118
MspI	CCGG	4 cut(s)	213, 360, 368, 1346
MspR9I	CCNGG	6 cut(s)	82, 185, 361, 386, 1129, 1403
MvaI	CCWGG	5 cut(s)	82, 185, 386, 1129, 1403
MvnI	CGCG	2 cut(s)	155, 1485
MwoI	GCNNNNNNNGC	6 cut(s)	167, 430, 470, 608, 1018, 1342
NaeI	GCCGGC	1 cut(s)	1347
NciI	CCSGG	1 cut(s)	361
NcoI	CCATGG	1 cut(s)	277
NdeII	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
NgoMIV	GCCGGC	1 cut(s)	1345
NlaIV	GGNNCC	4 cut(s)	438, 663, 664, 1499
NmuCI	GTSAC	2 cut(s)	363, 1280
NsiI	ATGCAT	1 cut(s)	349
NspI	RCATGY	3 cut(s)	530, 1327, 1438
OliI	CACNNNNGTG	1 cut(s)	634
PaeR7I	CTCGAG	1 cut(s)	708
PagI	TCATGA	2 cut(s)	1027, 1393
PceI	AGGCCT	1 cut(s)	1401
PciI	ACATGT	1 cut(s)	526
PcsI	WCGNNNNNNNCGW	1 cut(s)	246
PdiI	GCCGGC	1 cut(s)	1347
PdmI	GAANNNNTTC	1 cut(s)	1479
PfeI	GAWTC	5 cut(s)	209, 715, 944, 1024, 1525
PflMI	CCANNNNNTGG	1 cut(s)	529
PfoI	TCCNGGA	1 cut(s)	1127
PkrI	GCNGC	5 cut(s)	93, 378, 472, 893, 1455
PleI	GAGTC	5 cut(s)	196, 231, 700, 1039, 1461
PpsI	GAGTC	5 cut(s)	196, 231, 700, 1039, 1461
PscI	ACATGT	1 cut(s)	526
PsiI	TTATAA	2 cut(s)	1353, 1618
Psp1406I	AACGTT	1 cut(s)	261
Psp6I	CCWGG	5 cut(s)	80, 183, 384, 1127, 1401
PspEI	GGTNACC	1 cut(s)	363
PspGI	CCWGG	5 cut(s)	80, 183, 384, 1127, 1401
PspN4I	GGNNCC	4 cut(s)	438, 663, 664, 1499
PspOMI	GGGCCC	1 cut(s)	661
PspPI	GGNCC	6 cut(s)	41, 84, 436, 661, 662, 1498
PstNI	CAGNNNCTG	1 cut(s)	897
PsuI	RGATCY	2 cut(s)	519, 1552
PvuII	CAGCTG	1 cut(s)	379
RsaI	GTAC	4 cut(s)	819, 1139, 1175, 1296
RsaNI	GTAC	4 cut(s)	818, 1138, 1174, 1295
RseI	CAYNNNNRTG	1 cut(s)	634
SaqAI	TTAA	6 cut(s)	5, 18, 99, 543, 597, 654
SatI	GCNGC	5 cut(s)	92, 377, 471, 892, 1454
Sau3AI	GATC	8 cut(s)	241, 519, 1186, 1213, 1261, 1552, 1573, 1599
Sau96I	GGNCC	6 cut(s)	41, 84, 436, 661, 662, 1498
ScaI	AGTACT	2 cut(s)	1175, 1296
SchI	GAGTC	5 cut(s)	197, 231, 700, 1040, 1461
ScrFI	CCNGG	6 cut(s)	82, 185, 361, 386, 1129, 1403
SduI	GDGCHC	2 cut(s)	665, 1167
SfaNI	GCATC	4 cut(s)	315, 855, 898, 1122
SfcI	CTRYAG	3 cut(s)	557, 696, 1182
Sfr274I	CTCGAG	1 cut(s)	708
SinI	GGWCC	2 cut(s)	84, 436
SlaI	CTCGAG	1 cut(s)	708
SmiMI	CAYNNNNRTG	1 cut(s)	634
SmlI	CTYRAG	2 cut(s)	708, 812
SmoI	CTYRAG	2 cut(s)	708, 812
SpeI	ACTAGT	1 cut(s)	505
Sse9I	AATT	8 cut(s)	8, 171, 547, 594, 667, 877, 1304, 1426
SseBI	AGGCCT	1 cut(s)	1401
SsiI	CCGC	3 cut(s)	161, 1012, 1116
SspMI	CTAG	6 cut(s)	104, 176, 506, 743, 1145, 1371
StuI	AGGCCT	1 cut(s)	1401
StyD4I	CCNGG	6 cut(s)	80, 183, 359, 384, 1127, 1401
StyI	CCWWGG	2 cut(s)	277, 1609
TaaI	ACNGT	2 cut(s)	88, 355
TaiI	ACGT	6 cut(s)	235, 264, 294, 638, 1008, 1318
TaqI	TCGA	8 cut(s)	125, 240, 709, 1216, 1264, 1328, 1572, 1598
TaqII	GACCGA	1 cut(s)	1531
TasI	AATT	8 cut(s)	8, 171, 547, 594, 667, 877, 1304, 1426
TatI	WGTACW	2 cut(s)	1173, 1294
TfiI	GAWTC	5 cut(s)	209, 715, 944, 1024, 1525
Tru1I	TTAA	6 cut(s)	5, 18, 99, 543, 597, 654
Tru9I	TTAA	6 cut(s)	5, 18, 99, 543, 597, 654
TscAI	CASTG	3 cut(s)	358, 772, 813
TseFI	GTSAC	2 cut(s)	363, 1280
TseI	GCWGC	5 cut(s)	91, 376, 470, 891, 1453
Tsp45I	GTSAC	2 cut(s)	363, 1280
TspDTI	ATGAA	7 cut(s)	213, 606, 791, 1016, 1218, 1382, 1410
TspRI	CASTG	3 cut(s)	358, 772, 813
Van91I	CCANNNNNTGG	1 cut(s)	529
VpaK11BI	GGWCC	2 cut(s)	84, 436
XapI	RAATTY	3 cut(s)	547, 1304, 1426
XceI	RCATGY	3 cut(s)	530, 1327, 1438
XhoI	CTCGAG	1 cut(s)	708
XmnI	GAANNNNTTC	1 cut(s)	1479
XspI	CTAG	6 cut(s)	104, 176, 506, 743, 1145, 1371
ZrmI	AGTACT	2 cut(s)	1175, 1296
Zsp2I	ATGCAT	1 cut(s)	349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.